#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on July 12, 2025; 20:51 GMT TreeBASE (cc) 1994-2008 Study reference: Tsutsumi C., Yatabe Y., Hirayama Y., Chiou W., & Kato M. 2021. Molecular analyses of the disjunctly distributed Osmunda regalis and O. japonica (Osmundaceae), with particular reference to introgression and hybridization. Plant Systematics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S26988] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=17; TAXLABELS Claytosmunda_claytoniana_CL1a Claytosmunda_claytoniana_CL1b Claytosmunda_claytoniana_CL2 Osmunda_japonica_J1J3J5 Osmunda_japonica_J2 Osmunda_japonica_J4J6J7J8 Osmunda_lancea_L1 Osmunda_lancea_L2L3 Osmunda_regalis_R10 Osmunda_regalis_R11R12 Osmunda_regalis_R13 Osmunda_regalis_R14 Osmunda_regalis_R15R17R18 Osmunda_regalis_R1R4 Osmunda_regalis_R2R3 Osmunda_regalis_R5R6R7R8R9 Plenasium_banksiifolium ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M56337] TITLE Osmundaceae_L258; LINK TAXA = Taxa; DIMENSIONS NCHAR=353; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Claytosmunda_claytoniana_CL1a AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGTGTTTTCATGTATTTCGAAGGTATGGAGTCTCAAATTCTGGAGTAAGCCCTTTCTTGGATATTTACAATATGTCACTGGTCTACCGCGATAGATTTTACCAGGGAGTTTCTTTATGTTATTTTATCACAGGTTTCTGTACAACATTCCCCC-TTTTAACCTCTTTTGACCTGGGTCTAGAACGATGAATGTTATAGATACAGTGAGTGCACTGTGTTATATTGTTGCATCAGAGACTTGCTAGACCTATC----ATTTTACGCCCCTGCTTCTGATTTCTGATTATTGCTGCAGATAA Claytosmunda_claytoniana_CL1b AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGTGTTTTCATGTATTTCGAAGGTATGGAGTCTCAAATTCTGGAGTAAGCCCTTTCTTGCATATTTACAATATGTCACTGGTCTACCGCGACAGATTTCACCAGGGAGTTTCTTTATGTTATTTTATCACAGGTTTCTGTACAACATTCCCCC-TTTTAGCCTCTTTTGACCTGGGTCTAGAACGATGAATGTTATAGATACAGTGAGTGCACTGTGTTATATTGTTGCATCAGAGACTTGCTAGACCTATC----ATTTTACGCCCCTGCTTCTGATTTCTGATTATTGCTGCAGATAA Claytosmunda_claytoniana_CL2 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGTGTTTTCATGTACTTCGAAGGTATGGAGTCTCAAATTCTGGAGTAAGCCCTTTCTTGGATATTTACAATATGTCACTGGTCTACCGCGATAGATTTCACCAGGGAGTTTCTTTATGTTATTTTATCACAGGTTTCTGTACAACATTCCCCC-TTTTAACCTCTTTTGAGCTGGATCTAGAACGATGAATGGTATAGATACAGTGAGTGGACTGTGTTATATTGTTGCATCAGAGACTTGCTGGACCTATC----ATTTTACGCCCCTGCTTCTGATTTCTGATTATTGCTGCAGATAA Osmunda_japonica_J1J3J5 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATCCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_japonica_J2 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATCCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTTCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTCGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_japonica_J4J6J7J8 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATCCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTTCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGTTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_lancea_L1 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATCCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTCTAACCTCTTC-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_lancea_L2L3 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATCCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTGTCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGAGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R10 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGGGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCATTGGTCTACCGTGATAGATTTTACTCGGGGGTTT--------------GTCACAAGTTTCT---CACTATTCGCC-TTTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCATAAATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R11R12 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCATTGGTCTACCGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CACTATTCGCC-TTTTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCCGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R13 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTCAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CAAATTTCCC----TTTAACCTCTTT-GACCTAGGTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R14 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGTGTTTTCATGTATTTCGAAGGTATGGAGTCTTCAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCAC--------CGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CAAATTTCCC----TTTAACCTCTTT-GACCTAGGTCTAGCACGATGAACGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R15R17R18 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCACTGGTCTACCGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTGGGTGTAGAACGATGAATGGTATGGATACAGTGAGAGGACTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACCTAGCAGAGATTTGCGGACCCCTCTTCTGATTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R1R4 AAGTGATGCCTGCTGTGATTGTTCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCATTGGTCTACCGTGATAGATTTTACTAGGGGGTTT--------------GTCACAAGTTTCT---CACTATTCGCC-TTTTTAACCTCTTT-GACCTAGTTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R2R3 AAGTGATGCCTGCTGTGATTGTTCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCATTGGTCTACCGTGATAGATTTTACTAGGGG-TTT--------------GTCACAAGTTTCT---CACTATTCGCC-TTTTTAACCTCTTT-GACCTAGTTCTAGCACGATGAATGGTATGGATACAGTGAGAGGGCTGTGTTATATTGTCGCAGCAGAGACTTGCTGGACATAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Osmunda_regalis_R5R6R7R8R9 AAGTGATGCCTGCTGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGCGTTTTCATGTATTTCGAAGGTATGGAGTCTTAAATTCTGGAGTAAGCCATTTCTT---------AAACATGTCACTGGTCTACCGTGATAGATTTTGCCAGGGGGTTT--------------GTCACAAGTTTCT---CACAATTCCCCC-TTTTAACCTCTTT-GACCTGGGTCTAGAACGATGAATGGTACGGATACAGTGAGAGGCCTGTGTTATATTGTTGCAGCAGAGACTTGCTGGACCTAGCAGAGATTTGCTGACCCCTCTTCTGGTTTCTGATCGTTGCTGCAGATAA Plenasium_banksiifolium AAGTGATGCCTGCCGTGATTGTGCGCCAGCGCAAACCTTGGAGAAGAAAGGATGGTGTTTTCATGTATTTCGAAGGTATGGAGTCTCAAATTCTGCAGTAAACTCTTTCTTGGATATTTACAATATGTCACTGA-----CGTGATAGATTTTATTAGGTAGTTTATTTATGTTATTTT-TCATAAGTTCCTGTACAACATTCCCCCTTTTTAACCTCTTTTGACCTT--------------AATGGTATGGATATAGTGACTGGACTGTGTTATATTGCTGTATCAGAGACTTGCTTGACCTATC----ATTTTACGCCCCTGCTTCTGATTTCTGATTGTTGCTGCAGATAA ; END;