#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 19, 2025; 0:33 GMT TreeBASE (cc) 1994-2008 Study reference: Lian T., Guo W., Chen M., Li J., Liang Q., Liu F., Meng H., Xu B., Chen J., Zhang C., & Jiang L. 2015. Genome-wide identification and transcriptional analysis of folate metabolism-related genes in maize kernels. BMC Plant Biology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S17972] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=20; TAXLABELS Arabidopsis_thaliana_GCSH1 Arabidopsis_thaliana_GCSH2 Arabidopsis_thaliana_GCSH3 Escherichia_coli_GCSH__ Homo_sapiens_GCSH Mus_musculus_GCSH Oryza_sativa_GCSH Rattus_norvegicus_GCSH 'Rattus norvegicus GCSH-2' Saccharomyces_cerevisiae_GCSH Setaria_italica_GCSH1 Setaria_italica_GCSH2 Setaria_italica_GCSH3 Setaria_italica_GCSH4 Sorghum_bicolor_GCSH1 Sorghum_bicolor_GCSH2 Zea_mays_GCSH1 Zea_mays_GCSH2 Zea_mays_GCSH3 Zea_mays_GCSH4 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M32445] TITLE 'Folate metabolism-related genes in maize GDCH'; LINK TAXA = Taxa; DIMENSIONS NCHAR=177; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 ] [ . . . . . . . . . . . . . . . . . ] Arabidopsis_thaliana_GCSH1 MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH------------ Arabidopsis_thaliana_GCSH2 MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH--------------------- Arabidopsis_thaliana_GCSH3 MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH----------- Escherichia_coli_GCSH__ MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE------------------------------------------------ Homo_sapiens_GCSH MALRVVRSVRALLCTLRAVPSPAAPCPPRPWQLGVGAVRTLRTGPALLSVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE---- Mus_musculus_GCSH MSLQVSRSLRVVAYSLRTALTFCSPRPCVPSAAAVRSLRTGSALLSVRKFTEKHEWITTEEGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGALESVKAASELYSPLSGEVTEVNEALAENPGLVNKSCYEDGWLIKMTLSDPSEMDELMSEEAYEKYVKSIEE------- Oryza_sativa_GCSH MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDAH------------- Rattus_norvegicus_GCSH MSLRVVRSVRAVACSLRIALASCPPRPWAPSAAAVRSLRTGSALLSVRKFTEKHEWVTAKDGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGALESVKAASELYSPLSGEVTEVNEALAENPGLVNKSCYEDGWLIKMTLSDPSELDELMSEEAYEKYVKSIEE------- 'Rattus norvegicus GCSH-2' MSLRVVRSVRAVALQPALSPWPPCPPRPWRRALAAVRSLRTGSALLSVRKFTEKHEWVTAKDGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGGLESVKAASELYSPLSGEVTEVNEALPENPGLVNKSMYEDGWLIKMTLSDPSELDELMSEEAYEKYVKSN-------- Saccharomyces_cerevisiae_GCSH MLRTTRLWTTRMPTVSKLFLRNSSGNALNKNKLPFLYSSQGPQAVRYTSQHEWIAVHQDKTAFVGITKYATDALGDATYVELPEVGTEIAQGESLGSIESVKSASEIYQPADGTVEEINTNLEENPGVVNEDPMGDGWLVKMKLGEGVNVEQVEGLMSLEQYEKTLVHDD------- Setaria_italica_GCSH1 MALRLWASSAAKALKLSGARAVAPAFSISRFFSTVHDGLKYTHSHEWVKHHEDGVVTVGITDHAQSHLGEVVFVELPEAGAQVSAGGSFGNVESVKATSDVNSPISGEVVEVNSKLSETPGLINSSPYEDGWMIKVKPSSPGEADGLLDAAKYTKHCEEEDAH-------------- Setaria_italica_GCSH2 MAMAASSRLMWASRAAAYLRISTFPRAFSTVMKDLKYADTHEWVKVEGDSATVGITDHAQDHLGDVVYVELPEVGISVSQGKNFGAVESVKATSDINSPVSGEVVEVNEKLSEEPGLVNASPYDKGWIIKVKLSDSGELNSLMDDEKYSKFCEEEDNH------------------- Setaria_italica_GCSH3 MNIFVTVALLLPLQFVSHLMLCIFLVLTHFFPSVLKDLKYADTHEWVKVEDGSATIGITDHAQCYFWGFQDHLGDVVYVELPEVGNSVYQVKKFGAVERVKATSDINSPVSGEVVEVNGKLSEEPGLVNASSYDHGWIIKVKLSDSGELSSLMDDEKYLKFCEEEDKH--------- Setaria_italica_GCSH4 MEPPSGFWASLLSFLKFLPYSCGLLILGFIKARDWNFDSDGAFEGSSHSDCAFGDSDVMKDLKYADTHEWVKVEGDSATDHLGDVVYVELPEVDISVSQGKNFGAVESVKATSDINSPVSGEVVEVNEKLSEEPGLVNASPYDKGWIIKVKLSDSDNGGS----------------- Sorghum_bicolor_GCSH1 MALRLWASSAANALKLSGTAGACGASAAAPAFALSISRFFSTVHDGLKYTQSHEWVKTADGVATVGITDHAQDHLGEVVFVELPEPGTTVSAGASFGNVESVKATSDVNSPISGEVVEVNSKLSETPGLINTSPYEDGWMIKVKPSSPGEADVLLDAAKYTKHCEEEDAH------- Sorghum_bicolor_GCSH2 MAMAASSRLLWASRAAAYLRISTFPRAFSTVLKDLKYADTHEWVKVEGDSATVGITDHAQDHLGDVVYVELPEVGISVSQGKNFGAVESVKATSDINSPVSGEVVEVNNKLSEEPGLVNASPYEKGWIIKVKLSDSGELNSLMNDEKYSKFCEEEDNH------------------- Zea_mays_GCSH1 MALRMWASSAANALKLSAGGAGARAAAFSISRFFSTVHDGLKYTQSHEWVKTTGDVATVGITDHAQGHLGEVVFVELPEPGTKVAAGGPFGNVESVKATSDVNSPISGEVVEVNAKLSETPGLINTSPYEDGWMIKVKPSSPGEADALLDAAKYTKHCEEEDAH------------- Zea_mays_GCSH2 MAMAAASSRLFWASRAAAYLRISTFPRAFATVLKDLKYADTHEWVKVEGDSATVGITDHAQDHLGDVVFVELPEVGISVSQGKNFGAVESVKATSDINSPVSGEVVEVNEKLSEEPGLVNASPYEKGWIIKVKLSNSGDLNSLMDDDKYSKFCEEEDNH------------------ Zea_mays_GCSH3 MAMAAASRSRALWASRAAAYLRISTFPRAFSTVLKDLKYADTHEWVKVEGDSATVGITDHAQDHLGDVVYVELPEVGVSVSQGKNFGAVESVKATSDINSPVSGEVVEVNRKLSEEPGLVNASPYEKGWIIKVKLSDSGELSSLMDGDKYSKFCEEEDGH----------------- Zea_mays_GCSH4 MATSGGGWTGMQREREERGRDDQRNGGCLCGFPDHSSDAVYVELPEVGVSVSQGKNFGAVESVKATSDINLPVSGEVVEVNGKLSEEPGLVNASPYEKGWIIKVKLSDSGELSSLMDGDKYSKFCKEEDAGIPHLKWFGVEGQYNVMVIDLLGPSLKDLFNYCSRKFSLKTVLMLAD ; END;