#NEXUS [written Fri Dec 22 11:53:43 GMT 2017 by Mesquite version 3.31 (build 859) at Figueirinha/10.17.130.152] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=111; TAXLABELS 'Dactylonectria valentina Cy-FO-133' 'Dactylonectria hispanica Cy-FO-45' Dactylonectria_hispanica_Cy228 Dactylonectria_vitis_CBS_129082 Dactylonectria_anthuriicola_CBS_564.95 Dactylonectria_pauciseptata_CBS_100819 Dactylonectria_pauciseptata_CBS_120171 'Dactylonectria pauciseptata Cy-FO-37 Cy-FO-38 Cy-FO-178' Dactylonectria_hordeicola_CBS_162.89 Dactylonectria_alcacerensis_Cy134 Dactylonectria_alcacerensis_CBS_129087 Dactylonectria_macrodidyma_CBS_112601 'Dactylonectria macrodidyma Cy-FO-23 Cy-FO-24 Cy-FO-26 Cy-FO-29 Cy-FO-30 Cy-FO-31 Cy-FO-48 Cy-FO-51' 'Dactylonectria macrodidyma Cy-FO-55 Cy-FO-61 Cy-FO-134 Cy-FO-147 Cy-FO-160 Cy-FO-195 Cy-FO-223' 'Dactylonectria macrodidyma Cy-FO-1 Cy-FO-9 Cy-FO-10 Cy-FO-13 Cy-FO-18 Cy-FO-19 Cy-FO-20' Dactylonectria_macrodidyma_CBS_112615 'Dactylonectria macrodidyma Cy-FO-32 Cy-FO-34 Cy-FO-154' Dactylonectria_novozelandica_CBS_112608 Dactylonectria_novozelandica_CBS_113552 'Dactylonectria novozelandica Cy-FO-153 Cy-FO-180 Cy-FO-188 Cy-FO-191 Cy-FO-210 Cy-FO-211' 'Dactylonectria novozelandica Cy-FO-22 Cy-FO-27 Cy-FO-36 Cy-FO-40 Cy-FO-41 Cy-FO-44' 'Dactylonectria novozelandica Cy-FO-46 Cy-FO-47 Cy-FO-56 Cy-FO-60 Cy-FO-137 Cy-FO-146' 'Dactylonectria novozelandica Cy-FO-5 Cy-FO-6 Cy-FO-11 Cy-FO-14 Cy-FO-15 Cy-FO-16 Cy-FO-21' 'Dactylonectria novozelandica Cy-FO-33 Cy-FO-222' 'Dactylonectria novozelandica Cy-FO-35 Cy-FO-59 Cy-FO-66' Dactylonectria_torresensis_CBS_119.41 'Dactylonectria torresensis Cy-FO-218' Dactylonectria_torresensis_CBS_129086 'Dactylonectria torresensis Cy-FO-28' 'Dactylonectria torresensis Cy-FO-12 Cy-FO-227' 'Dactylonectria torresensis Cy-FO-205' 'Dactylonectria torresensis Cy-FO-2 Cy-FO-54' 'Dactylonectria torresensis Cy-FO-43 Cy-FO-65 Cy-FO-127 Cy-FO-206' 'Dactylonectria torresensis Cy-FO-64' Dactylonectria_pinicola_CBS_159.34 Dactylonectria_pinicola_CBS_173.37 'Dactylonectria pinicola Cy-FO-177' Dactylonectria_estremocensis_CBS_129085 Dactylonectria_estremocensis_CPC_13539 Ilyonectria_capensis_CBS_132815 'Ilyonectria capensis Cy-FO-63 Cy-FO-129 Cy-FO-184' Ilyonectria_capensis_CBS_132816 Ilyonectria_venezuelensis_CBS_102032 Ilyonectria_europaea_CBS_129078 Ilyonectria_europaea_CBS_102892 Ilyonectria_robusta_CBS_129084 'Ilyonectria robusta Cy-FO-217 Cy-FO-219' Ilyonectria_robusta_CBS_308.35 Ilyonectria_vredehoekensis_CBS_132807 Ilyonectria_vredehoekensis_CBS_132814 Ilyonectria_cyclaminicola_CBS_302.93 'Ilyonectria cyclaminicola Cy-FO-67' Ilyonectria_crassa_CBS_158.31 Ilyonectria_crassa_CBS_129083 Ilyonectria_rufa_CBS_153.37 'Ilyonectria rufa Cy-FO-53' Ilyonectria_rufa_CBS_640.77 'Ilyonectria rufa Cy-FO-161' 'Ilyonectria rufa Cy-FO-17' 'Ilyonectria rufa Cy-FO-4 Cy-FO-128 Cy-FO-130' 'Ilyonectria rufa Cy-FO-8 Cy-FO-179' 'Ilyonectria rufa Cy-FO-7' Ilyonectria_pseudodestructans_CBS_129081 Ilyonectria_pseudodestructans_CBS_117824 'Ilyonectria pseudodestructans Cy-FO-71' Ilyonectria_gamsii_CBS_940.97 Ilyonectria_liliigena_CBS_189.49 Ilyonectria_liliigena_CBS_732.74 Ilyonectria_leucospermi_CBS_132809 Ilyonectria_leucospermi_CBS_132810 'Ilyonectria ilicicola Cy-FO-224 Cy-FO-225 Cy-FO-226' Ilyonectria_protearum_CBS_132811 Ilyonectria_protearum_CBS_132812 Ilyonectria_panacis_CBS_129079 'Ilyonectria mors-panacis CBS 124662' 'Ilyonectria mors-panacis CBS 306.35' Ilyonectria_liriodendri_CBS_110.81 Ilyonectria_liriodendri_CBS_117527 'Ilyonectria liriodendri Cy-FO-132 Cy-FO-142' 'Ilyonectria liriodendri Cy-FO-50 Cy-FO-52 Cy-FO-57 Cy-FO-68 Cy-FO-136' 'Ilyonectria liriodendri Cy-FO-183' 'Ilyonectria liriodendri Cy-FO-221' Ilyonectria_lusitanica_CBS_129080 Ilyonectria_palmarum_CBS_135754 Ilyonectria_palmarum_CBS_135753 Ilyonectria_destructans_CBS_264.65 Ilyonectria_coprosmae_CBS_119606 Cylindrodendrum_alicantinum_CBS_139518 'Cylindrodendrum alicantinum Cyl-11' 'Cylindrodendrum alicantinum Cy-FO-25' Cylindrodendrum_album_CBS_110655 Cylindrodendrum_album_CBS_301.83 'Neonectria quercicola Cy-FO-3' Neonectria_quercicola_CR21 Neonectria_quercicola_CPC13530 Neonectria_quercicola_CPC_13531 Neonectria_sp.1_CPC_13545 Neonectria_candida_CBS_182.36 Neonectria_candida_CBS_151.29 Cylindrodendrum_hubeiense_CBS_124071 Cylindrodendrum_hubeiense_CBS_129.97 Neonectria_obtusispora_CPC_13544 Neonectria_obtusispora_CBS_183.36 Neonectria_neomacrospora_CBS_503.67 Neonectria_neomacrospora_CBS_324.61 Neonectria_neomacrospora_CBS_118984 Neonectria_ditissima_CBS_226.31 Neonectria_ditissima_CBS_835.97 Neonectria_major_CBS_240.29 Campylocarpon_fasciculare_CBS_112613 Campylocarpon_pseudofasciculare_CBS_112679 ; END; BEGIN CHARACTERS; TITLE 'Fig2_his3_MAFFT'; DIMENSIONS NCHAR=428; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Dactylonectria valentina Cy-FO-133' gtgagtc---------------------------tactcgt-cgcgtcatttaattgacgcgtcgcgccctcat-ca---------tcgtaccactgtactgactt--caag------------ctacaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgactgagctcctcatccgcaagctccccttccagcgtcttgtgagtactc--atcg-cctcac----------gcacacgtcaaggc-acacgctctaacacaatcgtgacaggtccgtgagattgcccaggacttcaagagcgacctccgcttccagtcctccgccatcggtgctctccaggagtcggtcgagt- 'Dactylonectria hispanica Cy-FO-45' gtgagtc---------------------------tactcgt-cgcgtcatttaattgacgcgtcgcgccctcat-ca---------tcgtaccattgtactgacct--caag------------ctacaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgactgagctcctcatccgcaagctccccttccagcgtcttgtgagtactc--atcg-ccccac----------gcacacgtcaaggc-acacgctctaacacaatcgtgacaggtccgtgagattgcccaggacttcaagagcgacctccgcttccagtcctctgccatcggtgctctccaggagtcggtcgagt- Dactylonectria_hispanica_Cy228 gtgagtc---------------------------tactcgt-cgcgtcatttaattgacgcgtcgcgccctcat-ca---------tcgta-cattgtactgacct--caag------------ctacaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgactgagctcctcatccgcaagctccccttccagcgtcttgtgagtactc--atcg-ccccac----------gcacacgtcaaggc-acacgctctaacacaatcgtgacaggtccgtgagattgcccaggacttcaagagcgacctccgcttccagtcctctgccatcggtgctctccaggagtcggtcgagt- Dactylonectria_vitis_CBS_129082 gtgagtc---------------------------tactcgt-cacgtcatttaattgacgcatcgcgc-------------------catatcattatactgacct--caaa------------ccccaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgactgagctcctcatccgcaagctccccttccagcgtcttgtgagtactt--atgc-tcccgc----------cccgccccgcccgc-acacgttctaacacaaccgtgacaggtccgcgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggtgctctccaggagtcggtcgagt- Dactylonectria_anthuriicola_CBS_564.95 ---------------------------------------gc-cacgtcatttaattgacgcgtcgcgcccccat-cgcga-cac----------acgtactgactt--caaaccccccccccccccccca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgactgagctcctcatccgcaagctccccttccagcgtctcgtgagtatcc--atcg-ccacac----------gcacacatcaaggc-acatgccctaacacaaccgtgacaggtccgtgagattgcccaggacttcaagagcgacctccgcttccagtcctccgccatcggcgccctccaggagtcggtcgagt- Dactylonectria_pauciseptata_CBS_100819 gtgagtc------------------------------tcgc-cgcgtcatttaattgacgcgtcgctcccccct-----------accgcatcatcgtactgacct--cgaa------------ccccaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgctaccagaagtcgaccgagctcctcattcgcaagctccccttccagcgtctcgtgagtacct--acca-ccac------------acatacacaaaggc-acacacgctaacacgatcgtgacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggcgctctccaggagtccgttgagt- Dactylonectria_pauciseptata_CBS_120171 gtgagtc------------------------------tcgc-cgcgtcatttaattgacgcgtcgctcccccct-----------accgcatcatcgtactgacct--cgaa------------ccccaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgctaccagaagtcgaccgagctcctcattcgcaagctccccttccagcgtctcgtgagtacct--acca-ccac------------acatacacaaaggc-acacacgctaacacgatcgtgacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggcgctctccaggagtccgttgagt- 'Dactylonectria pauciseptata Cy-FO-37 Cy-FO-38 Cy-FO-178' gtgagtc------------------------------tcgc-cgcgtcatttaattgacgcgtcgctcccccct-----------accgcatcatcgtactgacct--cgaa------------ccccaa-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgctaccagaagtcgaccgagctcctcattcgcaagctccccttccagcgtctcgtgagtacct--acca-ccac------------acatacacaaaggc-acacacgctaacacgatcgtgacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggcgctctccaggagtccgttgagt- Dactylonectria_hordeicola_CBS_162.89 gtgagtc---------------------tcctctccgccgg-cgcgtcatttacttgacgcgtcgcgcctccgt-ca---------acgcatcgccatactgactt--caa-------------acctca-acagcccgcaagagcgccccctctaccggcggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctgctcatccgcaagctccccttccagcgtctcgtgagtatac--acct-acgcatc---g-----gcacgcccccaagc-gcacagtctaacacacccgacacaggtccgtgagatcgcccaggacttcaagagcgacctccgcttccagtcgtccgccatcggtgctcttcaggagtccgtcgagt- Dactylonectria_alcacerensis_Cy134 gtgagtc------------------------ccatcgccgg-cgcgccatttacctgacgcgtcgcgtttccat-caaca------atgcatcaccatactgacct--caa-------------ccatca-acagcccgcaagagcgccccctctactggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacat------------ttctaacctcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgaccttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_alcacerensis_CBS_129087 gtgagtc------------------------ccatcgccgg-cgcgccatttacctgacgcgtcgcgtttccat-caaca------atgcatcaccatactgacct--cag-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacat------------ttctaacctcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgaccttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_macrodidyma_CBS_112601 gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacacc-----------tttaacctttaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- 'Dactylonectria macrodidyma Cy-FO-23 Cy-FO-24 Cy-FO-26 Cy-FO-29 Cy-FO-30 Cy-FO-31 Cy-FO-48 Cy-FO-51' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacacc-----------tttaaccttcaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- 'Dactylonectria macrodidyma Cy-FO-55 Cy-FO-61 Cy-FO-134 Cy-FO-147 Cy-FO-160 Cy-FO-195 Cy-FO-223' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacacc-----------tttaaccttcaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- 'Dactylonectria macrodidyma Cy-FO-1 Cy-FO-9 Cy-FO-10 Cy-FO-13 Cy-FO-18 Cy-FO-19 Cy-FO-20' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacacc-----------tttaaccttcaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- Dactylonectria_macrodidyma_CBS_112615 gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacacgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--atacaacacc-----------tttaacatttaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- 'Dactylonectria macrodidyma Cy-FO-32 Cy-FO-34 Cy-FO-154' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacacgtcgcgtttccat-caaaa------atgcatcgccatactaacct--taa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--atacaacacc-----------tttaacatttaacc-acacattatctaacagtagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgccctccaggagtccgtcgagt- Dactylonectria_novozelandica_CBS_112608 gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_novozelandica_CBS_113552 gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-153 Cy-FO-180 Cy-FO-188 Cy-FO-191 Cy-FO-210 Cy-FO-211' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-22 Cy-FO-27 Cy-FO-36 Cy-FO-40 Cy-FO-41 Cy-FO-44' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-46 Cy-FO-47 Cy-FO-56 Cy-FO-60 Cy-FO-137 Cy-FO-146' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-5 Cy-FO-6 Cy-FO-11 Cy-FO-14 Cy-FO-15 Cy-FO-16 Cy-FO-21' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-33 Cy-FO-222' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctcttcgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-acacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria novozelandica Cy-FO-35 Cy-FO-59 Cy-FO-66' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatcaccacactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagttcaa--acacaacaccc----------tttaactttcaacc-gcacatcatctaacaccagacacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_torresensis_CBS_119.41 gtgagtc------------------------ccaccgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-218' gtgagtc------------------------ccaccgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_torresensis_CBS_129086 gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-28' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-12 Cy-FO-227' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctactggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacactagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-205' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------atgcatctccatactaacct--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagccccaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-2 Cy-FO-54' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcatcgcgtttccat-caaca------aggcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-43 Cy-FO-65 Cy-FO-127 Cy-FO-206' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------aggcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- 'Dactylonectria torresensis Cy-FO-64' gtgagtc------------------------ccatcgccgg-cgcgccatttacttgacgcgtcgcgtttccat-caaca------aggcatctccatactaactt--caa-------------ccatca-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctcgtgagtccaa--acacaacacct----------ttttactttcaacc-acacattatctaacattagacacaggtccgtgagatcgctcaggacttcaagagcgatcttcgcttccagtcctctgccattggtgctctccaggagtccgtcgagt- Dactylonectria_pinicola_CBS_159.34 gtgagtc------------------------tcatcgccgt-cgcgtcatttactcaccgcgtcgcgcctccat-caaca------atgcatcgccatactaaccc--caa-------------ccctcc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgactgagcttctcatccgaaagctccccttccagcgtctcgtgagtccga--acct-gcacacc---a-----ccatcgctctcaacaacacacta------acacgatacaggtccgtgagattgcccaggacttcaagagcgatcttcgcttccagtcctctgccatcggcgctctccaggagtccgtcgagt- Dactylonectria_pinicola_CBS_173.37 gtgagtc------------------------tcatcgccgt-cgcgtcatttactcaccgcgtcgcgcctccat-caaca------atgcatcgccatactaaccc--caa-------------ccctcc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgactgagcttctcatccgaaagctccccttccagcgtctcgtgagtccga--acct-gcacacc---a-----ccatcgctctcaacaacacacta------acacgatacaggtccgtgagattgcccaggacttcaagagcgatcttcgcttccagtcctctgccatcggcgctctccaggagtccgtcgagt- 'Dactylonectria pinicola Cy-FO-177' gtgagtc------------------------tcatcgccgt-cgcgtcatttactcaccgcgtcgcgcctccat-caaca------atgcatcgccatactaaccc--caa-------------ccctcc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgactgagcttctcatccgaaagctccccttccagcgtctcgtgagtccga--acct-gcacacc---a-----ccatcgctctcaacaacacacta------acacgatacaggtccgtgagattgcccaggacttcaagagcgatcttcgcttccagtcctctgccatcggcgctctccaggagtccgtcgagt- Dactylonectria_estremocensis_CBS_129085 gtgagtc---------------------taatcatcgctat-cgcgtcatttacctgacgcgtagcgcccccat-caaca------atgcatcaccatactgactc--caa-------------cactca-acagcccgcaagagcgccccctctactggtggcgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagcttctcatccgaaagctccccttccagcgtctggtgagtttga--acac-gcacatt---a-----cccatacctccaac-gcacact----aacaacagacataggtccgtgagattgcacaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctctccaggagtccgttgagt- Dactylonectria_estremocensis_CPC_13539 gtgagtc---------------------taatcatcgctat-cgcgtcatttacctgacgcgtagcgcccccat-caaca------atgcatcaccatactgactc--caa-------------cactca-acagcccgcaagagcgccccctctactggtggcgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgaccgagcttctcatccgaaagctccccttccagcgtctggtgagtttga--acac-gcacatt---a-----cccatacctccaac-gcacact----aacaacagacataggtccgtgagattgcacaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctctccaggagtccgttgagt- Ilyonectria_capensis_CBS_132815 gtgagttct------ctcatgcgccgacctgacctgaccgt-cctgccttcggctcgacgcgtctcgcaacatcgcgcac------tcccaacatcatcttcgcatactaa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcacct--cctat--ctac?----?ac--gcatcacatcaagc-atcatctctaacatgcacaacacaggtccgcgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria capensis Cy-FO-63 Cy-FO-129 Cy-FO-184' gtgagttct------ctcatgcgccgacctgacctgaccgt-cctgccttcggctcgacgcgtctcgcaacatcgcgcac------tcccaacatcatcttcgcatactaa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcacat--cctat--ctaca----cac--gcatcacatcaagc-atcatctctaacatgcacaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_capensis_CBS_132816 gtgagttct------ctcatgcgccgacctgacctgaccgt-cctgccttcggctcgacgcgtctcgcaacatcgcgcac------tcccaacatcatcttcgcata??aa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagtctggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcacct--cctat--ctaca----cac--gcatcacatcaagc-atcatctctaacatgcacaacacaggtccgcgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_venezuelensis_CBS_102032 gtgagttct------ctcatgcgccgacctgacctgaccgc-cccgccatcggctcgacgcgtctcgcaacatcgcgcac------tcccaacatcatcatcgcatactaa-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatcc--ctcacc----cg----cac--gcctagcatcacgc-atcatctctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- Ilyonectria_europaea_CBS_129078 gtgagttct------ctccgacg-cgacctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcgcat------acccgatatcatcctcacatactaa-------------cattac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcttggtaagcaccc--ctcatt----ta----cac--gtctcgcatcaagc-accacctctaacacactcgacacaggtccgcgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_europaea_CBS_102892 gtgagttct------ctccgacg-cgacctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcgcat------acccgatatcatcctcacatactaa-------------cattac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcttggtaagcaccc--ctcatt----ta----cac--gtctcgcatcaagc-accacctctaacacactcgacacaggtccgcgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_robusta_CBS_129084 gtgagttct------ctccgccgccgacctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcgcat------acccgacatcatcctcacatactaa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatct--ctcatt----------cac--gtctcgcatcaaac-atcatccctaacacgctcaacacaggtccgcgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria robusta Cy-FO-217 Cy-FO-219' ------------------------------gacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcgcat------acccgacatcatcctcacatactaa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcacct--ctcatt----------cac--gtctcgcatcaaac-atcatccctaacacgctcaacacaggtccgcgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_robusta_CBS_308.35 gtgagttct------ctccgccgccgacctgacttgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcgcat------acccgacatcattctcacatactaa-------------caccac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatct--ctcatt----------cac--gtctcgcatcaaac-atcatccctaacacgctcaacacaggtccgcgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_vredehoekensis_CBS_132807 gtgagtttt------ctccggcgccgacctggcctgaccgt-cccgtcttcgactcgacgcgtctcgcatcatcgcgcac------acccggcatcatcctcacatactaa-------------catcac-acagcccgcaagagcgccccctccaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatct--cccact----------cac--gcctcgcatcaagc-atcggctctaacgcgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_vredehoekensis_CBS_132814 gtgagtttt------ctccggcgccgacctggcctgaccgt-cccgtcttcgactcgacgcgtctcgcatcatcgcgcac------acccggcatcatcctcacatactaa-------------catcac-acagcccgcaagagcgccccctccaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatct--cccact----------cac--gcctcgcatcaagc-atcggctctaacgcgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_cyclaminicola_CBS_302.93 gtgagttct------ctcctgtgctgacctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacaccgcacat------acccgaaatcttcctcacatactga-------------caccac-acagcccgcaagagcgccccctctaccggcggtgtcaagaagcctcaccgctacaagcccggtactgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--gtcatacccaca----cac--gtgtcgcactaagc-accatctctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria cyclaminicola Cy-FO-67' gtgagttct------ctcctgtgctgacctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgaaatcttcctcacatactga-------------caccac-acagcccgcaagagcgccccctctaccggcggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--gtcatacccaca----cac--gtgtcgcactaagc-accatctctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgttgagt- Ilyonectria_crassa_CBS_158.31 gtgagttct------ctcctgtg-----ccgacctggccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------cattaccacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--cccatacccaca----cac--atgttgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_crassa_CBS_129083 gtgagttct------ctcctgtg-----ccgacctggccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------cattaccacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--cccatacccaca----cac--atgttgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_rufa_CBS_153.37 gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcacaacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- 'Ilyonectria rufa Cy-FO-53' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcacaacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- Ilyonectria_rufa_CBS_640.77 gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcacaacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria rufa Cy-FO-161' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcacaacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria rufa Cy-FO-17' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcaccacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria rufa Cy-FO-4 Cy-FO-128 Cy-FO-130' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgccctcacatactga-------------catcaccacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria rufa Cy-FO-8 Cy-FO-179' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcaccacagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcgtcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctctgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria rufa Cy-FO-7' gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcacatactga-------------catcaccatagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--ctcatacccaca----cac--gcatcgcatcaagc-acccactctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_pseudodestructans_CBS_129081 gtgagttct------ctcctgtg-----ctgacctgaccgt-cccgtctttggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcgcatactga-------------catcaccacagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--cccatacccaca----cac--gtgttgcatcaagc-acccactctaacacgctcaatacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_pseudodestructans_CBS_117824 gtgagttct------ctcctgtg-----ctgacctgaccgt-cccgtctttggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcgcatactga-------------catcaccacagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--cccatacccaca----cac--gtgttgcatcaagc-acccactctaacacgctcaatacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria pseudodestructans Cy-FO-71' gtgagttct------ctcctgtg-----ctgacctgaccgtccccgtccttggctcgacgcgtctcgcaacatggcacat------acccgacatcgtcctcgcatactga-------------catcaccacagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--cccatacccaca----cac--gtgttgcatcaagc-acccattctaacacgctcaatacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_gamsii_CBS_940.97 gtgagttct------cccctgtg-----ctgacctgaccgt-cccgcctccggctcgacgtgcctggcgacatcgcacat------acccgacatcttcaccacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatcg--cccatacccaca----cac--gtgtcgcatcaagc-acccactctaacacgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggtgcccttcaggagtccgtcgagt- Ilyonectria_liliigena_CBS_189.49 gtgagttct------ctcctgtg-----ctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacatcttcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatta--ctcatacccaca----cgc--gtgtctcatcaagc-acccactctaacacgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_liliigena_CBS_732.74 gtgagttct------ctcct-tg-----ctgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacatcttcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcatta--ctcatacccaca----cgc--gtgtctcatcaagc-acccactctaacacgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_leucospermi_CBS_132809 gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacatcctcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctccttatccgcaagctccccttccagcgtctggtaagcatca--ctcacatccaca----cac--atgtggcactaagc-atcatct?taacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_leucospermi_CBS_132810 gtgagttct------ctcctgtg-----ccgacctgaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacatcctcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctccttatccgcaagctccccttccagcgtctggtaagcatca--ctcacatccaca----cac--atgtggcactaagc-atcatctctaacacgctcaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria ilicicola Cy-FO-224 Cy-FO-225 Cy-FO-226' gtgagttct------ctcctgtgtcgacctgacctgaccgc-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgaca---gcatcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcattcgcaagctccccttccagcgtctggtaagcatca--gtcatatccaca----cac--gtgtcgcactaagc-atcatctctaacacgcccaacacaggtccgtgagatcgcccaagacttcaagagcgaccttcgcttccagtcctcggccatcggcgccctccaggagtccgtcgagt- Ilyonectria_protearum_CBS_132811 gtgagttct------ctcctgtgtcgacctgaccagaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacagcatcctcacatactga-------------catcac-acagcccgtaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--ctcat--caaca----cac--gtgtcgcactaagc-atcatctctaacacgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctcggccatcggcgccctccaggagtccgtcgagt- Ilyonectria_protearum_CBS_132812 gtgagttct------ctcctgtgtcgacctgaccagaccgt-cccgccttcggctcgacgcgtctcgcaacatcgcacat------acccgacagcatcctcacata??ga-------------catcac-acagcccgtaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--ctcat--caaca----cac--gtgtcgcactaagc-atcatctctaacacgcccaacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctcggccatcggcgccctccaggagtccgtcgagt- Ilyonectria_panacis_CBS_129079 gtgagttct------ctcctgtg-----tcgacccgaccgt-cccgtcttcggctcgacgcgtctcgcaacatggcacat------acccgaca---tcgtcacatactga-------------catcaccacagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcacca--cacatacccata----cac--gtgccgcattaaac-accctctctaacacgctcaatacaggttcgtgagatcgcccaggacttcaagagcgacctccgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria mors-panacis CBS 124662' gtgagtttt------cccct-tg-----ccgacctgaccgt-ctcgtcttctgctcgacgcgtcttgcagcatcgcacat------acccaacgtcttcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccatgcccacaccc-aac--gtgccacatcaagc-atccactctaacgcacccgacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- 'Ilyonectria mors-panacis CBS 306.35' gtgagtttt------cccctgtg-----ccgacctgaccgt-ctcgtcttctgctcgacgcgtcttgcagcatcgcacat------acccaacgtcttcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccatgcccacaccc-aac--gtgccacatcaagc-atccactctaacgcacccgacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_liriodendri_CBS_110.81 gtgagtttt------ctcctgcg-----ccgacctgaccgt-cctgtcctctgcccgacgcgtcttgcaacatc------------------tatcttcatcacatactga-------------cattac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccacatctacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- Ilyonectria_liriodendri_CBS_117527 gtgagtttt------ctcctgcg-----ccgacctgaccgt-cctgtcttctgcccgacgcgtcttgcaacatc------------------tatcttcatcacatactga-------------cattac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccacatctacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- 'Ilyonectria liriodendri Cy-FO-132 Cy-FO-142' gtgagtttt------ctcctgcg-----ccgacctgaccgt-cctgtcttctgcccgacgcgtcttgcaacatc------------------tatcttcatcacatactga-------------cattac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccacatctacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- 'Ilyonectria liriodendri Cy-FO-50 Cy-FO-52 Cy-FO-57 Cy-FO-68 Cy-FO-136' gtgagtttt------ctcctgcg-----ccgacctgaccgt-cctgtcttctgcccgacgcgtcttgcaacatc------------------tatcttcatcacatactga-------------cattac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagcttcccttccagcgtctggtaagcatca--tccacatctacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- 'Ilyonectria liriodendri Cy-FO-183' gtgagtttt------ctcctgcg-----ccgacctgaccgt-cctgtctcctgcccgacgcgtcttgcaacatcgcacat------atccaacatcttcatcacatactga-------------cactac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgaaattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccacatccacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- 'Ilyonectria liriodendri Cy-FO-221' gtgagtttt------ctcctgcg-----tcgacctgaccgt-cctgtcttctgcccgacgcgtcttgcaacatcgcacat------gtccaacatcttcatcacatactga-------------cattac-acagcccgcaagagcgccccatctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccacatctacaccc-aac--gtgtcacatcaagc-attcactctaacacacccggcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- Ilyonectria_lusitanica_CBS_129080 gtgagttct------ctcctgtg-----ccggctcgaccgt-cctgtcttctgctcgacgcgtcccgcaacatcgcacat------atccagcatattcctcacatactga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgtctggtaagcatct--tctacacccacaccc-aac--gtgccacatcgaac-attcaccctaacgcatccgtcacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtctgtcgagt- Ilyonectria_palmarum_CBS_135754 gtgagttct------ctcctgtg-----cagacctgaccgt-cctgtcttctgctcgacgcgtctcgcaacatcgcacac------atccaacatcctcctcacatactga-------------tatcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcatca--cccacatccacacccaaac--atgtcacatcaagc-atccaccctaacgcgcccgatacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_palmarum_CBS_135753 gtgagttct------ctcctgtg-----cagacctgaccgt-cctgtcttctgctcgacgcgtctcgcaacatcgcacac------atccaacatcctcctcacatactga-------------tatcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcatca--cccacatccacacccaaac--atgtcacatcaagc-atccaccctaacgcgcccgatacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_destructans_CBS_264.65 gtgagttct------ctcttgtg-----ccgacctgaccgt-cctgtctcctgctcgacgcgtcttgcaacatcgcac--------acccaacgtcctcttcacatactga-------------catcac-acagcccgcaagagcgccccctccaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatca--tccgcacccacacccaaac--acgtcacatcaagc-attcgttctaacacaaccgacacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggcgccctccaggagtccgtcgagt- Ilyonectria_coprosmae_CBS_119606 gtaagttctct----ctcctgtg-----acggcctgaccgt-cccg---cctgctcgacgcgtttcgcaacatcgcacat------------tgtcttcctcatac--tga-------------catcac-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagattcgacgatatcagaagtcgactgagctcctcatccgcaagctccccttccagcgtctggtaagcatca--tcca------------tac--atactgtaatggta-atttaccctaacacgctccacacaggttcgcgagatcgcccaggacttcaagagcgacctccgcttccagtcttctgccatcggcgccctccaggagtccgtcgagt- Cylindrodendrum_alicantinum_CBS_139518 gtgagtttcc----cacattgtg----------ccaaccat-cgcggcttcgacccgacgcgtcgcgcactcat-cacgt------ttccatcatcatactgactt--cga-------------cccatc-acagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcatac--ccga--ccccac----acc--gcgtcgcgtctacc-agccactctaacaca--cataacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctcttcaggagtccgtcgagt- 'Cylindrodendrum alicantinum Cyl-11' gtgagtttcc----cacattgtg----------ccaaccat-cgcggcttcgacccgacgcgtcgcgcactcat-cacgt------ttccatcatcatactgactt--cga-------------cccatc-acagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcatac--ccga--ccccac----acc--gcgtcgcgtctacc-agccactctaacaca--cataacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctcttcaggagtccgtcgagt- 'Cylindrodendrum alicantinum Cy-FO-25' gtgagtttcc----cacattgtg----------ccaaccat-cgcggcttcgacccgacgcgtcgcgcactcat-cacgt------ttccatcatcatactgactt--cga-------------cccatc-acagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagatccgtcgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcatac--ccga--ccccac----acc--gcgtcgcgtctacc-agccactctaacaca--cataacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctcttcaggagtccgtcgagt- Cylindrodendrum_album_CBS_110655 gtgagttca-----tccatcctg----------ccgaccgc-cgcggcatctatccgacgcgtcgcacactcca-tcatt------cgccatcatcatactgactt--caa-------------cccatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatta--actacaccccgc----aac--gcgtcgcgctcaac-acccactctaacacattcataacaggtccgtgagatcgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgcccttcaggagtccgtcgagt- Cylindrodendrum_album_CBS_301.83 gtgagttca-----tcc-tc--g----------ccgacaat-cgcgcacttggcccgacgcgtcgcgcacttcg-cccct------tcatcacatcacactgactt------------------tccaac-acagcccgtaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctggtaagcatta--actacaccccgc----aac--gc?acgcgcccaac-atccactctgacacattcataataggtccgtgagattgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgccctccaggagtccgtcgagt- 'Neonectria quercicola Cy-FO-3' gtaag----------tcctcctg----------tccactat-cgcgcaccttccccgacgcgtcgtgcacattg-catcttcatccgtggaacatcacgctgactc----a-------------accatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggcaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagcatac---------ccatc---agat--atatcgcaccaagc-atccactctaacatt--catcccaggttcgcgagattgcccaggacttcaagagcgatctccgcttccagtcttccgccatcggcgctctccaggagtccgtcgagt- Neonectria_quercicola_CR21 gtaag----------tcctcctg----------tccaccat-cgcgcaccttccccgacgcgtcgtgcacattg-catcttcatccgtggaacatcacgctgactc----a-------------accatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagcatac---------ccatc---agat--gtatcgcacgaagc-atccattctaacatt--catcccaggtccgcgagattgcccaggacttcaagagcgatctccgcttccagtcttccgccatcggcgctctccaggagtccgtcgagt- Neonectria_quercicola_CPC13530 gtaag----------tcctcctg----------tccaccat-cgcgcaccttccccgacgcgtcgtgcacattg-catcttcatccgtggaacatcacgctgactc----a-------------accatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagcatac---------ccatc---agat--gtatcgcacgaagc-atccattctaacatt--catcccaggtccgcgagattgcccaggacttcaagagcgatctccgcttccagtcttccgccatcggcgctctccaggagtccgtcgagt- Neonectria_quercicola_CPC_13531 gtaag----------tcctcctg----------tccaccat-cgcgcacctttcccgacgcgtcgtgcacattg-catcttcatccgtggaacatcacgctgactc--tca-------------accatc-acagcccgcaagagtgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagcatac---------ccatc---agat--gtatcgcaccaagc-atccattctaacatt--caccccaggtccgcgagattgcccaggacttcaagagcgatctccgcttccagtcttccgccatcggcgctctccaggagtccgtcgagt- Neonectria_sp.1_CPC_13545 gtaag-----------tcttctg----------ccgaccat-cgcgcacttcgcctgacgcgtcgcgcacttcg-caccttcat--ctggaacatcacactgactt--tca-------------accatc-acagcccgcaagagcgccccctctacaggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgactgagctccttatccgcaagctccctttccagcgcctggtaagcatac---------ccatc---aaac--gca-cgcgtcgaac-atccactctaacata--catcccaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggtgctctccaggagtctgtcgagt- Neonectria_candida_CBS_182.36 gtgagtc--------ctcttctg----------ccgacaat-cgcgcacttggcccgacgcgtcgcgcacttcg-ctcattcat--ctggaacatcacactgactt------------------tccacc-acagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagatccgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagta-ac---------ccatc---aaac--gca-cgcgtcaaac-atccactctaacata--catcacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggtgctctccaggagtccgtcgagt- Neonectria_candida_CBS_151.29 gtgagtc--------ctcttctg----------ccgacaat-cgcgcacttggcccgacgcgtcgcgcacttcg-ctcattcat--ctggaacatcacactgactt------------------tccacc-acagcccgcaagagcgccccttctaccggtggtgtcaagaagcctcaccgctacaagcctggtaccgtcgctctccgtgagatccgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagta-ac---------ccatc---aaac--gca-cgcgtcaaac-atccactctaacata--catcacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctccgccatcggtgctctccaggagtccgtcgagt- Cylindrodendrum_hubeiense_CBS_124071 gtgagtttcctc--ttcatcgtg----------cggaccgc-cgcgacatcgtctcggcgcgtcgtgcacttca-catc-------atccatcatcatgctgactc--gaa-------------accatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcattc--cccacatcc------acac--gcgtcgcgccaagc-atacactctaacacactcgacacaggtccgcgagattgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctctccaggagtccgtcgagt- Cylindrodendrum_hubeiense_CBS_129.97 gtgagtttcctc--ttcatcgtg----------cggaccgc-cgcgacatcgtctcggcgcgtcgtgcacttca-catc-------atccatcatcatgctgactc--gaa-------------accatc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgataccagaagtcgaccgagcttctcatccgcaagctccccttccagcgcctggtaagcattc--cccacatcc------acac--gcgtcgcgccaagc-atgcactctaacacactcgacacaggtccgcgagattgcccaggacttcaagagcgatcttcgcttccagtcctccgccatcggtgctctccaggagtccgtcgagt- Neonectria_obtusispora_CPC_13544 gtgagtc--------------------------tcctcccg-ctgacgctctgtccgacgcgtcgcgcacccca-tgcct-cacccgtaggacaccacactgactt------------------gcaacc-atagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcacat---------ccatc---aaac--gcgtcgcgtcaagc-atccactctaacaca----taacaggttcgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggtgccctccaggagtccgtcgagt- Neonectria_obtusispora_CBS_183.36 gtgagtc--------------------------tcctcctg-ctgacgctctgtccgacgcgtcgcgcacccca-tgcct-cacccgtaggacaccacactgactt------------------gcaacc-atagcccgcaagagcgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaagcacat---------ccatc---aaac--gcgtcgcgtcaagc-atccactctaacaca----taacaggtccgtgagatcgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggtgccctccaggagtccgtcgagt- Neonectria_neomacrospora_CBS_503.67 gtgagtctt------ctaccccg---------tcgacgcat-tgtgctcttcgctcgatgtgtcgtacaccaaa-cgtcc-cacccgccggacatcacactgacct--tga-------------accttc-acagctcgcaagagtgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaggcattc---------ccatc---aaac--gcgtcgcgtccaactacccagtctctaaca--tactacaggttcgtgaaattgcccaagacttcaagagcgatctccgcttccagtcctccgccatcggcgcccttcaggagtctgtcgagt- Neonectria_neomacrospora_CBS_324.61 gtgagtctt------ctaccccg---------tcgacgcat-tgtgctcttcgctcgatgtgtcgtacaccaaa-cgtcc-cacccgccggacatcacactgacct--tga-------------accttc-acagctcgcaagagtgccccctctaccggtggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgcctggtaggcattc---------ccatc---aaac--gcgtcgcgtccaactacccagtctctaaca--tactacaggttcgtgaaattgcccaagacttcaagagcgatctccgcttccagtcctccgccatcggcgcccttcaggagtctgtcgagt- Neonectria_neomacrospora_CBS_118984 gtgagtctt------ctaccccg---------tcgacgcat-tgcgctcttcgctcgacgcgtcgtacaccata-cgccc-catccgccggacatcacactgacct--cga-------------accttc-acagcccgcaagagcgccccctctaccggtggtgtcaagaagccccaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaggcactc---------ccatc---aaac--gcgtcgcgttcaactatctagtctctaaca--cactacaggtccgtgagatcgctcaggacttcaagagcgacctccgcttccagtcctccgccattggcgcccttcaggagtccgtcgagt- Neonectria_ditissima_CBS_226.31 gtgagtttt------cttcctcg----------ctgacc--------gcgccctccgacgcgtcgcgctccctc-------------ccgatcaccatactgacgt--tca-------------accatc-acagcccgcaagagcgccccctcgaccggaggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagctccccttccagcgtctggtaagcactt---------ccatc---aaac--gcgtcgcgtctgac-agccactctaacacacacatcacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctctgccatcggcgctctccaggagtccgtcgagt- Neonectria_ditissima_CBS_835.97 gtgagtttt------cttcctcg----------ccgacc--------gcgcccttcgacgcgtcgcgctccctc-------------ccgatcaccatactgacgt--tca-------------accatc-acagcccgcaagagcgccccctcgaccggaggtgtcaagaagcctcaccgctacaagcccggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgagctcctcatccgcaagcttcccttccagcgtctggtaagcactt---------ccatc---aaac--gcgtcacgtctgac-agccaccctaacacacacatcacaggtccgtgagattgcccaggacttcaagagcgatctccgcttccagtcctctgccatcggcgctctccaggagtccgtcgagt- Neonectria_major_CBS_240.29 gtgagtttt------cttccccg----------ccgacc------gcgtccttttcgacgcgtcgcgcccactc-------------cagatcatcattctgacga--tcg-------------accatc-acagcccgcaagagcgccccctcgaccggaggtgtcaagaagcctcaccgctacaagcccggtactgtcgctctccgtgagattcgacgataccagaagtcgactgagctcctcatccgcaagctccccttccagcgcctggtaagcactt---------tcatc---aaac--gcgtcgcgcctgac-agccactctaacacatgcatcacaggtccgtgagatcgcccaggacttcaagagtgatctccgcttccagtcctccgccatcggcgctctccaggagtccgtcgagt- Campylocarpon_fasciculare_CBS_112613 gtgagtctcatcctccctcgttg----------ccgaccgc-ctcgcacacagccggacgcgtcgcgacttca--cacca------ttgcgcatcaatactgacgt-----------------gctctct-acagcccgcaagagtgctccctccaccggaggtgtcaagaagccccaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgactgagctcctcatccgcaagctcccattccagcgtctcgtaagcatacaacccccacccaga---gaatgcaccgtgtttccaaa-catcacactgacgtgtcaaccacaggtccgcgagattgctcaggatttcaagagcgatctccgcttccagtcatccgccatcggtgctctccaggagtccgtcgagt- Campylocarpon_pseudofasciculare_CBS_112679 gtgagttcc-cattccctcatcg----------ccgatcgc-ctcgcacacagccagacacgtcgcgactccatgcatca------tcacgcatcaacactaacat-----------------gtaatct-atagcccgcaagagtgccccctccaccggaggtgtcaagaagccccaccgctacaagcccggtaccgtcgctctccgtgagattcgtcgctaccagaagtcgactgagcttctcatccgcaagctccccttccagcgtctcgtaagcatac-acccgcgcccagc---aaacccaccacgttttcaag-catcacactgacgtgttaaccataggtccgtgagattgcccaggacttcaagagcgaccttcgcttccagtcctccgccatcggtgctcttcaggagtccgtcgagt- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 428; END; BEGIN NOTES; TAXABITS NAME = newlyAddedTaxon on = 1 - 111; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 428; END; BEGIN LABELS; TAXAGROUPLABEL Dactylonectria__valentina_ COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__hispanica_ COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__vitis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__anthuriicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__pauciseptata COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__hordeicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria_alcacerensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__macrodidyma COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__novozelandica COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__torresensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__pinicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Dactylonectria__estremocensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_capensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_venezuelensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_europaea COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_robusta COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_vredehoekensis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_cyclaminicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_crassa COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_rufa COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_pseudodestructans COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_gamsii COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_liliigena COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_leucospermi COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_ilicicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_protearum COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_panacis COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL 'Ilyonectria mors-panacis' COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_liriodendri COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_lusitanica COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_palmarum COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_destructans COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Ilyonectria_coprosmae COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Cylindrodendrum_alicantinum COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Cylindrodendrum_album COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_quercicola COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_sp.1 COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_sp.2 COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_sp.3 COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_obtusispora COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_candida COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Cylindrodendrum_hubeiense COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_neomacrospora_ COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_ditissima COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Neonectria_major COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Campylocarpon_fasciculare COLOR = (RGB 1 1 1) ; TAXAGROUPLABEL Campylocarpon_pseudofasciculare COLOR = (RGB 1 1 1) ; END; BEGIN SETS; TAXPARTITION * UNTITLED = Dactylonectria__valentina_ : 1, Dactylonectria__hispanica_ : 2 - 3, Dactylonectria__vitis : 4, Dactylonectria__anthuriicola : 5, Dactylonectria__pauciseptata : 6 - 8, Dactylonectria__hordeicola : 9, Dactylonectria_alcacerensis : 10 - 11, Dactylonectria__macrodidyma : 12 - 17, Dactylonectria__novozelandica : 18 - 25, Dactylonectria__torresensis : 26 - 34, Dactylonectria__pinicola : 35 - 37, Dactylonectria__estremocensis : 38 - 39, Ilyonectria_capensis : 40 - 42, Ilyonectria_venezuelensis : 43, Ilyonectria_europaea : 44 - 45, Ilyonectria_robusta : 46 - 48, Ilyonectria_vredehoekensis : 49 - 50, Ilyonectria_cyclaminicola : 51 - 52, Ilyonectria_crassa : 53 - 54, Ilyonectria_rufa : 55 - 62, Ilyonectria_pseudodestructans : 63 - 65, Ilyonectria_gamsii : 66, Ilyonectria_liliigena : 67 - 68, Ilyonectria_leucospermi : 69 - 70, Ilyonectria_ilicicola : 71, Ilyonectria_protearum : 72 - 73, Ilyonectria_panacis : 74, 'Ilyonectria mors-panacis' : 75 - 76, Ilyonectria_liriodendri : 77 - 82, Ilyonectria_lusitanica : 83, Ilyonectria_palmarum : 84 - 85, Ilyonectria_destructans : 86, Ilyonectria_coprosmae : 87, Neonectria_candida : 99, Cylindrodendrum_hubeiense : 100 - 101, Neonectria_obtusispora : 102 - 103, Neonectria_neomacrospora_ : 104 - 106, Neonectria_ditissima : 107 - 108, Neonectria_major : 109, Campylocarpon_fasciculare : 110, Campylocarpon_pseudofasciculare : 111; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 428; END; BEGIN TREES; Title 'Fig2_his3_RaXML_bipartitions'; ID 01604b776f7e5; LINK Taxa = Taxa; TRANSLATE [0] 1 'Dactylonectria valentina Cy-FO-133', [1] 2 'Dactylonectria hispanica Cy-FO-45', [2] 3 Dactylonectria_hispanica_Cy228, [3] 4 Dactylonectria_vitis_CBS_129082, [4] 5 Dactylonectria_anthuriicola_CBS_564.95, [5] 6 Dactylonectria_pauciseptata_CBS_100819, [6] 7 Dactylonectria_pauciseptata_CBS_120171, [7] 8 'Dactylonectria pauciseptata Cy-FO-37 Cy-FO-38 Cy-FO-178', [8] 9 Dactylonectria_hordeicola_CBS_162.89, [9] 10 Dactylonectria_alcacerensis_Cy134, [10] 11 Dactylonectria_alcacerensis_CBS_129087, [11] 12 Dactylonectria_macrodidyma_CBS_112601, [12] 13 'Dactylonectria macrodidyma Cy-FO-23 Cy-FO-24 Cy-FO-26 Cy-FO-29 Cy-FO-30 Cy-FO-31 Cy-FO-48 Cy-FO-51', [13] 14 'Dactylonectria macrodidyma Cy-FO-55 Cy-FO-61 Cy-FO-134 Cy-FO-147 Cy-FO-160 Cy-FO-195 Cy-FO-223', [14] 15 'Dactylonectria macrodidyma Cy-FO-1 Cy-FO-9 Cy-FO-10 Cy-FO-13 Cy-FO-18 Cy-FO-19 Cy-FO-20', [15] 16 Dactylonectria_macrodidyma_CBS_112615, [16] 17 'Dactylonectria macrodidyma Cy-FO-32 Cy-FO-34 Cy-FO-154', [17] 18 Dactylonectria_novozelandica_CBS_112608, [18] 19 Dactylonectria_novozelandica_CBS_113552, [19] 20 'Dactylonectria novozelandica Cy-FO-153 Cy-FO-180 Cy-FO-188 Cy-FO-191 Cy-FO-210 Cy-FO-211', [20] 21 'Dactylonectria novozelandica Cy-FO-22 Cy-FO-27 Cy-FO-36 Cy-FO-40 Cy-FO-41 Cy-FO-44', [21] 22 'Dactylonectria novozelandica Cy-FO-46 Cy-FO-47 Cy-FO-56 Cy-FO-60 Cy-FO-137 Cy-FO-146', [22] 23 'Dactylonectria novozelandica Cy-FO-5 Cy-FO-6 Cy-FO-11 Cy-FO-14 Cy-FO-15 Cy-FO-16 Cy-FO-21', [23] 24 'Dactylonectria novozelandica Cy-FO-33 Cy-FO-222', [24] 25 'Dactylonectria novozelandica Cy-FO-35 Cy-FO-59 Cy-FO-66', [25] 26 Dactylonectria_torresensis_CBS_119.41, [26] 27 'Dactylonectria torresensis Cy-FO-218', [27] 28 Dactylonectria_torresensis_CBS_129086, [28] 29 'Dactylonectria torresensis Cy-FO-28', [29] 30 'Dactylonectria torresensis Cy-FO-12 Cy-FO-227', [30] 31 'Dactylonectria torresensis Cy-FO-205', [31] 32 'Dactylonectria torresensis Cy-FO-2 Cy-FO-54', [32] 33 'Dactylonectria torresensis Cy-FO-43 Cy-FO-65 Cy-FO-127 Cy-FO-206', [33] 34 'Dactylonectria torresensis Cy-FO-64', [34] 35 Dactylonectria_pinicola_CBS_159.34, [35] 36 Dactylonectria_pinicola_CBS_173.37, [36] 37 'Dactylonectria pinicola Cy-FO-177', [37] 38 Dactylonectria_estremocensis_CBS_129085, [38] 39 Dactylonectria_estremocensis_CPC_13539, [39] 40 Ilyonectria_capensis_CBS_132815, [40] 41 'Ilyonectria capensis Cy-FO-63 Cy-FO-129 Cy-FO-184', [41] 42 Ilyonectria_capensis_CBS_132816, [42] 43 Ilyonectria_venezuelensis_CBS_102032, [43] 44 Ilyonectria_europaea_CBS_129078, [44] 45 Ilyonectria_europaea_CBS_102892, [45] 46 Ilyonectria_robusta_CBS_129084, [46] 47 'Ilyonectria robusta Cy-FO-217 Cy-FO-219', [47] 48 Ilyonectria_robusta_CBS_308.35, [48] 49 Ilyonectria_vredehoekensis_CBS_132807, [49] 50 Ilyonectria_vredehoekensis_CBS_132814, [50] 51 Ilyonectria_cyclaminicola_CBS_302.93, [51] 52 'Ilyonectria cyclaminicola Cy-FO-67', [52] 53 Ilyonectria_crassa_CBS_158.31, [53] 54 Ilyonectria_crassa_CBS_129083, [54] 55 Ilyonectria_rufa_CBS_153.37, [55] 56 'Ilyonectria rufa Cy-FO-53', [56] 57 Ilyonectria_rufa_CBS_640.77, [57] 58 'Ilyonectria rufa Cy-FO-161', [58] 59 'Ilyonectria rufa Cy-FO-17', [59] 60 'Ilyonectria rufa Cy-FO-4 Cy-FO-128 Cy-FO-130', [60] 61 'Ilyonectria rufa Cy-FO-8 Cy-FO-179', [61] 62 'Ilyonectria rufa Cy-FO-7', [62] 63 Ilyonectria_pseudodestructans_CBS_129081, [63] 64 Ilyonectria_pseudodestructans_CBS_117824, [64] 65 'Ilyonectria pseudodestructans Cy-FO-71', [65] 66 Ilyonectria_gamsii_CBS_940.97, [66] 67 Ilyonectria_liliigena_CBS_189.49, [67] 68 Ilyonectria_liliigena_CBS_732.74, [68] 69 Ilyonectria_leucospermi_CBS_132809, [69] 70 Ilyonectria_leucospermi_CBS_132810, [70] 71 'Ilyonectria ilicicola Cy-FO-224 Cy-FO-225 Cy-FO-226', [71] 72 Ilyonectria_protearum_CBS_132811, [72] 73 Ilyonectria_protearum_CBS_132812, [73] 74 Ilyonectria_panacis_CBS_129079, [74] 75 'Ilyonectria mors-panacis CBS 124662', [75] 76 'Ilyonectria mors-panacis CBS 306.35', [76] 77 Ilyonectria_liriodendri_CBS_110.81, [77] 78 Ilyonectria_liriodendri_CBS_117527, [78] 79 'Ilyonectria liriodendri Cy-FO-132 Cy-FO-142', [79] 80 'Ilyonectria liriodendri Cy-FO-50 Cy-FO-52 Cy-FO-57 Cy-FO-68 Cy-FO-136', [80] 81 'Ilyonectria liriodendri Cy-FO-183', [81] 82 'Ilyonectria liriodendri Cy-FO-221', [82] 83 Ilyonectria_lusitanica_CBS_129080, [83] 84 Ilyonectria_palmarum_CBS_135754, [84] 85 Ilyonectria_palmarum_CBS_135753, [85] 86 Ilyonectria_destructans_CBS_264.65, [86] 87 Ilyonectria_coprosmae_CBS_119606, [87] 88 Cylindrodendrum_alicantinum_CBS_139518, [88] 89 'Cylindrodendrum alicantinum Cyl-11', [89] 90 'Cylindrodendrum alicantinum Cy-FO-25', [90] 91 Cylindrodendrum_album_CBS_110655, [91] 92 Cylindrodendrum_album_CBS_301.83, [92] 93 'Neonectria quercicola Cy-FO-3', [93] 94 Neonectria_quercicola_CR21, [94] 95 Neonectria_quercicola_CPC13530, [95] 96 Neonectria_quercicola_CPC_13531, [96] 97 Neonectria_sp.1_CPC_13545, [97] 98 Neonectria_candida_CBS_182.36, [98] 99 Neonectria_candida_CBS_151.29, [99] 100 Cylindrodendrum_hubeiense_CBS_124071, [100] 101 Cylindrodendrum_hubeiense_CBS_129.97, [101] 102 Neonectria_obtusispora_CPC_13544, [102] 103 Neonectria_obtusispora_CBS_183.36, [103] 104 Neonectria_neomacrospora_CBS_503.67, [104] 105 Neonectria_neomacrospora_CBS_324.61, [105] 106 Neonectria_neomacrospora_CBS_118984, [106] 107 Neonectria_ditissima_CBS_226.31, [107] 108 Neonectria_ditissima_CBS_835.97, [108] 109 Neonectria_major_CBS_240.29, [109] 110 Campylocarpon_fasciculare_CBS_112613, [110] 111 Campylocarpon_pseudofasciculare_CBS_112679; TREE 'RaXML_his3_Fig2' = (((((101:0.002174322730794313,100:0.00000100000050002909):0.05956471048404566[%bootstrapFrequency = 100 ],((92:0.061164089828850965,91:0.033528161305362236):0.028280424407006143[%bootstrapFrequency = 56 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],4:0.08285971914117432):0.023699638863390226[%bootstrapFrequency = 82 ]):0.018621839340285034[%bootstrapFrequency = 60 ]):0.07399376762556044[%bootstrapFrequency = 99 ]):0.07745019780773695[%bootstrapFrequency = 98 ]):0.12221320824290753[%bootstrapFrequency = 100 ],(110:0.058899753595810254,111:0.0612621316925133):0.12221320824290753[%bootstrapFrequency = 100 ]); END; BEGIN TREES; Title 'Fig2_his3_MrBayes'; ID 01604a75847c23; LINK Taxa = Taxa; TRANSLATE [0] 1 'Dactylonectria valentina Cy-FO-133', [1] 2 'Dactylonectria hispanica Cy-FO-45', [2] 3 Dactylonectria_hispanica_Cy228, [3] 4 Dactylonectria_vitis_CBS_129082, [4] 5 Dactylonectria_anthuriicola_CBS_564.95, [5] 6 Dactylonectria_pauciseptata_CBS_100819, [6] 7 Dactylonectria_pauciseptata_CBS_120171, [7] 8 'Dactylonectria pauciseptata Cy-FO-37 Cy-FO-38 Cy-FO-178', [8] 9 Dactylonectria_hordeicola_CBS_162.89, [9] 10 Dactylonectria_alcacerensis_Cy134, [10] 11 Dactylonectria_alcacerensis_CBS_129087, [11] 12 Dactylonectria_macrodidyma_CBS_112601, [12] 13 'Dactylonectria macrodidyma Cy-FO-23 Cy-FO-24 Cy-FO-26 Cy-FO-29 Cy-FO-30 Cy-FO-31 Cy-FO-48 Cy-FO-51', [13] 14 'Dactylonectria macrodidyma Cy-FO-55 Cy-FO-61 Cy-FO-134 Cy-FO-147 Cy-FO-160 Cy-FO-195 Cy-FO-223', [14] 15 'Dactylonectria macrodidyma Cy-FO-1 Cy-FO-9 Cy-FO-10 Cy-FO-13 Cy-FO-18 Cy-FO-19 Cy-FO-20', [15] 16 Dactylonectria_macrodidyma_CBS_112615, [16] 17 'Dactylonectria macrodidyma Cy-FO-32 Cy-FO-34 Cy-FO-154', [17] 18 Dactylonectria_novozelandica_CBS_112608, [18] 19 Dactylonectria_novozelandica_CBS_113552, [19] 20 'Dactylonectria novozelandica Cy-FO-153 Cy-FO-180 Cy-FO-188 Cy-FO-191 Cy-FO-210 Cy-FO-211', [20] 21 'Dactylonectria novozelandica Cy-FO-22 Cy-FO-27 Cy-FO-36 Cy-FO-40 Cy-FO-41 Cy-FO-44', [21] 22 'Dactylonectria novozelandica Cy-FO-46 Cy-FO-47 Cy-FO-56 Cy-FO-60 Cy-FO-137 Cy-FO-146', [22] 23 'Dactylonectria novozelandica Cy-FO-5 Cy-FO-6 Cy-FO-11 Cy-FO-14 Cy-FO-15 Cy-FO-16 Cy-FO-21', [23] 24 'Dactylonectria novozelandica Cy-FO-33 Cy-FO-222', [24] 25 'Dactylonectria novozelandica Cy-FO-35 Cy-FO-59 Cy-FO-66', [25] 26 Dactylonectria_torresensis_CBS_119.41, [26] 27 'Dactylonectria torresensis Cy-FO-218', [27] 28 Dactylonectria_torresensis_CBS_129086, [28] 29 'Dactylonectria torresensis Cy-FO-28', [29] 30 'Dactylonectria torresensis Cy-FO-12 Cy-FO-227', [30] 31 'Dactylonectria torresensis Cy-FO-205', [31] 32 'Dactylonectria torresensis Cy-FO-2 Cy-FO-54', [32] 33 'Dactylonectria torresensis Cy-FO-43 Cy-FO-65 Cy-FO-127 Cy-FO-206', [33] 34 'Dactylonectria torresensis Cy-FO-64', [34] 35 Dactylonectria_pinicola_CBS_159.34, [35] 36 Dactylonectria_pinicola_CBS_173.37, [36] 37 'Dactylonectria pinicola Cy-FO-177', [37] 38 Dactylonectria_estremocensis_CBS_129085, [38] 39 Dactylonectria_estremocensis_CPC_13539, [39] 40 Ilyonectria_capensis_CBS_132815, [40] 41 'Ilyonectria capensis Cy-FO-63 Cy-FO-129 Cy-FO-184', [41] 42 Ilyonectria_capensis_CBS_132816, [42] 43 Ilyonectria_venezuelensis_CBS_102032, [43] 44 Ilyonectria_europaea_CBS_129078, [44] 45 Ilyonectria_europaea_CBS_102892, [45] 46 Ilyonectria_robusta_CBS_129084, [46] 47 'Ilyonectria robusta Cy-FO-217 Cy-FO-219', [47] 48 Ilyonectria_robusta_CBS_308.35, [48] 49 Ilyonectria_vredehoekensis_CBS_132807, [49] 50 Ilyonectria_vredehoekensis_CBS_132814, [50] 51 Ilyonectria_cyclaminicola_CBS_302.93, [51] 52 'Ilyonectria cyclaminicola Cy-FO-67', [52] 53 Ilyonectria_crassa_CBS_158.31, [53] 54 Ilyonectria_crassa_CBS_129083, [54] 55 Ilyonectria_rufa_CBS_153.37, [55] 56 'Ilyonectria rufa Cy-FO-53', [56] 57 Ilyonectria_rufa_CBS_640.77, [57] 58 'Ilyonectria rufa Cy-FO-161', [58] 59 'Ilyonectria rufa Cy-FO-17', [59] 60 'Ilyonectria rufa Cy-FO-4 Cy-FO-128 Cy-FO-130', [60] 61 'Ilyonectria rufa Cy-FO-8 Cy-FO-179', [61] 62 'Ilyonectria rufa Cy-FO-7', [62] 63 Ilyonectria_pseudodestructans_CBS_129081, [63] 64 Ilyonectria_pseudodestructans_CBS_117824, [64] 65 'Ilyonectria pseudodestructans Cy-FO-71', [65] 66 Ilyonectria_gamsii_CBS_940.97, [66] 67 Ilyonectria_liliigena_CBS_189.49, [67] 68 Ilyonectria_liliigena_CBS_732.74, [68] 69 Ilyonectria_leucospermi_CBS_132809, [69] 70 Ilyonectria_leucospermi_CBS_132810, [70] 71 'Ilyonectria ilicicola Cy-FO-224 Cy-FO-225 Cy-FO-226', [71] 72 Ilyonectria_protearum_CBS_132811, [72] 73 Ilyonectria_protearum_CBS_132812, [73] 74 Ilyonectria_panacis_CBS_129079, [74] 75 'Ilyonectria mors-panacis CBS 124662', [75] 76 'Ilyonectria mors-panacis CBS 306.35', [76] 77 Ilyonectria_liriodendri_CBS_110.81, [77] 78 Ilyonectria_liriodendri_CBS_117527, [78] 79 'Ilyonectria liriodendri Cy-FO-132 Cy-FO-142', [79] 80 'Ilyonectria liriodendri Cy-FO-50 Cy-FO-52 Cy-FO-57 Cy-FO-68 Cy-FO-136', [80] 81 'Ilyonectria liriodendri Cy-FO-183', [81] 82 'Ilyonectria liriodendri Cy-FO-221', [82] 83 Ilyonectria_lusitanica_CBS_129080, [83] 84 Ilyonectria_palmarum_CBS_135754, [84] 85 Ilyonectria_palmarum_CBS_135753, [85] 86 Ilyonectria_destructans_CBS_264.65, [86] 87 Ilyonectria_coprosmae_CBS_119606, [87] 88 Cylindrodendrum_alicantinum_CBS_139518, [88] 89 'Cylindrodendrum alicantinum Cyl-11', [89] 90 'Cylindrodendrum alicantinum Cy-FO-25', [90] 91 Cylindrodendrum_album_CBS_110655, [91] 92 Cylindrodendrum_album_CBS_301.83, [92] 93 'Neonectria quercicola Cy-FO-3', [93] 94 Neonectria_quercicola_CR21, [94] 95 Neonectria_quercicola_CPC13530, [95] 96 Neonectria_quercicola_CPC_13531, [96] 97 Neonectria_sp.1_CPC_13545, [97] 98 Neonectria_candida_CBS_182.36, [98] 99 Neonectria_candida_CBS_151.29, [99] 100 Cylindrodendrum_hubeiense_CBS_124071, [100] 101 Cylindrodendrum_hubeiense_CBS_129.97, [101] 102 Neonectria_obtusispora_CPC_13544, [102] 103 Neonectria_obtusispora_CBS_183.36, [103] 104 Neonectria_neomacrospora_CBS_503.67, [104] 105 Neonectria_neomacrospora_CBS_324.61, [105] 106 Neonectria_neomacrospora_CBS_118984, [106] 107 Neonectria_ditissima_CBS_226.31, [107] 108 Neonectria_ditissima_CBS_835.97, [108] 109 Neonectria_major_CBS_240.29, [109] 110 Campylocarpon_fasciculare_CBS_112613, [110] 111 Campylocarpon_pseudofasciculare_CBS_112679; TREE 'con 50 majrule_his3_Fig2' = (110:0.08649659,111:0.1088809,((((6:0.003105513,7:0.0029395,8:0.003113444):0.09555977[%posteriorProbability = 1 ],((4:0.1290996,(1:0.01150597,(2:0.002898309,3:0.002942971):0.01578126[%posteriorProbability = 0.988 ]):0.03005815[%posteriorProbability = 0.966 ]):0.04054053[%posteriorProbability = 0.933 ],5:0.05555213):0.03631571[%posteriorProbability = 0.806 ]):0.1241016[%posteriorProbability = 1 ],(((((((12:0.003167508,(16:0.002712502,17:0.003097857):0.01518413[%posteriorProbability = 1 ]):0.006655317[%posteriorProbability = 0.855 ],15:0.002869546,13:0.002774201,14:0.003061833):0.02999053[%posteriorProbability = 1 ],((18:0.00277962,19:0.002839285,20:0.002982695,21:0.002786809,24:0.00280378,22:0.002745235,23:0.002909816):0.006953647[%posteriorProbability = 0.715 ],25:0.01247438):0.01764278[%posteriorProbability = 0.991 ]):0.01444728[%posteriorProbability = 0.886 ],((26:0.003107489,27:0.002886455):0.006839633[%posteriorProbability = 0.906 ],28:0.002839613,30:0.01017064,(32:0.006546124,33:0.00274188,34:0.00276005):0.006704564[%posteriorProbability = 0.987 ],31:0.01073268,29:0.002649284):0.01601204[%posteriorProbability = 0.896 ]):0.01854135[%posteriorProbability = 0.52 ],(11:0.007370275,10:0.006586989):0.03406189[%posteriorProbability = 0.99 ]):0.1022398[%posteriorProbability = 1 ],((38:0.003063581,39:0.002819629):0.1208024[%posteriorProbability = 1 ],(35:0.003011475,36:0.002955641,37:0.002955465):0.09173157[%posteriorProbability = 1 ]):0.03891866[%posteriorProbability = 0.764 ]):0.07303496[%posteriorProbability = 1 ],9:0.1020067):0.02962598[%posteriorProbability = 0.678 ]):0.1071855[%posteriorProbability = 0.999 ],((((((((((43:0.04289506,((40:0.0027344,42:0.00620581):0.006428416[%posteriorProbability = 0.877 ],41:0.006653562):0.05082697[%posteriorProbability = 1 ]):0.02970139[%posteriorProbability = 0.999 ],(((45:0.002679135,44:0.002628767):0.04731915[%posteriorProbability = 1 ],(46:0.002812399,48:0.01062611,47:0.006707283):0.01824785[%posteriorProbability = 0.996 ]):0.01450524[%posteriorProbability = 0.921 ],(49:0.002937527,50:0.002758613):0.06186931[%posteriorProbability = 1 ]):0.01001255[%posteriorProbability = 0.629 ]):0.04130597[%posteriorProbability = 1 ],(69:0.002669849,70:0.002579521):0.02579317[%posteriorProbability = 1 ],((72:0.002711708,73:0.002682634):0.01792767[%posteriorProbability = 1 ],71:0.02698924):0.0156961[%posteriorProbability = 0.993 ]):0.01261127[%posteriorProbability = 0.695 ],(51:0.01045193,52:0.009837605):0.02411771[%posteriorProbability = 1 ]):0.01858832[%posteriorProbability = 0.997 ],((67:0.002799595,68:0.002781808):0.01746508[%posteriorProbability = 1 ],66:0.05023623):0.009404509[%posteriorProbability = 0.713 ]):0.01007118[%posteriorProbability = 0.705 ],((64:0.002771704,63:0.002478356,65:0.01041013):0.01769036[%posteriorProbability = 0.998 ],74:0.06039858,((54:0.002543353,53:0.002648392):0.02214645[%posteriorProbability = 1 ],(((55:0.002830904,56:0.002798795):0.006234854[%posteriorProbability = 0.943 ],57:0.002800396,58:0.002734568):0.006062617[%posteriorProbability = 0.91 ],59:0.002513533,60:0.006634073,62:0.01006446,61:0.006449095):0.0132467[%posteriorProbability = 0.852 ]):0.008026683[%posteriorProbability = 0.521 ]):0.01363797[%posteriorProbability = 0.776 ]):0.02652901[%posteriorProbability = 0.73 ],87:0.16113):0.02483268[%posteriorProbability = 0.566 ],((((77:0.006724719,78:0.002655785,79:0.002670013,80:0.006542071):0.006672977[%posteriorProbability = 0.806 ],82:0.008488563):0.008292942[%posteriorProbability = 0.833 ],81:0.01448376):0.04002003[%posteriorProbability = 1 ],(75:0.002591848,76:0.002467156):0.03851566[%posteriorProbability = 1 ],83:0.06207655,(85:0.00265374,84:0.002571798):0.04614053[%posteriorProbability = 1 ],86:0.05383055):0.02702596[%posteriorProbability = 0.664 ]):0.1787601[%posteriorProbability = 1 ],((106:0.03808812,(105:0.002838288,104:0.00281851):0.07286729[%posteriorProbability = 1 ]):0.177298[%posteriorProbability = 1 ],((99:0.003155363,98:0.002929318):0.0508641[%posteriorProbability = 1 ],(((95:0.002774122,94:0.002944436):0.007036707[%posteriorProbability = 0.971 ],96:0.01351527,93:0.02213877):0.1163292[%posteriorProbability = 1 ],97:0.03282374):0.01465855[%posteriorProbability = 0.862 ]):0.05383466[%posteriorProbability = 0.99 ],(103:0.005575964,102:0.009008748):0.1477139[%posteriorProbability = 1 ],((107:0.01011535,108:0.01731771):0.02797043[%posteriorProbability = 0.936 ],109:0.08201615):0.1099861[%posteriorProbability = 1 ]):0.05552368[%posteriorProbability = 0.985 ]):0.03952834[%posteriorProbability = 0.929 ],(((91:0.05997533,92:0.0973654):0.05088637[%posteriorProbability = 0.997 ],(88:0.002822709,90:0.002715771,89:0.002769147):0.1002249[%posteriorProbability = 1 ]):0.03905479[%posteriorProbability = 0.936 ],(100:0.003800967,101:0.005262264):0.102155[%posteriorProbability = 1 ]):0.02883312[%posteriorProbability = 0.697 ]):0.1049492[%posteriorProbability = 1 ]):0.2997781[%posteriorProbability = 1 ])[% ] [% ] [% setBetweenDouble = posteriorProbability ]; TREE 'con 50 majrule_his3_Fig2' = (110:0.08649659,111:0.1088809,((((6:0.003105513,7:0.0029395,8:0.003113444):0.09555977,((4:0.1290996,(1:0.01150597,(2:0.002898309,3:0.002942971):0.01578126):0.03005815):0.04054053,5:0.05555213):0.03631571):0.1241016,(((((((12:0.003167508,(16:0.002712502,17:0.003097857):0.01518413):0.006655317,15:0.002869546,13:0.002774201,14:0.003061833):0.02999053,((18:0.00277962,19:0.002839285,20:0.002982695,21:0.002786809,24:0.00280378,22:0.002745235,23:0.002909816):0.006953647,25:0.01247438):0.01764278):0.01444728,((26:0.003107489,27:0.002886455):0.006839633,28:0.002839613,30:0.01017064,(32:0.006546124,33:0.00274188,34:0.00276005):0.006704564,31:0.01073268,29:0.002649284):0.01601204):0.01854135,(11:0.007370275,10:0.006586989):0.03406189):0.1022398,((38:0.003063581,39:0.002819629):0.1208024,(35:0.003011475,36:0.002955641,37:0.002955465):0.09173157):0.03891866):0.07303496,9:0.1020067):0.02962598):0.1071855,((((((((((43:0.04289506,((40:0.0027344,42:0.00620581):0.006428416,41:0.006653562):0.05082697):0.02970139,(((45:0.002679135,44:0.002628767):0.04731915,(46:0.002812399,48:0.01062611,47:0.006707283):0.01824785):0.01450524,(49:0.002937527,50:0.002758613):0.06186931):0.01001255):0.04130597,(69:0.002669849,70:0.002579521):0.02579317,((72:0.002711708,73:0.002682634):0.01792767,71:0.02698924):0.0156961):0.01261127,(51:0.01045193,52:0.009837605):0.02411771):0.01858832,((67:0.002799595,68:0.002781808):0.01746508,66:0.05023623):0.009404509):0.01007118,((64:0.002771704,63:0.002478356,65:0.01041013):0.01769036,74:0.06039858,((54:0.002543353,53:0.002648392):0.02214645,(((55:0.002830904,56:0.002798795):0.006234854,57:0.002800396,58:0.002734568):0.006062617,59:0.002513533,60:0.006634073,62:0.01006446,61:0.006449095):0.0132467):0.008026683):0.01363797):0.02652901,87:0.16113):0.02483268,((((77:0.006724719,78:0.002655785,79:0.002670013,80:0.006542071):0.006672977,82:0.008488563):0.008292942,81:0.01448376):0.04002003,(75:0.002591848,76:0.002467156):0.03851566,83:0.06207655,(85:0.00265374,84:0.002571798):0.04614053,86:0.05383055):0.02702596):0.1787601,((106:0.03808812,(105:0.002838288,104:0.00281851):0.07286729):0.177298,((99:0.003155363,98:0.002929318):0.0508641,(((95:0.002774122,94:0.002944436):0.007036707,96:0.01351527,93:0.02213877):0.1163292,97:0.03282374):0.01465855):0.05383466,(103:0.005575964,102:0.009008748):0.1477139,((107:0.01011535,108:0.01731771):0.02797043,109:0.08201615):0.1099861):0.05552368):0.03952834,(((91:0.05997533,92:0.0973654):0.05088637,(88:0.002822709,90:0.002715771,89:0.002769147):0.1002249):0.03905479,(100:0.003800967,101:0.005262264):0.102155):0.02883312):0.1049492):0.2997781); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1513943623999; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4563881549828125670; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4175401067506151479; mqVersion 331; checksumv 0 3 2732123471 null getNumChars 428 numChars 428 getNumTaxa 111 numTaxa 111 short true bits 1152921504606846991 states 15 sumSquaresStatesOnly 750974.0 sumSquares 1.1031152956078312E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 278; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1280 681; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4563881549828125670 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4563881549828125670; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 731; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 14; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; endTell; showWindow; endTell; showTrees 1 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 2; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4563881549828125670 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 01604b776f7e5; toggleUseWeights off; endTell; setAssignedID 1072.1513094616381.4010014460470133824; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #4563881549828125670 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 2; setTreeBlockID 01604a75847c23; toggleUseWeights off; endTell; setAssignedID 1125.1513943564860.8760631444972175108; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4175401067506151479 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1002 609; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;