#NEXUS [written Tue Jul 14 10:42:17 CDT 2015 by Mesquite version 3.02 (build 681) at SEC-1337-PLETCH/130.160.36.70] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=22; TAXLABELS Rhizidium_phycophilum_KP_013 Obelidium_mucronatum_JEL_057 Rhizoclosmatium_globosum_WJD_111 Chytriomyces_clade_WB_235A Chytriomyces_hyalinus_Barr_097 Asterophlyctis_sarcoptoides_JEL_186 Pseudorhizidium_endosporangiatum_JEL_221 Delfinachytrium_mesopotamicum_ARG_113 Dendrochytridium_crassum_JEL_353 Dendrochytridium_crassum_JEL_354 Irineochytrium_annulatum_JEL_729 Chytridium_olla_ARG_100 Phlyctochytrium_bullatum_ARG_112 Phlyctochytrium_bullatum_JEL_754 Phlyctochytrium_planicorne_JEL_047 Phlyctochytrium_planicorne_ARG_109 Phlyctochytrium_planicorne_JEL_388 Dinochytrium_kinnereticum_JEL_364 Dinochytrium_kinnereticum_KLL_TL_060613_ Chytridium_lagenaria_PL_167B Chytridium_lagenaria_ARG_066 Phlyctochytrium_aureliae_KP_061 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=840; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Rhizidium_phycophilum_KP_013 GCTCAAATTTAAAATCTCCTAGGTTCCCTAGGCGAATTGTAGTTTCAAGAAGCGT-TTTCTGAGGTGGCCTCGGTCCAAG-CTGCTGGAAGGCAGCGCCA Obelidium_mucronatum_JEL_057 GCTCAAATTTAAAATCTCCTAGGTTCCCTAGGCGAATTGTAGTTTCAAGAAGTGT-TTTCTGAGATAGGCTCGGTCCAAG-CTGCTGGAAGGCAGCGCCA Rhizoclosmatium_globosum_WJD_111 GCTCAAATTTAAAATCTCCTAGGTTCCCTAGGCGAATTGTAGTTTCAAGAAGCGTATTTCTGAGGTGGCCGCGGACCAAGTCTGCTGGAAGGCAGCGCCA Chytriomyces_clade_WB_235A GCTCAAATTTGAAATCTGGCAGGTTCCCTGTCCGAATTGTAGTTTCAAGGTGCGT-TTTCGGGGGCGGCTTAGGTCCAAG-CTGTTGGAATGCAGCGCCG Chytriomyces_hyalinus_Barr_097 GCTCAAATTTGAAATCTCACTGGTTTCCAGTGCGAATTGTAGTTTCAAGAAGCGT-TTTCGGGGACGACTTGGGTCCAAG-CTGTTGGAACGCAGCGCCA Asterophlyctis_sarcoptoides_JEL_186 GCTCAAATTTGAAATCTCTCGGGTTCCCCGAGCGAATTGTAGTTTCAAGAGGCGC-TTTCGGGGGCAGCCTTGGACCAAGTCCGCTGGAACGCGGCACCA Pseudorhizidium_endosporangiatum_JEL_221 GCTCAATTTTGAAATCTCTCAGGTTCCCTGAGCGAATTGTAGTTTCAAGAAACAT-TTTTGGGGGCGGTCCGGGTAAAAG-CCGTTGGAACGCGGCATCA Delfinachytrium_mesopotamicum_ARG_113 GCTCAATTTTGAAATCTCTCAGGTTCCCTGAGCGAATTGTAGTTTCTAGAAACGT-TTTCGGGGGCAGCCCGGGTAAAAGTCCGTTGGAACGCGGCATCA Dendrochytridium_crassum_JEL_353 GCTCAATTTTGAAATCTC-C---TT---CGGGCGAATTGTAGTTTAGAGAAGCGC-TTTCGGGGATGAAGCCGGCCCAAG-CGTCTGGAACGACGCGCCA Dendrochytridium_crassum_JEL_354 GCTCAATTTTGAAATCTC-C---TT---CGGGCGAATTGTAGTTTAGAGAAGCGC-TTTCGGGGATGAAGCCGGCCCAAG-CGTCTGGAACGACGCGCCA Irineochytrium_annulatum_JEL_729 GCTCAATTTTGAAATCTCGCGGGTTTCCCGTGCGAATTGTAGTTTAT-GAAGCGT-TTTCGGGGACTCCCTGGGTGTAAGTCCTTTGGAATGAGGCGTCA Chytridium_olla_ARG_100 GCTCAACTTTGAAATCTCTCGGTTTCCCTGTGCGAATTGTAGTCTAAAGAAGCGT-TTTCGGGGGCGGCTCGGGTAAAAG-CCTTTGGAACAAGGCATCA Phlyctochytrium_bullatum_ARG_112 GCTCAACTTTGAAATCTCGCGGGTTCCCCGTGCGAATTGTAGTCTAAAAAAGCGC-TTTCGGGGGCGGCCTGGGCACAAGTCCTTTGGAACAAGGCATCA Phlyctochytrium_bullatum_JEL_754 GCTCAACTTTGAAATCTCACAGGTTCCCTGTGCGAATTGTAGTCTCAAGAAGCGC-TTTCGGGGGCGGCCTGGGCACAAGTCCTTTGGAACAAGGCATCA Phlyctochytrium_planicorne_JEL_047 GCTCAACTTTAAAATCTCGCGGGTTCCCAGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGAGGCGGCCTGGGTAAAAGTTCCTTGGAACAGGACATCA Phlyctochytrium_planicorne_ARG_109 GCTCAACTTTAAAATCTCGCAGGTTTCCTGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGGGACGGCCTGGGTAAAAGTTCCTTGGAACAGGACATCA Phlyctochytrium_planicorne_JEL_388 GCTCAACTTTAAAATCTCGCGGGTTTCCCGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGAGGCGGCCTGGGTAAAAGTTCCTTGGAACAGGACATCA Dinochytrium_kinnereticum_JEL_364 GCTCAACTTTGAAATCTCGCGGGTTTCCCGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGGGGCGGCCTGGGTAAAAGTCCGTTGGAACACGGCATCA Dinochytrium_kinnereticum_KLL_TL_060613_ GCTCAACTTTGAAATCTCGCGGGTTTCCCGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGGGGCGGCCTGGGTAAAAGTCCGTTGGAACACGGCATCA Chytridium_lagenaria_PL_167B GCTCAACTTTGAAATCTCGCGGGTTTCCCGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGGGGCAGCCTGGGTAAAAG-CCTTTGGAAGAAGGCATCA Chytridium_lagenaria_ARG_066 GCTCAACTTTGAAATCTCGCGGGTTCCCCGTGCGAATTGTAGTCTAAAGAAGCGC-TTTCGGGGGCAGCCTGGGTAAAAG-CCGTTGGAACACGGCATCA Phlyctochytrium_aureliae_KP_061 GCTCAACTTTGAAATCTCACAGGTTTCCTGTGCGAATTGTAGTCTAAAGAAGCGT-TTTCGGGGGCAGCCTGGGTCCAAGTCCCTTGGAACAGGGTATCA Rhizidium_phycophilum_KP_013 TAGAGGGTGATAGCCCCGTAG--GATCCTGAA-CCATTTCTTTAT-ATTGCGTCTTCAAAGAGTCGTACAGTTTGAGAATGCTGTGCTAAATGGGAGGTA Obelidium_mucronatum_JEL_057 TAGAGGGTGATAGCCCCGTAG--GATCCTGCTTCTATTTCTTTAT-ATTGCATCTTCGAAGAGTCGTACAGTTTGAGAATGCTGTGCTAAATGGGAGGTA Rhizoclosmatium_globosum_WJD_111 TAGAGGGTGATAGCCCCGTAG--GTCTCTGAGTCCACTTCGTTATGATTGCGTCTTCGAAGAGTCGTACAGTTTGAGAATGCTGTGCTAATTGGGAGGTA Chytriomyces_clade_WB_235A TAGAGGGTGAGAGCCCCGTAG--GGCCTGACGTTCGCTCCTGTAT-AT-ACGTATCCGAAGAGTCGCATAGTTTGAGAATGCTGTGCAAATTGGGTGGTA Chytriomyces_hyalinus_Barr_097 GAGAGGGTGAGAGCCCCGTTC--GGCCCGATGTTCGTTCCTGTAT-AT-ACGTTTTCAAAGAGTCGCATAGTTTGGGAATGCTGTGCAAAGTGGGTGGTA Asterophlyctis_sarcoptoides_JEL_186 CAGAGGGTGAGAGTCCCGTTG--GTCCAGGCGTCTGCTCCTATGTGAT-GCGTTTTCAACGAGTCGCGTAGTTTGGGAATGCTGCGCAAATTGGGTGGTA Pseudorhizidium_endosporangiatum_JEL_221 TGGAGGGTGAGAATCCCGTTCTTGATCCGGTGTCCGCTCCTGTGT-AT-ATGTTTTCAAAGAGTCGGATAGTTTGGGATTGCTGTCCAAAATGGGTGGTA Delfinachytrium_mesopotamicum_ARG_113 TGGAGGGTGAGAATCCCGTATTTGATCCGGTGTCTGCTCCTATGTGAT-ACGTTTTCAAAGAGTCGGATAGTTTGGGATTGCTGTCCAAAATGGGTGGTA Dendrochytridium_crassum_JEL_353 GAGAGGGTGAGAGCCCCGTTC--GG-CCGGT-CGAGTCCCTATGT-AT-GTGTCTTCCAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAACGGGTGGTA Dendrochytridium_crassum_JEL_354 GAGAGGGTGAGAGCCCCGTTC--GG-CCGGT-CGAGTCCCTATGT-AT-GTGTCTTCCAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAACGGGTGGTA Irineochytrium_annulatum_JEL_729 GAGAGGGTGAGAATCCCGTCCTTAACCCGGTGTGGGTCCCTATGTGAT-GCGTCTTCTAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAATGGGTGGTA Chytridium_olla_ARG_100 GAGAGGGTGAGAATCCCGTACCTGACCCGGTGTTCGCTCCTATGT-AT-ACGTCTTCAAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAATGGGTGGTA Phlyctochytrium_bullatum_ARG_112 GAGAGGGTGAGAATCCCGTACCTGGTCCGGTGTCCGCTCCTATGTGAT-GCGTCTTTTAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Phlyctochytrium_bullatum_JEL_754 GAGAGGGTGAGAATCCCGTACCTGGTCCGGTGTCCGCTCCTATGTGAT-GCGTCTTCGTAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGTGGGTGGTA Phlyctochytrium_planicorne_JEL_047 GAGAGGGTGAGAATCCCGTACCTGACCCAGTGTTCGTTTCTATGTGAT-GCGTCTTTGAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Phlyctochytrium_planicorne_ARG_109 GAGAGGGTGAGAATCCCGTACCTGACCCAGTGTTCGTTTCTATGTGAT-GCGTCTTTGAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Phlyctochytrium_planicorne_JEL_388 GAGAGGGTGAGAATCCCGTACCTGACCCAGTGTTCGTTTCTATGTGAT-GCGTCTTTGAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Dinochytrium_kinnereticum_JEL_364 GAGAGGGTGAGAATCCCGTACCTGACCCGGTGTCCGCTCCTATGTGAT-GCGTCTTCCTAGAGTCGGATAGCTTGGGAATGCTGTCCAAATCGGGTGGTA Dinochytrium_kinnereticum_KLL_TL_060613_ GAGAGGGTGAGAATCCCGTACCTGACCCGGTGTCCGCTCCTATGTGAT-GCGTCTTCCTAGAGTCGGATAGCTTGGGAATGCTGTCCAAATCGGGTGGTA Chytridium_lagenaria_PL_167B GAGAGGGTGAGAATCCCGTACCTGACCCGGTGTCTGCTCCTATGT-AT-GCGTCTTCCTAGAGTCGGATAGCTTGGGAATGCTGTCCAAATCGGGTGGTA Chytridium_lagenaria_ARG_066 GAGAGGGTGAGAATCCCGTACCTGACCCGGTGTTTGCTCCTATGT-AT-GCGTCTTCCTAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Phlyctochytrium_aureliae_KP_061 AAGAGGGTGAGAATCCCGTACTTGACTCCGTGTCTGCTCCTATGTGAT-ACGTCTTCGAAGAGTCGGATAGCTTGGGAATGCTGTCCAAAGCGGGTGGTA Rhizidium_phycophilum_KP_013 AATATCTTCTAAAGCTAAATACTGGCGTGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTG Obelidium_mucronatum_JEL_057 AATATCTTCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTG Rhizoclosmatium_globosum_WJD_111 AATATCTTCTAAAGCTAAATACTGGCGTGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTG Chytriomyces_clade_WB_235A AATATCATCTAAAGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAA-AGTACGTG Chytriomyces_hyalinus_Barr_097 AATATCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTG Asterophlyctis_sarcoptoides_JEL_186 AATACCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Pseudorhizidium_endosporangiatum_JEL_221 AATACCATCTAAAGCTAAATATTGGCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Delfinachytrium_mesopotamicum_ARG_113 AATACCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Dendrochytridium_crassum_JEL_353 AATACCATCTAAAGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAA-AGTACGTG Dendrochytridium_crassum_JEL_354 AATACCATCTAAAGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAA-AGTACGTG Irineochytrium_annulatum_JEL_729 AATACCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Chytridium_olla_ARG_100 AATACCATCTAAGGCTAATTATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_bullatum_ARG_112 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_bullatum_JEL_754 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_planicorne_JEL_047 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_planicorne_ARG_109 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_planicorne_JEL_388 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Dinochytrium_kinnereticum_JEL_364 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Dinochytrium_kinnereticum_KLL_TL_060613_ AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Chytridium_lagenaria_PL_167B AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Chytridium_lagenaria_ARG_066 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Phlyctochytrium_aureliae_KP_061 AATACCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTG Rhizidium_phycophilum_KP_013 AAATTGTCTAAAGTGAAACGTTTGAAACTAGTATCGGGAGATTACGGACAACCGCA--------AGGTGCATTCGTGGTTTCCTGTGCCAGCGACGGTTT Obelidium_mucronatum_JEL_057 AAATTGTCTAAAGTGAAACGTTTGAAACTAGTATCGGAAGGTGATGGACAACCGCA--------AGGTGCATTCATTGCTTTCTGTGCCAGCGACAGTTT Rhizoclosmatium_globosum_WJD_111 AAATTGTCTAAAGTGAAACGTTTGAAACCAGTATCGGAGGGCGATGGACAACCGCA--------AGGTGCATTCATCGCATTCTGTGCCAGCGACATTTT Chytriomyces_clade_WB_235A AAATTGTCAAAAGGGAAACGCTTGAAACCAGTATCGGGACTAGATTATCAACCGCA--------AGGTGCATTAGTCTAGTTCTGGGTTAGCATCAGTTT Chytriomyces_hyalinus_Barr_097 AAATTGTCAAAAGGGAAACGCTTGGAACCAGTATTGGGCCTAGATTATCAGCCGCA--------AGGTGCACTAGTCTAGGTCCGGGTCAGCATCAGTTT Asterophlyctis_sarcoptoides_JEL_186 AAATTGTCAAAAGGGAAACGCTTGAAACCAGTATTCCGTGCCGCAAATCAGCCGCA--------AGGTGCACTTTGGCGCACGGGGGTCAGCATCAGTTT Pseudorhizidium_endosporangiatum_JEL_221 AAATTGTCAAAAGGGAAACGCTTGAAACCAGTATTGCGATGCGCAAATCAGTCGTCCATTAGGACGGTGCACTTTGCGTATTGCGGGTCAGCATCAGTTT Delfinachytrium_mesopotamicum_ARG_113 AAATTGTCAAAAGGGAAACGCTTGAAACCAGTATTGCGGTGCGCAAATCAGTCGTTCACTAGAACGGTGCACTTTGCGTATTGCGGGTCAGCATCAGTTT Dendrochytridium_crassum_JEL_353 AAATTGTGTAAAGGGAAACGCTTGATACCAGTATTGGCGTGCGCAGATCAGCCGTTCATTAGGGCGGTGCACTCTGTGTACGCCGGGTCAGCATCGGTTC Dendrochytridium_crassum_JEL_354 AAATTGTGTAAAGGGAAACGCTTGATACCAGTATTGGCGTGCGCAGATCAGCCGTTCATTAGGGCGGTGCACTCTGTGTACGCCGGGTCAGCATCGGTTC Irineochytrium_annulatum_JEL_729 AAATTGTCTAAAGGGAAACGCTTGAAACCAGTGTTGTGCGGTGTAGATCAGCCGTCCATCAGGGCGGTGCACTCTACATTGTGCGAGTCAGCATCGGTTT Chytridium_olla_ARG_100 AAATTGTCTAAAGGGAACGGCTTGAAACCAGTATTGCGCGTCAGAGATCAGCCATCCATTAGGGTGGTGCACTCTCTGGCGTGCGGGTCAGCATCGGTTT Phlyctochytrium_bullatum_ARG_112 AAATTGTCTAAAGGGAAAGACTTGCAACCAGTATTGCGCGTCTGCGATCAGCCGTCCT-TCGGGCGGTGCACTCGTAGCCGTGCGGGTCAGCATCGGTTT Phlyctochytrium_bullatum_JEL_754 AAATTGTCTAAAGGGAAAGACTTGCAACCAGTATTGCGCGTCAGAGATCAGCCGTCCA-TAGGGCGGTGCACTCTCTGCCGTGCGGGTCAGCATCGGTTC Phlyctochytrium_planicorne_JEL_047 AAATTGTCTAAAGGGAAAGGCTTGAAACCAGTATTGCGCGTCAGAGATCAGCCGTCCG-TAGGGCGGTGCACTCTCTGCCGTGCGGGTCAGCATCGGTTT Phlyctochytrium_planicorne_ARG_109 AAATTGTCTAAAGGGAAAGGCTTGAAACCAGTATTGTGCGTCAGAGATCAGCCGTCCA-TAGGGCGGTGCACTCTCTGCCGTGCGGGTCAGCATCGGTTT Phlyctochytrium_planicorne_JEL_388 AAATTGTCTAAAGGGAAAGGCTTGAAACCAGTATTGCGCGTCAGAGATCAGCCGTCCA-TAGGGCGGTGCACTCTCTGCCGTGCGGGTCAGCATCGGTTT Dinochytrium_kinnereticum_JEL_364 AAATTGTCTAAAGGGAACGACTTGAAACCAGTATTGCGCGTCAGAGATCAGTCGTCCTTTCGGGCGGTGCACTCTTTGGCGTGCGGGTCAGCATCGGTTT Dinochytrium_kinnereticum_KLL_TL_060613_ AAATTGTCTAAAGGGAACGACTTGAAACCAGTATTGCGCGTCAGAGATCAGTCGTCCTTTCGGGCGGTGCACTCTTTGGCGTGCGGGTCAGCATCGGTTT Chytridium_lagenaria_PL_167B AAATTGTCTAAAGGGAACGGCTTGAAACCAGTATTGCGTGTAATAGATCAGCCGTCCATATGGGCGGTGCACTCTATTGCATGCGGGTCAGCATCGGTTT Chytridium_lagenaria_ARG_066 AAATTGTCTAAAGGGAACGGCTTGAAACCAGTATTGCGTGTAATAGATCAGCTGTCCATTAGGGCGGTGCACTCTATTGCATGCGGGTCAGCATCGGTTT Phlyctochytrium_aureliae_KP_061 AAATTGTCTAAAGGGAACGGCTTGGAACCAGTATTGCGCGTCGGAGATCAGCCGTCCATACGGGCGGTGCACTCTCTTGCGTGCGGGTCAGCATCGGTTT Rhizidium_phycophilum_KP_013 CGTTTGCAGTAAATGC-TCCTGGGAATGTAGCT-----TC-GG--TGTTATAGCTCAGGG-TGAGTGCTGTGGACGGGACCGATGATCGCCACT---GCC Obelidium_mucronatum_JEL_057 TGTTTGGAGTAAATAC-GCTTAGGAATGTAGCT---CCTC-GGAGTGTTATAGCCTTTGT-AT-GTGCTCTGGGCGAGACTGATGATCGCCACT---GCC Rhizoclosmatium_globosum_WJD_111 GGTCTGAAGTAAATAG-ATTAGGGAATGTAGGT---CCTC-GGACTGTTATAGCCTTGGT-TT-GTGCTTTGGATTAGAATGATGATCGCCACT---GCC Chytriomyces_clade_WB_235A GGTTTGGAGTAAAAAG-CGAGTGGAAGGTAGCC---TTTC-GAGGTGTTATAGCCGCTCG-TC-ATGCTCTGGACTGGACTGAGGACCGCAGGT---ATT Chytriomyces_hyalinus_Barr_097 GGTTTGGAGTAAAAAG-CCAGTGGAAGGTAGCT-----TC-GG--TGTTATAGCCGCTGG-TC-ATGCTCTGGACTGGACTGAGGTCTGCAGCC---GCC Asterophlyctis_sarcoptoides_JEL_186 GGGCTCGGGTAAAAAGTCGAACGGAAGGTGGCT----CT--GC---GTTATAGCCGTCCGACC-ATGCCCGGGACCAGACTGAGGACTGCAGCCACTGCA Pseudorhizidium_endosporangiatum_JEL_221 CGCTCGGAGTAAAAAA-CCAGAGGAAGGTAGCTTTT-TAA-GG--TGTTATAGCCTCTGG-TC-ATGCTCTGGGTGGGACTGAGGTCTGCAGCC-TTGCT Delfinachytrium_mesopotamicum_ARG_113 CGTTCGGAGTAAAAAG-CTAGAGGAAGGTAGCTCTT-TTTTGAG-TGTTATAGCCTCTGG-TC-ATGCTTTGGACGGGACTGAGGTCTGCAGCC-TTGCT Dendrochytridium_crassum_JEL_353 GACGTGGGGTACAAAG-CCGCGGGAAGGTGACC----TCT-GGG-TGTTATAGCCCGCGG-TC-ATGCCCCGTGTTGGACCGAGGACCGCAGTC-GCGCT Dendrochytridium_crassum_JEL_354 GACGTGGGGTACAAAG-CCGCGGGAAGGTGACC----TCT-GGG-TGTTATAGCCCGCGG-TC-ATGCCCCGTGTTGGACCGAGGACCGCAGTC-GCGCT Irineochytrium_annulatum_JEL_729 GGCCTGGGGCAAAAAG-CGGGAGGGAGGT-----T--TTC-GGA-TCTGCTTGCCT---G-TC-ATACCCTGGACTAGACCGAGGAACGCAGCC-ATGTC Chytridium_olla_ARG_100 TGCTTAAAGTATAAAG-CTTGAGGAAGGTGACCCTT-GT--GGG-TGTTATAGCCTCAAG-TC-ATGCTTTGGGCGAGACCGAGGACCGCAGCC-ATGCT Phlyctochytrium_bullatum_ARG_112 GGTTTGAGGTACAAAG-CGCGAGGAAAGTAGCCGTT-TTT-CGG-TGTTATAGCCTCGCG-TC-ATGCCTTGGACTGGACCGAGGAACGCAGCC-TTGCC Phlyctochytrium_bullatum_JEL_754 GATCTGAGGTATAAAG-CGCGAGGAAGGTGGCC----TT--CGGGCGTTATAGCCTCGCG-TC-ATGCCTTGGGTTGGACCGAGGAACGCAGCC-TTGCC Phlyctochytrium_planicorne_JEL_047 GACTTGGAGTACAAAG-CTGTTGGAAGGTAGC-----TT--CGG-TGTTATAGCCTTCAG-TC-ATGCTCCGGGTTGGACCGAGGAACGCAGCC-TTGCT Phlyctochytrium_planicorne_ARG_109 GACTTGGAGTACAAAG-CTGTTGGAAGGTAGC-----TT--CGG-TGTTATAGCCTTCAG-TC-ATGCTCCGGGTTGGACCGAGGAACGCAGCC-TTGCT Phlyctochytrium_planicorne_JEL_388 GACTTGGAGTACAAAG-CTGTTGGAAGGTAGC-----TT--CGG-TGTTATAGCCTTCAG-TC-ATGCTCCGGGTTGGACCGAGGAACGCAGCC-TTGCT Dinochytrium_kinnereticum_JEL_364 GAATCGGGGTATAAAG-CTGGAGGAAGGTGACCCT--TT--GGG-TGTTATAGCCTCCAG-TC-ATGCCCCGGTTTGGACCGAGGAACGCAGCC-TTGCT Dinochytrium_kinnereticum_KLL_TL_060613_ GAATCGGGGTATAAAG-CTGGAGGAAGGTGACCCT--TT--GGG-TGTTATAGCCTCCAG-TC-ATGCCCCGGTTTGGACCGAGGAACGCAGCC-TTGCT Chytridium_lagenaria_PL_167B GATTTGGGTTATAAAG-CTGTCGACAGGTAGCC----CTC-GGAGTGTTATAGTCTTCAG-TC-ATGCCCCGGATTAGACCGAGGAACGCAGCC-TTGTT Chytridium_lagenaria_ARG_066 GACTTGGGTTATAAAG-CTGTTGACAGGTAGC--T--CTT-GAGGTGTTATAGTCTTCAG-TC-ATGCCCCGGGTTGGACCGAGGAACGCAGCC-TTGTT Phlyctochytrium_aureliae_KP_061 GGCTTGGGGTAAAAAG-CGTGTGGAAAGTGACC----TTC-GGG-TGTTATAGCCGCACG-TC-ATGCCCCGGACCGGACCGAGGACCGCAGCC-CTGCT Rhizidium_phycophilum_KP_013 TTGGGG-A-AGCG-G-TGCCT-CGAAGCG-AGCGGCGCTAGACAACTTGTTGACTAGTGCTGT-CT-TCGTTAGGGACCG-GTCGTGTA--CCACTTAC- Obelidium_mucronatum_JEL_057 TTGGGG-A-AGCT-G-TGCCT-CGAAGCG-GATGTTTATAGACAACTTGTTGACTATGAATGT--T-TCGTTAGGGATCG-GTTGTGTA--CCACTAAC- Rhizoclosmatium_globosum_WJD_111 TTGGGG-A-AGCA-G-TGCCT-CGAAGCT-ACCGCCTGTGGACAACTTGTTGATCATGGGTGA-AT-A-GTTAGGGATCG-GTTGTGTA--CCACTCTC- Chytriomyces_clade_WB_235A TTGGGG-A-ACTT-G-CGCCA-TGGAAAG-CCCATGTATAAACAACTTGTTGATTATGCGTGT--G-C-CCAAGTGCACG-GTAGGGTA--CCACTTCT- Chytriomyces_hyalinus_Barr_097 TGGGGG-A-ATAT-G-CGCCT-CGAAACA-CGCATTGGTAGACAACTTGTTGATTACTGGTGT-TG-T-GCTAGAGCACG-GTATAGTA--CCACTACC- Asterophlyctis_sarcoptoides_JEL_186 TTGGGG-A-AGCC-G-CCGCCCCCGACCG-CCCGCTGGCCGACTACTTGTAGACGTCCGGCGACCG-C-CTAGGGGCCCG-GTGGTGTA--CCACTCTG- Pseudorhizidium_endosporangiatum_JEL_221 TTTGGG-ACGCTT-T-AGCCC-TCTAACG-TTGTGTGCCGGACAGCTTGCTGATCGTCGCTCA-AT-C-TAGGAGGCCCT-GTTGGCTT--ACACAACTA Delfinachytrium_mesopotamicum_ARG_113 TTTGGG-ACGTCG-G-AGCCC-TTTGATA-TCTGGCTGTAAACTGCTTGCAGATTACGGCTCG-GT-T-AAGATGGCCCT-GTCGGCTT--ACACAACTA Dendrochytridium_crassum_JEL_353 TTTGGGGA-ACCG-TTCGCCT--TGCGCC-GAAGCTAACCGACAACTTGTTGACGTTTGGTGT---AC-AGC-GTACGCACGGGCGGCTA-CCACAACAC Dendrochytridium_crassum_JEL_354 TTTGGGGA-ACCG-TTCGCCT--TGCGCC-GAAGCTAACCGACAACTTGTTGACGTTTGGTGT---AC-AGC-GTACGCACGGGCGGCTA-CCACAACAC Irineochytrium_annulatum_JEL_729 ATTGGGGA-ACCGACATGCCT-CTTCTTT-CGCATAGGCAGACAACTTGTTGACTGTCATTGT-TGAA---C-GTTGCGCCATTCGGCTA-CCACACCTT Chytridium_olla_ARG_100 ATTGGGGA-AGCG-G-CGCCT-CTTTTTA-CGCGTTGCCAAACAACTTGTTGATTGGTGGCGT-CTTG-TGAATTGCGCACGGTCGTCTAACCACACCTT Phlyctochytrium_bullatum_ARG_112 ATGGGGGA-ACCC-G-CGCCT-CTCTAAT-CGCGGAGCCAAACAGCATGCTGATTGGTCTCGT-TGAT-TG--TTGCGCTCGTCGGGCTA-CCACTTCTG Phlyctochytrium_bullatum_JEL_754 ATGGGGGA-ACCC-G-CGCCT-CTTCAAT-CGCGGAGTCAAACAGCATGCTGATTGGCACCGT-TGCT-TG--TTGCGCCCGTCGGGCTA-CCACTTCTG Phlyctochytrium_planicorne_JEL_047 ATGGGGGA-ACCC-G-CGCCT-CTTTGGTGCGCAGAGTCAAACAACTTGTTGATTTTCTCTGT-TGCC-CA--TTGCGCACGGCGGGCTA-CCACTTCTG Phlyctochytrium_planicorne_ARG_109 ATGGGGGA-ACCC-G-CGCCT-CTTTAGTGCGCAGAGTCAGACAACTTGTTGACTTTCTCTGT-TGCC-TA--TTGCGCACGGCGGGCTA-CCACTTCTG Phlyctochytrium_planicorne_JEL_388 ATGGGGGA-ACCC-GTCGCCT-CTTTGGTGCGCAGAGTCAAACAACTTGTTGATTTTCTCTGT-TGCC-CA--TTGCGCACGGCGGGCTA-CCACTTCTG Dinochytrium_kinnereticum_JEL_364 ATGGGGGA-ACCG-GTCGCCT-CTTCTGT-CTCGAGATCAAACAACTTGTTGATTGCTTTTGA-AAAC-AG--TTGCGCTCGGCCGGCTA-CCACTTCTG Dinochytrium_kinnereticum_KLL_TL_060613_ ATGGGGGA-ACCG-GTCGCCT-CTTCTGT-CTCGAGATCAAACAACTTGTTGATTGCTTTTGA-AAAC-AG--TTGCGCTCGGCCGGCTA-CCACTTCTG Chytridium_lagenaria_PL_167B ACGGGGGA-ACC--TTCGCCT-CGGATGT-CGCACTGTCAAACAACTTGTTGATTGCTGGTGT-TAAG-TC---TGCGCACGGTTGGCTA-CCACTTCTG Chytridium_lagenaria_ARG_066 ATGGGAGA-ACC--TTCGCCT-CTTTAGT-CCCGCTGGCAAACAACTTGTTGATTGTTGGTGA-AGCT-CTA-TTGCGCACGGTTGGCTA-CCACTTCTG Phlyctochytrium_aureliae_KP_061 ACGGGGGA-ACTT-G-TGCCT-ATCGATT-CGCGCTTTCAGACAACTTGTTGACTGCGAGCGT-TGCT-TC--GGTAGCCCGTCTTGCTA-CCACTTCAG Rhizidium_phycophilum_KP_013 AGTGTAGGTTGCTGGTGAAATAGTTTTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTTCTACAAATGCGCGAGTCGTTGGGTGTCAAACCCGAGGGC Obelidium_mucronatum_JEL_057 AGTGTAGGTCGCTGGTGAAATAGTTTTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTTCTACAAATGCGCGAGTCTTTGGGTGTCAAACCCGAGGGC Rhizoclosmatium_globosum_WJD_111 AGTGTAGGTCGCTGGTGAAATGGTTTTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTTCTACAAATGCGCGAGTCTTTGGGTGTCAAACCCGAGGGC Chytriomyces_clade_WB_235A ACCTTAGGATGCTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACACATGCGAGTGTTTGGGTGGCAAACCCGAGCGC Chytriomyces_hyalinus_Barr_097 GGCTTAGGATGTTGACGAAATGGTTCTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACACATGCGAGTGTTTGGGTGGCAAACCCGAGCGC Asterophlyctis_sarcoptoides_JEL_186 GGCTTGGGATGCTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACACACGCGAGTCTTTGGGTGGCAAACCCGAGGGC Pseudorhizidium_endosporangiatum_JEL_221 GGCTTAGGATGCTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACAATCCTGCGAGTGTTTGGGTGGCAAACCCGAGCGC Delfinachytrium_mesopotamicum_ARG_113 GGCTTAGGATGCTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACAATCCTGCGAGTGTTTGGGTGGCAAACCCGAGCGC Dendrochytridium_crassum_JEL_353 GGCTTAGGATGCTGACGAAATGGTCTCAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATGTGCGAGTCTTTGGGTGGCAAACCCGAGGGC Dendrochytridium_crassum_JEL_354 GGCTTAGGATGCTGACGAAATGGTCTCAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATGTGCGAGTCTTTGGGTGGCAAACCCGAGGGC Irineochytrium_annulatum_JEL_729 GGCTTAGGATGCTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCATGGGC Chytridium_olla_ARG_100 GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCACGGGC Phlyctochytrium_bullatum_ARG_112 GGCTTAGGATGCTGACGAAATGGTTGTAAATCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCATGGGC Phlyctochytrium_bullatum_JEL_754 GGCTTAGGATGCTGACGAAATGGTTGTAAATCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATACGCGAGTCTTTGGGTGGCAAACCCATGGGC Phlyctochytrium_planicorne_JEL_047 GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACAAATGTGCGAGTCTTTGGGTGGCAAACCCACGGGC Phlyctochytrium_planicorne_ARG_109 GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACAAATGTGCGAGTCTTTGGGTGGCAAACCCACGGGC Phlyctochytrium_planicorne_JEL_388 GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACAAATGTGCGAGTCTTTGGGTGGCAAACCCACGGGC Dinochytrium_kinnereticum_JEL_364 GGCTTAGGATGCTGACGAAATGGTTTTAAATCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATGTGCGAGTCTTTGGGTGGCAAACCCACGGGC Dinochytrium_kinnereticum_KLL_TL_060613_ GGCTTAGGATGCTGACGAAATGGTTTTAAATCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATGTGCGAGTCTTTGGGTGGCAAACCCACGGGC Chytridium_lagenaria_PL_167B GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCACGGGC Chytridium_lagenaria_ARG_066 GGCTTAGGATGCTGACGAAATGGTTTTAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCACGGGC Phlyctochytrium_aureliae_KP_061 GGCTTAGGATGCTGACGAAATGGTTTCAAACCACCCGTCTTGAAACACGGACCAAGGAGTCCAACACATATGCGAGTCTTTGGGTGGCAAACCCACGGGC Rhizidium_phycophilum_KP_013 GGAATGAAAGTAAACGTAGGTGTGATCCGCAAGG-GCAACATCGACCGGACTGGATTTCTT-T-GAAAGTTC-GAGTACGAGCGCATTTGCAGAGACCCG Obelidium_mucronatum_JEL_057 GGAATGAAAGAAAACGTAGGTGTGATCCGCAAGG-GCAACATCGACCGGACTGGATTTCTT-T-GAAAGTTC-GAGTAAGAGCGCATTTGCAGAGACCCG Rhizoclosmatium_globosum_WJD_111 GAAATGAAAGTAAACGTAGGTGTGATCCGCAAGG-GCAACATCGACCGGACTGGATTTTCT-T-GAAAGTTCTGAGTAAGAGCGCATTTGCAGAGACCCG Chytriomyces_clade_WB_235A GAAATGAAAGTAAACGTAGGTGGGATCCGCAAGG-GCACCATCGACCGGTCTGGAGATTTA-TCAAAAGATC-GAGTAAGAGCATGTTTGTTGGGACCCG Chytriomyces_hyalinus_Barr_097 GTAATGAAAGTAAATGCAGGTGAGATCCTTCGGG-GCATCATCGACCGGTCTGGATTCTTT-T-GAAAGATC-GAGTAAGAGCATGTTTGTTGGGACCCG Asterophlyctis_sarcoptoides_JEL_186 GCAATGAAAGTAAATGCAGGTGTGATGCTCAAGCTGCAACATCGACCGGACTGGAGTTTTA-T-AAAAGTTCTGAGTAGGAGCGTGTTTGTTGGGACCCG Pseudorhizidium_endosporangiatum_JEL_221 GTAATGAAAGTGAATGTAGGAGGGACCCGCAAGG-GCACCTTCGACCGGTCTGGATTTTTT-T-GAAAGATC-GAGTAAGAGCATGATTGTTGGGACCCG Delfinachytrium_mesopotamicum_ARG_113 GTAATGAAAGTGAATGTAGGAGGGACCCGTAAGG-GCACCTTCGACCGGTCTGGATTTTTT-T-GAAAGATCTGAGTAAGAGCATGATTGTTGGGACCCG Dendrochytridium_crassum_JEL_353 GCAATGAAAGTGAAAGGGAACGAGCTTC----GG-GCAGTTCCGACCGGTCTGGATTTTTT-T-GATGGATC-GAGTGAGAGCACATGTGCTGGGACCCG Dendrochytridium_crassum_JEL_354 GCAATGAAAGTGAAAGGGAACGAGCTTC----GG-GCAGTTCCGACCGGTCTGGATTTTTT-T-GATGGATC-GAGTGAGAGCACATGTGCTGGGACCCG Irineochytrium_annulatum_JEL_729 GCAGTGAAAGCGAAAAGATACG---TT---------CAGTATCGACCGGTCTGGATTTTTTAT-GATGGATCTGAGTAAGAGCATATGTGCTGGGACCCG Chytridium_olla_ARG_100 GTAATGAAAGTGAAAGGGTACGAACTTT----GG-GCAGTACCGACCGGTCTGGATTTTTT-T-GATGGATC-GAGTATGAGCATATGTGCTGGGACCCG Phlyctochytrium_bullatum_ARG_112 GTAATGAAAGTGAAAGCCTGCGAACTTC----GG-GCAGCAGGGACCGGTCTGGATTTTTA-T-GATGGATCTGAGTATGAGCATATGTGCTGGGACCCG Phlyctochytrium_bullatum_JEL_754 GCAATGAAAGTGAAAGCCTGCCAACTTC----GG-GCAGCAGGGACCGGTCTGGATTTTTA-T-GATGGATCTGAGTATGAGCGTATGTGCTGGGACCCG Phlyctochytrium_planicorne_JEL_047 GCAATGAAAGTGAAAAGGTACGAACTTC----GG-GCAGTACCGACCGGTCTGGATTTTTT-T-GATGGATCTGAGTATGAGCACATTTGCTGGGACCCG Phlyctochytrium_planicorne_ARG_109 GCAATGAAAGTGAAAAGGTACGAACTTC----GG-GCAGTACCGACCGGTCTGGATTTTTT-T-GATGGATCTGAGTATGAGCACATTTGCTGGGACCCG Phlyctochytrium_planicorne_JEL_388 GCAATGAAAGTGAAAAGGTACGAACTTC----GGTGCAGTACCGACCGGTCTGGATTTTTT-T-GATGGATCTGAGTATGAGCACATTTGCTGGGACCCG Dinochytrium_kinnereticum_JEL_364 GCAATGAAAGTGAAAGGGTACGAACTTC----GGTGCAGTACCGACCGGTCTGGATTTTTA-T-GATGGATCTGAGTATGAGCACATGTGCTGGGACCCG Dinochytrium_kinnereticum_KLL_TL_060613_ GCAATGAAAGTGAAAGGGTACGAACTTC----GGTGCAGTACCGACCGGTCTGGATTTTTA-T-GATGGATCTGAGTATGAGCACATGTGCTGGGACCCG Chytridium_lagenaria_PL_167B GTAATGAAAGTGAAAGGGTACCAACTTC----GG-GCAGTACCGACCGGTCTGGATTTTTA-T-GATGGATC-GAGTATGAGCATATGTGCTGGGACCCG Chytridium_lagenaria_ARG_066 GTAATGAAAGTGAAAGGCTACGAACTTC----GG-GCAGTAGCGACCGGTCTGGATTTTTA-T-GATGGATC-GAGTATGAGCATATGTGCTGGGACCCG Phlyctochytrium_aureliae_KP_061 GCAATGAAAGTGAAAAGGTACGAACCTC----GG-GCAGTACCGACCGGTCCGGATTTTTT-T-GATGGATCTGAGTATGAGCATATGTGCTGGGACCCG Rhizidium_phycophilum_KP_013 AAAGATGGTGAACTATACCTGAGTAGGGTGAAGTCAGAGG Obelidium_mucronatum_JEL_057 AAAGATGGTGAACTATACCTGAGTAGGGTGAAGTCAGAGG Rhizoclosmatium_globosum_WJD_111 AAAGATGGTGAACTATACCTGAGTAGGGTGAAGTCAGAGG Chytriomyces_clade_WB_235A AAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGG Chytriomyces_hyalinus_Barr_097 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGG Asterophlyctis_sarcoptoides_JEL_186 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGG Pseudorhizidium_endosporangiatum_JEL_221 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG Delfinachytrium_mesopotamicum_ARG_113 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG Dendrochytridium_crassum_JEL_353 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Dendrochytridium_crassum_JEL_354 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Irineochytrium_annulatum_JEL_729 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Chytridium_olla_ARG_100 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Phlyctochytrium_bullatum_ARG_112 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Phlyctochytrium_bullatum_JEL_754 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Phlyctochytrium_planicorne_JEL_047 AAAGATGGTGAACTATGCCTGGATAGGGCGAAGCCAGAGG Phlyctochytrium_planicorne_ARG_109 AAAGATGGTGAACTATGCCTGGATAGGGCGAAGCCAGAGG Phlyctochytrium_planicorne_JEL_388 AAAGATGGTGAACTATGCCTGGATAGGGCGAAGCCAGAGG Dinochytrium_kinnereticum_JEL_364 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Dinochytrium_kinnereticum_KLL_TL_060613_ AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Chytridium_lagenaria_PL_167B AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Chytridium_lagenaria_ARG_066 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG Phlyctochytrium_aureliae_KP_061 AAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGG ; END; begin Paup; exclude Uninf Constant; outgroup KP013 JEL57 WJD111 WB235A Barr97 JEL186 JEL221 ARG113; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 840; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 840; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 840; END; BEGIN TREES; Title 'Trees from "IS28S150714.tre"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Rhizidium_phycophilum_KP_013, [1] 2 Obelidium_mucronatum_JEL_057, [2] 3 Rhizoclosmatium_globosum_WJD_111, [3] 4 Chytriomyces_clade_WB_235A, [4] 5 Chytriomyces_hyalinus_Barr_097, [5] 6 Asterophlyctis_sarcoptoides_JEL_186, [6] 7 Pseudorhizidium_endosporangiatum_JEL_221, [7] 8 Delfinachytrium_mesopotamicum_ARG_113, [8] 9 Dendrochytridium_crassum_JEL_353, [9] 10 Dendrochytridium_crassum_JEL_354, [10] 11 Irineochytrium_annulatum_JEL_729, [11] 12 Chytridium_olla_ARG_100, [12] 13 Phlyctochytrium_bullatum_ARG_112, [13] 14 Phlyctochytrium_bullatum_JEL_754, [14] 15 Phlyctochytrium_planicorne_JEL_047, [15] 16 Phlyctochytrium_planicorne_ARG_109, [16] 17 Phlyctochytrium_planicorne_JEL_388, [17] 18 Dinochytrium_kinnereticum_JEL_364, [18] 19 Dinochytrium_kinnereticum_KLL_TL_060613_, [19] 20 Chytridium_lagenaria_PL_167B, [20] 21 Chytridium_lagenaria_ARG_066, [21] 22 Phlyctochytrium_aureliae_KP_061; TREE PAUP_1 = ((((((1:100,2:100):72,3:100):100,(4:100,5:100):73):58,6:100):83,(7:100,8:100):100):0.0,(((9:100,10:100):50,11:100):50,((12:100,(((13:100,14:100):100,((15:100,17:100):95,16:100):100):44,((18:100,19:100):100,(20:100,21:100):100):17):33):43,22:100):95):141)[% ] [% ] [% setBetweenBits = selected ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1436888537818; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1103548472514583111; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2545896235406769066; mqVersion 302; checksumv 0 3 2201268463 null getNumChars 840 numChars 840 getNumTaxa 22 numTaxa 22 short true bits 15 states 15 sumSquaresStatesOnly 372584.0 sumSquares 372584.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1440 782; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1103548472514583111 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 888.1436887543067.118912067961375583; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1340 710; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2545896235406769066 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 228; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1340 710; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;