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Matrix 3208 of Study 2068

About Citation title: "Phylogenetic placement of the enigmatic parasite, Polypodium hydriforme, within the Phylum Cnidaria".
About This study was previously identified under the legacy study ID S2067 (Status: Published).

Matrices

Title: 18S 28S Combined

Description: Legacy TreeBASE Matrix ID = M3870

Rows

Taxon Label Row Segments Characters 1?–30
Abietinaria filicula 91608  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Adelopora crassilabrum ALst51  (none) ------------------------------
Agalma elegans AY937313  (none) --------------AGTCATATGCTTGTCT
Aglaophenia tubiformis 81766  (none) -----------AGTAGTCATATGCTTGTCT
Amphiporus sp. AF119077  (none) ----------------TCATATGCTTGTCT
Amphisbetia minima 91629  (none) ------------------------------
Anthohebella parasitica 85034  (none) -TGATCCTGCCAGTAGTCATATGCTTGTCT
Antipathes galapagensis  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Apolemia sp. CWD101 AY937331  (none) --------------AGTCATATGCTTGTCT
Atolla vanhoeffeni AF100942  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Aurelia spEphyra AGC170 18S  (none) ------------------------------
Balano sp.  (none) ------------------------------
Beroe ovata AF293694  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Bimeria vestita 92014  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Bougainvillia carolinensis 91705  (none) ----------CAGTAGTCATATGC-TGTCT
Brinckmannia hexactinellidophila 92074  (none) ---ATCCTGCCAGTAGTCATATGCTTGTCT
Caenorhabditis elegans X03680  (none) TTGATTCTGTCAGC-GCGATATGCTCAAGT
Candelabrum cocksii AY920758  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Candida albicans  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Carybdea rastonii AF358108  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Catostylus sp.  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Cephalodiscus gracilis  (none) ------------------------------
Chironex fleckeri AF358104  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Chiropsalmus sp AF358103  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Chordodes morgani  (none) ----------------AAGCTTGCTTGTCT
Chrysaora melanaster AF358099  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Cladocoryne floccosa 92247  (none) ------------------------------
Clava multicornis 91965  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Clavactinia gallensis 96191  (none) -TGATCCTGCCAGTAGTCATATGCTTGTCT
Clytia noliformis 92240  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Cordagalma cordiforme AY937317  (none) --------------AGTCATATGCTTGTCT
Cordylophora caspia 92133  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Corydendrium sp 92000  (none) ------------------------------
Craterolophus convolvulus AY845344  (none) --------------AGTCATATGCTTGTCT
Crypthelia cryptotrema ALst11  (none) ----------------------TGCTTGTC
Darwin carybdeid sp AF358105  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Diclidophora denticulata  (none) -------------TAGTCATATGCTTGTCT
Dicoryne conybearei 92128  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Dipurena ophiogaster 92472  (none) ------------------------------
Ectopleura dumortieri 91691  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Eudendrium racemosum 85266  (none) ------------------------------
Euphysora bigelowi 92365  (none) ------------------------------
Fabienna sphaerica AY920767  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Garveia sp. AY920766  (none) -------------------TATGCTTGTCT
Halecium muricatum 82344  (none) ------------------------------
Haliclystus octoradiatus AY845346  (none) --------------AGTCATATGCTTGTCT
Haliclystus sanjuanensis AF358102  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Halistemma rubrum AY937358  (none) --------------AGTCATATGCTTGTCT
Halopteris minuta 91651  (none) -------------------------TGT{C
Harrimania sp.  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Hydra circumcincta AF358080  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Hydractinia symbiolongicarpus hysy  (none) ------------------------------
Hydrichthella epigorgia 92719  (none) ------------------------------
Hydrichthys boycei 92095  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Koellikerina fasciculate 92173  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Kudoa trifolia AM183300  (none) -------TGCCAGTGGTCATATGCTCGTCT
Kudoa unicapsula AM490334  (none) ------------------------------
Lepidopora microstylus ALst96  (none) ------------------------------
Leuckartiara octona 92078  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Leucosolenia sp AF100945  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Limnocnida tanganyicae AY920755  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Limulus polyphemus U91490  (none) --GATCCTGCCAGTAGTCATATGCTTGTTT
Lizzia blondina 92167  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Meara stichopi  (none) ----------------TGATATGCTCGTCT
Melicertum octocostatum AY920757  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Milnesium tardigradum U49909  (none) TTGATCCTGCCAGTAGTCATACGCTTGTCT
Mnemiopsis leidyi AF293700  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Moerisia sp AF358083  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Monosiga brevicollis AF084618  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Montastraea franksi  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Mucor racemosus  (none) TTGATCCTGCTTGTAGTCATATGCTTGTCT
Mycale fibrexilis  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Nanomia bijuga AY937338  (none) --------------AGTCATATGCTTGTCT
Nausithoe rubra AF358095  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Nectopyramis sp.  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Octophialucium indicum 82205  (none) ---GTCCTGCCAGTAGTCATATGCTTGTCT
Olindias phosphorica AY920753  (none) ---------CCAGTAGTCATATGCTTGTCT
Oncorhynchus kisutch AF030250  (none) --------------AG-CATATGCTTGTCT
Pachycordyle pusilla 92101  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Pandea sp. AY920765  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Parvicardium minimum DQ279942  (none) ----------------TTATATGCTTGTCT
Pennaria disticha AY920762  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Peripatus sp. AY210837  (none) --------------AGTCATACGCTCGTCT
Petromyzon marinus  (none) TTGATCCTGCCAGTAG-CATATGCTTGTCT
Phacellophora camtschatica AF358096  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Phascolopsis gouldii  (none) --------------AGTCATATGCTTGTCT
Phoronis vancouverensis  (none) --------------AGTCATATGCTTGTCT
Physophora hydrostatica AY937342  (none) --------------AGTCATATGCTTGTCT
Placopecten magellanicus X53899  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Pleurobrachia bachei AF293677  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Plumularia setacea 85056  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Podocoryne carnea AF358092  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Polypodium Russia Lindner  (none) TTGATCCTGCCAGTAGCGATATGCTCGTCT
Porpita sp AF358086  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Priapulus caudatus Z38009  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Proboscidactyla ornate 92017  (none) ---------------GTCATATGCTTGTCT
Proceraea cornuta  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Pruvotella grisea 91999T  (none) -----CCTGCCAGTAGTCATATGCTTGTCT
Pseudocrypthelia pachypoma ALst72  (none) ------------------------------
Ptychodera flava AF278681  (none) --------------AGTCATATGCTTGTCT
Pycnophyes sp. Tjarno AY859598  (none) --------------AGTCATATGCTTGTCT
Raja schmidt  (none) TTGATCCTGCCAGTAG-CATATGCTTGTCT
Ralpharia gorgoniae 92092  (none) ------------------------------
Rathkea octopunctata 92298  (none) ------------------------------
Rhizogeton nudus 91626  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Saccharomyces cerevisiae  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Saccoglossus kowalevskii  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Salpingoeca infusionum AF100941  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Scrippsia pacifica AF358091  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Solanderia ericopsis 85041  (none) ------------------------------
Stenostomum leucops  (none) ------------------------------
Strongylocentrotus purpuratus  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Styela plicata L12444  (none) TTGATCCTGCCAGTAGTGATATGCTTGTCT
Stylochus zebra AF342801  (none) --------------AGTCATATGCTTGTCT
Suberites ficus  (none) ATGATCCTGCCAGTAGTCATATGCTTGTCT
Sulculeolaria quadrivalvis AY937353  (none) --------------AGTCATATGCTTGTCT
Tenebrio molitor X07801  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Thalia democratica  (none) ------------------------------
Triakis semifasciata AF212180  (none) --------------AG-CATATGCTTGTCT
Tricholoma matsutake  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Tripedalia MND094  (none) ------------------------------
Turritopsis dohrnii 91981  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Urechis caupo AF342805  (none) --------------AGTCATATGCTTGTCT
Velella sp. AF358087  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Zanclea prolifera 92681  (none) ------------------------------
Zyzzyzus calderi 92083  (none) ------------------------------

Columns

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