#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 12, 2025; 9:08 GMT

TreeBASE (cc) 1994-2008

Study reference:
Tsutsumi C., Yatabe Y., Hirayama Y., Chiou W., & Kato M. 2021. Molecular analyses
of the disjunctly distributed Osmunda regalis and O. japonica (Osmundaceae), with
particular reference to introgression and hybridization. Plant Systematics and
Evolution, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S26988]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=12;
        TAXLABELS
            Claytosmunda_claytoniana_CL1CL2
            Osmunda_japonica_J12J3J4J5
            Osmunda_japonica_J6J7J8
            Osmunda_lancea_L1aL3
            Osmunda_lancea_L1bL2
            Osmunda_regalis_R10
            Osmunda_regalis_R11R12
            Osmunda_regalis_R13R14R15R16R17R18
            Osmunda_regalis_R1R3
            Osmunda_regalis_R2R4
            Osmunda_regalis_R5R6R7R8R9
            Plenasium_banksiifolium
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M56331]

	TITLE Osmundaceae_L58;
	LINK TAXA = Taxa;
	DIMENSIONS NCHAR=198;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                              10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190        ]
[                                               .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .        ]
Claytosmunda_claytoniana_CL1CL2        TCACAAAGGTTGATCTAAGCACAACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCTGAAGGTACGCTTGATGAGAATATGGTTATTGTATTGGCTCGTTCTTCGCTTTT-TCTACATAGATTGATGATATTAGTTTGTAACATGTTTGCCAATATTAAA
Osmunda_japonica_J12J3J4J5             TCACAAAGGTCGATGTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCATTTCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTTGTCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_japonica_J6J7J8                TCACAAAGGTTGATGTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCATTTCAAAGAATGGCCCACCCAGAAGGTACGCTTAATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTTGTCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_lancea_L1aL3                   TCACAAAGGTTGATGTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCATTTCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTTGTCTGAATAGATTGATGAAATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_lancea_L1bL2                   TCACAAAGGTTGATGTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCATTTCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTTGTCTAAATAGATTGATGAAATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_regalis_R10                    TCACAAAGGTTGATCTTAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTGGTTTTT-TCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_regalis_R11R12                 TCACAAAGGTTGATCTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTGGTTTTT-TCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAC
Osmunda_regalis_R13R14R15R16R17R18     TCACAAAGGTTGATCTAAGCACAACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACGGCATTTCAGAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCATTTTT-TCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_regalis_R1R3                   TCACAAAGGTTGATTTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTT-TCTAAATAGATTTATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_regalis_R2R4                   TCACAAAGGTTGATCTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTT-TCTAAATAGATTTATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Osmunda_regalis_R5R6R7R8R9             TCACAAAGGTTGATCTAAGCACCACTGTTTTGGGATTCAAGATTTCCATGCCCATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTATTGGCTCGTTCTTCGTTTTT-TCTAAATAGATTGATGATATCAGTTTATAACATGCTTGCCAATATTAAA
Plenasium_banksiifolium                TCTCAAAGGTTGATCTAAGCACAACTGTTTTGGGATTCAAGATTTCCATGCCTATCATGGTTGCACCTACAGCAATGCAAAGAATGGCCCACCCAGAAGGTACGCTTGATGATAATATGGTTATTGTAT-GGCTGGTTGTTCGTTTTT--CTAAATAGATTGACGATATCAGTTCATAACATATTTTCCAATATTAAA
;
END;