#NEXUS [written Fri Jan 03 15:21:48 EST 2014 by Mesquite version 2.74 (build 550) at ag-plp-11ba0tj.ag.cornell.edu/132.236.163.8] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=26; TAXLABELS Chrysomyxa_weirii_GUO49472 Melampsora_epitea_Mel_A Melampsora_epitea_Mel_H Melampsora_epitea_Mel_J Melampsora_epitea_Mel_R Melampsora_epitea_Mel_S 'Melampsora abietis-canadensis FJ666513' Melampsora_aecidioides_FJ666520 Melampsora_epitea_AF522170 Melampsora_epitea_DQ354564 Melampsora_epitea_HQ317514 Melampsora_euphorbiae_DQ437504 'Melampsora euphorbiae-gerardianae EF192199' 'Melampsora larici-populina JQ042250' Melampsora_populnea_f._sp._laricis_FJ666509 Melampsora_populnea_f._sp._pinitorqua_FJ666523 Melampsora_spp._EF192193 Melampsora_spp._EF192194 Melampsora_spp._EF192197 Melampsora_spp._EF192202 Melampsora_spp._EF192203 Melampsora_spp._EF192204 Melampsora_spp._EF192205 Melampsora_spp._EF192206 Melampsora_spp._EF192198 Melampsora_spp._GU058014 ; END; BEGIN CHARACTERS; TITLE 'Final LSU Alignment_Fig5'; DIMENSIONS NCHAR=744; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Chrysomyxa_weirii_GUO49472 -----------------------------CTGTAGATGATATGGACTACC Melampsora_epitea_Mel_A GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_epitea_Mel_H GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_epitea_Mel_J GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_epitea_Mel_R GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_epitea_Mel_S GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC 'Melampsora abietis-canadensis FJ666513' GAAAAGCAGCATCATTGAAGGTGAAAATCCTGT-AATGATATGGACTACC Melampsora_aecidioides_FJ666520 GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_epitea_AF522170 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_epitea_DQ354564 GAAAAGCAGCATCRTTGAAGGTGAAAATCCTGTWRATGATATGGACTACC Melampsora_epitea_HQ317514 GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_euphorbiae_DQ437504 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC 'Melampsora euphorbiae-gerardianae EF192199' GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC 'Melampsora larici-populina JQ042250' GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_populnea_f._sp._laricis_FJ666509 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAAATGATATGGACTACC Melampsora_populnea_f._sp._pinitorqua_FJ666523 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAAATGATATGGACTACC Melampsora_spp._EF192193 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_spp._EF192194 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_spp._EF192197 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_spp._EF192202 GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_spp._EF192203 GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_spp._EF192204 GAAAAGCAGCATCGTTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_spp._EF192205 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_spp._EF192206 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTTAATGATATGGACTACC Melampsora_spp._EF192198 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Melampsora_spp._GU058014 GAAAAGCAGCATCATTGAAGGTGAAAATCCTGTAGATGATATGGACTACC Chrysomyxa_weirii_GUO49472 AGTGCATGTGTGATACAGTCTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_Mel_A AGTATATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_Mel_H AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_Mel_J AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_Mel_R AGTGCATTTGTGATGCGATTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_Mel_S AGTGCATTTGTGATGCGATTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC 'Melampsora abietis-canadensis FJ666513' AGTGCATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_aecidioides_FJ666520 AGTACTCTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_AF522170 AGTATATTTGTGATACGG?TTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_DQ354564 AGTRYATTTGYGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_epitea_HQ317514 AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_euphorbiae_DQ437504 AGGACATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC 'Melampsora euphorbiae-gerardianae EF192199' AGGACATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC 'Melampsora larici-populina JQ042250' AGTGCATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_populnea_f._sp._laricis_FJ666509 AGTGCATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_populnea_f._sp._pinitorqua_FJ666523 AGTGCATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192193 AGTATATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192194 AGTATATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192197 AGTATATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192202 AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192203 AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192204 AGTGCATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192205 AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192206 AGTGCATTTGCGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._EF192198 AGTACTTTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Melampsora_spp._GU058014 AGTATATTTGTGATACGGTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGC Chrysomyxa_weirii_GUO49472 TCAAAGCGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_Mel_A TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_Mel_H TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_Mel_J TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_Mel_R TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_Mel_S TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG 'Melampsora abietis-canadensis FJ666513' TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_aecidioides_FJ666520 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGARACCG Melampsora_epitea_AF522170 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_DQ354564 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_epitea_HQ317514 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_euphorbiae_DQ437504 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG 'Melampsora euphorbiae-gerardianae EF192199' TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATTAGTGAGAGACCG 'Melampsora larici-populina JQ042250' TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_populnea_f._sp._laricis_FJ666509 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_populnea_f._sp._pinitorqua_FJ666523 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192193 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192194 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192197 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192202 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192203 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192204 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192205 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192206 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._EF192198 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Melampsora_spp._GU058014 TCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAATATAAGTGAGAGACCG Chrysomyxa_weirii_GUO49472 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_Mel_A ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_Mel_H ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_Mel_J ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_Mel_R ATAGCATACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_Mel_S ATAGCATACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA 'Melampsora abietis-canadensis FJ666513' ATAGCATACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_aecidioides_FJ666520 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_AF522170 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_DQ354564 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_epitea_HQ317514 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_euphorbiae_DQ437504 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA 'Melampsora euphorbiae-gerardianae EF192199' ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA 'Melampsora larici-populina JQ042250' ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_populnea_f._sp._laricis_FJ666509 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_populnea_f._sp._pinitorqua_FJ666523 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192193 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192194 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192197 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192202 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192203 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192204 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192205 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192206 ATAGYAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._EF192198 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Melampsora_spp._GU058014 ATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAATAGA Chrysomyxa_weirii_GUO49472 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTAAAGTTAGTTTTG Melampsora_epitea_Mel_A GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_epitea_Mel_H GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_epitea_Mel_J GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_epitea_Mel_R GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_epitea_Mel_S GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG 'Melampsora abietis-canadensis FJ666513' GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_aecidioides_FJ666520 GTTAACAGTACGTGAAATTGCTGAAAGGTAAACGTTTGAAGTTAGTTTTG Melampsora_epitea_AF522170 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_epitea_DQ354564 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTWTTG Melampsora_epitea_HQ317514 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_euphorbiae_DQ437504 GTTAAAAGTACGTGAAATTGCTGAAAGGGAAACGTTTAAAGTTAGTTTTG 'Melampsora euphorbiae-gerardianae EF192199' GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG 'Melampsora larici-populina JQ042250' GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_populnea_f._sp._laricis_FJ666509 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_populnea_f._sp._pinitorqua_FJ666523 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192193 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_spp._EF192194 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_spp._EF192197 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Melampsora_spp._EF192202 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192203 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192204 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192205 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192206 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTATTG Melampsora_spp._EF192198 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTRAAGTTAGTTTTG Melampsora_spp._GU058014 GTTAACAGTACGTGAAATTGCTGAAAGGGAAACGTTTGAAGTTAGTTTTG Chrysomyxa_weirii_GUO49472 TTGTCGTTAGTTCAGCTTCGCAAGGAGTGTATTCTAATGATCATCAAGCC Melampsora_epitea_Mel_A TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_Mel_H TATTTGTTGGATCAGCTTCGCAAGAGGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_Mel_J TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_Mel_R TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_Mel_S TATTCGTTRGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC 'Melampsora abietis-canadensis FJ666513' TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCCGATGATAAGCAAGTC Melampsora_aecidioides_FJ666520 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_AF522170 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_DQ354564 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_epitea_HQ317514 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_euphorbiae_DQ437504 TATTCGTTAGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC 'Melampsora euphorbiae-gerardianae EF192199' TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC 'Melampsora larici-populina JQ042250' TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_populnea_f._sp._laricis_FJ666509 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCCGATGATAAGCAAGTC Melampsora_populnea_f._sp._pinitorqua_FJ666523 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCCGATGATAAGCAAGTC Melampsora_spp._EF192193 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192194 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192197 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192202 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192203 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192204 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192205 TATTTGTTGGATCAGCTTCGCAAGAGGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192206 TATTYGTTGGATCAGCTTCGCAAGRRGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._EF192198 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Melampsora_spp._GU058014 TATTCGTTGGATCAGCTTCGCAAGGAGTGTATTCTGATGATAAGCAAGTC Chrysomyxa_weirii_GUO49472 AGCATCAATTT-TGGGTATGGGATAAGGGTTTTGAGAACGTAGCAAACA- Melampsora_epitea_Mel_A AACATCAGTCTATGAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_epitea_Mel_H AACATCAATCTATGAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_epitea_Mel_J AACATCAATCTATGAGTGTTGGATAAGGGTTTCGAGAATGTAGCAATTT- Melampsora_epitea_Mel_R AACATCAATCTTTGAGTGTTGGATAAGGGTTTTGAGGACGTAGCAATTT- Melampsora_epitea_Mel_S AACATCAATCTTTGAGTGTTGGATAAGGGTTTTGAGGATGTAGCAATTT- 'Melampsora abietis-canadensis FJ666513' AACATCAATCGATGAGTGTTGGATAAGGGTTTCGAGAATGTAGCAATTT- Melampsora_aecidioides_FJ666520 AACATCAGTCTATGAGTGTTGGAGAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_epitea_AF522170 AACATCAGTCTATGAGTGTCGGATAAGGGTTTTGAGGACGTAGCAATTT- Melampsora_epitea_DQ354564 AACATCARTCTATGAGTGTTGGATAAGGGTTTYGAGAATGTAGCAATTT- Melampsora_epitea_HQ317514 AACATCAATCTRTKAGTGTTGGATAAGGGTTTCGAGAATGTAGCAATTT- Melampsora_euphorbiae_DQ437504 AACATCAGTCTATGAGTGTCKGATAAGGGTTTTGAGAATGTAGCAATTT- 'Melampsora euphorbiae-gerardianae EF192199' AACATCAGTCTATGAGTGTCGGAGAAGGGTTTTGAGAACGTAGCAATTT- 'Melampsora larici-populina JQ042250' AACATCAATCTATGAGTGTCGGAGAAGGGTTTTGAGAATGTAGCAATTTT Melampsora_populnea_f._sp._laricis_FJ666509 AACATCAGTCTATGAGTGTTGGAGAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_populnea_f._sp._pinitorqua_FJ666523 AACATCAGTCTATGAGTGTTGGAGAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._EF192193 AACATCAGTCTATGAGTGTCGGATAAGGGTTTTGAGRAYGTAGCAATTT- Melampsora_spp._EF192194 AACATCAGTCTATGAGTGTCGGATAAGGGTTTTGAGGACGTAGCAATTT- Melampsora_spp._EF192197 AACATCAGTCTATGAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._EF192202 AACATCAATCTATGAGTGTTGGATAAGGGTTTCGAGAATGTAGCAATTT- Melampsora_spp._EF192203 AACATCAATCTATGAGTGTTGGATAAGGGTTTCGAGAATGTAGCAATTT- Melampsora_spp._EF192204 AACATCAATCTGTTAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._EF192205 AACATCAATCTATGAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._EF192206 AACATCAATCTRTKAGTGTYGGATAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._EF192198 AACATCAGTCTATGGGTGTCGGAGAAGGGTTTTGAGAATGTAGCAATTT- Melampsora_spp._GU058014 AACATCAGTCTATGAGTGTTGGATAAGGGTTTTGAGAATGTAGCAATTT- Chrysomyxa_weirii_GUO49472 ----AGTTGTGTTATAGCTTGAAACTTGGATACCATGCTTGAGATTGAGG Melampsora_epitea_Mel_A ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTGGATTGAGG Melampsora_epitea_Mel_H ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_epitea_Mel_J ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_epitea_Mel_R ----AATTGTGTTATAACTTGAGACTTGGATACAATGCTTGGGATTGAGG Melampsora_epitea_Mel_S ----AATTGTGTTATAACTTGAGACTTGGATACAATGCTTGGGATTGAGG 'Melampsora abietis-canadensis FJ666513' ----AATTGTGTTATAGCTTGGGACTTGGATACAACGCTCTTGATTGAGG Melampsora_aecidioides_FJ666520 ----AATTGTGTTATAGCTTGAGACTTGGATACRATGCTTTGGATTGAGG Melampsora_epitea_AF522170 ----AATTGTGTTATAACTTGAAGCTTGGATACGATGCTTTGGATTGAGG Melampsora_epitea_DQ354564 ----AATTGTGTTATAGCTTGAGACTTGGATACRATGCTTTKGATTGAGG Melampsora_epitea_HQ317514 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_euphorbiae_DQ437504 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTGGATTGAGG 'Melampsora euphorbiae-gerardianae EF192199' ----AGTTGTGTTATAGCTTGAGACTTGGATACGATGCTTTGGATTGAGG 'Melampsora larici-populina JQ042250' TATTAATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTGGATTGAGG Melampsora_populnea_f._sp._laricis_FJ666509 ----AATTGTGTTATAGCTYGAGACTTGGATACGACGCTCTTGATTGAGG Melampsora_populnea_f._sp._pinitorqua_FJ666523 ----AATTGTGTTATAGCTTGAGACTTGGATACGACGCTCTTGATTGAGG Melampsora_spp._EF192193 ----AATTGTGTTATARCTTGAAGCTTGGATACGATGCTTTGGATTGAGG Melampsora_spp._EF192194 ----AATTGTGTTATAACTTGAAGCTTGGATACGATGCTTTGGATTGAGG Melampsora_spp._EF192197 ----AATTGTGTTATAGCTTGAGACTTGGATACRATGCTTTGGATTGAGG Melampsora_spp._EF192202 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_spp._EF192203 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_spp._EF192204 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_spp._EF192205 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_spp._EF192206 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTTGATTGAGG Melampsora_spp._EF192198 ----AATTGTGTTATAGCTTGAGACTTGGATACGATGCTTTGGATTGAGG Melampsora_spp._GU058014 ----AATTGTGTTATAGCTTGAGACTTGGATACAATGCTTTGGATTGAGG Chrysomyxa_weirii_GUO49472 ATCCTGTGGTGAGCTTAGTGCAGACTTATTTATAGGTCTTCTTGCCATGG Melampsora_epitea_Mel_A AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_epitea_Mel_H AACGCGTAGTAAGCTTTGAGCGGATTGGA--AACAATCTCCTTACTATGG Melampsora_epitea_Mel_J AACGCGTAGTAAGCTTTGTGCGGATTGGA--AACGATCTCCTTACTATGG Melampsora_epitea_Mel_R AACGCGTAGTAAGCTTTGAGCGGGYCAGA--AATGRTCTCCTTACTATGG Melampsora_epitea_Mel_S AACGCGTAGTAAGCTTTGAGCGGRYCAGA--AATGGTCTCCTTACTATGG 'Melampsora abietis-canadensis FJ666513' AACGCGTAGTAAGCTTTGAGCGGGTTCGA--AAGAATCTCCTTACTATGG Melampsora_aecidioides_FJ666520 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_epitea_AF522170 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_epitea_DQ354564 AACGCGTAGTAAGCTTTGWGCGGATTSGA--AASGATCTCCTTACTATGG Melampsora_epitea_HQ317514 AACGCGTAGTAAGCTTTGTGCGGATTGGA--AACGATCTCCTTACTATGG Melampsora_euphorbiae_DQ437504 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG 'Melampsora euphorbiae-gerardianae EF192199' AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG 'Melampsora larici-populina JQ042250' AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_populnea_f._sp._laricis_FJ666509 AACGCGTAGTAAGCTTTGAGCAGGTTCGA--AAGGATCTCCTTACTATGG Melampsora_populnea_f._sp._pinitorqua_FJ666523 AACGCGTAGTAAGCTTTGAGCAGGTTCGA--AAGGATCTCCTTACTATGG Melampsora_spp._EF192193 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_spp._EF192194 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_spp._EF192197 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_spp._EF192202 AACGCGTAGTAAGCTTTGTGCGGATTGGA--AACGATCTCCTTACTATGG Melampsora_spp._EF192203 AACGCGTAGTAAGCTTTGTGCGGATTGGA--AACGATCTCCTTACTATGG Melampsora_spp._EF192204 AACGCGTAGTAAGCTTTGTGCGGATTGGA--AACGATCTCCTTACTATGG Melampsora_spp._EF192205 AACGCGTAGTAAGCTTTGAGCGGATTGGA--AACAATCTCCTTACTATGG Melampsora_spp._EF192206 AACGCGTAGTAAGCTTTGAGCRGATTGGA--AACRATCTCCTTACTATGG Melampsora_spp._EF192198 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Melampsora_spp._GU058014 AACGCGTAGTAAGCTTTGAGCGGATTCGA--AAGGATCTCCTTACTATGG Chrysomyxa_weirii_GUO49472 ATGTTGGTGAAATAACTTGAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_Mel_A ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_Mel_H ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_Mel_J ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_Mel_R ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_Mel_S ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA 'Melampsora abietis-canadensis FJ666513' ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_aecidioides_FJ666520 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_AF522170 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_DQ354564 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_epitea_HQ317514 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_euphorbiae_DQ437504 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA 'Melampsora euphorbiae-gerardianae EF192199' ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA 'Melampsora larici-populina JQ042250' ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_populnea_f._sp._laricis_FJ666509 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_populnea_f._sp._pinitorqua_FJ666523 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192193 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192194 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192197 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192202 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192203 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192204 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192205 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192206 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._EF192198 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Melampsora_spp._GU058014 ATGTTGGTGAAATAACTTTAAGCGACCCGTCTTGAAACACGGACCAAGGA Chrysomyxa_weirii_GUO49472 GTCTAACATGCATGCGAGTATTAGGGTGTTGAAACCCGAATGCGAAATGA Melampsora_epitea_Mel_A GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_Mel_H GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_Mel_J GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_Mel_R GTCTAACATGCATGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_Mel_S GTCTAACATGCATGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA 'Melampsora abietis-canadensis FJ666513' GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_aecidioides_FJ666520 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_AF522170 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_DQ354564 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_epitea_HQ317514 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_euphorbiae_DQ437504 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA 'Melampsora euphorbiae-gerardianae EF192199' GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA 'Melampsora larici-populina JQ042250' GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_populnea_f._sp._laricis_FJ666509 GTCTAACATGCTTGCGAGTATTAGGGCGTTGAAACCCGAATGCGTAATGA Melampsora_populnea_f._sp._pinitorqua_FJ666523 GTCTAACATGCTTGCGAGTATTAGGGCGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192193 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192194 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192197 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192202 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192203 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192204 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192205 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192206 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._EF192198 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Melampsora_spp._GU058014 GTCTAACATGCTTGCGAGTATTAGGGTGTTGAAACCCGAATGCGTAATGA Chrysomyxa_weirii_GUO49472 AGGTGATGGCAAGATGTGATCTGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_epitea_Mel_A AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAT Melampsora_epitea_Mel_H AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_epitea_Mel_J AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_epitea_Mel_R AAGTGAATTTCAAATGTGATCCGCAAGGTGCAACATTGACCGGTCCTGAT Melampsora_epitea_Mel_S AAGTGAATTTCAAATGTGATCCGCAAGGTGCAACATTGACCGGTCCTGAT 'Melampsora abietis-canadensis FJ666513' AAGTGAATTTCAGATGTGATCCGCAAGGTGCAACATCGGCCGGTCCTGAT Melampsora_aecidioides_FJ666520 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAT Melampsora_epitea_AF522170 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCGGTCTGGAT Melampsora_epitea_DQ354564 AAGTGAATTTMRGATGTGATCCGCAAGGTGCAACATCGRCCRGTCYKGAT Melampsora_epitea_HQ317514 AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_euphorbiae_DQ437504 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAT 'Melampsora euphorbiae-gerardianae EF192199' AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCGGTCTGGAT 'Melampsora larici-populina JQ042250' AAGTGAATTTCAGATGTGATCCGCAAGGTGCAACATCGACCAGTCTGGAT Melampsora_populnea_f._sp._laricis_FJ666509 AAGT-AATTTCAGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_populnea_f._sp._pinitorqua_FJ666523 AAGT-AATTTCAGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192193 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCGGTCTGGAT Melampsora_spp._EF192194 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCGGTCTGGAT Melampsora_spp._EF192197 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAT Melampsora_spp._EF192202 AAGTGAATTTWGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192203 AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192204 AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192205 AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192206 AAGTGAATTTCGGATGTGATCCGCAAGGTGCAACATCGACCGGTCCTGAT Melampsora_spp._EF192198 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAA Melampsora_spp._GU058014 AAGTGAATCTAAGATGTGATCCGCAAGGTGCAACATCGGCCAGTCTGGAT Chrysomyxa_weirii_GUO49472 TATTTATATAAAGGTACTGAGTAAGAGCATGTATGTTAGGACCCGAAAGA Melampsora_epitea_Mel_A CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_Mel_H TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_Mel_J TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_Mel_R TATTTATATGACGGTACTGAGTAAGAGCATGTATGTTAGGACCCGAAAGA Melampsora_epitea_Mel_S TATTTATATGACGGTACTGAGTAAGAGCATGTATGTTAGGACCCGAAAGA 'Melampsora abietis-canadensis FJ666513' TATTTATATGACGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_aecidioides_FJ666520 CATTTATGTRAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_AF522170 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_DQ354564 YATTTATRTGAMGGTACTGAGYAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_epitea_HQ317514 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_euphorbiae_DQ437504 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA 'Melampsora euphorbiae-gerardianae EF192199' CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA 'Melampsora larici-populina JQ042250' CATTTATGTGAAGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_populnea_f._sp._laricis_FJ666509 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_populnea_f._sp._pinitorqua_FJ666523 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192193 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192194 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192197 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192202 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192203 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192204 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192205 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192206 TATTTATATGACGGTACTGAGTAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._EF192198 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Melampsora_spp._GU058014 CATTTATGTGAAGGTACTGAGCAAGAGCAAGTATGTTAGGACCCGAAAGA Chrysomyxa_weirii_GUO49472 TGGTGAACTATGCCTGGATAGAGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_Mel_A TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_Mel_H TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_Mel_J TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_Mel_R TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_Mel_S TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG 'Melampsora abietis-canadensis FJ666513' TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_aecidioides_FJ666520 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_AF522170 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_DQ354564 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_epitea_HQ317514 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_euphorbiae_DQ437504 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG 'Melampsora euphorbiae-gerardianae EF192199' TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG 'Melampsora larici-populina JQ042250' TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_populnea_f._sp._laricis_FJ666509 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_populnea_f._sp._pinitorqua_FJ666523 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192193 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192194 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192197 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192202 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192203 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192204 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192205 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192206 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._EF192198 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Melampsora_spp._GU058014 TGGTGAACTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGAAG Chrysomyxa_weirii_GUO49472 CTCGTAGCGGTTCTGACGTGCA---------------------- Melampsora_epitea_Mel_A CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_Mel_H CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_Mel_J CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_Mel_R CTCGTAGCGGTTCTGACGTGCAAATCGATCGTTGAATCTGGGTA Melampsora_epitea_Mel_S CTCGTAGCGGTTCTGACGTGCAAATCGATCGTTGAATCTGGGTA 'Melampsora abietis-canadensis FJ666513' CTCGTAGCGGTTCTGACGTGCAAATCGATCGCAGAATCTGGGTA Melampsora_aecidioides_FJ666520 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_AF522170 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_DQ354564 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_epitea_HQ317514 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_euphorbiae_DQ437504 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA 'Melampsora euphorbiae-gerardianae EF192199' CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA 'Melampsora larici-populina JQ042250' CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_populnea_f._sp._laricis_FJ666509 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_populnea_f._sp._pinitorqua_FJ666523 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192193 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192194 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192197 CTCGTAGYGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192202 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192203 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192204 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192205 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192206 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._EF192198 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA Melampsora_spp._GU058014 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGAATCTGGGTA ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 744; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 744; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 744; END; BEGIN TREES; Title Fig5_Final_LSU_Analysis_Bayesian_Concensus_Tree; LINK Taxa = Taxa; TRANSLATE 1 Chrysomyxa_weirii_GUO49472, 2 Melampsora_epitea_Mel_A, 3 Melampsora_epitea_Mel_H, 4 Melampsora_epitea_Mel_J, 5 Melampsora_epitea_Mel_R, 6 Melampsora_epitea_Mel_S, 10 'Melampsora abietis-canadensis FJ666513', 11 Melampsora_aecidioides_FJ666520, 7 Melampsora_epitea_AF522170, 8 Melampsora_epitea_DQ354564, 9 Melampsora_epitea_HQ317514, 12 Melampsora_euphorbiae_DQ437504, 13 'Melampsora euphorbiae-gerardianae EF192199', 14 'Melampsora larici-populina JQ042250', 15 Melampsora_populnea_f._sp._laricis_FJ666509, 16 Melampsora_populnea_f._sp._pinitorqua_FJ666523, 17 Melampsora_spp._EF192193, 18 Melampsora_spp._EF192194, 19 Melampsora_spp._EF192197, 20 Melampsora_spp._EF192202, 21 Melampsora_spp._EF192203, 22 Melampsora_spp._EF192204, 23 Melampsora_spp._EF192205, 24 Melampsora_spp._EF192206, 25 Melampsora_spp._EF192198, 26 Melampsora_spp._GU058014; TREE Final_LSU_Bayesian_Concensus_Tree = (1:0.368084,(5:0.007926,6:0.005305)1.00:0.067458,(((((((21:0.003943,4:0.004009)0.17:0.004048,(9:0.003895,20:0.007968)0.16:0.004082)0.55:0.008378,22:0.016656)0.55:0.011905,8:0.004316)0.48:0.013116,(24:0.004169,(23:0.004079,3:0.004083)0.72:0.013389)0.81:0.017373)0.78:0.026464,(10:0.044588,(15:0.003852,16:0.003969)1.00:0.0197)1.00:0.022031)0.86:0.017656,(((25:0.013237,11:0.021285)0.88:0.00837,((12:0.020845,13:0.021794)0.42:0.007554,(((26:0.006928,19:0.003994)0.46:0.006212,2:0.004056)0.84:0.01023,((18:0.003827,7:0.003953)0.45:0.005914,17:0.00388)1.00:0.028439)0.80:0.008479)0.33:0.004948)1.00:0.030056,14:0.004679)1.00:0.037626)0.83:0.03201); TREE con_all_compat = (1:0.368084,(5:0.007926,6:0.005305):0.067458,(((((((21:0.003943,4:0.004009):0.004048,(9:0.003895,20:0.007968):0.004082):0.008378,22:0.016656):0.011905,8:0.004316):0.013116,(24:0.004169,(23:0.004079,3:0.004083):0.013389):0.017373):0.026464,(10:0.044588,(15:0.003852,16:0.003969):0.0197):0.022031):0.017656,(((25:0.013237,11:0.021285):0.00837,((12:0.020845,13:0.021794):0.007554,(((26:0.006928,19:0.003994):0.006212,2:0.004056):0.01023,((18:0.003827,7:0.003953):0.005914,17:0.00388):0.028439):0.008479):0.004948):0.030056,14:0.004679):0.037626):0.03201); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1388780509030; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5996153954845061974; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5229987361551970609; mqVersion 274; checksumv 0 2 4069317516 null getNumChars 744 numChars 744 getNumTaxa 26 numTaxa 26 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 432380.0 sumSquares -2.3058430092136833E19 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 582; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1165 855; setLocation -66 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #5996153954845061974 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #5996153954845061974; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 264; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 583 788; setLocation -66 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5996153954845061974 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 2399.1388780084508.5758676325380504641; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 583 788; setLocation -66 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.interchange; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 2; orientRight; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames on; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(((5:0.007926,6:0.005305)1.00:0.067458,(((((((21:0.003943,4:0.004009)0.17:0.004048,(11:0.003895,20:0.007968)0.16:0.004082)0.55:0.008378,22:0.016656)0.55:0.011905,10:0.004316)0.48:0.013116,(24:0.004169,(23:0.004079,3:0.004083)0.72:0.013389)0.81:0.017373)0.78:0.026464,(7:0.044588,(15:0.003852,16:0.003969)1.00:0.0197)1.00:0.022031)0.86:0.017656,(((25:0.013237,8:0.021285)0.88:0.00837,((12:0.020845,13:0.021794)0.42:0.007554,(((26:0.006928,19:0.003994)0.46:0.006212,2:0.004056)0.84:0.01023,((18:0.003827,9:0.003953)0.45:0.005914,17:0.00388)1.00:0.028439)0.80:0.008479)0.33:0.004948)1.00:0.030056,14:0.004679)1.00:0.037626)0.83:0.03201),1:0.368084);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;