#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on July 09, 2025; 13:36 GMT

TreeBASE (cc) 1994-2008

Study reference:
Myllys L., Stenroos S., Thell A., & Ahti T. 2003. Phylogeny of bipolar Cladonia arbuscula
and Cladonia mitis (Lecanorales, Euascomycetes). Molecular Phylogenetics
and Evolution, 27(1): 58-69.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S939]

BEGIN TAXA;
        TITLE  TaxonLabelSet11006;
        DIMENSIONS NTAX=30;
        TAXLABELS
            Cladonia_arbuscula_202
            Cladonia_arbuscula_212
            Cladonia_arbuscula_215
            Cladonia_arbuscula_5122
            Cladonia_arbuscula_5124
            Cladonia_arbuscula_5300
            Cladonia_arbuscula_5323
            Cladonia_arbuscula_5372
            Cladonia_arbuscula_5429
            Cladonia_arbuscula_5471
            Cladonia_arbuscula_5536
            Cladonia_arbuscula_5537
            Cladonia_arbuscula_57095
            Cladonia_arbuscula_57256
            Cladonia_arbuscula_9910
            Cladonia_mitis_201
            Cladonia_mitis_216
            Cladonia_mitis_217
            Cladonia_mitis_218
            Cladonia_mitis_5304
            Cladonia_mitis_5339
            Cladonia_mitis_5376
            Cladonia_mitis_5381
            Cladonia_mitis_5500
            Cladonia_mitis_5501
            Cladonia_mitis_5524
            Cladonia_mitis_9915
            Cladonia_mitis_s.n.
            Cladonia_rangiferina
            Cladonia_subtenuis
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M109]

	TITLE 'Fig.2c, GAPDH';
	LINK TAXA = TaxonLabelSet11006;
	DIMENSIONS NCHAR=1026;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                    10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990       1000       1010       1020      ]
[                                     .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .      ]
Cladonia_arbuscula_202       GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATGACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATTCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_212       GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_215       GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGATCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5122      ??????????????GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5124      ?ATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5300      GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5323      ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TACTGTCATGGACCCGTCGGCCTCCGAAAAAGTGGCTGACGTTACCGCCCTGCGGACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGCCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAGTCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACGATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5372      GATTGCT?TTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCCGCTACTCTACTGTCATGGACCCGTCGGCCTCCGAAAAAGTGGCTGACGTTACCGCCCTGCGGACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAGTCCGATATCGAGGTTATTTCTAATGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACTTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACGATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTC?ACGCCAAGGCCGGTAT
Cladonia_arbuscula_5429      GAT?GCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGA?CACGGTGCCGTGAAGGTCGT?GCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCCGCTACTCTACTGTCATGGACCCGTCGGCCTCCGAAAAAGTGGCTGACGTTACCGCCCTGCGGACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAGTCCGATATCGAGGTTATTTCTAATGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACTTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACGATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5471      GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5536      GAT?GCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_5537      GATTGCTTTTTCC-GAAGCTCAAGCTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_57095     ?????????????????????????????????????????????????????????????????????GGTGCCGTGAAGGT?GTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCA?AACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGG????????????????????????????????????????????????????????????????????????????????????????????????????AAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_57256     ???????????CC-GAAGCTCAAGTTG-TAGGGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTTCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGATCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_arbuscula_9910      GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATATTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATGGACCCGTCGGCCTCCGAAAAAGTGGCTGACGTTACCGCCCTGCGGACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATTGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGTGTTAATGAAGAAACCTATAAGTCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGCCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACGATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_201           GATTGCTTTTTCC-GAAGCTCAAGTTGGTAGAGCTACCGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCCCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAATACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTCATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCACACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_216           GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTTGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTTTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_217           ?ATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTTGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTTTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_218           ?ATTGCTTTTTCCCCAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTTGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAACCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5304          GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTTGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5339          GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5376          GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATCATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5381          GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTCGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5500          GAT?GCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATCATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5501          GATTGCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATCATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_5524          GAT?GCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTTGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAACATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_mitis_9915          ??????????????????????????????????????GCTGACAT?TTT-GACACCAGTG?CGAGCACGG?GCCG?GAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCAATTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGACT??????????????????????????????????????????????
Cladonia_mitis_s.n.          GA??GCTTTTTCC-GAAGCTCAAGCTGGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCCTTCTCAGCTACTCTACTGTCATAGACCCGTCGGCCTCCGAAACAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACCATCGAGGTTGAGGGCTCGGACCTTATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGACACCGGCGCATACTACATCGTCGAATCAACGGGTGTATTTACCACCACAGAGAAGGCCAAGGCGCACTTGAAGGGTGGCGCCAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAATGAAGAAACCTATAAATCCGATATCGAGGTTATTTCTAACGCATCATGCACAACGAATTGTCTTGCTCCTCTCGCCAAGGTCATGCACGATAACTTCACCATCATTGAGGGTCTTATGACCACCATCCACTCTTATACCGCTACTCAGAAGACTGTCGATGGTCCGTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCTACCTCGAATGTCTCCGTCGTTGACCTTACCTGCCGTCTTGAGAAGTCTGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGTGATTTGAAGGGTATGATTCAGTTGCACGTTTCGTGACTATCCGGCTGACAGTTTTCAGGCATCATGGCGTACTCTGAAGATGATCTCGTGTCCACTGATTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_rangiferina         ?ATTGCTTT??CC-GAAGCTCAAGCTAGTAGAGCTACAGCTGACATCTTTTGACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAACGACCCTTTCATCGAGCCCCACTACGCAGTAAGCTCTTTCCCAGCTACTCTACTGTCATGGACACGTCGGGCTCCGAAGTAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTTAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACGATCGAAGTTGAGGGCTCGGACCTCATCGTAAATGGCCAAAAAGTCAAATTCTACACTGAGAAGGACCCCGGTGCCATCCCATGGAAGGATACTGGCGCATACTACATCGTCGAATCAACGGGTGTCTTTACCACCACAGAGAAGGCCAAGGCTCACTTGAAGGGTGGTGCTAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTTGTCATGGGCGTTAACAACGAGACCTATAAGTCCGACCTCGAGGTTATTTCTAACGCATCATGCACAACGAACTGCCTTGCTCCTCTTGCCAAGGTCATGCACGATGAATTCACCATCATTGAGGGTCTTATGACCACCATTCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCATCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGCACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAACGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCCGTGGTTGACCTTACCTGCCGTCTCGAGAAGTCCGTCACCTACGACGAGATCAAGGAGGCAATGAAGAAGGCCTCCGACGGCGAATTGAAGGGTATGATTCATTTTCGCGTTTCGTGACTCTCTGGCTGACGGTTTCCAGGCATCATGGCTTACTCGGAAGATGATCTCGTGTCTACGGACTTAAATGGAGACAATCACTCCTGCATTTTCGACGCCAAGGCCGGTAT
Cladonia_subtenuis           GAT?GCTATTTCCCGAAGCTCAAGCCAGTAGAGCTACAGCTGACATCTTT-GACACCAGTGTCGAGCACGGTGCCGTGAAGGTCGTCGCAGTCAATGACCCTTTCATCGAACCCCACTACGCAGTAAGATCCTTCCCAGCTTCTCTACTGTCATGGACCCGTCGGGCTCCGAAATAGTGGCTGACGTTACCGCCCTGCGAACTAGGCATACATGCTCAAGTACGACTCTCAGCATGGTCAATTCAAAGGTACAATCGAAGTTGAGGGCTCGGACCTCATCGTAAATGGCCAAAAAGTCAAATTTTACACTGAGAAGGACCCCGGTGCCATTCCATGGAAGGATACCGGCGCATACTACATCGTCGAATCAACGGGTGTCTTTACCACCACAGAGAAGGCCAAGGCTCACTTGAAAGGTGGTGCTAAGAAGGTCGTCATCTCAGCGCCGTCAGCAGACGCTCCCATGTTCGTCATGGGCGTTAACAACGAGACCTATAAGTCCGACCTTGAGGTTATTTCTAACGCATCATGCACAACGAACTGCCTTGCTCCTCTTGCCAAGGTCATGCACGATGAATTCACCATCATTGAGGGTCTTATGACCACCATTCACTCTTATACCGCTACTCAGAAGACTGTCGATGGCCCTTCCGCCAAGGACTGGAGAGGCGGCCGCACTGCTGCTCAGAACATTATCCCCAGCAGTACTGGTGCCGCAAAGGCCGTCGGCAAAGTTATCCCAAGCTTGAATGGCAAGCTCACTGGCATGTCTATGCGTGTACCCACCTCGAATGTCTCTGTGGTTGACCTTACCTGCCGTCTCGAAAAGTCCGTCACCTACGATGAGATCAAGGAGGCAATGAAGAAGGCCTCCAATGGCGAATTGAAGGGTATGGTTCATTTTCGCGTTTCGTGTCTCTCTGGCTGACGGTTTCCAGGCATCATGGCTTACTCGGAAGATGATCTCGTGTCTACTGACTTAAATGGAGACAATCACTCCTGCATTTTCGATGCCAAGGCCGGTAT
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