#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 09, 2025; 20:10 GMT TreeBASE (cc) 1994-2008 Study reference: Light J., & Reed D. 2008. Multigene analysis of phylogenetic relationships and divergence times of primate sucking lice (Phthiraptera: Anoplura). Molecular Phylogenetics and Evolution, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S2199] BEGIN TAXA; TITLE EF1; DIMENSIONS NTAX=12; TAXLABELS Fahrenholzia_pinnata Fahrenholzia_reducta Pedicinus_badii Pediculus_humanus_capitis_20 Pediculus_humanus_capitis_23 Pediculus_humanus_capitis_25 Pediculus_humanus_capitis_3 Pediculus_humanus_humanus_1 Pediculus_humanus_humanus_3 Pediculus_schaeffi Pthirus_gorillae Pthirus_pubis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3382] TITLE EF1; LINK TAXA = EF1; DIMENSIONS NCHAR=345; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Fahrenholzia_pinnata AAGAACGTGTCCGTGAAGGAATTGCGCCGTGGATACGTTGCAGGCGACTCGAAGAACAACCCTCCGAAGGCCGCTGCTGACTTCCTTGCTCAGGTCATTGTGTTGAACCATCCCGGACAGATTTCAAACGGCTACACGCCCGTCTTAGATTGCCACACGGCCCACATAGCATGCAAATTTGCGGAAATTAAGGAGAAATGCGACCGCCGTACCGGAAAGACCACCGAGGAGAACCCGAAGAGCATCAAGTCCGGAGACGCCGCCATCGTGAATTTGGTGCCGTCTAAGCCAATGTGCGTCGAGTCTTTCTCCGAATTTCCTCCACTCGGCCGTTTCGCCGTACGT Fahrenholzia_reducta AAGAACGTATCTGTGAAGGAATTACGTCGTGGATACGTTGCCGGCGATTCTAAGAACAACCCTCCGAAAGCCGCTGCTGACTTCCTTGCTCAGGTCATTGTCTTGAATCATCCTGGACAGATTTCAAACGGCTACACGCCCGTCTTAGATTGCCACACGGCCCACATAGCTTGCAAATTTGCCGAAATTAAGGAGAAATGCGACCGTCGTACGGGCAAGACTACCGAGGAGAATCCGAAGAGCATAAAGTCCGGAGACGCCGCCATCGTTAATTTGGTTCCGTCTAAACCAATGTGCGTCGAGTCTTTCTCCGAATTTCCTCCTCTCGGTCGTTTCGCCGTCCGT Pedicinus_badii AAAAATGTTTCCGTTAAAGAATTGCGTCGTGGATATGTAGCAGGTGACTCAAAGAACAATCCACCAAAGGCTGCTGCTGACTTCCTTGCACAGGTTATTGTTTTGAACCACCCAGGACAGATTTCAAACGGTTATACACCCGTATTAGATTGCCACACGGCCCATATAGCTTGCAAGTTTGCTGAAATTAAAGAAAAATGTGACCGTCGTACTGGAAAAACAACTGAGGAAAATCCGAAGAGCATTAAATGTGGAGACGCTGCCATTGTTAACTTGGTTCCGTCTAAGCCTATGTGCGTAGAATCTTTCTCCGAATTCCCTCCTCTTGGTCGTTTTGCTGTTCGT Pediculus_humanus_capitis_20 AAAAACGTTTCCGTAAAAGAATTGCGACGTGGATACGTTGTTGGTGACGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTCCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAAACAACCGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATCGTTAACTTGGTTCCATCTAAATCCATGTGTGTTGAATCTTTCTCCGAATTTTCCACA--------------------- Pediculus_humanus_capitis_23 AAAAACGTTTCCGTAAAAGAATTGCGACGTGGATACGTTGTTGGTGACGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTCCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAAACAACCGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATCGTTAACTTGGTTCCATCTAAATCCATGTGTGTTGAATCTTTCTCCGAATTTCCGCA---------------------- Pediculus_humanus_capitis_25 AAAAACGTTTCCGTAAAAGAATTGCGACGTGGATACGTTGTTGGTGACGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTCCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAAACAACCGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATCGTTAACTTGGTTCCATCTAAATCCATGTGTGTTGAATCTTTCTCCGAATTTCCGCA---------------------- Pediculus_humanus_capitis_3 AAAAACGTTTCCGTAAAAGAATTGCGACGTGGATACGTTGTTGGTGACGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTCCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAAACAACCGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATCGTTAACTTGGTTCCATCTAAATCCATGTGTGTTGAATCTTTCTCCGAATTTCCGCA---------------------- Pediculus_humanus_humanus_1 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Pediculus_humanus_humanus_3 AAAAACGTTTCCGTAAAAGAATTGCGACGTGGATACGTTGTTGGCGACGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTCCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAAACAACCGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATCGTTAACTTGGTTCCATCTAAATCCATGTGTGTTGAATCTTTCTCCGAATTTCCGCCTCTAGGTCGTTTTGCCGTTCGT Pediculus_schaeffi AAAAACGTTTCTGTAAAAGAATTGCGTCGTGGATACGTTGCCGGCGATGCTAAAAATAATCCACCAAAAGCTGCAGCTGATTTTCTTGCTCAGGTCATTGTGCTAAATCACCCTGGACAAATATCAAACGGATATACTCCCGTATTAGATTGTCATACGGCTCACATAGCCTGTAAATTTGCTGAAATCAAAGAGAAATGTGACCGTCGTACAGGAAAGACAACTGAAGAAAATCCCAAGAGCATTAAAACAGGAGATGCAGCCATTGTTAATTTGGTTCCATCTAAACCCATGTGTGTTGAATCTTTCTCCGAATTTCCGCCTCTAGGTCGTTTTGCCGTTCGT Pthirus_gorillae AAAAACGTTTCCGTCAAGGAATTGCGTCGTGGATATGTTGCTGGTGATTCTAAGAACAATCCACCAAAAGCAGCTGCTGATTTCTTAGCTCAAGTTATTGTGCTAAATCACCCAGGACAAATTTCAAATGGATATACTCCCGTATTAGATTGTCACACGGCTCACATAGCCTGTAAATTCGCTGAAATTAAAGAAAAATGTGACCGTCGTACAGGAAAAACTACTGAAGAAAACCCCAAGAGCATTAAGACAGGAGATGCAGCCATTGTTAGTTTGGTTCCATCTAAGCCCATGTGCGTTGAGTCTTTCTCCGAGTTTCCGCCTCTTGGTCGTTTCGCTGTTCGT Pthirus_pubis AAAAACGTTTCCGTCAAGGAATTGCGTCGTGGCTATGTTGCTGGTGATTCTAAGAACAATCCACCAAAAGCAGCTGCTGATTTCTTAGCTCAAGTTATTGTGCTAAATCACCCAGGACAAATTTCAAATGGATATACTCCCGTATTAGATTGTCACACGGCTCACATAGCCTGTAAATTCGCTGAAATTAAAGAAAAATGTGACCGTCGTACAGGAAAAACTACTGAAGAAAACCCCAAGAGCATTAAGACAGGAGATGCAGCCATTGTTAGTTTGGTTCCATCTAAGCCCATGTGCGTTGAGTCTTTCTCCGAGTTTCCGCCTCTTGGTCGTTTCGCTGTTCGT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = EF1) = N: 1-345; CODONPOSSET CodonPositions (CHARACTERS = EF1) = N: 1-345; END;