#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 09, 2025; 16:22 GMT

TreeBASE (cc) 1994-2008

Study reference:
Davis W.J., Amses K.R., Smith M.E., Spatafora J.W., Stajich J.E., & James T.Y. 2018.
Phylogenomic analysis reveals a monophyletic Zoopagales (Zoopagomycota, Fungi)
with predacious taxa evolving from mycoparasite ancestors. Molecular Phylogenetics
and Evolution, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S22698]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=46;
        TAXLABELS
            Acaulopage_tetraceros
            Allomyces_macrogynus
            Arthrobotrys_oligospora
            Basidiobolus_heterosporus
            Basidiobolus_meristosporus
            Capsaspora_owczarzaki
            Catenaria_anguillulae
            Cochlonema_odontosperma
            Coemansia_reversa
            Conidiobolus_coronatus
            Conidiobolus_thromboides
            Coprinopsis_cinerea
            Dimargaris_cristalligena
            Drosophila_melanogaster
            Gonapodya_prolifera
            Hesseltinella_vesiculosa
            Lichtheimia_hyalospora
            Linderina_pennispora
            Martensiomyces_pterosporus
            Monosiga_brevicollis
            Mortierella_elongata
            Neurospora_crassa
            Pandora_formicae
            Phycomyces_blakesleeanus
            Piptocephalis_cylindrospora
            Ramicandelaber_brevisporus
            Rhizoclosmatium_globosum
            Rhizophagus_irregularis
            Rhizopus_delemar
            Rozella_allomycis
            Saccharomyces_cerevisciae
            Schizosaccharomyces_pombe
            Smittium_culicis
            Smittium_mucronatum
            Spizellomyces_punctatus
            Stylopage_hadra
            Syncephalis_fuscata
            Syncephalis_plumigaleata
            Syncephalis_pseudoplumigaleata
            Thamnocephalis_sphaerospora
            Umbellopsis_ramanniana
            Ustilago_maydis
            Zancudomyces_culisetae
            Zoopage_sp
            Zoophagus_insidians
            Zoothphora_radicans
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M51069]

	TITLE Zoopagales_Trophic_Lifestyles;
	LINK TAXA = Taxa;
	DIMENSIONS NCHAR=1;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7" MISSING=? GAP= -;
	CHARSTATELABELS
		1  Trophic_State / saprotroph multitrophic microorganism_parasite microorganism_predator mycoparasite insect_pathogen insect_commensal plant_mutualist,
		;

MATRIX
Acaulopage_tetraceros              3
Allomyces_macrogynus               0
Arthrobotrys_oligospora            1
Basidiobolus_heterosporus          1
Basidiobolus_meristosporus         1
Capsaspora_owczarzaki              3
Catenaria_anguillulae              1
Cochlonema_odontosperma            2
Coemansia_reversa                  0
Conidiobolus_coronatus             1
Conidiobolus_thromboides           1
Coprinopsis_cinerea                0
Dimargaris_cristalligena           4
Drosophila_melanogaster            0
Gonapodya_prolifera                0
Hesseltinella_vesiculosa           0
Lichtheimia_hyalospora             0
Linderina_pennispora               0
Martensiomyces_pterosporus         0
Monosiga_brevicollis               3
Mortierella_elongata               0
Neurospora_crassa                  0
Pandora_formicae                   5
Phycomyces_blakesleeanus           0
Piptocephalis_cylindrospora        4
Ramicandelaber_brevisporus         0
Rhizoclosmatium_globosum           0
Rhizophagus_irregularis            7
Rhizopus_delemar                   1
Rozella_allomycis                  4
Saccharomyces_cerevisciae          0
Schizosaccharomyces_pombe          0
Smittium_culicis                   6
Smittium_mucronatum                6
Spizellomyces_punctatus            0
Stylopage_hadra                    3
Syncephalis_fuscata                4
Syncephalis_plumigaleata           4
Syncephalis_pseudoplumigaleata     4
Thamnocephalis_sphaerospora        4
Umbellopsis_ramanniana             0
Ustilago_maydis                    1
Zancudomyces_culisetae             6
Zoopage_sp                         3
Zoophagus_insidians                3
Zoothphora_radicans                5
;
END;