#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=13; TAXLABELS 'Cystotheca lanestris Ex_Quercus_MUMH6845_MEX' 'Cystotheca lanestris Ex_Quercus_AB000933_USA' 'Cystotheca wrightii Ex_Quercus_KF735066_KOR' 'Cystotheca lanestris Ex_Quercus_AF073354_KOR' 'Cystotheca wrightii Ex_Quercus_AB000932_JPN' 'Cystotheca lanestris Ex_Quercus_AF011289_USA' 'Cystotheca lanestris Ex_Myrica_AF011288_USA' 'Cystotheca tjibodensis Ex_Castanopsis_JN807326_IDN' 'Cystotheca lanestris Ex_Castanea_KR048055_CHN' 'Cystotheca tjibodensis Ex_Castanopsis_JN807325_IDN' 'Setoidium castanopsidis Ex_Castanopsis_AB743782_IDN' 'Setoidium castanopsidis Ex_Castanopsis_AB743781_IDN' 'Sawadaea nankinensis Ex_Acer_AB353763' ; END; BEGIN CHARACTERS; TITLE Cystotheca_ITS_13_taxa; DIMENSIONS NCHAR=487; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Cystotheca lanestris Ex_Quercus_MUMH6845_MEX' CTGAGCGTGAGGCCACGCTGGGCGCCTGGCGCCGGGCGTGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCGCGTGCCCTCCTGGCACCTGCTGGGACGTGCCCGCCAGAGCCCCCTTAACGCGTGCTGTTTGTGTGGTCAGAGTGGTAGCAAAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCCTAGCTTGGTCTTGGGGCGCGCCCTGAGGGGCAGCCCTTAAATGCAGTGGCGGTGCCGTCCGGCTCTACGCGTAGTTATTTCTCTCGCGACAGGGTGGTGACGGGACCTGCCAGAATACCCATCTTAACAGG 'Cystotheca lanestris Ex_Quercus_AB000933_USA' ctgagcgtgaggccacgctgggcgcctggcgccgggcgtggctgaccctccacccgtgtctatcttctcatgttgctttggcgggccgggccgcgtgccctcctggcacctgctgggacgtgcccgccagagcccccttaacgcgtgctgtttgtgtggtcagagtggtagcaaaattagaataaaactttcaacaacggatctcttggctccggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaatttagtgaatcatcgaatctttgaacgcacattgcgccccccggtattccgaggggcatgcctgtccgagcgtcagtacaacccctcaagcctagcttggtcttggggcgcgccctgaggggcagcccttaaatgcagtggcggtgccgtccggctctacgcgtagttatttctctcgcgacagagtggtgacgggacctgccagaatacccatcttaacagg 'Cystotheca wrightii Ex_Quercus_KF735066_KOR' CTGAGCGTGAGGCCACGCTGGGCGCCTGGCGCCAGGCGTGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCCTGTGCCCTCCCGGCGCCTGCTGGGACGCGCCCGCCAGAGCCACCCTAACGCGTGCTGTTTGTGTGGTCAGAGTGGTAGCAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCCTGGCTTGGTCTTGGAGCGCGCCCCGCGGGGCGGCTCTTAAATGCAGTGGCGGTGCCGTCGGGCTCTACGCGTAGTTATTTCTCTCGCGACAGGGTGGTGACGGGACCTGCCAGAAGCCTCATCATACTAGG 'Cystotheca lanestris Ex_Quercus_AF073354_KOR' ctgagcgtgaagccacgctgggcgcctggcgccgggcgtggctgaccctccacccgtgtctatcttctcatgttgctttggcgggccgggccttgcgccctcctggcacctgctgggacgtgcccgccagagcccccttaacgcgtgctgtttgtgtggtcagagtggtagcagaattagaataaaactttcaacaacggatctcttggctccggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaatttagtgaatcatcgaatctttgaacgcacattgcgccccccggtattccgaggggcatgcctgtccgagcgtcagtacaacccctcaagcctagcttggtcttggggcgcgccctatggggcagcccttaaatgcagtggcggtgccgtccggctctacgcgtagttatttctctcgcgacagagtggtgacgggacctgccagaacacccattctaacagg 'Cystotheca wrightii Ex_Quercus_AB000932_JPN' ctgagcgtgaggccacgctgggcgcctggcgccaggcgtggctgaccctccacccgtgtctatcttctcatgttgctttggcgggccgggccctgtgccctcccggcgcctgctgggacgcgcccgccagagccaccctaacgcgtgctgtttgtgtggtcagagtggtagcagaattagaataaaactttcaacaacggatctcttggctccggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaatttagtgaatcatcgaatctttgaacgcacattgcgccccccggtattccgaggggcatgcctgtccgagcgtcagtacaacccctcaagcctggcttggtcttggagcgcgccccgcggggcggctcttaaatgcagtggcggtgccgtcgggctctacgcgtagttatttctctcgcgacagggtggtgacgggacctgccagaagcctcatcatactagg 'Cystotheca lanestris Ex_Quercus_AF011289_USA' ------------gcacgctgggcgcctggcgccgggcgtggctgaccctccacccgtgtctatcttctcatgttgctttggcgggccgggccgcgtgccctcctggcacctgctgggacgtgcccgccagagcccccttaacgcgtgctgtttgtgtggtcagagtggtagcaaaattagaataaaactttcaacaacggatctcttggctccggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaatttagtgaatcatcgaatctttgaacgcacattgcgccccccggtattccgaggggcatgcctgtccgagcgtcagtacaacccctcaagcctagcttggtcttggggcgcgccctgaggggcagcccttaaatgcagtggcggtgccgtccggctctacgcgtagttatttctctcgcgacagggtggtgacgggacctgccagaatacccatcttaacagg 'Cystotheca lanestris Ex_Myrica_AF011288_USA' ---------------cgctgggcgcctggcgccgggcgtggctgaccctccacccgtgtctatcttctcatgttgctttggcgggccgggccgcgtgccctcctggcacctgctgggacgtgcccgccagagcccccttaacgcgtgctgtttgtgtggtcagagtggtagcaaaattagaataaaactttcaacaacggatctcttggctccggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaatttagtgaatcatcgaatctttgaacgcacattgcgccccccggtattccgaggggcatgcctgtccgagcgtcagtacaacccctcaagcctagcttggtcttggggcgcgccctgaggggcagcccttaaatgcagtggcggtgccgtccggctctacgcgtagttatttctctcgcgacagggtggtgacgggacctgccagaatacccatcttaacagg 'Cystotheca tjibodensis Ex_Castanopsis_JN807326_IDN' ---GACGTGAGGCCACGCTGGGCGCCTGGCGCCTGGCGGGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCTCGTGCCCTCCCGGCGTCGGCTGGGACGCGCCCGCCAGAGCCCCCCTAACGCGTGCTGTTTGTGTGGTCAGAGTGGTAGCAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCGTAGCTTGGTCTTGGGGCGCGCCCCGCGGGGCGGCCCTTAAATGCAGTGGCGGTGCCGTTGGGCTCTACGCGTAGTTATTTCTCTCGCG------------------------------------------- 'Cystotheca lanestris Ex_Castanea_KR048055_CHN' CTGAGCGTGAAGCCACGCTGGGCGCCTGGCGCCGGGCGTGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCTTGCGCCCTCCTGGCACCTGCTGGGACGTGCCCGCCAGAGCCCCCTTAACGCGTGCTGTTTGTGTGGTCAGAGTGGTAGCAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCCTAGCTTGGTCTTGGGGCGCGCCCTATGGGGCAGCCCTTAAATGCAGTGGCGGTGCCGTCCGGCTCTACGCGTAGTTATTTCTCTCGCGACAGAGTGGTGACGGGACCTGCCAGAACACCCATTCTAACAGG 'Cystotheca tjibodensis Ex_Castanopsis_JN807325_IDN' -------------------------------------------------CCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCTCGTGCCCTCCCGGCGTCGGCTGGGACGCGCCCGCCAGAGCCCCCCTAACGCGTGCTGTTTGTGTGGTCAGAGTGGTAGCAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCGTAGCTTGGTCTTGGGGCGCGCCCCGCGGGGCGGCCCTTAAATGCAGTGGCGGTGCCGTTGGGCTCTACGCGTAGTTATTTCTCTCGCGACAGGGTGGTGACGGGACTTGCCAAAAGGCTCATCTCATTCGG 'Setoidium castanopsidis Ex_Castanopsis_AB743782_IDN' ----------------------CGCCTGGCGCCGGGCGTGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCTCGTGCCCTCCTGGCGCCTGCTGGGACGCGCCCGCCAGAGCCCCCCTAACGCGTGCTGTTTGTGTGGTCTGAGTGGTAATAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCCTAGCTTGGTCTTGGGGCGCGCCCCGCGGGGCAGCCCTTAAATGCAGTGGCGGTGCCGTCGGGCTCTACGCGTAGTTATCTCTCTCGCGACAGGGCGGCGACGGGACTTGCCAAGAACCCCATCTTTACAGG 'Setoidium castanopsidis Ex_Castanopsis_AB743781_IDN' ----------------------CGCCTGGCGCCGGGCGTGGCTGACCCTCCACCCGTGTCTATCTTCTCATGTTGCTTTGGCGGGCCGGGCCTCGTGCCCTCCTGGCGCCTGCTGGGACGCGCCCGCCAGAGCCCCCCTAACGCGTGCTGTTTGTGTGGTCTGAGTGGTAATAGAATTAGAATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCAGTACAACCCCTCAAGCCTAGCTTGGTCTTGGGGCGCGCCCCGCGGGGCAGCCCTTAAATGCAGTGGCGGTGCCGTCGGGCTCTACGCGTAGTTATCTCTCTCGCGACAGGGCGGCGACGGGACTTGCCAAGAACCCCATCTTTACAGG 'Sawadaea nankinensis Ex_Acer_AB353763' CTGAGCGTGAGGCCACGCAGGGCGC---AAGCCCCGCGCGGCCGACCCTCCACCCGTGCCGACTCATATCCGGTT-------------GCCCTGGCGGCCTGCCGGCCCCGGCTGGCA-GTGCCCGCGAGAGGCGCCCCAACTCGTGCTGTCAGTGATGTCTGAGTCGCAGTTAATAAAG--TAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCTCAAGCCTAGCTTGGTCTTGGGGCCCGCC-GGCCTGGCGGCCCTTAAACACAGTGGCGGCGCCGCCGCGCTCTACGCGTAGTAACTCTTCTCGCGACAGGGCGCAGGCGGGGCCAGCCGAAGCACCCCCTTCTCTCGG ; END; BEGIN TREES; Title Cystotheca_ITS_13_taxa; LINK Taxa = Taxa; TRANSLATE [0] 1 'Cystotheca lanestris Ex_Quercus_MUMH6845_MEX', [1] 2 'Cystotheca lanestris Ex_Quercus_AB000933_USA', [2] 3 'Cystotheca wrightii Ex_Quercus_KF735066_KOR', [3] 4 'Cystotheca lanestris Ex_Quercus_AF073354_KOR', [4] 5 'Cystotheca wrightii Ex_Quercus_AB000932_JPN', [5] 6 'Cystotheca lanestris Ex_Quercus_AF011289_USA', [6] 7 'Cystotheca lanestris Ex_Myrica_AF011288_USA', [7] 8 'Cystotheca tjibodensis Ex_Castanopsis_JN807326_IDN', [8] 9 'Cystotheca lanestris Ex_Castanea_KR048055_CHN', [9] 10 'Cystotheca tjibodensis Ex_Castanopsis_JN807325_IDN', [10] 11 'Setoidium castanopsidis Ex_Castanopsis_AB743782_IDN', [11] 12 'Setoidium castanopsidis Ex_Castanopsis_AB743781_IDN', [12] 13 'Sawadaea nankinensis Ex_Acer_AB353763'; TREE Fig._1 = (((((((1,6,7),2),(4,9)),(11,12)),(3,5)),(8,10)),13); END;