#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 16, 2025; 22:15 GMT TreeBASE (cc) 1994-2008 Study reference: Wunsch M.J., & Bergstrom G. 2011. Genetic and morphological evidence that Phoma sclerotioides, causal agent of brown root rot of alfalfa, is composed of a species complex. Phytopathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10943] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=51; TAXLABELS Phoma_medicaginis_Pmed1NY Phoma_sclerotioides_SK7x12 Phoma_sclerotioides_var_Chz23x18r Phoma_sclerotioides_var_MNxJNLx1a Phoma_sclerotioides_var_champlainii_Chz1x15r Phoma_sclerotioides_var_champlainii_Chz1x7r Phoma_sclerotioides_var_champlainii_VT3x2x1x7r Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora Phoma_sclerotioides_var_macrospora_Chz7x25cr Phoma_sclerotioides_var_macrospora_ME1x2x8cr Phoma_sclerotioides_var_macrospora_Wyo18x1r Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus Phoma_sclerotioides_var_obscurus_CO7x2x10a Phoma_sclerotioides_var_obscurus_MT1x4x2 Phoma_sclerotioides_var_obscurus_MT6x5x10 Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 Phoma_sclerotioides_var_saskatchewanii_SK2x2 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9 Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides Phoma_sclerotioides_var_sclerotioides_Chz2x14cr Phoma_sclerotioides_var_sclerotioides_Chz7x2r Phoma_sclerotioides_var_sclerotioides_ME3x1x7r Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc Phoma_sclerotioides_var_sclerotioides_MT4x2x1 Phoma_sclerotioides_var_sclerotioides_SK2x1 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc Phoma_sclerotioides_var_sclerotioides_SK6x2 Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii Phoma_sclerotioides_var_steubenii_Chz10x18r Phoma_sclerotioides_var_steubenii_Chz12x30r Phoma_sclerotioides_var_steubenii_Chz1x16r Phoma_sclerotioides_var_steubenii_ME3x4x16cr Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc Phoma_sclerotioides_var_steubenii_NY1x2 Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis Phoma_sclerotioides_var_viridis_Chz12x22r Phoma_sclerotioides_var_viridis_Chz17x19Cr Phoma_sclerotioides_var_viridis_Chz1x30r Phoma_sclerotioides_var_viridis_Chz21x19cr_etc Phoma_sclerotioides_var_viridis_MT3x1x2 Phoma_sclerotioides_var_viridis_MT3x3x2a Phoma_sclerotioides_var_viridis_MT4x2x7 Phoma_sclerotioides_var_viridis_MT6x2x6 Phoma_sclerotioides_var_viridis_NH4x2x3x8r Phoma_sclerotioides_var_viridis_ON3x7 Phoma_sclerotioides_var_viridis_Q4x12st Phoma_sclerotioides_var_viridis_Q5x21st Phoma_sclerotioides_var_viridis_SK6x12 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M6882] TITLE HISchar; LINK TAXA = Taxa; DIMENSIONS NCHAR=516; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Phoma_medicaginis_Pmed1NY GCCTTGGTGTTGCCGTCGCAGTCTGCCTGCCGCCACCTCTGGCACGACCGCGTCTCTGCGCATTACCTCATCACACCCTCACCTCCACACTCGACTAACACACTACTGCAGGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCCGCTCGCAAGTCTGCACCATCAACCGGTGGTGTCAAGAAGCCTCACCGCTACAAGCCTGGTACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCTGCCATCGGCGCCCTTCAGGAGTCGGTCGAGGCCTACCTCGTCTCCCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATCCGTACGTCCTACCTTGACTTGATCTCATGATGATCACTCGCTAAC-TGTCTGCAGAGTCCAAGGATATCC Phoma_sclerotioides_SK7x12 GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATCAACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_Chz23x18r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACTACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_MNxJNLx1a GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACAA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_champlainii_Chz1x15r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTCGTCGCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_champlainii_Chz1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTCGTCGCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_champlainii_VT3x2x1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCTCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_Chz7x25cr GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---ACAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_ME1x2x8cr GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCTCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_Wyo18x1r GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGCCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACTGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_CO7x2x10a GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_MT1x4x2 GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACTGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_MT6x5x10 GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAATCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK2x2 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTT---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTT---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_Chz2x14cr GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_Chz7x2r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_ME3x1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCTAAGGATATCC Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCTAAGGATATCC Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_MT4x2x1 GCCTGCATCTCG---TCGCACGTCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK2x1 GCCTGCATCTCC---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAAC-CATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACC-GTCGACTA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK2x11_etc GCCTGCATCTCC---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAAC-CATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACC-GTCGACTA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK6x2 GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACTCATCAGTAACTTCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz10x18r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACACACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz12x30r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACACACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz1x16r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_ME3x4x16cr GCCTGCATCTCG---TCGCACGTCGC-TGTCGCCACC---GACATGCCTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCCACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc GCCTGCATCTCG---TCGCACGTCGC-TGTCGCCACC---GACATGCCTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCCACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_NY1x2 GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTTGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz12x22r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz17x19Cr GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz1x30r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCTACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCTTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz21x19cr_etc GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT3x1x2 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGACCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT3x3x2a GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GCC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT4x2x7 GCCTGCATCTT------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT6x2x6 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_NH4x2x3x8r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_ON3x7 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGATACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Q4x12st GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGATACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Q5x21st GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCTGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_SK6x12 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTTGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC ; END;