#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 12, 2025; 11:11 GMT TreeBASE (cc) 1994-2008 Study reference: Neinhuis C., Wanke S., Hilu K., Müller K., & Borsch T. 2005. Phylogeny of Aristolochiaceae based on parsimony, likelihood, and Bayesian analyses of trnL-trnF sequences. Plant Systematics and Evolution, 250: 7-26. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1415] BEGIN TAXA; TITLE Indels_included; DIMENSIONS NTAX=59; TAXLABELS Anemopsis_californica Aristolochia_albida Aristolochia_arborea Aristolochia_baetica Aristolochia_bracteolata Aristolochia_brasiliensis Aristolochia_californica Aristolochia_chilensis Aristolochia_elegans Aristolochia_eriantha Aristolochia_fimbriata Aristolochia_gigantea Aristolochia_grandiflora_A Aristolochia_grandiflora_B Aristolochia_macrantha Aristolochia_manshuriensis Aristolochia_parviflora Aristolochia_passifloraefolia Aristolochia_pentandra Aristolochia_pistolochia Aristolochia_pontica Aristolochia_reticulata Aristolochia_salvadorensis Aristolochia_serpentaria_A Aristolochia_serpentaria_B Aristolochia_serpentaria_C Aristolochia_tagala Aristolochia_tomentosa Aristolochia_tricaudata Aristolochia_westlandii Asarum_canadense Asarum_caudatum Asarum_cingchengense Asarum_yakusimense Calycanthus_fertilis Canella_winterana Drimys_lanceolata Drimys_winteri Gymnotheca_chinensis Holostylis_reniforme Houttuynia_cordata Lactoris_fernandeziana Liriodendron_tulipifera Magnolia_virginiana Pararistolochia_goldiana Pararistolochia_promissa Pararistolochia_triactina Peperomia_maypurensis Peperomia_pitcairnensis Piper_crocatum Piper_ornatum Piper_spec Pseudowintera_colorata Saruma_henryi Saururus_cernuus Saururus_chinensis Thottea_corymbosa Thottea_siliquosa Umbellularia_californica ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1529] TITLE Indel_Matrix; LINK TAXA = Indels_included; DIMENSIONS NCHAR=134; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 ] [ . . . . . . . . . . . . . ] Anemopsis_californica 10001111110111111111101101111011111000100010111111001001111111001110110111011111001100011001001111011101111011111110100111111110101111 Aristolochia_albida 10111111000111110101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110001111001111 Aristolochia_arborea 11111111110111111101111111111011110000100111111110001000110111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_baetica 10111111100111101101011111111011110000100111111110001000111101001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_bracteolata 10111110100111101101011111111011110000100111111110001000111111001110110111011111001100111000001111011011111111110010101110011110000111 Aristolochia_brasiliensis 10111101110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101110011110001111 Aristolochia_californica 11111111110111111101111111111011110000100111111110001010111111001110110111011111001100111000001111011001111111110010101110011010001111 Aristolochia_chilensis ??????0111011110110101111111101111000010011111110000100?111111001110110111011111001100111000001111011001111101110010101110011110001111 Aristolochia_elegans 10111001110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101100011110001111 Aristolochia_eriantha 10111101110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101100011110001111 Aristolochia_fimbriata 10111101110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101110011110001111 Aristolochia_gigantea 10111001110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101110011110001111 Aristolochia_grandiflora_A 10111101110111110101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_grandiflora_B 10111101110111110101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_macrantha 10111111110111101101011111111011110000100111111110001000111110001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_manshuriensis 11111111110101111101111111111011110000100111111110001000111111001100110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_parviflora ?0111111100111101101011111111011110000100111111110001000111101001110110111011111001100111000001111011001111110110000101110011110001111 Aristolochia_passifloraefolia 10111101110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101110011110001111 Aristolochia_pentandra 10111111110111101101011111111011110000100111111110001000111110001110110111011111001100111000001111011001011111110010101110011110001111 Aristolochia_pistolochia 10111111100111101101011111111011110000100111111110001000111001011110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_pontica 10111111100111101101011111111011110000100111111110001000111101001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_reticulata 11111111110111111101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_salvadorensis 11111111110111111101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_serpentaria_A 11111111110111111101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_serpentaria_B 11111111110111111101111111111011110000100111111110001000111111001100110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_serpentaria_C 11111111110111111101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_tagala ??????1110011110110101111111101111000010011111111000100?111111001110110111011111001100111000001111011001111111110010101110011110000111 Aristolochia_tomentosa 11111111110111111101111111111011110000100111111110001000111111001100110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_tricaudata 11111111110111111101111111111011110000100111111110001000111111001110110111011111001100111000001111011001111111110010101110011110001111 Aristolochia_westlandii 11111111110101111101111111111011110000100111111110001000111111001100110111011111001100111000001111011001111111110010101110011110001111 Asarum_canadense 10001111110111111101111111011011111000100110111011001001111111001110110111011111001100011000001111111101111111110110000110111110111111 Asarum_caudatum 10001111110111111101111111011011111000100110111011001001111111001110110111011111001100011000001111111101111111110110000110111110111111 Asarum_cingchengense 10001111110111111101111111011011111000000110111011001001111111001110110111011111001100011000001111111101111111110110000110111110111111 Asarum_yakusimense 10001111110111111101111111011011111000100110111011001001111111001110110111011111001100011000001111111101111111110110000110111110111111 Calycanthus_fertilis 10011111110111111??????????????????????????????111001001111111001111??0111011011101110011000011111010101111111010100110010111110101111 Canella_winterana 100111111101111101111111111110111110001001101111111010011111111????????????????1001101011000001111011101111111110110100110111110101111 Drimys_lanceolata 10011111110111111111111111111011111000100110011111001001111111001010110011011111001100011010001111011101111111110110100110111110101111 Drimys_winteri 10011111110111111111111111111011111000100110101111001001111111001010110011011111001100011010001111011101111111110110100110111110101111 Gymnotheca_chinensis 10011111110111111111101101111011111000100010111111001001111111001110110111011111001100011001001111011101111011111110100111111110101111 Holostylis_reniforme ?0111101110111101101011111111011110000100111111100001000111111001110110111011111001100111000001111011001111101110010101110011110001111 Houttuynia_cordata 10001111110111111111101101111011111000100010111111001001111111001110111111011111001000011001001110011101111011111110100111111110101111 Lactoris_fernandeziana 10010111110111011101111111111011111001100110111111001001111111001110010111011111000100011000001011011101110111110110100110111110111111 Liriodendron_tulipifera 10011111110111111111111111101011111000100110110111001001111111001110110111011111001100011000001111011101111111110100100110111110101111 Magnolia_virginiana 10011111110111111111111111101011111000100110110111001001111111001110110111011111001100011000001111011101111111110100100110111110101111 Pararistolochia_goldiana 10111111110111101101111111111011110000100111111110000000111111001110110111010111001100111000001111011001111111110011101110011100001111 Pararistolochia_promissa 10111111110111101101111111111011110000100111111110000000111111001110110111011111001100111000001111011001101111110011101110011100001111 Pararistolochia_triactina 10111111110111101101111111111011110000100111111110000000101111001110110111011111001100111000001111011001111111110011101110011100001111 Peperomia_maypurensis 000111111111111110111001111101000011101100001111110010010111110011101001110011010111000010??100101011101111011101110100111111110101100 Peperomia_pitcairnensis 000111111111111110111001111101001011001100101111110010010111110011101001110011010111000110??100101001101111011101110100111111110101100 Piper_crocatum 000111111111101111101011111111011010001100101111110010011111110011101101110111110111000110??100101011101111011101110100111111110101101 Piper_ornatum 000111111111101111101011111111011010001100101111110010011111110011101101110111110111000110??100101011101111011101110100111111110101101 Piper_spec 000111111111101111101011111111011010001100101111110010011111110011101101110111110111000110??100101011101111011101110100111111110101101 Pseudowintera_colorata 10011111110111111111111111111011111000100110101111001001111111001010110011011111001100011010001111011101111111110110100110111110101111 Saruma_henryi 10001111110111111101111111011011111000100110111011001001111111001110110111011111001100011000001111111101111111110110000110111110111111 Saururus_cernuus 10011111110111111111101100111011111000100010111111001001111111001110110110011111001100011001001111011101111011111110100111111110101111 Saururus_chinensis 10011111110111111111101100111011111000100010111111001001111111001110110110011111001100011001001111011101111011111110100111111110101011 Thottea_corymbosa 1011011101001111111111111111101111100010111?111110001100111111001110110111111110001100111100001111011101111111110010101110010110001111 Thottea_siliquosa 1011011101011111111111111111101111100010111?111110001100111111000110110101111110001100111000001111011100111111110010101110010110001111 Umbellularia_californica 10011111110111111111111011111011111000100110110111011001111111001111110111011111001100010000001111011101111111110110100110111110101111 ; END;