#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 09, 2025; 14:07 GMT TreeBASE (cc) 1994-2008 Study reference: Voigt K., Cozijnsen A., Kroymann J., Pöggeler S., & Howlett B. 2005. Phylogenetic relationships between members of the crucifer pathogenic Leptosphaeria maculans species complex as shown by mating type (MAT1-2), actin and beta tubulin sequences. Molecular Phylogenetics and Evolution, 37(2): 541-557. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1401] BEGIN TAXA; TITLE 'MAT1-2 AA 1'; DIMENSIONS NTAX=7; TAXLABELS Leptosphaeria_biglobosa__brassicae Leptosphaeria_biglobosa_australiensis Leptosphaeria_biglobosa_canadensis Leptosphaeria_biglobosa_erysimii Leptosphaeria_biglobosa_thlaspii Leptosphaeria_maculans_brassicae Leptosphaeria_maculans_lepidii ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2769] TITLE 'MAT1-2 AA 1'; LINK TAXA = 'MAT1-2 AA 1'; DIMENSIONS NCHAR=232; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 ] [ . . . . . . . . . . . . . . . . . . . . . . . ] Leptosphaeria_biglobosa__brassicae CWIIFRDAMHKKLKSENSDLTVQDISSRCSQLWRSLSESEKKPWQTAAENAKEEHSRQHPDYKYSPRKPGQKKKRQSRKAKQ---AAASAARNEMFNMQMAPETNMMASQMQLP--QFDYTIPATTTLGDIANSFVGETAYFN------------------------------------DPSEFIGVLPQEEQSTDAFHDAEALRHARLEEEF--EAGIDIGNTLHLDVING Leptosphaeria_biglobosa_australiensis CWIIFMDAMHKKLKSENPDLTVQDISSRCSQVWRSLSESEKKPWQTAAENAKEEHSRQHPDYKYSPRKPGQKKKRQSRKAKQ---AAASAVGTEIFNMPMAPETNMMASQLPLP--QFDYTIPATTTLGDITDSFVGEAAYFN------------------------------------DPAEFIGVLPEEEQSTDAFHDAEALRHARLAEEF--EAETDTGNTLHLDLINT Leptosphaeria_biglobosa_canadensis CWIIFRDAMHKKLKSEDSDLTVQDISSRCSQLWRSLSESEKKPWQTAAENAKEEHSRQHPDYKYSPRKPGQKKKRQSRKAKQ---AAASAARTEIFNMQMAPETNMMASQMQLP--QFDYTIPATTTLGDIADSFVGEAAFFN------------------------------------DPAEFIGVLPQEEQSMDAFHDAEALRHARLEEEF--EAGIETGNTLHLDVING Leptosphaeria_biglobosa_erysimii CWIIFRDAMAKKLKSEDADLSVQEISGRCSQVWRGLSEAEKKPWQTAAEHAKEEHFRQHPDYKYSPRKPGQKKKRQSRKAKQ---AAASAVGTEIFDMQMAPETNMMASQLPLP--QFDYTILATTTLSDITDSFVGEAAYFN------------------------------------DPAEFIGVLPQEEQSTDDFHDAEAVRHGRLEEEF--EAETETGNTLHLDIINT Leptosphaeria_biglobosa_thlaspii CWIIFRDAMQKRLKSEDPEISVQEISTRCSQLWHGLSPSEKTPWQAAAKNAKEEHSRQHPDYKYSPRKPGEKKKRQSRKAAKR--AAASAVDSEVFTLPMTPDISMMLSQMPLPEFQFNFTTPATTTIGDMANSFVSEAAFHK------------------------------------DPAEFIGTVPQDELSMGDFYDAETLRHARLRAEF--EA--GTDKDLDLGVNGD Leptosphaeria_maculans_brassicae CWIIFRDAMHKKLKSENPSLTVQQISTRCSEIWHAFSPDEKKVWQTAAKNAKEEHSRQHPDYKYSPRKPGEKKKRQSRKAKQCKYAAASTVNTEFFDVQMTPDSSMMQSQMPLPELRRNYSIPATTHHGDMAHSFVNETVDFNATVDFNGADDFN------GSVDFNCSGNFN------EPAEFNSNIPKEPFAINEFHDAEALRHALLSYEFGGEVEAEAEAFHQLDVAED Leptosphaeria_maculans_lepidii CWIIFRDAMHKKLKSEDPSLTVQQISTRCSEIWHAFSPDEKRVWQTAAKNAKEEHSRQHPDYKYSPRRPGEKKKRQSRKAKQRKHATASTVDTEVFDVQMTPDTSMMQ--MQLPGLQRNYSIPATTHLGDMAHPFVNEIADFDGAIDFNGAVDFNNAGDFNGSFDFNCSGNFNEVGDFNEPVEFTSNIPKEPFAINEFHDAEAPRHALLSDEF--EVEAEAEAFPQLDVAED ; END;