#NEXUS [written Tue Aug 12 12:45:22 CEST 2014 by Mesquite version 2.74 (build 550) at DSK-CROU-012/10.136.102.32] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=181; TAXLABELS Alternaria_anagallidis_CBS_101004_ Alternaria_calendulae_CBS_101498_ Alternaria_dauci_CBS_101592_ Alternaria_cichorii_CBS_102_33_ Alternaria_crassa_CBS_103_18_ Alternaria_citrullicola_CBS_103_32 Alternaria_scorzonerae_CBS_103_46_ Alternaria_linariae_CBS_105_41 Alternaria_alternariacida_CBS_105_51 Alternaria_solani_CBS_106_21 Alternaria_macrospora_CBS_106_29_ Alternaria_dauci_CBS_106_48_ Alternaria_allii_CBS_107_28_ Alternaria_gypsophilae_CBS_107_41_ Alternaria_anagallidis_CBS_107_44_ Alternaria_zinniae_CBS_107_48_ Alternaria_linariae_CBS_107_61 Alternaria_linariae_CBS_108_53 Alternaria_zinniae_CBS_108_61_ Alternaria_allii_CBS_109_41_ Alternaria_solani_nigri_CBS_109155_ Alternaria_linariae_CBS_109156 Alternaria_solani_CBS_109157 Alternaria_grandis_CBS_109158_ Alternaria_crassa_CBS_109160_ Alternaria_linariae_CBS_109161_ Alternaria_crassa_CBS_109162_ Alternaria_nitrimali_CBS_109163_ Alternaria_linariae_CBS_109164_ Alternaria_crassa_CBS_110_38_ Alternaria_deserticola_CBS_110799_ Alternaria_dauci_CBS_111_38_ Alternaria_solani_CBS_111_41_ Alternaria_solani_CBS_111_44_ Alternaria_passiflorae_CBS_113_38 Alternaria_cirsinoxia_CBS_113261_ Alternaria_solani_nigri_CBS_113403_ Alternaria_sesami_CBS115264_ Alternaria_cucumerina_CBS_116114_ Alternaria_pipionipisi_CBS_116115_ Alternaria_tillandsiae_CBS_116116_ Alternaria_echinaceae_CBS_116117_ Alternaria_echinaceae_CBS_116118_ Alternaria_cassiae_CBS_116119_ Alternaria_novae_guineensis_CBS_116120_ Alternaria_venezuelensis_CBS_116121_ Alternaria_ranunculi_CBS_116330_ Alternaria_thunbergiae_CBS116331_ Alternaria_solani_nigri_CBS_116332 Alternaria_passiflorae_CBS_116333_ Alternaria_solani_nigri_CBS_116334 Alternaria_protenta_CBS_116437 Alternaria_linariae_CBS_116438 Alternaria_calendulae_CBS_116439_ Alternaria_carthami_CBS_116440 Alternaria_linariae_CBS_116441 Alternaria_solani_CBS_116442 Alternaria_azadirachtae_CBS_116444 Alternaria_azadirachtae_CBS_116445 Alternaria_centaureae_CBS_116446 Alternaria_solani_nigri_CBS_116447 Alternaria_crassa_CBS_116647 Alternaria_crassa_CBS_116648 Alternaria_porri_CBS_116649 Alternaria_calendulae_CBS_116650 Alternaria_protenta_CBS_116651 Alternaria_paralinicola_CBS_116652 Alternaria_grandis_CBS_116695 Alternaria_protenta_CBS_116696 Alternaria_protenta_CBS_116697 Alternaria_porri_CBS_116698 Alternaria_porri_CBS_116699 Alternaria_allii_CBS_116701 Alternaria_scorzonerae_CBS_116703 Alternaria_linariae_CBS_116704 Alternaria_zinniae_CBS_117_59 Alternaria_carthami_CBS_117091 Alternaria_carthamicola_CBS_117092 Alternaria_bataticola_CBS_117095 Alternaria_bataticola_CBS_117096 Alternaria_dauci_CBS_117097 Alternaria_dauci_CBS_117098 Alternaria_dauci_CBS_117099 Alternaria_dauci_CBS_117100 Alternaria_solani_nigri_CBS117101 Alternaria_passiflorae_CBS_117102 Alternaria_passiflorae_CBS_117103 Alternaria_dichondrae_CBS_117127 Alternaria_anagallidis_CBS_117128 Alternaria_anagallidis_CBS_117129 Alternaria_blumeae_CBS_117215 Alternaria_tropica_CBS_117216 Alternaria_tagetica_CBS_117217 Alternaria_cichorii_CBS_117218 Alternaria_cyamopsidis_CBS_117219 Alternaria_agerati_CBS_117221 Alternaria_argyroxiphii_CBS_117222 Alternaria_zinniae_CBS_117223 Alternaria_cassiae_CBS_117224 Alternaria_cucumerina_CBS_117225 Alternaria_cucumerina_CBS_117226 Alternaria_macrospora_CBS_117228 Alternaria_ricini_CBS_117361 Alternaria_steviae_CBS_117362 Alternaria_blumeae_CBS_117364 Alternaria_pipionipisi_CBS_117365 Alternaria_rostellata_CBS_117366 Alternaria_obtecta_CBS_117367 Alternaria_cassiae_CBS_117369 Alternaria_sidae_CBS_117730 Alternaria_zinniae_CBS_118_44 Alternaria_pseudorostrata_CBS_119411 Alternaria_thunbergiae_CBS_120986 Alternaria_protenta_CBS_121342 Alternaria_montanica_CBS_121343 Alternaria_allii_CBS_121345 Alternaria_solani_nigri_CBS_121347 Alternaria_crassa_CBS_122590 Alternaria_thunbergiae_CBS_122597 Alternaria_euphorbiicola_CBS_133874 Alternaria_silybi_CBS_134092 Alternaria_silybi_CBS_134093 Alternaria_silybi_CBS_134094 Alternaria_pipionipisi_CBS_134265 Alternaria_obtecta_CBS_134278 Alternaria_protenta_CBS_135189 Alternaria_passiflorae_CBS_166_77 Alternaria_euphorbiicola_CBS_198_86 Alternaria_dichondrae_CBS_199_74 Alternaria_dichondrae_CBS_200_74 Alternaria_ricini_CBS_215_31_ Alternaria_ipomoeae_CBS_219_79_ Alternaria_calendulae_CBS_224_76 Alternaria_allii_CBS_225_76 Alternaria_sesami_CBS_240_73 Alternaria_tagetica_CBS_297_79 Alternaria_tagetica_CBS_298_79 Alternaria_zinniae_CBS_299_79 Alternaria_zinniae_CBS_300_79 Alternaria_dauci_CBS_345_79 Alternaria_dichondrae_CBS_346_79 Alternaria_protenta_CBS_347_79 Alternaria_ricini_CBS_353_86 Alternaria_cyamopsidis_CBS_364_67 Alternaria_sennae_CBS_477_81 Alternaria_dauci_CBS_477_83 Alternaria_cassiae_CBS_478_81 Alternaria_scorzonerae_CBS_478_83 Alternaria_tagetica_CBS_479_81 Alternaria_tagetica_CBS_480_81 Alternaria_limicola_CBS_483_90 Alternaria_bataticola_CBS_531_63 Alternaria_bataticola_CBS_532_63_ Alternaria_acalyphicola_CBS_541_94 Alternaria_agripestis_CBS_577_94 Alternaria_aragakii_CBS_594_93 Alternaria_passiflorae_CBS_629_93 Alternaria_passiflorae_CBS_630_93_ _Alternaria_steviae_CBS_631_88 Alternaria_tropica_CBS_631_93 Alternaria_steviae_CBS_632_88 Alternaria_carthami_CBS_635_80 Alternaria_multirostrata_CBS_712_68 Alternaria_multirostrata_CBS_713_68 Alternaria_jesenskae_CBS_133855 Alternaria_linariae_CPC_21620 Alternaria_bataticola_PPRI_10502 Alternaria_neoipomoeae_PPRI_11845 Alternaria_neoipomoeae_PPRI_11847 Alternaria_argyroxiphii_PPRI_11848 Alternaria_bataticola_PPRI_11930 Alternaria_bataticola_PPRI_11931 Alternaria_bataticola_PPRI_11934 Alternaria_argyroxiphii_PPRI_11971 Alternaria_neoipomoeae_PPRI_13903 Alternaria_ipomoeae_PPRI_8988 Alternaria_neoipomoeae_PPRI_8990 Alternaria_conidiophora_CBS_137457 Alternaria_catananches_CBS_137456 Alternaria_novae_guineensis_PPRI_12171 Alternaria_anodae_PPRI_12376 ; END; BEGIN TREES; Title MrBayes_Alta1; LINK Taxa = Taxa; TRANSLATE 1 Alternaria_anagallidis_CBS_101004_, 2 Alternaria_calendulae_CBS_101498_, 3 Alternaria_dauci_CBS_101592_, 4 Alternaria_cichorii_CBS_102_33_, 5 Alternaria_crassa_CBS_103_18_, 6 Alternaria_citrullicola_CBS_103_32, 7 Alternaria_scorzonerae_CBS_103_46_, 8 Alternaria_linariae_CBS_105_41, 9 Alternaria_alternariacida_CBS_105_51, 10 Alternaria_solani_CBS_106_21, 11 Alternaria_macrospora_CBS_106_29_, 12 Alternaria_dauci_CBS_106_48_, 13 Alternaria_allii_CBS_107_28_, 14 Alternaria_gypsophilae_CBS_107_41_, 15 Alternaria_anagallidis_CBS_107_44_, 16 Alternaria_zinniae_CBS_107_48_, 17 Alternaria_linariae_CBS_107_61, 18 Alternaria_linariae_CBS_108_53, 19 Alternaria_zinniae_CBS_108_61_, 20 Alternaria_allii_CBS_109_41_, 21 Alternaria_solani_nigri_CBS_109155_, 22 Alternaria_linariae_CBS_109156, 23 Alternaria_solani_CBS_109157, 24 Alternaria_grandis_CBS_109158_, 25 Alternaria_crassa_CBS_109160_, 26 Alternaria_linariae_CBS_109161_, 27 Alternaria_crassa_CBS_109162_, 28 Alternaria_nitrimali_CBS_109163_, 29 Alternaria_linariae_CBS_109164_, 30 Alternaria_crassa_CBS_110_38_, 31 Alternaria_deserticola_CBS_110799_, 32 Alternaria_dauci_CBS_111_38_, 33 Alternaria_solani_CBS_111_41_, 34 Alternaria_solani_CBS_111_44_, 35 Alternaria_passiflorae_CBS_113_38, 36 Alternaria_cirsinoxia_CBS_113261_, 37 Alternaria_solani_nigri_CBS_113403_, 38 Alternaria_sesami_CBS115264_, 39 Alternaria_cucumerina_CBS_116114_, 40 Alternaria_pipionipisi_CBS_116115_, 41 Alternaria_tillandsiae_CBS_116116_, 42 Alternaria_echinaceae_CBS_116117_, 43 Alternaria_echinaceae_CBS_116118_, 44 Alternaria_cassiae_CBS_116119_, 45 Alternaria_novae_guineensis_CBS_116120_, 46 Alternaria_venezuelensis_CBS_116121_, 47 Alternaria_ranunculi_CBS_116330_, 48 Alternaria_thunbergiae_CBS116331_, 49 Alternaria_solani_nigri_CBS_116332, 50 Alternaria_passiflorae_CBS_116333_, 51 Alternaria_solani_nigri_CBS_116334, 52 Alternaria_protenta_CBS_116437, 53 Alternaria_linariae_CBS_116438, 54 Alternaria_calendulae_CBS_116439_, 55 Alternaria_carthami_CBS_116440, 56 Alternaria_linariae_CBS_116441, 57 Alternaria_solani_CBS_116442, 58 Alternaria_azadirachtae_CBS_116444, 59 Alternaria_azadirachtae_CBS_116445, 60 Alternaria_centaureae_CBS_116446, 61 Alternaria_solani_nigri_CBS_116447, 62 Alternaria_crassa_CBS_116647, 63 Alternaria_crassa_CBS_116648, 64 Alternaria_porri_CBS_116649, 65 Alternaria_calendulae_CBS_116650, 66 Alternaria_protenta_CBS_116651, 67 Alternaria_paralinicola_CBS_116652, 68 Alternaria_grandis_CBS_116695, 69 Alternaria_protenta_CBS_116696, 70 Alternaria_protenta_CBS_116697, 71 Alternaria_porri_CBS_116698, 72 Alternaria_porri_CBS_116699, 73 Alternaria_allii_CBS_116701, 74 Alternaria_scorzonerae_CBS_116703, 75 Alternaria_linariae_CBS_116704, 76 Alternaria_zinniae_CBS_117_59, 77 Alternaria_carthami_CBS_117091, 78 Alternaria_carthamicola_CBS_117092, 79 Alternaria_bataticola_CBS_117095, 80 Alternaria_bataticola_CBS_117096, 81 Alternaria_dauci_CBS_117097, 82 Alternaria_dauci_CBS_117098, 83 Alternaria_dauci_CBS_117099, 84 Alternaria_dauci_CBS_117100, 85 Alternaria_solani_nigri_CBS117101, 86 Alternaria_passiflorae_CBS_117102, 87 Alternaria_passiflorae_CBS_117103, 88 Alternaria_dichondrae_CBS_117127, 89 Alternaria_anagallidis_CBS_117128, 90 Alternaria_anagallidis_CBS_117129, 91 Alternaria_blumeae_CBS_117215, 92 Alternaria_tropica_CBS_117216, 93 Alternaria_tagetica_CBS_117217, 94 Alternaria_cichorii_CBS_117218, 95 Alternaria_cyamopsidis_CBS_117219, 96 Alternaria_agerati_CBS_117221, 97 Alternaria_argyroxiphii_CBS_117222, 98 Alternaria_zinniae_CBS_117223, 99 Alternaria_cassiae_CBS_117224, 100 Alternaria_cucumerina_CBS_117225, 101 Alternaria_cucumerina_CBS_117226, 102 Alternaria_macrospora_CBS_117228, 103 Alternaria_ricini_CBS_117361, 104 Alternaria_steviae_CBS_117362, 105 Alternaria_blumeae_CBS_117364, 106 Alternaria_pipionipisi_CBS_117365, 107 Alternaria_rostellata_CBS_117366, 108 Alternaria_obtecta_CBS_117367, 109 Alternaria_cassiae_CBS_117369, 110 Alternaria_sidae_CBS_117730, 111 Alternaria_zinniae_CBS_118_44, 112 Alternaria_pseudorostrata_CBS_119411, 113 Alternaria_thunbergiae_CBS_120986, 114 Alternaria_protenta_CBS_121342, 115 Alternaria_montanica_CBS_121343, 116 Alternaria_allii_CBS_121345, 117 Alternaria_solani_nigri_CBS_121347, 118 Alternaria_crassa_CBS_122590, 119 Alternaria_thunbergiae_CBS_122597, 120 Alternaria_euphorbiicola_CBS_133874, 121 Alternaria_silybi_CBS_134092, 122 Alternaria_silybi_CBS_134093, 123 Alternaria_silybi_CBS_134094, 124 Alternaria_pipionipisi_CBS_134265, 125 Alternaria_obtecta_CBS_134278, 126 Alternaria_protenta_CBS_135189, 127 Alternaria_passiflorae_CBS_166_77, 128 Alternaria_euphorbiicola_CBS_198_86, 129 Alternaria_dichondrae_CBS_199_74, 130 Alternaria_dichondrae_CBS_200_74, 131 Alternaria_ricini_CBS_215_31_, 132 Alternaria_ipomoeae_CBS_219_79_, 133 Alternaria_calendulae_CBS_224_76, 134 Alternaria_allii_CBS_225_76, 135 Alternaria_sesami_CBS_240_73, 136 Alternaria_tagetica_CBS_297_79, 137 Alternaria_tagetica_CBS_298_79, 138 Alternaria_zinniae_CBS_299_79, 139 Alternaria_zinniae_CBS_300_79, 140 Alternaria_dauci_CBS_345_79, 141 Alternaria_dichondrae_CBS_346_79, 142 Alternaria_protenta_CBS_347_79, 143 Alternaria_ricini_CBS_353_86, 144 Alternaria_cyamopsidis_CBS_364_67, 145 Alternaria_sennae_CBS_477_81, 146 Alternaria_dauci_CBS_477_83, 147 Alternaria_cassiae_CBS_478_81, 148 Alternaria_scorzonerae_CBS_478_83, 149 Alternaria_tagetica_CBS_479_81, 150 Alternaria_tagetica_CBS_480_81, 151 Alternaria_limicola_CBS_483_90, 152 Alternaria_bataticola_CBS_531_63, 153 Alternaria_bataticola_CBS_532_63_, 154 Alternaria_acalyphicola_CBS_541_94, 155 Alternaria_agripestis_CBS_577_94, 156 Alternaria_aragakii_CBS_594_93, 157 Alternaria_passiflorae_CBS_629_93, 158 Alternaria_passiflorae_CBS_630_93_, 159 _Alternaria_steviae_CBS_631_88, 160 Alternaria_tropica_CBS_631_93, 161 Alternaria_steviae_CBS_632_88, 162 Alternaria_carthami_CBS_635_80, 163 Alternaria_multirostrata_CBS_712_68, 164 Alternaria_multirostrata_CBS_713_68, 165 Alternaria_jesenskae_CBS_133855, 166 Alternaria_linariae_CPC_21620, 167 Alternaria_bataticola_PPRI_10502, 168 Alternaria_neoipomoeae_PPRI_11845, 169 Alternaria_neoipomoeae_PPRI_11847, 170 Alternaria_argyroxiphii_PPRI_11848, 171 Alternaria_bataticola_PPRI_11930, 172 Alternaria_bataticola_PPRI_11931, 173 Alternaria_bataticola_PPRI_11934, 174 Alternaria_argyroxiphii_PPRI_11971, 175 Alternaria_neoipomoeae_PPRI_13903, 176 Alternaria_ipomoeae_PPRI_8988, 177 Alternaria_neoipomoeae_PPRI_8990, 178 Alternaria_conidiophora_CBS_137457, 179 Alternaria_catananches_CBS_137456, 180 Alternaria_novae_guineensis_PPRI_12171, 181 Alternaria_anodae_PPRI_12376; TREE MrBayes_Alt_a_1 = (14:4.209262927622409,((120:0.03923889000775221,128:0.03647768818836254)0.984:0.09609497910982732,151:0.09297127725879993)1.000:0.7832440044584232,((((((1:0.03906379529733424,15:0.08881982870018992,89:0.03928035802641207,90:0.03924860585918668)1.000:0.2787688150602038,(3:0.03686101487925862,12:0.03926151542616998,32:0.04188861409110528,81:0.04361507602302597,82:0.03876678703477157,83:0.04140347525941335,84:0.09887165213787386,140:0.03790882262710106,146:0.03781616343238825)1.000:0.2657451234219243)0.964:0.133570223792527,(45:0.04101391021040647,180:0.04029810562675869)1.000:0.2250835550886155,((79:0.03820927370977672,80:0.03745874069086781,152:0.03949531942436214,153:0.04071924187376431,167:0.04007866240481687,172:0.04031726670866476)1.000:0.2136928193146798,171:0.03922750691639562,173:0.03848233332079249)0.985:0.1418749349699736,((92:0.03869266896962191,160:0.03807298914616749)0.963:0.09929036235182627,(97:0.03843310056810281,170:0.04070856423983212,174:0.04214571704497929)1.000:0.2113991376601037)0.922:0.112517472039011)0.999:0.1578984635723619,((2:0.04066507006986483,54:0.04058165276801579,65:0.03733383752359407,133:0.03762633419499532)1.000:0.4955340580920622,(((4:0.03877805754106396,9:0.03978971427186039,(88:0.04102095834091778,129:0.03861027016546382,130:0.03879594668227344,141:0.03854453921975227)1.000:0.3049171383177249,148:0.03708672766904542,179:0.0378517568151372)0.791:0.1144947996758733,(7:0.03957347328360286,67:0.04270466431855618,74:0.04252473198047437)0.606:0.09955807573144125,(10:0.03999845578965671,23:0.03840739953585517,24:0.0373283363694035,33:0.03777827828557337,34:0.03906854880835581,52:0.037837374132399,57:0.04196876340286646,66:0.03905874183783537,68:0.03801677425160031,69:0.03837467908120578,70:0.04072531603650159,114:0.03939876554763477,126:0.03766267051356409,142:0.03585081374797336)0.996:0.1760692587991428)0.989:0.200220652516918,8:0.03926541645642175,17:0.04159560019127999,18:0.04378049847278463,(21:0.04175528595985299,37:0.04072665761726044,49:0.03607198149899044,51:0.0384291253314738,61:0.03929639632453217,85:0.04070431605710794,117:0.04135481912739202)0.617:0.1034535943533334,22:0.03871134042861783,26:0.03737160264778631,29:0.04087775410401778,35:0.03647806318282779,36:0.03960872270519186,38:0.04425491142442749,47:0.09891369559928201,50:0.04149496798472954,53:0.03784388025551942,55:0.04201311058302938,56:0.03640313094102957,60:0.09374951139648055,75:0.04120965174360287,77:0.03748430960177387,78:0.04079887228838106,86:0.04040680719554094,87:0.03960764689518193,94:0.03547263284417535,115:0.03896857492534341,121:0.03877830668197119,122:0.04024639868505618,123:0.0398585167688135,127:0.04013904709307065,135:0.04272063182434192,155:0.1605360661254105,157:0.03789255428549392,158:0.04185727867098169,162:0.03869351724426969,(163:0.04249640585868599,164:0.0398672291275535)0.982:0.09458379274750246,165:0.03832684112832971,166:0.03733347764703424,178:0.3391198795278412)0.904:0.180786652440576,(((((5:0.03788382395339893,25:0.04091973000792452,27:0.04058183724840091,30:0.0397032647503682,62:0.04132189654434574,63:0.03844517037070821,118:0.0383250337522379)0.991:0.1502492465007272,28:0.2135444197872554,(40:0.04066541351490551,106:0.03895915966544073,124:0.03979189147393547)1.000:0.2675334049882453)0.803:0.09210695808693795,6:0.09906473236183998,(11:0.03980041174013849,102:0.04153363507320215)0.968:0.09494218231980954,(16:0.04093320524846927,19:0.04117940496246218,44:0.03858554333929284,58:0.03948434699795424,59:0.03803852637893118,76:0.03800261493948173,(91:0.0404352951771234,96:0.03891426677556788,105:0.03957966383412984)0.995:0.09571012238468851,98:0.03896258692402802,99:0.03884712021491108,(109:0.09792251342516915,145:0.04129395404265382)0.986:0.09632010839773997,110:0.2575273626165513,111:0.04058536990115434,138:0.03885748682743484,139:0.03772417102418575,147:0.0425036883022663)0.782:0.09363865926680998,31:0.2085699063540939,(39:0.0941915759080564,46:0.04157687081331878,100:0.03970660164257497,101:0.04306035506061943,(103:0.04004762755695052,131:0.03925600932735793,143:0.03903090691397841,154:0.03814875393042274)0.964:0.0950890700188462,181:0.3355749233169156)0.674:0.09228758495924566,(48:0.03771113677717514,113:0.04255360827734224,119:0.04328662986698226)1.000:0.2099268557288126,(95:0.03940766061275049,144:0.04145770827728881)0.961:0.0979724737319042,107:0.09294654596837251,156:0.09721670956880375)1.000:0.2969653304800058,((13:0.03660743987916809,20:0.03803460412354792,64:0.03924558585263169,73:0.04027523618733313,116:0.03626156173963247,134:0.0399514405566282)0.928:0.09170807524558858,71:0.03715550090627564,72:0.04277815119560519)1.000:0.3469489740243384,112:0.8546950592633721)0.831:0.09687115115951203,(132:0.03864982984569831,(168:0.03899278598260409,169:0.0385063795994861,175:0.03705642091901182,177:0.03947670801377867)1.000:0.1549311579796855,176:0.04089414695689592)1.000:0.6026595524367439)0.968:0.1621392128101966)0.835:0.1150752144935105)0.890:0.1225212785805713,(93:0.04142776005951672,136:0.03686892128287306,137:0.04266799909457662,149:0.03943930911435713,150:0.04116196654940209)0.999:0.3101175355611894)0.720:0.1012623307674188,(((41:0.03433824801938148,108:0.03352245092248835,125:0.03564276987803058)1.000:0.2746559417756297,(104:0.0339871634947552,159:0.03586423160927937,161:0.03576731395385883)0.999:0.2152963215366713)0.998:0.2160867240572603,(42:0.04156361310176608,43:0.0399062137015021)1.000:0.3253175274577475)0.899:0.1099056707985587)0.994:0.571419906807844); END; BEGIN TREES; Title RAxML_Alta1; LINK Taxa = Taxa; TRANSLATE 1 Alternaria_anagallidis_CBS_101004_, 2 Alternaria_calendulae_CBS_101498_, 3 Alternaria_dauci_CBS_101592_, 4 Alternaria_cichorii_CBS_102_33_, 5 Alternaria_crassa_CBS_103_18_, 6 Alternaria_citrullicola_CBS_103_32, 7 Alternaria_scorzonerae_CBS_103_46_, 8 Alternaria_linariae_CBS_105_41, 9 Alternaria_alternariacida_CBS_105_51, 10 Alternaria_solani_CBS_106_21, 11 Alternaria_macrospora_CBS_106_29_, 12 Alternaria_dauci_CBS_106_48_, 13 Alternaria_allii_CBS_107_28_, 14 Alternaria_gypsophilae_CBS_107_41_, 15 Alternaria_anagallidis_CBS_107_44_, 16 Alternaria_zinniae_CBS_107_48_, 17 Alternaria_linariae_CBS_107_61, 18 Alternaria_linariae_CBS_108_53, 19 Alternaria_zinniae_CBS_108_61_, 20 Alternaria_allii_CBS_109_41_, 21 Alternaria_solani_nigri_CBS_109155_, 22 Alternaria_linariae_CBS_109156, 23 Alternaria_solani_CBS_109157, 24 Alternaria_grandis_CBS_109158_, 25 Alternaria_crassa_CBS_109160_, 26 Alternaria_linariae_CBS_109161_, 27 Alternaria_crassa_CBS_109162_, 28 Alternaria_nitrimali_CBS_109163_, 29 Alternaria_linariae_CBS_109164_, 30 Alternaria_crassa_CBS_110_38_, 31 Alternaria_deserticola_CBS_110799_, 32 Alternaria_dauci_CBS_111_38_, 33 Alternaria_solani_CBS_111_41_, 34 Alternaria_solani_CBS_111_44_, 35 Alternaria_passiflorae_CBS_113_38, 36 Alternaria_cirsinoxia_CBS_113261_, 37 Alternaria_solani_nigri_CBS_113403_, 38 Alternaria_sesami_CBS115264_, 39 Alternaria_cucumerina_CBS_116114_, 40 Alternaria_pipionipisi_CBS_116115_, 41 Alternaria_tillandsiae_CBS_116116_, 42 Alternaria_echinaceae_CBS_116117_, 43 Alternaria_echinaceae_CBS_116118_, 44 Alternaria_cassiae_CBS_116119_, 45 Alternaria_novae_guineensis_CBS_116120_, 46 Alternaria_venezuelensis_CBS_116121_, 47 Alternaria_ranunculi_CBS_116330_, 48 Alternaria_thunbergiae_CBS116331_, 49 Alternaria_solani_nigri_CBS_116332, 50 Alternaria_passiflorae_CBS_116333_, 51 Alternaria_solani_nigri_CBS_116334, 52 Alternaria_protenta_CBS_116437, 53 Alternaria_linariae_CBS_116438, 54 Alternaria_calendulae_CBS_116439_, 55 Alternaria_carthami_CBS_116440, 56 Alternaria_linariae_CBS_116441, 57 Alternaria_solani_CBS_116442, 58 Alternaria_azadirachtae_CBS_116444, 59 Alternaria_azadirachtae_CBS_116445, 60 Alternaria_centaureae_CBS_116446, 61 Alternaria_solani_nigri_CBS_116447, 62 Alternaria_crassa_CBS_116647, 63 Alternaria_crassa_CBS_116648, 64 Alternaria_porri_CBS_116649, 65 Alternaria_calendulae_CBS_116650, 66 Alternaria_protenta_CBS_116651, 67 Alternaria_paralinicola_CBS_116652, 68 Alternaria_grandis_CBS_116695, 69 Alternaria_protenta_CBS_116696, 70 Alternaria_protenta_CBS_116697, 71 Alternaria_porri_CBS_116698, 72 Alternaria_porri_CBS_116699, 73 Alternaria_allii_CBS_116701, 74 Alternaria_scorzonerae_CBS_116703, 75 Alternaria_linariae_CBS_116704, 76 Alternaria_zinniae_CBS_117_59, 77 Alternaria_carthami_CBS_117091, 78 Alternaria_carthamicola_CBS_117092, 79 Alternaria_bataticola_CBS_117095, 80 Alternaria_bataticola_CBS_117096, 81 Alternaria_dauci_CBS_117097, 82 Alternaria_dauci_CBS_117098, 83 Alternaria_dauci_CBS_117099, 84 Alternaria_dauci_CBS_117100, 85 Alternaria_solani_nigri_CBS117101, 86 Alternaria_passiflorae_CBS_117102, 87 Alternaria_passiflorae_CBS_117103, 88 Alternaria_dichondrae_CBS_117127, 89 Alternaria_anagallidis_CBS_117128, 90 Alternaria_anagallidis_CBS_117129, 91 Alternaria_blumeae_CBS_117215, 92 Alternaria_tropica_CBS_117216, 93 Alternaria_tagetica_CBS_117217, 94 Alternaria_cichorii_CBS_117218, 95 Alternaria_cyamopsidis_CBS_117219, 96 Alternaria_agerati_CBS_117221, 97 Alternaria_argyroxiphii_CBS_117222, 98 Alternaria_zinniae_CBS_117223, 99 Alternaria_cassiae_CBS_117224, 100 Alternaria_cucumerina_CBS_117225, 101 Alternaria_cucumerina_CBS_117226, 102 Alternaria_macrospora_CBS_117228, 103 Alternaria_ricini_CBS_117361, 104 Alternaria_steviae_CBS_117362, 105 Alternaria_blumeae_CBS_117364, 106 Alternaria_pipionipisi_CBS_117365, 107 Alternaria_rostellata_CBS_117366, 108 Alternaria_obtecta_CBS_117367, 109 Alternaria_cassiae_CBS_117369, 110 Alternaria_sidae_CBS_117730, 111 Alternaria_zinniae_CBS_118_44, 112 Alternaria_pseudorostrata_CBS_119411, 113 Alternaria_thunbergiae_CBS_120986, 114 Alternaria_protenta_CBS_121342, 115 Alternaria_montanica_CBS_121343, 116 Alternaria_allii_CBS_121345, 117 Alternaria_solani_nigri_CBS_121347, 118 Alternaria_crassa_CBS_122590, 119 Alternaria_thunbergiae_CBS_122597, 120 Alternaria_euphorbiicola_CBS_133874, 121 Alternaria_silybi_CBS_134092, 122 Alternaria_silybi_CBS_134093, 123 Alternaria_silybi_CBS_134094, 124 Alternaria_pipionipisi_CBS_134265, 125 Alternaria_obtecta_CBS_134278, 126 Alternaria_protenta_CBS_135189, 127 Alternaria_passiflorae_CBS_166_77, 128 Alternaria_euphorbiicola_CBS_198_86, 129 Alternaria_dichondrae_CBS_199_74, 130 Alternaria_dichondrae_CBS_200_74, 131 Alternaria_ricini_CBS_215_31_, 132 Alternaria_ipomoeae_CBS_219_79_, 133 Alternaria_calendulae_CBS_224_76, 134 Alternaria_allii_CBS_225_76, 135 Alternaria_sesami_CBS_240_73, 136 Alternaria_tagetica_CBS_297_79, 137 Alternaria_tagetica_CBS_298_79, 138 Alternaria_zinniae_CBS_299_79, 139 Alternaria_zinniae_CBS_300_79, 140 Alternaria_dauci_CBS_345_79, 141 Alternaria_dichondrae_CBS_346_79, 142 Alternaria_protenta_CBS_347_79, 143 Alternaria_ricini_CBS_353_86, 144 Alternaria_cyamopsidis_CBS_364_67, 145 Alternaria_sennae_CBS_477_81, 146 Alternaria_dauci_CBS_477_83, 147 Alternaria_cassiae_CBS_478_81, 148 Alternaria_scorzonerae_CBS_478_83, 149 Alternaria_tagetica_CBS_479_81, 150 Alternaria_tagetica_CBS_480_81, 151 Alternaria_limicola_CBS_483_90, 152 Alternaria_bataticola_CBS_531_63, 153 Alternaria_bataticola_CBS_532_63_, 154 Alternaria_acalyphicola_CBS_541_94, 155 Alternaria_agripestis_CBS_577_94, 156 Alternaria_aragakii_CBS_594_93, 157 Alternaria_passiflorae_CBS_629_93, 158 Alternaria_passiflorae_CBS_630_93_, 159 _Alternaria_steviae_CBS_631_88, 160 Alternaria_tropica_CBS_631_93, 161 Alternaria_steviae_CBS_632_88, 162 Alternaria_carthami_CBS_635_80, 163 Alternaria_multirostrata_CBS_712_68, 164 Alternaria_multirostrata_CBS_713_68, 165 Alternaria_jesenskae_CBS_133855, 166 Alternaria_linariae_CPC_21620, 167 Alternaria_bataticola_PPRI_10502, 168 Alternaria_neoipomoeae_PPRI_11845, 169 Alternaria_neoipomoeae_PPRI_11847, 170 Alternaria_argyroxiphii_PPRI_11848, 171 Alternaria_bataticola_PPRI_11930, 172 Alternaria_bataticola_PPRI_11931, 173 Alternaria_bataticola_PPRI_11934, 174 Alternaria_argyroxiphii_PPRI_11971, 175 Alternaria_neoipomoeae_PPRI_13903, 176 Alternaria_ipomoeae_PPRI_8988, 177 Alternaria_neoipomoeae_PPRI_8990, 178 Alternaria_conidiophora_CBS_137457, 179 Alternaria_catananches_CBS_137456, 180 Alternaria_novae_guineensis_PPRI_12171, 181 Alternaria_anodae_PPRI_12376; TREE RAxML_Alt_a_1 = ((((((((((((28:0.006494957937079658,(((27:1.31046647243463E-6,62:1.31046647243463E-6)7:1.31046647243463E-6,(25:1.31046647243463E-6,(((118:1.31046647243463E-6,63:1.31046647243463E-6)5:1.31046647243463E-6,30:1.31046647243463E-6)1:1.31046647243463E-6,5:1.31046647243463E-6)1:1.31046647243463E-6)1:1.31046647243463E-6)83:0.004304311567473097,((40:1.31046647243463E-6,124:1.31046647243463E-6)31:1.31046647243463E-6,106:1.31046647243463E-6)98:0.008661346957444431)12:1.31046647243463E-6)36:0.0021511389607489946,(6:0.0021622147653692562,(156:0.0021534725685365594,((11:1.31046647243463E-6,102:1.31046647243463E-6)66:0.00214890408705746,((95:1.31046647243463E-6,144:1.31046647243463E-6)63:0.002148904052894628,(31:0.006533502264353269,107:0.0023179896150352505)6:1.31046647243463E-6)1:1.31046647243463E-6)1:1.31046647243463E-6)0:1.31046647243463E-6)2:1.31046647243463E-6)3:1.31046647243463E-6,((119:1.31046647243463E-6,48:1.31046647243463E-6)31:1.31046647243463E-6,113:1.31046647243463E-6)94:0.006531535172390168)8:1.31046647243463E-6,((((((103:1.31046647243463E-6,143:1.31046647243463E-6)14:1.31046647243463E-6,(154:1.31046647243463E-6,131:1.31046647243463E-6)17:1.31046647243463E-6)65:0.002146810027770921,39:0.002145656002034455)8:1.31046647243463E-6,((100:1.31046647243463E-6,101:1.31046647243463E-6)15:1.31046647243463E-6,46:1.31046647243463E-6)16:1.31046647243463E-6)21:1.31046647243463E-6,181:0.010873945427597174)50:0.00214655958715928,((((((98:1.31046647243463E-6,76:1.31046647243463E-6)5:1.31046647243463E-6,(147:1.31046647243463E-6,44:1.31046647243463E-6)1:1.31046647243463E-6)0:1.31046647243463E-6,16:1.31046647243463E-6)0:1.31046647243463E-6,((111:1.31046647243463E-6,((138:1.31046647243463E-6,((59:1.31046647243463E-6,19:1.31046647243463E-6)6:1.31046647243463E-6,58:1.31046647243463E-6)1:1.31046647243463E-6)0:1.31046647243463E-6,99:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,139:1.31046647243463E-6)0:1.31046647243463E-6)6:1.31046647243463E-6,((109:0.0021387096373353606,145:1.31046647243463E-6)57:0.002152055411298305,110:0.008686535322287818)19:1.31046647243463E-6)10:1.31046647243463E-6,((105:1.31046647243463E-6,96:1.31046647243463E-6)25:1.31046647243463E-6,91:1.31046647243463E-6)62:0.002168212810988147)49:0.002156003497982623)43:1.31046647243463E-6)92:0.010058397382458607,(((72:1.31046647243463E-6,71:1.31046647243463E-6)72:1.31046647243463E-6,(((134:1.31046647243463E-6,(64:1.31046647243463E-6,20:1.31046647243463E-6)15:1.31046647243463E-6)2:1.31046647243463E-6,13:1.31046647243463E-6)3:1.31046647243463E-6,(116:1.31046647243463E-6,73:1.31046647243463E-6)10:1.31046647243463E-6)68:0.0021494678270209573)99:0.012254980873832954,112:0.03392429235491158)29:3.0332525271569604E-4)40:0.0024962728095041056,((176:1.31046647243463E-6,132:1.31046647243463E-6)89:1.31046647243463E-6,(((168:1.31046647243463E-6,169:1.31046647243463E-6)12:1.31046647243463E-6,175:1.31046647243463E-6)12:1.31046647243463E-6,177:1.31046647243463E-6)88:0.004369667961301414)99:0.02103127164931235)42:0.004633695669002525,(((133:1.31046647243463E-6,(54:1.31046647243463E-6,2:1.31046647243463E-6)33:1.31046647243463E-6)19:1.31046647243463E-6,65:1.31046647243463E-6)100:0.01788320415945151,(178:0.011090710134910664,((((((((126:1.31046647243463E-6,(((10:1.31046647243463E-6,69:1.31046647243463E-6)1:1.31046647243463E-6,70:1.31046647243463E-6)2:1.31046647243463E-6,52:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,(66:1.31046647243463E-6,33:1.31046647243463E-6)3:1.31046647243463E-6)0:1.31046647243463E-6,114:1.31046647243463E-6)0:1.31046647243463E-6,((24:1.31046647243463E-6,23:1.31046647243463E-6)5:1.31046647243463E-6,(68:1.31046647243463E-6,57:1.31046647243463E-6)8:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,(142:1.31046647243463E-6,34:1.31046647243463E-6)0:1.31046647243463E-6)85:0.004434126343442898,(((141:1.31046647243463E-6,(88:1.31046647243463E-6,129:1.31046647243463E-6)25:1.31046647243463E-6)56:1.31046647243463E-6,130:1.31046647243463E-6)99:0.008850700299165248,((4:1.31046647243463E-6,(148:1.31046647243463E-6,9:1.31046647243463E-6)14:1.31046647243463E-6)25:1.31046647243463E-6,179:1.31046647243463E-6)76:0.002076904811932784)50:0.002191891784363617)26:0.002149800404191765,((7:1.31046647243463E-6,67:1.31046647243463E-6)32:1.31046647243463E-6,74:1.31046647243463E-6)75:0.0021080384539640144)64:0.00445902337516243,(((127:1.31046647243463E-6,(((121:1.31046647243463E-6,((8:1.31046647243463E-6,(60:0.0021672329623186807,(155:0.00436581340370865,((((21:1.31046647243463E-6,(61:1.31046647243463E-6,51:1.31046647243463E-6)10:1.31046647243463E-6)2:1.31046647243463E-6,85:1.31046647243463E-6)1:1.31046647243463E-6,(49:1.31046647243463E-6,(117:1.31046647243463E-6,37:1.31046647243463E-6)3:1.31046647243463E-6)1:1.31046647243463E-6)46:0.002161201347236908,((86:1.31046647243463E-6,(56:1.31046647243463E-6,(87:1.31046647243463E-6,(36:1.31046647243463E-6,(162:1.31046647243463E-6,((26:1.31046647243463E-6,(22:1.31046647243463E-6,(18:1.31046647243463E-6,(29:1.31046647243463E-6,(35:1.31046647243463E-6,(158:1.31046647243463E-6,(166:1.31046647243463E-6,(50:1.31046647243463E-6,(17:1.31046647243463E-6,((53:1.31046647243463E-6,((((55:1.31046647243463E-6,(165:1.31046647243463E-6,94:1.31046647243463E-6)72:1.31046647243463E-6)3:1.31046647243463E-6,75:1.31046647243463E-6)0:1.31046647243463E-6,123:1.31046647243463E-6)0:1.31046647243463E-6,122:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,38:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,157:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,47:0.0021638904186114766)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,135:1.31046647243463E-6)0:1.31046647243463E-6)0:1.31046647243463E-6,78:1.31046647243463E-6)0:1.31046647243463E-6,77:1.31046647243463E-6)0:1.31046647243463E-6)2:1.31046647243463E-6,115:1.31046647243463E-6)6:1.31046647243463E-6,(164:1.31046647243463E-6,163:1.31046647243463E-6)64:0.002166844632554091)44:0.002329028002720639)20:1.31046647243463E-6)46:0.0049727116585536885)11:0.0014859085257715524)26:0.002518121864873913,((((92:1.31046647243463E-6,160:1.31046647243463E-6)93:0.0021644341341261666,((170:1.31046647243463E-6,174:1.31046647243463E-6)34:1.31046647243463E-6,97:1.31046647243463E-6)97:0.0066023398555470295)70:0.00416008738991868,(((15:0.002150976264275039,(89:1.31046647243463E-6,(90:1.31046647243463E-6,1:1.31046647243463E-6)20:1.31046647243463E-6)64:1.31046647243463E-6)98:0.008867905380567998,((((146:1.31046647243463E-6,(83:1.31046647243463E-6,((82:1.31046647243463E-6,(81:1.31046647243463E-6,32:1.31046647243463E-6)11:1.31046647243463E-6)1:1.31046647243463E-6,140:1.31046647243463E-6)0:1.31046647243463E-6)1:1.31046647243463E-6)1:1.31046647243463E-6,3:1.31046647243463E-6)2:1.31046647243463E-6,12:1.31046647243463E-6)47:1.31046647243463E-6,84:0.002136933807803962)98:0.008785479392317599)79:0.0023014642962297925,((171:1.31046647243463E-6,173:1.31046647243463E-6)86:1.31046647243463E-6,(((152:1.31046647243463E-6,167:1.31046647243463E-6)17:1.31046647243463E-6,80:1.31046647243463E-6)6:1.31046647243463E-6,((79:1.31046647243463E-6,153:1.31046647243463E-6)16:1.31046647243463E-6,172:1.31046647243463E-6)5:1.31046647243463E-6)96:0.006511947299294508)80:0.00418600007316142)40:0.002143765392540741)24:1.31046647243463E-6,(180:1.31046647243463E-6,45:1.31046647243463E-6)99:0.006648625771432264)71:0.00435445761431396)38:0.002360162225405622,((((136:1.31046647243463E-6,150:1.31046647243463E-6)13:1.31046647243463E-6,93:1.31046647243463E-6)7:1.31046647243463E-6,137:1.31046647243463E-6)7:1.31046647243463E-6,149:1.31046647243463E-6)99:0.010900531213422113)35:0.0021351319641837833,((42:1.31046647243463E-6,43:1.31046647243463E-6)100:0.011023149670412683,(((104:1.31046647243463E-6,159:1.31046647243463E-6)30:1.31046647243463E-6,161:1.31046647243463E-6)98:0.007376215805832276,((108:1.31046647243463E-6,41:1.31046647243463E-6)34:1.31046647243463E-6,125:1.31046647243463E-6)100:0.010262991645538394)87:0.006431501965504187)65:0.0022249893420606334)71:0.021829603724785138,(151:0.0020367450498002954,(128:1.31046647243463E-6,120:1.31046647243463E-6)91:0.0022388314470853147)98:0.029075703900462466):0.10556751262303075,14:0.10556751262303075); END; begin mrbayes; log start filename = Alta1.log; outgroup CBS107_41_Alternaria_gypsophilae_Gypsophila_elegans; lset nst = 6 rates = gamma; mcmc temp = 0.1 ngen = 5000000 samplefreq = 1000 stoprule = yes stopval = 0.01; plot; sump; sumt conformat = simple; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1407840323003; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1463301032647415964; endTell; getWindow; tell It; suppress; setResourcesState false false 242; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1920 972; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #1463301032647415964 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #1463301032647415964; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1678 905; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1678 905; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; setActive; endTell; showWindow; endTell; showTrees 1 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 2; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1678 905; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1463301032647415964 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1263.1407834899326.1416080638354118397; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1678 905; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;