#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on September 18, 2025; 21:24 GMT TreeBASE (cc) 1994-2008 Study reference: Linguiti G., Antonacci R., Tasco G., Grande F., Casadio R., Massari S., Castelli V., Consiglio A., Lefranc M., & Ciccarese S. 2016. Genomic and expression analyses of Tursiops truncatus T cell receptor gamma (TRG) and alpha/delta (TRA/TRD) loci reveal a similar basic public γδ repertoire in dolphin and human. BMC Genomics, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S19396] BEGIN TAXA; TITLE Untitled_Block_of_Taxa; DIMENSIONS NTAX=45; TAXLABELS Camelus_dromedarius_TRDV1S1_F Camelus_dromedarius_TRDV1S2_F Camelus_dromedarius_TRDV1S3_F Camelus_dromedarius_TRDV1S4_F Camelus_dromedarius_TRDV1S5_F Camelus_dromedarius_TRDV1S6_F Camelus_dromedarius_TRDV2S1_F Camelus_dromedarius_TRDV2S2_F Camelus_dromedarius_TRDV4_F Homo_sapiens_TRDV1_F Homo_sapiens_TRDV2_F Homo_sapiens_TRDV3_F Ovis_aries_TRDV1S1_F Ovis_aries_TRDV1S10_F Ovis_aries_TRDV1S11_F Ovis_aries_TRDV1S12_F Ovis_aries_TRDV1S13_F Ovis_aries_TRDV1S14_F Ovis_aries_TRDV1S2_F Ovis_aries_TRDV1S3_F Ovis_aries_TRDV1S4_P Ovis_aries_TRDV1S5_P Ovis_aries_TRDV1S6_F Ovis_aries_TRDV1S7_F Ovis_aries_TRDV1S8_P Ovis_aries_TRDV1S9_P Ovis_aries_TRDV2_F Ovis_aries_TRDV3_F Ovis_aries_TRDV4_F Ovis_aries_TRVD1S15_P Ovis_aries_TRVD1S16_F Ovis_aries_TRVD1S17_F Ovis_aries_TRVD1S18_F Ovis_aries_TRVD1S19_F Ovis_aries_TRVD1S20_F Ovis_aries_TRVD1S21_F Ovis_aries_TRVD1S22_F Ovis_aries_TRVD1S23_F Ovis_aries_TRVD1S24_F Ovis_aries_TRVD1S25_F Tursiops_truncatus_TRDV1_1_F Tursiops_truncatus_TRDV1_1D_F Tursiops_truncatus_TRDV1_1N_F Tursiops_truncatus_TRDV2_F Tursiops_truncatus_TRDV4_P ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M36819] TITLE Tursiops_truncatus_7B_al_TRDV; LINK TAXA = Untitled_Block_of_Taxa; DIMENSIONS NCHAR=417; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Camelus_dromedarius_TRDV1S1_F --------------GCCCAGACAGTTA--------------------CTCAAGACCAGCCAG---CCCTATCCTCTCACTTAGGGGAGTCA-GCCACCCTGAACTGTCAGTATGAAACAAGTTACA----------------------CCGAATACT-----------------------------ATATTTTTTGGTACAAG---------------------CAGCCT-CCCAGTGGAGAGATGACTTTCCTTATTCAACAGTATTCATCTAGCGGGAATGCA--AAGAGTGGCCGCTACTCTGT-AAAC--TTCAGGAAAGCAGAAAAATCCCTCAGC-------------CTCACCATCTCAAACTTACAGCTGAAGGATTCT------------------------------ Camelus_dromedarius_TRDV1S2_F --------------GCCCAGACAGTTA--------------------CTCAAGACCAGCCAG---CAGTATCCTCTCACGTAGGGCAGACA-GCCACCCTGAACTGTCAGTATGAAACAAGTTATA----------------------GCACATACT-----------------------------ATATTTTTTGGTACAAG---------------------CAGCCT-CCCAGTGGAGAGATGACTTTCCTTATTCGTCAAGAGTATAATCGCGGGAATGCA--AAGAGTGGCCGCTACTCTGT-AAAC--TTCAGGAAAGCAGAAAAATCCCTCAGC-------------CTCACCATCTCAAACTTACAGCTGGAGGATTCT------------------------------ Camelus_dromedarius_TRDV1S3_F --------------GCCCAGACAGTTA--------------------CACAAGACCAGCCAG---CCATATCCTCTCACGTAGGGGAGTCA-GCCACCCTGAACTGTCGGTATGAAACAAGTTATA----------------------GCACATACA-----------------------------ATATTGTTTGGTACAAG---------------------CAGCCT-CCCAGTGGAGAGATGACTTTCCTTATTCATCAGGGTTCATCTAGCGGGAATGCA--AAGAGTGGCCGCTACTCTAT-AAAC--TTCCGGAAAGCAGAAAAATCCCTCAGC-------------CTCACCATCTCAAACTTACAGCTGGAGGATTCTGCAAAGTACTTCTGTGCTTTCGATGGAAG- Camelus_dromedarius_TRDV1S4_F --------------GCCCAGACAGTTA--------------------CTCAAGACCAGCCAA---CAGTATCCTCTCACGTAGGGGAGACA-GCCACCCTGAACTGTCGGTATGAAACGAGTTGGA----------------------GCTACTACT-----------------------------ATATTGTTTGGTACAAG---------------------CAGCCT-CCGAGTGGAGAGATGACTTTCCTTATTCATCAGGATTCATCTAGCGGGAATGCA--AAGAGTGGCCGCTACTCTAT-AAAC--TTCAGGAAAGCAGAAAAATCCCTCAGC-------------CTCAGCATCTCAAACTTACAGCTGGAGGATTCT------------------------------ Camelus_dromedarius_TRDV1S5_F --------------GCCCAGACAGTTA--------------------CTCAAGACCAGCCAG---CAGTATCCTCTCACGTAGGGCAGACA-GCCACCCTGAACTGT-AGTATGAAACAAGTTATA----------------------GTACATACT-----------------------------ATATTGTTTGGTACAAG---------------------CAGCCT-CCGAGTGGAGAGATGACTTTCCTTATTCATCAGGATTCATCTAGCGGGAATGCA--AAGAGTGGCCGCTACTCTAT-AAAC--TTCAGGAAAGCAGAAAAATCCCTCAGC-------------CTCAGCATCTCAAACTTACAGCTGGAGGATTCT------------------------------ Camelus_dromedarius_TRDV1S6_F --------------GCCCAGACAGTTA--------------------CTCAAGACCAGCCAG---CCATATCCTCTCACGTGGGGGAGACA-GTCACCCTGAACTGTCGGTATGAAACAAGTGATA----------------------GCATATACT-----------------------------ATATTTTTTGGTACAAG---------------------CAGCCT-CCCAGTGGAGAGATGACTTTCCTTATTCATCAGGGTTCATCTAGCGGGAATGCA--AATAGAGGCCGCTACTCTGT-AAAC--TTCCGGAAAGCAGAAAAAGCCCTCAGC-------------CTCACCATCTCAAACTTACTGCTGAAAGATTCTGCAAAGTACTTCTGTGCTCTCAGAGAAGG- Camelus_dromedarius_TRDV2S1_F --------------GCTGCGAAAGTAA--------------------CCCAAACTCAGACCA---CAGAAACAGCACAAGAAGGACAAGCT-GTGACCATGCACTGCACGTATGAAACCTCAGCGC----------------------TGAGGTATA-----------------------------CTTTGTACTGGTACAAA---------------------CAGGGT-CCCAGCGGAGGGATGGCTTTCCTTATTTATCAGGATGACAATAAGGCAAACGCA--AAGCGGGATCGCTACTCTGT-GAAC--TTCCAAAAGGCAAAGCAATCCATCAGC-------------CTCACCATCTCATCTTCACAGCTGGCAGACTCAGGAAAGTACTTCTGTGCTCTC--------- Camelus_dromedarius_TRDV2S2_F --------------GCTGCGAAAGTAA--------------------CCCAAACTCAGACCA---CAGAAACAGCACAAGAAGGACAAGCT-GTGACCATGCACTGCACGTATGAAACCACAGCAC----------------------AGAGGTATA-----------------------------CTTTGTACTGGTACAAA---------------------CAGGGT-CCCAGTGGAAGGATGGCTTTTCTTATTTATCAGGATGACAATAAGGCAAGCGCA--AAGCGGGATCGCTACTCTGT-GAAC--TTCCAAAAGGCAAACCAATCCATCAGC-------------CTCACCATCTCATCTTCACAGCTGGCAGACTCAGGAAAGTACTTCTGTGCTCTC--------- Camelus_dromedarius_TRDV4_F --------------TCTGCCAAAGTGA--------------------CCCA-GACGTCCCGG---GACCAGACAGTGGCGAGTGGCAGTGAGGTGACATTGCCCTGCACTTTCGAAACCGAATACT-----------------------CAGATCCAG----------------------------ATTTATACTGGTACCGAATGAGGCCAGGTCTTTCTCTTGAGTTTGTCCTGTACAGGGATAACACT-------------GAATCCCTTAATGCGGATTTT--GCTCAGGGTAGATTTTCTGT-GCAG--CACAATGTGGCTCAGAAAACTTTCCAC-------------TTGGTGATGTCCTCAGTGAGGGCTGAAGACAGTGCCACTTACTACTGTGTTCTG--------- Homo_sapiens_TRDV1_F --------------GCCCAGAAGGTTA--------------------CTCAAGCCCAGTCAT---CAGTATCCATGCCAGTGAGGAAAGCA-GTCACCCTGAACTGCCTGTATGAAACAAGTTGGT----------------------GGTCATATT-----------------------------ATATTTTTTGGTACAAG---------------------CAACTT-CCCAGCAAAGAGATGATTTTCCTTATTCGCCAGGGTTCTGATGAACAGAATGCA--AAAAGTGGTCGCTATTCTGT-CAAC--TTCAAGAAAGCAGCGAAATCCGTCGCC-------------TTAACCATTTCAGCCTTACAGCTAGAAGATTCAGCAAAGTACTTTTGTGCTCTTGGGGAACT- Homo_sapiens_TRDV2_F -----------GCCATTGAGTTGGTGC--------------------CTGAACACCAAACAG------TGCCTGTGTCAATAGGGGTCCCT-GCCACCCTCAGGTGCTC-CATGAAAGGAGAAGCG------------------ATCGGTAACTACT-----------------------------ATATCAACTGGTACAGG---------------------AAGACC-CAAGGTAACACAATCACTTTCAT---------------ATACCGAGAAAAGGAC--ATCTATGGCCCTGGTTTCAA-AGACAATTTCCAAGGTGACATTGATATTGCAAAGAACCTGGCTGTACTTAAGATACTTGCACCATCAGAGAGAGATGAAGGGTCTTACTACTGTGC---CTGTGACACC Homo_sapiens_TRDV3_F --------------TGTGACAAAGTAA--------------------CCCAGAGTTCCCCGG---AC-CAGACGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATT-----------------------CAAATCCAG----------------------------ATTTATTCTGGTACCGGATAAGGCCAGATTATTCCTTTCAGTTTGTCTTTTATGGGGATAAC-----------AGCAGA--TCAGAAGGTGCAGATTTT--ACTCAAGGACGGTTTTCTGTGAAACACATTCTGA---CCCAGAAAGCCTTTCAC-------------TTGGTGATCTCTCCAGTAAGGACTGAAGACAGTGCCACTTACTACTGTGCCTTTAG------- Ovis_aries_TRDV1S1_F --------------------AAAGTTA--------------------CCCAAGACCAGCCAT---ACATAACCAGTCAAACAGGGCAATCT-GTCATTCTGAACTGTCGGTATGAAGTAAGTTGGA----------------GTGGGTACATGCACT-----------------------------ACCTTTTTTGGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTTCCTTATTCGTCAGGAATCTTCTGGCCCGAATGCA--AGGAATGGCCGCTACTCTGT-AAAC--TTTCAGAGAGCACAGAACACCATCAGC-------------CTCACCATTTCTGCCTTACAGTTGGAAGACTCCGCAAAGTACTTTTGTGCAGTCTGGGAACT- Ovis_aries_TRDV1S10_F --------------GCCCAGAGAGTTA--------------------CTCAAAACCAGCCAG---ACATTTCCACTCAAGTTGGGGAGATA-GTCACCCTCAGCTGTCGATATGAGACAGTTCAGA----------------------GCCATTATC-----------------------------ACATTTTTTGGTACAAA---------------------CAACTT-CCCAGTGGAGAGATGATTTACCTTATTGGTCATGATTCTTCTAGCCAGAATGCA--AGATATGGCCGTTACTCTGT-AAAT--TTTAAGATATCACGTAAATTCATCAGC-------------CTCACGATTTCAGACTTAGAGCTGGAAGACTCTGCAAAGTACTTCTGCACTCTCTGGGAACT- Ovis_aries_TRDV1S11_F --------------GCCCAGAAAGTTA--------------------CTCAAGACCAGCCAG---ACATATCCAGTCAAGTTGGGGAGTTA-GCCACCATGAACTGTCAGTATGAGACAAGTTGGA----------------------GCAGCTATA-----------------------------ACATTTTTTGGTATAAG---------------------CAACTT-CCCCGTGGAGAGCTGATTTACCTTATTGGTCAGAATTCTTATAGCCCGAATGCA--AGGGATGGCTGCTACTCTAT-AAAT--TTTCAGAGATCCCGTAAAGCCATCAAC-------------CTCATTATCTCAGCCTTAAAGCTGGAAGACTCTGCAAAGTACTTCTGTGCTCTCTGGGAACT- Ovis_aries_TRDV1S12_F --------------GCCCAGGAAGTTA--------------------CTCAAAACCGGCCAG---ATATATCCAGCCAAGTGGGGCAATCA-GTCACCCTGAATTGTCGGTATGAAACAAGCTGGA----------------------GCTATTACT-----------------------------ACCTTGTTTGGTACAAG---------------------CAACTT-CCCAGTGGACAGATAACTTACCTTATTCAACAGTATTCAGAAAACAGCAATGCA--AGGAACGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCAGATAAATCCATCAGC-------------CTCATCATTTCATCCTTACAGCTGGAAGACTCTGCAAAGTACTTCTGTGCTCTCCGTGACT-- Ovis_aries_TRDV1S13_F --------------------AAAGTTA--------------------CTCAAGACCAGCCAG---ACATAACCCGTCAAGTGGAGCAGTCA-GTCACTCTGAACTGTCTGTATGAAGTAAGTTGGT----------------ACATGGACGCCTACT-----------------------------CCATTTTTTGGTTCAAG---------------------CAGCTT-CCCAGGGGACAGATGATTTACCTCATTTGTCAGTATTCAGAAGATGGGAATGCA--AGGGACGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCAGATAAGTCCATCAGC-------------CTCACCATTTCAGCCTTACAGCTGGAAGATACTGCAAAGTACTTCTGTGCTCTCCGTGAACT- Ovis_aries_TRDV1S14_F --------------------AAAGTTA--------------------CTCAAGACCAACCAG---ACATAACCAGTCAAGTGGGGCAGTCA-GTGACTCTGAACTGTAAGTATGAAGTCAGTTGGT----------------ACAAGATCTCCTACT-----------------------------CCATTTTTTGGTACAAG---------------------CAGCTT-CCCAGTGGACAGATGACTTACCTCATTCGTCAGTATTCAGAAAATGCGAATGCA--AGGGACGGCCGCTACTCTGT-AAAT--TTCCAGAAAGCAGATAAGTCTATCAGC-------------CTTACCATTCCAGCCTTACAGCTAAAAGATACTGCAAAGTACTTCTGTGCTGTCA-------- Ovis_aries_TRDV1S2_F --------------------AATGTTA--------------------CTCAAAACCAGACAG---TCATAATCAGTCAAGTGGGGAAGATA-GTCACCCTTAACTGTCAGTATGAAATTAGCAGGA----------------ATGTACATGACTACT-----------------------------GGATTTTTTGGTACCAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTACCTCATTCATCAGTATTCAGAAGACAGGAATGAA--AGGGATGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCACGTAAATCCATCAGC-------------CTCACTATTTCATTCTTAAAACTGGAACATTCTGCAAAGTATTTCTGTGCTCTCTGGGTACA- Ovis_aries_TRDV1S3_F --------------GCCCAGAAAGTTA--------------------CTCAAAACCAGCCAG---ATATATCCAGCCAAGTGGGGCAATCA-GTCACCCTGAATTGTCGGTATGAAACAAGCTGGA----------------------GCTATTACT-----------------------------ACCTTGTTTGGTACAAG---------------------CAACTT-CCCAGTGGACAGATAACTTACCTTATTCAACAGTATTCAGAAAACAGCAATGCA--AGGAACGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCAGATAAATCCATCAGC-------------CTCATCATTTCATCCTTACAGCTGGAAGACTCTGCAAAGTACTTCTGTGCTCTCCGTGACT-- Ovis_aries_TRDV1S4_P --------------------CAAGTAA--------------------CTCAAGTCCAGACAG---CTGTACCCAGTCAAGTGGGGCAGACA-GTCACCCTGAATTGTTGATATGAAGTAAGTTGGA----------------CCACGGGCTTCTACT-----------------------------ACATTTTTTGGTATAAA---------------------CAGCTT-CCCAGGGGAGAGATGACTTTGCTTATTCGTCAGTATTCAGAACACGGTAATACA--AGGAATGGCCGCTACTCTGT-AAAC--TTCCTGAAAGCACATAAATCCATCAGC-------------CTCATCATTTCAGCCTTACAGCGCGAAGACTCTGCAAAGTACTTCTGTGCTCTCTGGGAGCT- Ovis_aries_TRDV1S5_P --------------GCGCAGAGAGTTA--------------------TTCAAGACCAGCCAG---ACATATCCGGTCAACTGGGACAGTTA-GTCACCCTGAACTGTCGGTATGCAACAACCTGGA----------------------GCTATTACT-----------------------------ACGTGTTTTGGTACAAG---------------------CTGCTT-CCCAGCGGAGAGATGATTTACCTTATTCATCAGGTTTCTTCTGGCCAGAATGCA--AAGAATGGCCGCTACTCTGT-AAAT--ATTCAGAAAGCTCAAAAATCCATCAGC-------------CTCACCATTTCAGATTTACAGCTGGAGGATTCTGCAGAGTATTTCTGTGCTTACACAAAAA-- Ovis_aries_TRDV1S6_F --------------------AAAGTTA--------------------CTCAATATCAGCCAG---ACATAACCAGTCAAGTGCGGAACGTA-GTCATCCTGAACTGTCGGTATGAAACAAGTTGGA----------------ACGTGTACACCTACT-----------------------------GGATATTTTGGTACAAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTACCTCATTCCTCAGTATTCAGAAGATGGGAATGAA--AGGGACGGCCACTACTCTGT-AAAC--TTTCAGAACGCACATAAGTTCATCAGC-------------CTCACCATTTCATCCTTAAAGCTGGAGCATTCTGGAAAATACTTCTGTGCTCTCTGGGAACG- Ovis_aries_TRDV1S7_F ----------------------------------------------------------------------------------------TCA-GTCACCCTGAATTGTCAGTATGAAACAAGCTGGACTGCTTACTACATTTTTTGGTACAAGCAACTTCCCAGTGGACAGATGACTTACCTTATTCACATTTTTTGGTACAAG---------------------CAGCTT-CCCAGTGGACAGATGACTTATCTTATTCGTCAGTATTCAGATGATGGGAATGCA--AGGGATGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCTCATAAGTCCATCAGC-------------CTCACCATTTCAGCCTTAGAGCTGGAAGATTCTGCAAAGTACTTCTGCATTCTCAGAGTAT-- Ovis_aries_TRDV1S8_P --------------CCCCAGAAAGTTA--------------------TTCAAGACCAACCAG---ACATATTCACTCAGATTGGAGAGGCA-GTCACTGTGAACTGTTGGTCTGAAACAAGTTGGA----------------------GCAGTTATA-----------------------------ATATTCTTTGGTATAAG---------------------CAACCT-CCCAGTGGAGAGATGAATTTCCTTA---------------------------CA--AGGGATGGCCACTACTCTAT-AAAT--TTTCAGAGATCATTTAAATCCTCCAGC-------------CTCACCATTTCAACCTTACAACTGGAAGATTCTGCAAAGTACTCCTGTGCTCTCTTTGAACT- Ovis_aries_TRDV1S9_P --------------GCCCAGAGAGTTA--------------------CTCAAGGCCAGCCAG---ACATTTCCACTCAAGTTAGGGAGATA-GTCACCCTGAGCTGTCGATATGAGACAGATCACA----------------------GCCATTACA-----------------------------AAATTTTTTGGTATAAA---------------------CAACTT-CCCAGTGGAGAGATGATTTACCTTATTGGTCAAGATTCTTCTAGCCAAAATGCA--AGGTATGGCCGCTACTCCGT-AAAT--TTTAAGATATCACGTAAATTCATCAGC-------------CTCACGATTTCAGACTTAGAGCTGGAAGACTCTGCAAAGTACTTC------------------ Ovis_aries_TRDV2_F --------------GCTGACAAAGTGA--------------------CCCAAGCTCAGACTA---CCGTAACAGGGCAGGAAAGAGAAGCT-GTGACCATAGGCTGCACGTATGAAACCTCTCAGA----------------------CTTATTATA-----------------------------CTTTGTTTTGGTACAGA---------------------CAGTTT-CCCGGTGGAAGGATGGAATTCCTTATCTATCAGGATAGTAATCAAGCAAATGCA--AGGAGGGATCGCTACTCTGT-AAAC--TTTCAAAAGGGAAAAAAAATCATCAGC-------------CTCACCATCTCTTCCTTGCACCTGGCTGACTCAGCGAAGTATTTCTGTGCTCTCTGGGAATAC Ovis_aries_TRDV3_F --------GACAATGTTGAGAGCGCT--------------------------GATGTACCTA---CAGTGTATAAAAAAGAGGGGGAATCT-GTGACCGTGGAATGCAAGTTCTCAGTCAGCTATA----------------------CATACTATA-----------------------------TGATGTACTGGTATCGA---------------------CAGCCT-TCCAGCGGAGAGATGATTTACATGATTAATATTTATTCTCAAAGCAAGCAGACA--AGGGAAGGACGATACTCTGT-GGAA--TTTTACAAACCCAACCAAATGCTGAAA-------------CTCACCATCTCAGCCTTGACGCTGAGTGACTCGGCCGTCTATTTCTGTGGTGTCAGAGAGTTC Ovis_aries_TRDV4_F --------------TGTAACCAAGTGA--------------------CCCAGAGCTCCCCGG--AGCAGAGAGTGGCAAGTGGCCGAGAG--GTGACACTGCAGTGCACCTTCCAAACCACATATT-----------------------CAAATCCAG----------------------------ACTTATACTGGTACCGAAAGACGCCAGATGCTGTCTTCCAGTTTGTCCTGTACAGGGACAACACT-------------AGATCCCGTGATGCGGATTTT--GCTCGGGGTAGATTTACTGT-GCAG--CATAGCGTGAGAAGCAAAACCTTCCAC-------------TTGGTGATCTCCTCTGTGAGGCCTGAAGACACTGCCACTTACTACTGTGCTTT--GGAGCTCC Ovis_aries_TRVD1S15_P --------------GCCCAGAAAGTTA--------------------TTCAAGACCAGCCAG---ACATATCCAGTCAAGTTGGGGAGTCA-GCCACCATGAACTGTCAGTATGAGACAAGTTGGA----------------------GAAGTTATA-----------------------------ACAGTTTTTAGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGATTTACCTTATCGGCCAGAATTCTTATAGCCCAAATGCA--AGGGATGGCCGCTACTCCAT-AAAT--TATCAGAGATCCCGTAAAGCCATCAGC-------------CTCATTATCTCAGCCTTATAGCTGGAAGACTCTGCAAAGTACTTTTGTGCTCTCTGGGAACT- Ovis_aries_TRVD1S16_F --------------GCCCAGAAAGTTA--------------------CTCAAGACCAGTCAG---ATGTATCCAGCCAAGTGGGGCAGTCA-GTCACCCTGAATTGTCAGTATGAAACAAGCTGGA----------------------GCTATTACA-----------------------------ACCTTTTTTGGTACAAG---------------------CAACTT-CCCAGTGGACAGATGACTTACGTTATTCGTCAGAGTTCATTAGTCACGAATGCA--ACGAAAGACCGCTACTCGAT-AAAC--TTTAAGAAAGCGGATAAATCCATCAGC-------------CTCACCATTTCAGCCT----------------------------------------------- Ovis_aries_TRVD1S17_F --------------GCGCAGAGAGTTA--------------------TTCAAGACCAGCCAG---ACATATCTGGTCAACTGGGACAGTCA-GTCACCCTGAACTGTCGGTATGGAACAACGTGGA----------------------GCTATTACT-----------------------------ACGTGTTTTGGTACAAG---------------------CTGCTT-CCCAATGGAGAGATGATTTACCTTATTCATCAGGTTTCTTCTGGCCAGAATGCA--AGGAATGGCCGCTACTCTGT-AAAT--TTTCAGAAAGCTCGTAAATCCATCAGC-------------CTCACCATCTCAGATTTACAGCTGGAAGACTCTGCAGAGTATTTCTGTGCTCTCTGGGAGCT- Ovis_aries_TRVD1S18_F --------------GCCCAGAGAGTTA--------------------CTCAAGACCAGCCAG---ACATTTCCAGTCAAGTTGGGGAGGTA-GTCACACTGAGCTGTCGATATGAGACAATTCAGA----------------------GCCGTTACA-----------------------------ACATTTTTTGGTACAAA---------------------CAACTT-CCCAGTGGAGAGATGATTTACCTTATTGGTCATGATTCTTCTAGCCAGAATGCA--AGATATGGCCGTTACTCTGT-AAAT--TTTAAGATATCACGTAAATTCATCAGC-------------CTCACGATTTCAGACTTAGAGCTGGAAGACTCTGCAAAGTACTTCTGCACTCTCTGGGAACT- Ovis_aries_TRVD1S19_F --------------GCCCAGAAAGTTA--------------------CTCAAGACCAGCCAG---ATATATCCAGCCAAGTGGGGCAGTCA-GTCACCCTGAACTGTCGGTATGAAACAAGCTGGA----------------------GAGTTTACT-----------------------------ATCTCTTTTGGTACAAG---------------------CAACTT-CCCAGTGGACAGATGACTTACCTTATTCAACAGTATTCAGGATACAGCAATGCA--AGGAATGGCCGCTACTCTGT-AAAC--TTTAAGAAAGCAGATAAATCCATCAGC-------------CTCATCATTTCATCCTTACAGCTGGAAGATTCTGCAAAGTACTTCTGTGCTCTCTGTGACT-- Ovis_aries_TRVD1S20_F --------------------AGTGTTA--------------------CTCAAGACCAGCCAG---ACATACTCAGTGAAGTGGGGAAGACA-ATCACGCTGAACTGTCGGTATGAAACAAGTTGGG----------------ACATGTTGAGCTACT-----------------------------ACATTTTTTGGTACAAG---------------------CAGCTT-CCCAGTGGAAAGATGACTTATCTTATTCGTCAGCATTCAGATGATGGGAATGCA--AGGGACGGCCGCTACTCTGT-AAAC--TTCCAGAAAGCTCATAAGTCCATCAGC-------------CTCACCATTTCAGCCTTAGAGCTGGAAGATTCTGCAAAGTACTTCTGCATTCTCAGAGTAT-- Ovis_aries_TRVD1S21_F --------------GCCCAGAAAGTTA--------------------TTCAAGATCAACCAG---ACATATTCACTCAGATTGGAGAGGCA-GTCACCATGAACTGTCTGTGTGAAACAAGTTGGA----------------------GCAGTTACA-----------------------------ACATTTTTTGGTATAAG---------------------CAACCC-CCCAGTGGAGAGATGATTTTCCTTA---------------------------CA--AGGGATGGCCACTACTCTAT-AAAC--TTTCAGAGATCATGTAAATCCTCCAGC-------------CTCACCATTTCAACCTTACAACTGGAAGATTCTGCAAAGTACTCCTCTGCTCTCTTTGAATT- Ovis_aries_TRVD1S22_F --------------GCCCAGAGAGTTA--------------------CTCAAGACCAGCCAG---ACATTTCCAGTCAAGTTGGGGAGGTA-GTCACACTGAGCTGTCGATATGAGACAATTCAGA----------------------GCCGTTACA-----------------------------ACATTTTTTGGTACAAA---------------------CAACTT-CCCAGTGGAGAGATGATTTACCTTATTGGTCAGGGTTCTTCCAGCCAGAATGCA--AGGTATGGCCGCTACTCTGT-GAAT--TTACAGAGATCACGTAAATCCATCAGC-------------CTCACGATTTCAGACTTAGAGCTGGAAGACTCTGCAAAGTACTTCTGCGCTCTCTGGGAACT- Ovis_aries_TRVD1S23_F --------------GCCCAGAAAGTTA--------------------CTCAAGACCAGCCAG---ACATAGCCAGTCAAGTTGGGGAGTCA-GCTGCCATGAACTGTCAGTATGAGACAAGTCGGA----------------------ACAGTTATA-----------------------------ACATTTTTTGGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGATTTACCTTATTGGTCAGAATTCTTACAGCCCGAATGCA--AGGGATGGCCGCTACTCCAT-AAAT--TTTCTGAGATCCCTTAAAGCCATCAGC-------------CTCATTATCTCAGCCTTAAAGCTGGAAGACTCGGCAAAGTACTTCTGTGCTCTCTGGGAACT- Ovis_aries_TRVD1S24_F -----------GTAGCCCAGAAAGTTA--------------------TTCAAGACCCGCCAG---ACATATCCAATCGAACTGGGGAATCA-GTTACCCTAAATTGTCGGTATGAAACAAGCCAGA----------------------GCCGTTACA--------------------------------TTTTTTGGTACAAG---------------------CACCTT-CCCAGTGGAGAGATGATTTTCCTTA---------------------------CA--AAGGATGGCCGCTTCTCTAT-ACAT--TTTGACAGAGTACATAAATCCTCCAGC-------------CTCACCATTTCAACCTTACAATTGGAAGATTCTGCAAAGTACTTCTGCGCTCTCTGGGAACT- Ovis_aries_TRVD1S25_F --------------GCCCAGAAAGTTA--------------------CTCAAGACCAGCCAG---ATATATCCAGCCAAGTGGGGCAGTCA-GTCACCCTGAACTGTCGGTATGAAACAAGCTGGA----------------------GAGTTTACT-----------------------------ATCTTTTTTGGTACAAG---------------------CAACTT-CCCAGTGGACAGATGACTTATGTTATTCGTCAGGGTTCAGAAATGACAAACGCA--AGGAAAGACCGCTACTCTGT-AAAC--TTTAAGAAAGCAGATAAATCCATCAGC-------------CTCATCATTTCATCCTTACAGCTGGAAGATTCTGCAAAGTACTTCTGTGCTCTCCGTGAACT- Tursiops_truncatus_TRDV1_1_F ---GATTTGGTGCGGCCCAGAAAGTTA--------------------CTCAAGTCCAGCGAG---CCATGTCCAGTCAGCTAGGGGAGGCG-GTCACCTTGAGCTGTCAGTATGAAACAAGCTTGA----------------------GCTGGTACG-----------------------------ATATTTTTTGGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTTCCTTATTCATCAGAGTTCTTCTGGCCAAAATGCA--AAGAATGGCCGCTATTCTGT-AAAC--TTTCAGGAAAGACATAAATTCATCAGC-------------CTCACCATTTCAGGCTTACTGGTGGAAGATTCTGCAAACTACTTCTGTGCTCTCTGGAACT-- Tursiops_truncatus_TRDV1_1D_F ---GATTTGGTGCGGTCCAGAAAGTTA--------------------CTCAAGTCCAGCCAG---CCATATCCAGTCAGCTAGGGGAGGCG-GTCACCTTGAGCTGTCAGTATGAAACAAGCTTGA----------------------GCTGGTACG-----------------------------TTATTGTTTGGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTTCCTTATTCATCAGATTTCTTCTGACCAAAATGCA--AAGAATGGCCGCTATTCTGT-AAAC--TTTCAGAAAAGACATAAATTCATCAGC-------------CTCACCATTTCAGCCTTACTGGTGGAAGATTCTGCAAACTACTTCTGTGCTCTCTGGGACCT- Tursiops_truncatus_TRDV1_1N_F ---GATTTGGTGCGGCCCAGAAAGTTA--------------------CTCAACTCCAGCCAG---CCATATCCAGTCAGCTAGGGGAGGCG-GTCACCTTGAGCTGTCAGTATGAAACAAGCTTGA----------------------GCTGGTACG-----------------------------TTATTGTTTGGTATAAG---------------------CAGCTT-CCCAGTGGAGAGATGACTTTCCTTATTCATCAGATTTCTTCTGACCAAAATGCA--AAGAATGGCCGCTATTCTGT-AAAC--TTTCAGAAAAGACATAAATTCATCAGC-------------CTCACCATTTCAGGCTTACTGGTGGAAGATTCTGCAAACTACTTCTGTGCTCTCCGGGAACT- Tursiops_truncatus_TRDV2_F ---------------------GAGTCATGTCAGCTGTCACGTTGGGCCTCAAAACCAAGCAAGGAGTGTGTCT------GTGGGGGAATCT-GTCACCCTCAGGTGCTC-CATGAAAGGAGACTCC------------------ATCAGTAACTACT-----------------------------ATACCTTCTGGTACAGG---------------------AAAACA-CCGGGTAACACAATGACTC-----------------TCATATACCGAGAAGGGGGCACATATGGCCCTGGTTTCGA-AGACAACTTCCAAGGTGAAATTGATCTTTCAAACAACCAGGCTGTGCTGAATATCCTGGAGGCATCAGAGAGAGATGAAGGATCTTACTACTGTGCCTC----GACCAC Tursiops_truncatus_TRDV4_P ACAAGGACGTGCTGTGTAACCAAGTGA--------------------CCCA-GATTTCCCAG---GAGCAGATACTGGTGAGTGGCAGTGAGGTGACACTACAATGCATTTTCCAAACCACATACT-----------------------TAGATCCAG----------------------------TCTTATACTGGTACCAAATAAGACCAGATCGTTCCTTCTAGTTTGTCCTGCACAGGAATAACATT-------------AAATCCCATGATGCGGATCTT--GCTCGGGGTAGATTTTCCGT-GCAG--CACAGCCTGACCCACAAAACCTTCCAC-------------TTGGTGATCTCCTCAGTGAGGCCTGAAGACAGTGCCACTTACTACTGTGGCTTGCGGTCC--- ; END;