#NEXUS [written Thu Sep 28 18:19:59 SGT 2017 by Mesquite version 3.3 (build 854) at 178-212.priv23.nus.edu.sg/172.23.178.212] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=31; TAXLABELS 'Phyllactinia pyri-serotinae Ex_Pyrus_AB080521' 'Phyllactinia actinidiae-latifoliae Ex_Actinidia_MUMH5514' 'Phyllactinia moricola Ex_Morus_MUMH79' 'Phyllactinia ampulliformis Ex_Discaria_AB080571' 'Phyllactinia fraxinicola Ex_Fraxinus_AB080493' 'Phyllactinia fraxinicola Ex_Fraxinus_AB080585' 'Phyllactinia enkianthi Ex_Rhododendron_AB080517' 'Phyllactinia juglandis Ex_Juglans__AB080531' 'Phyllactinia actinidiae Ex_Actinidia_AB080489' 'Phyllactinia salmonii Ex_Paulownia_AB080486' 'Phyllactinia sapii Ex_Sapium_AB080487' 'Phyllactinia fraxini Ex_Wisteria_AB080544' 'Phyllactinia fraxini Ex_Fraxinus_AB080551' 'Phyllactinia leveilluloides Ex_Quercus_HAL2917F' 'Phyllactinia chubutiana Ex_Lycium_AB243690' 'Phyllactinia caricicola Ex_Carica_MUMH3722' 'Phyllactinia obclavata Ex_Tabebuia_MUMH3725' 'Phyllactinia durantae Ex_Duranta_MUMH3726' 'Leveillula cylindrospora Ex_Noaea_AB044352' 'Leveillula saxaouli Ex_Haloxylon_AB044382' 'Leveillula picridis Ex_Artemisia_AB044384' 'Leveillula taurica Ex_Impatiens_AB045003' 'Leveillula guilanensis Ex_Chondrilla_AB045156' 'Leveillula duriaei Ex_Salvia_AB044373' 'Phyllactinia adesmiae Ex_Adesmia_MUMH1938' 'Phyllactinia bougainvilleae Ex_Bougainvillea_KC556804' 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3351' 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH5750' 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3342' 'Pleochaeta polychaeta Ex_Celtis_MUMH3086' 'Pleochaeta shiraiana Ex_Celtis_MUMH1742' ; END; BEGIN CHARACTERS; TITLE Phyllactinia_lagerstroemiae_ITS_31_taxa; DIMENSIONS NCHAR=765; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Phyllactinia pyri-serotinae Ex_Pyrus_AB080521' CTGAGCG-TGAAGACTCTCGGG-CCCCC--C-CGCCATGGCGCAAGCCAG-TGCGGCGAGGGGGGCGAATCATGCCGGAGTCGACCC--TCCCACCCGTGTCGATGTTA-TCTCCTGTTGCTTTGGTGGGCCGG--GGGCCGCCT--AGCGGACCCCGCTGGC-----CCT------GCGC-----------------GGGC-TAGAG-CGTGCCTGCCAGA--GA-----------AATC-TTGACAA----------------CTCGTTTAATT------TGAGGAAGTCTGAGC-AAGCCCCCATGGGCGAA----CA---CACAATTTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAA---ACAA-CCCCTCAAGCCAG-TCT----GGCTTGGTCTTGGGG-TCCGCCC-GC-G--------------------------------GCTGCGC------------GGCGGCCCTTAAAGCCAGTGGCGGTACCGGTAG-TGCTCTCCGCGTAGT---CA--CG--ATCTCGCGGCAGGGTAGCA-CTGGA-TCCAGCCAG---AA--GACGATGACGCCG--CCTT-CGGTGCGGTGTC------TG--------TTTCAA---TGG 'Phyllactinia actinidiae-latifoliae Ex_Actinidia_MUMH5514' -------------------------------------CGGCGCAAGTCGG-TGTGA---GAGGGGGGACCATGCCGGGGGTCGACCC--TCCCACCCGTGTCGATTTTTTTCTCCTGTTGCTTTGGCAGGCCGG------GGCCC--AGCG--CCCCGCTGGC-----CGC--------------------------ATGGC-TGGAG-CGTGCCTGCCAGAGGGA-----------AATGTTAGTCAA----------------CTCGTGTAATT------TAATGCAGTCTGAGCAAA-------TGTGAAAA------------TAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGCTTCT----GGCTTGGTCTTGGGG-CTCGCCC-GCAA--------------------------------TCTGCGT------------GGCGTCCCTTAAACGCAGTGGCGGTACCAGCGGTTGCTCTCCGCGCAGT---CA--CGT-TTCTCGCGGCAGGGAGACA-CTGGA-ACCAGCCAA---AACCAAAAGACCCCGCGGACGTCTCGGCGTCACGGA-------------CTCTCTCTA---TGG 'Phyllactinia moricola Ex_Morus_MUMH79' CTGAGCG-TGAAGACTCTCG---GTCCCCCGCCCCATTGGTGCAAGCCAG-TGC-----GAGGGGGGAGCATGGCCGGAGTCGACCC--TCCCACCCGTGTCGATAAAA-ACGTCTGTTGCTTTGGTAGGCCGG--GGCCCGCCT--GGCGGATCCCGCTGG------CCT------TTG-----------------ATGGC-TGGAG-CGTGCCTGCCAGA--GA------------AAGTTGGACAA----------------CTCGTGTGA-T------TGATGAAGTCTGAGC-AA----CCAAGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAA---ACAA-CCCCTCAAGTCGC-TCT----GGCTTGGTCTTGGGG-CCCGCCC-GC-G--------------------------------ACAGCGT------------GGCGGCCCTTAAATCTAGTGGCGGTGCCGGTGG-TGCTCTCCGTGTAGT---CA--CG--TTCTCGCGACAGGGCAGCA-CTGGA-CCCAGCCAA---AA----GACAACCTGTG--CGTC----TGTCGCACG---------------CTATCTA---TGG 'Phyllactinia ampulliformis Ex_Discaria_AB080571' ----------------------------------------------------------------------------------GACC----TCCACCCGTGTCGATTGTA-TCTTCTGTTGCTTTGGTAGGCCGG--GGCCCGCCT--AGCGGATCCCGCTGG------CCT------CTGA-----------------TGGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAAC-TTGACAA----------------CTCGTGTGA-T------TGATGAAGTCTGAGCAAA----CCATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAAA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CGCGCCC-GC-G--------------------------------AGAGCGC------------GGCGGCCCTTAAATCGAGTGGCGGTACCGGTGG-TGCTCTCCGCGTAGT---CA--CGT-TTCTCGCGACAGGACGGCA-CTGGA-ACCAGCCAA---AA--------GACGACG----GA-CGCTGGTGCGTC------TGTCCTAC-TGATCTA---TGG 'Phyllactinia fraxinicola Ex_Fraxinus_AB080493' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCGCGGCGCAAGTCGAGGTT-----GAGGGGAACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA-TTTATTCTCCTGTTGCTTTGGCAGGCCGG----GGCGCCCTTGGCA--CTCCGCCGGC-----CCC------TTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAATGTTGTCAA----------------CTCGTGTGA-T------TGGTGAAGTCTGAGG-AA----TCATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCGGGCCGC-TCA----GGCTTGGTCTTGGGG-CTCGCCC-GC-C--------------------------------TTGGCGC------------GGCGGCCCTTAAATACAGTGGCGGTGCCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CCAGA-CCCAGCCAA---AA--------CCCGACG------CCGGCAAGGTGTC--------AACCCCCCCTTCTA----GG 'Phyllactinia fraxinicola Ex_Fraxinus_AB080585' CAGAGCG-TGAAGACCTC-----GGCCC---CTCCCGCGGCGCAAGTCGA-GGTG----GAGGGGAACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGATTTTATTCTCCTGTTGCTTTGGCAGGCCGG----GGCGCCTT-GGCG--CTCCGCCGGC-----CCC------GTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAATGTTAGCAA----------------CTCGTGTGA-T------TGGTGAAGTCTGAGG-AA----TCATGTGGGAA----A----------TTAGTTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAGGCCGC-GCA----GGCTTGGTCTTGGGG-CTCGCCC-GC-C--------------------------------TTGGCGC------------GGCGGCCCTTAAACACAGTGGCGGTGCCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CCAGA-CCCAGCCAA---AA--------CCCGACG------CCGGCAAGGTGTC---------AACCCCCTCTCTA----GG 'Phyllactinia enkianthi Ex_Rhododendron_AB080517' CAGAGCG-TGAAGACCCCCCTCGGGCCC---CTCCAGCGGCGCAAGTCGG-TGT-----GAGGGATACATG-CCTCGGGGTCGACCC--TCCCACCCGTGTCGATATTATTCTCCTGTTGCTTTGGCAGGCCGG-------------GGCA--ACCCGCTGG------CCC------TTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------ATGTATTTTCAATATGTTTTGGAACAA-CTCGTGTTA-T------TGGTGAAGTCTGAGCACA------ATGTGGGAA----A----------TAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-A--------------------------------TCTGCGC------------GGCGTCCCTTAAACCCAGTGGCGGAACCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGTGGCA-CTGGA-TCCAGCCAA---AA-----AGACCCACGG--CGTCTTTGCGCGACGTG------------TCTCTCTCAA---TGG 'Phyllactinia juglandis Ex_Juglans__AB080531' CAGAGCG-TGAAGACTCC---TCGGCCC---CTCCAGCGGCGCAAGTCGG-TGC-----GAGGGATACATG-CTGCGGGGTCGACCC--TCCCACCCGTGTCGATATTATTCTCCTGTTGCTTTGGCAGGCCGG-------------GGTA--ACCCGCTGG------CCC------TTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------ATGTATTTTCAATATGTTTTGGAACAA-CTCGTGTTA-T------TGGTGAAGTCTGAGCACA------ATGTGAGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-A--------------------------------GCTGCGC------------GGCGTCCCTTAAACCCAGTGGCGGAACCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CTGGA-TCCAGCCAA---AA-----AGACCCACGG--CGTC-TTGCGCGACGTG------------TCTCTCTCAA---TGG 'Phyllactinia actinidiae Ex_Actinidia_AB080489' CAGAGCG-TGAAGACCCCCCCTCGGGCC--CCTCCAGCGGCGCAAGTCGG-TGT-----GAGGGATACATG-CCTCGGGGTCGACCC--TCCCACCCGTGTCGATATTATTCTCCTGTTGCTTTGGCAGGCCGG-------------GGCA--ACCCGCTGG------CCC------TTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------ATGTATTTTCAAAGTGTTTTGGAACAA-CTCGTGTTA-T------TGGTGAAGTCTGAGCACA------ATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-A--------------------------------TCTGCGT------------GGCGTCCCTTAAACCCAGTGGCGGAACCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGTGGCA-CTGGA-TCCAGCCAA---AA-----AGACCCACGG--CGTCTTTGCGCGACGTG------------TCTCTCTCAA---TGG 'Phyllactinia salmonii Ex_Paulownia_AB080486' CAGAGCG-TGAAGACCCCCCTCGGGCCC---CTCCAGCGGCGCAAGTCGG-TGT-----GAGGGATACATGCCCTCGGGGTCGACCC--TCCCACCCGTGTCGATATTATTCTCCTGTTGCTTTGGCAGGCCGG-------------GGCA--ACCCGCTGG------CCC------TTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAGTATTTTCAATGTGTTTTGGAACAA-CTCGTGTTA-T------TGGTGAAGTCTGAGCACA------ATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-A--------------------------------TCTGCGC------------GGCGTCCCTTAAACCCAGTGGCGGAACCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGTGGCA-CTGGA-TCTAGCCAA---AA-----AGACCCACGG--CGTCTTTGCGCGACGTG------------ACTCTCTCAA---TGG 'Phyllactinia sapii Ex_Sapium_AB080487' CAGAGCG-TGAAGACTCC---TCGGCCC---CTGCAGCGGCGCAAGTCGA-TGT-----GAGGGATACATG-CCGCGGGGTCGACCC--TCCCACCCGTGTCGATATTATTCTCCTGTTGCTTTGGCAGGCCGG-------------GGCA--ACCCGCTGG------CCC------TTG-------------------GGC-TGGAG-CGAGCCTGCCAGA--GA-----------ATGTATT-TCAATATGTTTTGGAACAACCTCGTGTTA-T------TGGTGAAGTCTGAGCACA------ATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCGTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-A--------------------------------GCTGCGC------------GGCGTCCCTTAAACCCAGTGGCGGAACCGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CTGGA-TCCAGCCAA---AA-----AGACCCACGG--CGTC-TTGCGCGACGTG------------TCTCTCTCAA---TGG 'Phyllactinia fraxini Ex_Wisteria_AB080544' -----------------------------------------------------------------------------------ACCC--TCCCACCCGTGTCGA-TTTATTCTCCTGTTGCTTTGGCAGGCCGG----GGCGCCTT-GGCG--CTCCGCTGGC-----CCC------CTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAATGTTGTCAA----------------CTCGTGTGA-T------TGGTGAAGTCTGAGG-AA----TCATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAGGCCGC-TCA----GGCTTGGTCTTGGGG-CTCGCCC-GC-C--------------------------------TTGGCGC------------GGCGGCCCTTAAACACCGTGGCGGTGCTGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CTGGA-CCCAGCCAA---AA--------CCCGACG------CCGGCAAGGTGTC--------AACCCCCCTCTCTA----GG 'Phyllactinia fraxini Ex_Fraxinus_AB080551' CAGAGCG-TGAAGACTTC-----GGCCC----CTCCGCGGCGCAAGTCGAGGTT-----GAGGGGAACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA-TTTATTCTCCTGTTGCTTTGGCAGGCCGG----GGCGCCTT-GGCG--CTCCGCTGGC-----CCC------CTG-------------------GGC-TGGAG-CGTGCCTGCCAGA--GA-----------AAATGTTGTCAA----------------CTCGTGTGA-T------TGGTGAAGTCTGAGG-AA----TCATGTGGGAA----A----------TTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCAGGCCGC-TCA----GGCTTGGTCTTGGGG-CTCGCCC-GC-C--------------------------------TTGGCGC------------GGCGGCCCTTAAACACCGTGGCGGTGCTGGTGG-TGCTCTCCGCGTAGT---CA--CG--TTCTCGCGACAGGGCGGCA-CTGGA-CCCAGCCAA---AA--------CCCGACG------CCGGCAAGGTGTC--------AACCCCCCTCTCTA----GG 'Phyllactinia leveilluloides Ex_Quercus_HAL2917F' CAGAGCG-TGAAGGCCTC-----GGCCC---CTTGTCTGGCGTAAGCTAG-TATG----GGGGGTACCATG---CCGGGGCCAACCC--TCCCACCCGTGTCGATCTCA-TCTCCTGTTGCTTTGGCAGGCCGG-----CCGCCTCCGTCGGTCCCCCCTAT------CCC------GCGATTAGTCGAGGGAGAAGGGCCC-TGCAG-TGTGCCTGCCAGA--GG-----------AAGTCTTGTCAA----------------CTCGTGTAAAG------TGGTGAAGTCTGAGG-AA-------TGAAATAA----A-----CCGAATTAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCTCTCGAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-G--------------------------------TATGCGC------------GGCGTCTCCTAAACATAGTGGCGGTGCCGGGTGGTGCTCTCCGCGTAGT---CA--CG--ATCTCGCGGCAGGGCAACA-GCGGA-CCTAGCCAACAAAA-----TCGTCCGGCGGA-----CTCCGTCGCGAT---------------CTTTCTCTTATGG 'Phyllactinia chubutiana Ex_Lycium_AB243690' CAGAGCG-TGACGACCTCG----GGCCC--TCTCATCCGGTGCAAGCTGG-AGCTTGA-GGGGGGTTCCTG---CCGGGGTCGACCC--TCCCACCCGTGTCGATCTCA-TCTCCTGTTGCTTTGGCAGGCCGG----ACCGCCT--GTCGG-TCCCTCGGGC-----CTT------TTGTGTTGGGGAAGGGA----AGCC-TGAAG-CGTGCCTGCCAGA--GAAGTTGGAAACAACATCTTGACAAA---------------CTCGTGTGA-T------TGGTGAAGTCTGAGG-CA----TCTAATAAAGA----T----AATGAATGAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCCAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCTCTCGAGCCGA-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-G--------------------------------ATAGCGT------------GGCGTCCCTTAAACCCAGTGGCGGTGCTGATAG-TGTTCTCCGCGTAGT---CA--CA--GTCTCGCGGTAGGGCAGTA-CCAGG-CCCAGCCAAG--AATAAAAGGATCCGGCG---ACC-TTCCGCCGCGAC----TCTTTCTCTCTCTCTCTCTAATGG 'Phyllactinia caricicola Ex_Carica_MUMH3722' ----------------------------------------------------------------------------------GACCC--TCCCACCCGTGTCGA-CTTGTTGTCTCGTTGCTTTGGCAGGCCGGCCGCCCCATCCCGGGCGG-GCCCTCTGG------CCT------TTG-------------------GCT-GGGAG-CGTGTCTGCCGGA--GA-----------AAAT--TGTTAA----------------CTCGTGTAA-T------TAGTGGGGTTTGAAG-------GGAAGGAA------------CATGAATGCA-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCGAGCCGC-TCT----GGCTTGGTCTTGGGG-CTCGCCC-GC-G--------------------------------GTCGCGC------------GGCGTCCCTTAAACTTAGTGGCGGTGCTGGTAG-TGCTCTCCGCGTAGT---CA--CGT-ATCTCGCGATAGGGTGGTG-CCGGA-CCCAGCCAAGCAACCGAGGTGGTCCGATG--GG----AGCGTCGGGCC------CCCCTCGCTTTCTCTA---TGG 'Phyllactinia obclavata Ex_Tabebuia_MUMH3725' ----------------------------------------------------------------------------------GACCC--TCCCACCCGTGTCGACCTTT-TCACCTGTTGCTTTGGCAGATCGG-----CCGCCTC-GGCG--GTCCTCTGGCACCTGCTCCGCGGGTAGACCCCGGCGGGGTCGGGCTGGC-TAGAGCCGTGTCTGCCAGAGAAA-----------AGAACTTGTCAA----------------CTCGTGTAACC------ACATGTCGTCTGAAGAAG----CTTCACAGAAG----CAGCATATGAATGAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCTGGGGGCATGCCTGTTCGAGCGTCATA---ACAACCTCCTCAAGCCCCCTTTGGGGGGCTTGGTTTTGGGG-CTCGCCC-GCGC--------------------------------TCGGCGT------------GGCGGTCCTTAAACACAGTGGCGGTGCCGGGGA-TGCTTTCCGCGTAGT---CG--CATCTTCTCGCGCGAAAGTCGGATCCCGA-CCCAGCCAGGTAAAGCCGCGAGTCGACGG--CCCA-CTACGCCGTCAA----------CTCTGCACTCTA---TGG 'Phyllactinia durantae Ex_Duranta_MUMH3726' -----------------------------------------------------------------------------------ACCC--TCCCACCCGTGTCGA-TTTATTCTCCTGTTGCTTTGGCAGGCCGG-----CCGCCT--GCCG--GTCCTCTGGC-----CCC------TTG------------------TGGCGTAGAG-CGTGTCTGCCAGA--GA----------AAAATTTTGTCAA----------------CTCGTATGA-T------CGGTGAAGTCTGAGG-AATCAAACACATGAA-----------------TAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCAGA---ACAA-CCCCTCGAGCCAC-TTT----GGCTTGGTCTTGGGG-CTCGCCC-GC-G--------------------------------GTCGCGT------------GGCGTCCCCTAAAAGCAGTGGCGGTGCCGGTAG-TGCTTTCCGCGTAGT---CA--CGT-ATCTCGCGCGAGGGTGGTG-CCGGA-CCCAGCCAGCAGGAGTCACGACGTCATCG---------TCGGGGCTTCAATCTTTTTTTATTTTTTCTTA---TGG 'Leveillula cylindrospora Ex_Noaea_AB044352' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCGCAGCGCAAGCTGA-TGC-----GAGGGACACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA--CTCGTCTCCTGTTGCTTTGGCAGGCCGA-----CTGCCT--AGCA--GTCCTCTGG------CTC------TCG-------------------GGC-TGGAG-TGCGCCTGCCAGA--GA--------------CCTACTCAA----------------CTCGTGTTC-T------GGATGAAGTCTGAGC-AA----TCAAGTATACA----A-----ATGAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCTTCGAGCCGA-CTA----GGCTTGGTCTTGGGG-CTCGCCC-GCGT--------------------------------TTGGCGC------------GGCGGCTCTCAAACGCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CAT-TTCTCGCGCGAGGGCAGAATCCGGA-CCCAGCCAGC--AACCACAACGTCCGCAG--CGCT-CTGCGCGGCGACGTTGTACGTTTTTTTCCTCCTC---CGG 'Leveillula saxaouli Ex_Haloxylon_AB044382' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCACAGCGCAAGCTGG-CGC-----AAGGGACACATG---CCGGGGTCAACCC--TCCCACCCGTGTCAA--CTCGTCTCCTGTTGCTTTGGCAGGCCGA-----CTGCCT--AGCG--GTCCTCTGG------CTC------TCG-------------------GGC-TGGAG-TGCGCCTGCCAGA--GA---------------CTACTCAA----------------CTCGTGTTT-T------GGATGAAGTCTGAGC-AA----TCAAGTATAAA----A-----ATGAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCTTCGAGCCGA-CTA----GGCTTGGTCTTGGGG-CTCGCCC-GCGT--------------------------------CTGGCGC------------GGCGGCTCTCAAACGCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CAT-TTCTCGCGCGAGAGCAGAATCCAGG-CCCAGCCAGC--AACCACAAAGTCCGCGG--CGCT-CTGCGCGGCGAC---------TTTGTACTTCTTC---TGG 'Leveillula picridis Ex_Artemisia_AB044384' CAGAGCG-TGAAGACCTC-----GGCCC--CATCCACCAGCGCAAGCGGG-TGC-----GAGGGACACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGACTCCG-TCTCTTGTTGCTTTGGCAGGCCGA-----CCGCCC--AGCG--GTCCTCTGG------CTC------CCG-------------------GGC-TGGAG-CGCGCCTGCCAGA--GA---------------ATATTCAA----------------CTCGTGTTT-T------GGGTGAAGTCTGAGC-AA----TCAAGTAATAC------------GAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAACCCCCTCGAGCCGA-CTA----GGCTTGGTCTTGGGG-CCCGCCC-GC-G--------------------------------TTGGCGC------------GGCGGCCCTTAAACCCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CGT-TTCTCGCGCGAGGGCACGATCTGGA-CCCAGCCAGC--AACC---AAGTCCGCGG--CGCT-GTGCGCTGCGAC---------------TTCTCTC---TGG 'Leveillula taurica Ex_Impatiens_AB045003' CAGAGCG-TGAAGACCGC-----GGCCC----CTCCGCAGCGCAAGCTGA-TGC-----GAGGGACACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA--CTCGTCTCCTGTTGCTTTGGCAGGCCGA-----CTGCCT--AGCG--GTCCTCTGG------CTC------TCG-------------------GGC-TGGAG-TGCGCCTGCCAGA--GA---------------CTATTTAA----------------CTCGTGTTT-T------GGATGAAGTCTGAGG-AA----TCAAGTGAACA----AA---AATGAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCGTCGAGCCGA-CTA----GGCTTGGTCTTGGGG-CTCGCCC-GCAT--------------------------------TTAGCGC------------GGCGGCTCTTAAACACAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CAT-TTCTCGCGCGAGGGCAGAATCCGGA-CCCAGCCAGCA-AACCACAGTGTCCGCGG--CGTT-CTGCGCAGCGAC---------TCTGTACTTCTTC---TGG 'Leveillula guilanensis Ex_Chondrilla_AB045156' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCGCAGCGCAAGCTGG-TGC-----GAGGGACACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA--CTCGTCTCCTGTTGCTTTGGCAGGCCGA-----CCGCCT--GGCG--GTCCTCTGG------CTC------TTG-------------------GGC-TGGAG-TGCGCCTGCCAGA--GA---------------CTATCCAA----------------CTCGTGTTC-T------GGATGAAGTCTGAGC-AA----TCAAGTAAAAA------ATTAAAGAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCGTCGAGCCGC-CTT----GGCTTGGTCTTGGGG-TCCGCCC-GC-G--------------------------------TTGGCGC------------GGCGGCCCTTAAATGCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CAT-TTCTCGCGCGAGGGCAGGATCCGGA-CCCAGCCAGC--AATC---TAGTTCGCGG--CGCT-CTGCGCTGCGAC---------------TTCTCTC---TGG 'Leveillula duriaei Ex_Salvia_AB044373' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCACAGCGCAAGCTGG-TGC-----GAGGGACACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGA--CTTGTCTCCTGTTGCTTTGGCAGGCCGA-----CTGCCT--AGCG--GTCCTCTGG------CTC------TCG-------------------GGC-TGGAG-TGCGCCTGCCAGA--GA---------------CTATTCAA----------------CTCGTGTTC-T------GGATGAAGTCTGAGC-AA----TAAAGAAAAAA----AAAATAATGAATAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTACTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCGTCGAGCCGA-CTA----GGCTTGGTCTTGGGG-CTCGCCC-GCAT--------------------------------TTGGCGC------------GGCGGCTCTTAAACGCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--CAT-TTCTCGCGCGAGGGCAGAATCCGGA-CCCAGCCAGC--AACCACAAAGTCCGCAG--CGCT-CTGCGCGGCGAC--------TTTTGTACTTCTTC---TGG 'Phyllactinia adesmiae Ex_Adesmia_MUMH1938' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCGCGGCGCAAGCTGA-TGC-----GAGGGATACATG--TCCGGGGTCGACCC--TCCCACCCGTGTCGA--CTCTTTTGCTGTTGCTTTGGCAGGCCGG-----CCGCCTCGCGCG--GTCCTCTGGC-----CCC------TCG-------------------GGC-TGGAG-CGCGCCTGCCAGA--GA-----------ATATTTTGTCAA----------------CTCGTGTTTAT------GAATGAAGTCTGAGT-AATCAAACATATTAGAA----A----------TAAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAACGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCCTCGAGCCGC-ATA----GGCTTGGTCTTGGGG-CTCGCCC-GC-G--------------------------------TCAGCGT------------GGCGGCCCTTAAATGCAGTGGCGGTGCCGGTGG-TGCTTTCCGCGTAGT---CA--TAT-TTCTCGCGCGAGAGCAGGATCCGGA-CCCAGCCAGC--AA---GCAAGTCCGCGG--CGGT-CTGCGTCGCGAC---------------TTCTCTC---AGG 'Phyllactinia bougainvilleae Ex_Bougainvillea_KC556804' CAGAGCG-TGAAGACCTC-----GGCCC----CTCCACAGCGCAAGCTGGTTGC-----GAGGGGGACATG---CCGGGGTCGACCC--TCCCACCCGTGTCGACCTATTTTTCCTGTTGCTTTGGCAGACCGG-----CCGCCG--CGCG--GTCCTCTGGCGTCCTCTG------TTG-----------------GGGGT-TGGAG-AGCGTCTGCCAGA--GA-----------AATACTTGTTAA----------------CTCGTGTGATT------AAATGCAGTCTGAGG-AA---------TGAAAA----T-----ACGAATACG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTGGGTATTCCTAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCTTCAAGCCGCATTT----GGCTTGGTCTTGGGG-CTCGTCC-GCAGGAAGCAACACAAAATCCTCTTTTTTGGGTTCTTCAGCGT------------GGCGGCTCTTAAATGCAGTGGCGGTGCTGGTGA-TGCTTTCCGCGTAGT---CA--CAT-CTTCCGCGCGAAGGCCAGATCCGGCTTCCAGCCAAGCTAAGCAAA------------CGGTTCTGCATCACGCA----GAGCTCGTTCACTCTCAA---TGG 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3351' CAGAGCGTTGAAGGCCCT-----GGCCCCGCATCCTCGGCCGCAAGTCGGGGGT-----GGGGGATCCACG---CCAGGGTCGACCC--TCCCACCCGTGTCGA-TTTAATTAACTGTTGCTTTGGCAGGCCCG--TGCCCCTCT--GGGG--ACGCTCTCG------CGC------TCAC------------------TGC-TGGAGTTGTGCCTGCCAGA--GA------------ACCATTGTCCA----------------CTCGTGTTG-T------CAGTGAAGTCTGAGGGAA----AGAAGAAATGA----A-----------TAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATT---ACAA-CCTCTCAAGCCTGTGTT----GGTTTGGTCTTGGGGACTCGCCCTGCCT--------------------------------TTGGCTT------------GGCGTCCCTTAAAAGCAGTGGCGGTGCCCGTGG-TGCTCTGCGCGTAGT---CA--TG--CTCTCGCGACAGGG--------GGA-GCCAGCCAAG--AACAAGTGTGGGTGGAG--ACGGTCTCCGTCGCCGC--------CTCCAATGTATCTA---AGG 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH5750' CAGAGCGTTGAAGGCCCT-----GGCCCCGCATCCTCGGCCGCAAGTCGGGGGT-----GGGGGATCCACG---CCAGGGTCGACCC--TCCCACCCGTGTCGA-TTTAATTAACTGTTGCTTTGGCAGGCCCG--TGCCCCTCT--GGGG--ACGCTCTCG------CGC------TCAC------------------TGC-TGGAGTTGTGCCTGCCAGA--GA------------ACCATTGTCCA----------------CTCGTGTTG-T------CAGTGAAGTCTGAGGGAA----AGAAGAAATGA----A-----------TAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATT---ACAA-CCTCTCAAGCCTGTGTT----GGTTTGGTCTTGGGGACTCGCCCTGCCT--------------------------------TTGGCTT------------GGCGTCCCTTAAAAGCAGTGGCGGTGCCCGTGG-TGCTCTGCGCGTAGT---CA--TG--CTCTCGCGACAGGG--------GGA-GCCAGCCAAG--AACAAGTGTGGGTGGAG--ACGGTCTCCGTCGCCGC--------CTCCAATGTATCTA---AGG 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3342' CCGAGCG-TGAAGGCCCT-----GGCCCCGCATCCTCGACCGCCAGTCGGGGGT-----GAGGGATCCACG---CCAGGGACGACCC--TCCCACCCGTGTCGA-TTTATGAATCTGTTGCTTTGGCAGGCCAG--TGCCCATCT--GGGT--ACGCTCCAG------CGC------GTG-------------------CGC-TGGAGGGGTGCCTGCCAGA--GA------------CCTATTGTCCA----------------CTCGTGTTG-T------CAGTGAAGTCTGAGGAAG------AAGAAATGA---------------ATAG-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATT---ACAA-CCTCTCAAGCCAGTCTT----GGTTTGGTCTTGGGGACTCGTCTCGCCT--------------------------------CTGGCCG------------GGCGTCCCTTAAAAGCAGTGGCGGTGCCCGTGG-TGCTCTGCGCGTAGT---CA--TG--CTCTCGCGACAGGGTCACT-GGGGA-GCCAGCCAAG--AA---------GCAGTGGGTGGTGCCGCTCTGCGTCGCCTACCCCAACTGTGTGTCGA---TGG 'Pleochaeta polychaeta Ex_Celtis_MUMH3086' -TGAGCG-TGAG--------------------ACTTATGCCTTGAATTGGGCAT-----------------------GAGTTGACCCCTCCCCACCCGTGCTGA-TTTATCAAACTGTTGCTTTGGCGGGCCTG--GACAATTTT--------GTTTTCCATCTTGTCCTTCCGGCTTTA------------------CGGC-TGAGA-CGTGTCCGCCAGA--GA---------CGAAAC----CCAA----------------CTCTTATGT-A------TAGTGTTGTCTTAGGCAAAGAAATTTGCGAAAC----AAAAAAAAATGAAAC-TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAAACACAA-CCTTTCAAGCCTTGCTTTTGGGCTTCGGTATTGGGG-CGCGCCC-------------------------------------TTGGCTTTTAATGCTTATAGGCGTCCCTTAAAGAGAGTGGCGGTGCCACGGT-TGCTCTACGCGTAGT---AAACAATGTTCTCGCGACAGGGTACCGGCGGGACGTGAGCCAG---AA-----------GGCG--GGTT-TTTCGCTCCCTT---------CACACTTTTTCATCATAGG 'Pleochaeta shiraiana Ex_Celtis_MUMH1742' CTGAGCGTGTGAGATTCT---------------------------------------------GCCACATG---GCGGAGTTGAACTACCTCCACCCGTGCCGATTTTATCTATCTGTTGCTTTGGTGGACCAG----GTCACCT--TGTG---CCCTGCGG------CTT------TTT-----------------TCGGC-TGTAG-TGCGTCCGCCAGA--GA---------CAAAGCCCCCCCAA----------------CTCGTGATTTTATGTAACAGTGTGGTCTAAGGAGA---------AGAAAACTTGAATTTTATAAATATACTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATA---ACAA-CCCATCAAGCCAC-CAT----GGTTTGGTCTTGGGG-CTCGCCG-------------------------------------ATTTTCT------------GGCGTCCCTTAAATAGAGTGGCAGTGCCGCGGG--GCTCTACGCGTAGTAAGCA--TTTTCTCTCGCGACAGAACACCGTTTGTGGACTGGCCAG---AA--------------------------GTTACATC---------------TTCTCATCACAGT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 765; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 765; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 765; END; BEGIN TREES; Title Phyllactinia_lagerstroemiae_ITS_31_taxa; ID 015ec7ff6a7521; LINK Taxa = Taxa; TRANSLATE [0] 1 'Phyllactinia pyri-serotinae Ex_Pyrus_AB080521', [1] 2 'Phyllactinia actinidiae-latifoliae Ex_Actinidia_MUMH5514', [2] 3 'Phyllactinia moricola Ex_Morus_MUMH79', [3] 4 'Phyllactinia ampulliformis Ex_Discaria_AB080571', [4] 5 'Phyllactinia fraxinicola Ex_Fraxinus_AB080493', [5] 6 'Phyllactinia fraxinicola Ex_Fraxinus_AB080585', [6] 7 'Phyllactinia enkianthi Ex_Rhododendron_AB080517', [7] 8 'Phyllactinia juglandis Ex_Juglans__AB080531', [8] 9 'Phyllactinia actinidiae Ex_Actinidia_AB080489', [9] 10 'Phyllactinia salmonii Ex_Paulownia_AB080486', [10] 11 'Phyllactinia sapii Ex_Sapium_AB080487', [11] 12 'Phyllactinia fraxini Ex_Wisteria_AB080544', [12] 13 'Phyllactinia fraxini Ex_Fraxinus_AB080551', [13] 14 'Phyllactinia leveilluloides Ex_Quercus_HAL2917F', [14] 15 'Phyllactinia chubutiana Ex_Lycium_AB243690', [15] 16 'Phyllactinia caricicola Ex_Carica_MUMH3722', [16] 17 'Phyllactinia obclavata Ex_Tabebuia_MUMH3725', [17] 18 'Phyllactinia durantae Ex_Duranta_MUMH3726', [18] 19 'Leveillula cylindrospora Ex_Noaea_AB044352', [19] 20 'Leveillula saxaouli Ex_Haloxylon_AB044382', [20] 21 'Leveillula picridis Ex_Artemisia_AB044384', [21] 22 'Leveillula taurica Ex_Impatiens_AB045003', [22] 23 'Leveillula guilanensis Ex_Chondrilla_AB045156', [23] 24 'Leveillula duriaei Ex_Salvia_AB044373', [24] 25 'Phyllactinia adesmiae Ex_Adesmia_MUMH1938', [25] 26 'Phyllactinia bougainvilleae Ex_Bougainvillea_KC556804', [26] 27 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3351', [27] 28 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH5750', [28] 29 'Phyllactinia lagerstroemiae Ex_Lagerstroemia_MUMH3342', [29] 30 'Pleochaeta polychaeta Ex_Celtis_MUMH3086', [30] 31 'Pleochaeta shiraiana Ex_Celtis_MUMH1742'; TREE 'PAUP_12' = ((30:0.439811,31:0.360191):0.095542,((29:0.112046,(27:0.0,28:0.0):0.06609):0.204791,(16:0.207093,((18:0.151593,((17:0.24768,26:0.132787):0.04846,(25:0.051465,(21:0.062408,(23:0.029768,((19:0.026171,20:0.022116):0.01187,(22:0.032847,24:0.011761):0.0):0.033477):0.00424):0.057733):0.041266):0.061918):0.045956,((14:0.177083,15:0.140229):0.067887,((6:0.01602,(5:0.016408,(12:0.0,13:0.0):0.016337):0.005323):0.077479,((2:0.100464,(3:0.085581,(1:0.169723,4:0.058149):0.005833):0.100046):0.023653,(9:0.005393,((7:0.00265,10:0.00874):0.005317,(8:0.009172,11:0.00943):0.009803):0.004817):0.080177):0.02196):0.045838):0.009559):0.01807):0.101711):0.095542)[% ] [% ] [% setBetweenBits = selected ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1506593999580; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2566773025988847432; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3990457386729604151; mqVersion 330; checksumv 0 3 1272121143 null getNumChars 765 numChars 765 getNumTaxa 31 numTaxa 31 short true bits 15 states 15 sumSquaresStatesOnly 359201.0 sumSquares 359201.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 180; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1121 702; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2566773025988847432 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 2; setTreeBlockID 015ec7ff6a7521; toggleUseWeights off; endTell; setAssignedID 2822.1506593970131.5714412462415635218; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 941 630; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3990457386729604151 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 941 630; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;