#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=30; TAXLABELS 'Antrodia favescens 0412_4J' 'Antrodia favescens 0309_103' 'Antrodia favescens Vlasak_0809' Antrodia_heteromorpha_X1841 Antrodia_heteromorpha_X1474 'Antrodia heteromorpha 0509_187' Antrodia_serpens_X1511 'Antrodia serpens Vlasak_8609.15' Antrodia_tanakai_X1779 Antrodia_tanakai_X1505 Antrodia_tanakai_X1504 'Antrodia subserpens Cui_8310' 'Antrodia subserpens Dai_6380' 'Antrodia subserpens Dai_13233' 'Antrodia heteromopna Yuan_2466' 'Antrodia heteromopna Yuan_826' 'Antrodia tanakai Cui_9275' 'Antrodia tanakai Dai_11782' 'Antrodia tanakai Cui_9758' 'Antrodia tanakai Yuan_1106' 'Antrodia tanakai Cui_6080' Antrodia_tanakai_11453 'Antrodia heteromorpha Dai_1275' 'Antrodia heteromorpha Dai_1274' 'Antrodia macra MUAF_887' Antrodia_mappa_4239 Antrodia_mappa_X1500 'Antrodia mappa Vlasak_0509.170' Antrodia_mappa_4132 'Antrodia serialis Cui_10519' ; END; BEGIN CHARACTERS; TITLE 'Antrodia ITS+Tef1'; DIMENSIONS NCHAR=1110; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Antrodia favescens 0412_4J' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACATTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGYTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTACAATCGTCCTCTA-CGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATTGCCGCCGGTACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGCCAGACTCGCGAGCACGCCCTGCTTGCCTTCACCCTGGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACTACCAAGGTTAGTGTGCGGTCTCCGAGCATATAACAGCGAATGAAACCCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTYAAGGAGACGTCCACCTTCATTAAGAARGTCGGATACAACCCGAAGGCGGTCGCGTTCGTGCCCATCTCTGGCTGGCACGGTGACAACATGTTGGARGAGTCCGCCAAGTGAGTACATTA-TGGCAGATGCCCCGCGTTCCACGCATTCTAACCYCT-TGCGCGCAATAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGGCGGTGTCCTCAAGGGTAAGACCCTCCTCGACGCCATCGATGCYATCGAGCCGCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia favescens 0309_103' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACATTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAAYGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTARCTGAGACGCATRA--ATGGGAT-CGGCTTACAATCGTCCTCTA-CGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATTGCCGCCGGTACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGCCAGACTCGCGAGCACGCCCTGCTTGCCTTCACCCTGGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACTACCAAGGTTAGTGTGCGGTCTCCGAGCATATAACAGCGAATGAAACCCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTCGGATACAACCCGAAGGCGGTCGCGTTCGTGCCCATCTCTGGCTGGCACGGTGACAACATGTTGGAAGAGTCCGCCAAGTGAGTACATTA-TGGCAGATGCCCCGCGTTCCACGCATTCTAACCCCT-TGCGCGCAATAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGGCGGTGTCCTCAAGGGTAAGACCCTCCTCGACGCCATCGATGCCATCGAGCCGCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia favescens Vlasak_0809' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAAMATTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAAYGCAG-TTGGATTTGGAGGCYATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATRA--ATGGGAT-CGGCTTACAATCGTCCTYTA-CGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATTGCCGCCGGTACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGCCAGACTCGCGAGCACGCCCTGCTTGCCTTCACCCTGGGCGTCAGGCAGCTCATCGTTGCYATCAACAAGATGGATACTACCAAGGTTAGTGTGYGGTCTCCGAGCATATAACAGCGAATGAAACCCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTCGGATACAACCCGAAGGCGGTCGCGTTCGTGCCCATCTCTGGCTGGCACGGTGACAACATGTTGGAAGAGTCCGCCAAGTGAGTACATTA-TGGCAGATGCCCCGCGTTCCACGCATTCTAACCCCT-TGCGCGCAATAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGGCGGTGTCCTCAAGGGTAAGACCCTCCTCGACGCCATCGATGCCATCGAGCCGCCAGTCCGTCCCTCCGACAAGCCCCTSCGTCTCCCCCTGCAGGATGTCTACAAGA Antrodia_heteromorpha_X1841 TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATTCTTAACGGGGTTTGTTT--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACACATGA--ATGGGAT-CGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATTGCCGCTGGCACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCTACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCACCAAGTGAGTATAG--GTGACAGGTGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAAACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTTCCCCTGCAGGATGTCTACAAGA Antrodia_heteromorpha_X1474 TGTAGCTGGCCTTTCAAAGGGCRTGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATYCTTAACGGGGTTTGTTT--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACRCATGA--ATGGGAT-YGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTA-----------------CGCTGGCACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCTACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCACCAAGTGAGTATAG--GTGACAGGTGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAAACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTTCCCCTGCAGGATGTCTACAAGA 'Antrodia heteromorpha 0509_187' TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATCCTTAACGGGGTTTGTTT--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-TGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATTGCCGCTGGCACCGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCACCAAGTGAGTATAATGGTGACAGATGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAAACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTTCCCCTGCAGGATGTCTACAAGA Antrodia_serpens_X1511 TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGCACACTTTGTAGGTCGGCTCAAGGGACAGATTCTTAACGGGATTTGTTT--CCAGTCTTCCTATGTTTTATTATAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTGTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAAYCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGATGCATGA--ATGGGAT-CGGCTTACAATCGTCCTTGAA-GGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTGTCCTCATCATCGCCGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGATGGTCAGACTCGCGAGCACGCCCTCCTTGCCTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTCTGGAT--TTCAAGCATATGATAGTAACGTCACATTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTCGGATACAACCCGAAGACGGTCGCCTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACGGTA--------GCCTCCGCGATCCACGCATTCTGACACCT-TGCGCGCATCAGCATGCCATGGTACAAGGGCTGGACGAGGGAAACCAAGGGCGGTGTCGTTAAGGGCAAGACCCTGCTTGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTTCGTCTTCCCCTCCAGGATGTCTACAAGA 'Antrodia serpens Vlasak_8609.15' TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGCACACTTTGTAGGTCGGCTCAAGGGACAGATTCTTAACGGGATTTGTTT--CCAGTCTTCCTATGTTTTATTATAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGYATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTGTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAAYCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGATGCATGA--ATGGGAT-CGGCTTACAATCGTCCTTGAA-GGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Antrodia_tanakai_X1779 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCRGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACTAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCAYTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA Antrodia_tanakai_X1505 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCRGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAAYTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACTAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAARCCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCTATCTCCGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGTCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA Antrodia_tanakai_X1504 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTYACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCYATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCRGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCYCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACYAAGGTTAGCGCGCGGTCTCCAACTMCATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGAYCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGYCMCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGYTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia subserpens Cui_8310' TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGCACACTTTGTAGGTCGGCTCAAGGGACAGATTCTTGACGGGATTTGTTT--CGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTTCAAAGAATGTAGTC-GCGTTTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTGTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CAGCTTACAATCGTCTTTGAACGGACAATCTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATCGCCGCCGGCACCGGTGAGTTCGAGGCCGGTATCTCCAAGGATGGTCAGACTCGCGAGCACGCCCTGCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGACACTACTAAGGTGAGTATGCGGATTTCAAGCTTATGACAGCAACTTAACGTTGCATTCAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGACGGTCGCCTTTGTCCCGATCTCTGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACGATAGCGGTAGATTCTCCGCGATCCACGCATTCTGATCACT-TGCGCGCCCCAGCATGACATGGTACAAGGGCTGGACGAAGGAAAACAAGAGCGGTGTCGTTAAGGGCAAGACCCTGCTTGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCAGACAAGCCCCTCCGCCTTCCTCTCCAGGATGTCTACAAGA 'Antrodia subserpens Dai_6380' TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGCACACTTTGTAGGTCGGCTCAAGGGACAGATTCTTGACGGGATTTGTTT--CGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTTCAAAGAATGTAGTC-GCGTTTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTGTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GYCGGATTGTAATGAYTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CAGCTTACAATCGTCTTTGAATGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATCGCCGCCGGCACCGGTGAGTTCGAGGCCGGTATCTCCAAGGATGGTCAGACTCGCGAGCACGCCCTGCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGACACTACTAAGGTGAGTATGCGGATTTCAAGCTTATGACAGCAACTTAACGTTGCATTCAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGACGGTCGCCTTTGTCCCGATCTCTGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACGATAGCGGTAGATTCTCCGCGATCCACGCATTCTGATCACT-TGCGCGCCCCAGCATGACATGGTACAAGGGCTGGACGAAGGAAAACAAGAGCGGTGTCGTTAAGGGCAAGACCCTGCTTGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCAGACAAGCCCCTCCGCCTTCCTCTCCAGGATGTCTACAAGA 'Antrodia subserpens Dai_13233' TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGCACACTTTGTAGGTCGGCTCAAGGGACAGATTCTTGACGGGATTTGTTT--CGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTTCAAAGAATGTAGTC-GCGTTTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTGTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CAGCTTACAATCGTCTTTGAATGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATCGCCGCCGGCACCGGTGAGTTCGAGGCCGGTATCTCCAAGGATGGTCAGACTCGCGAGCACGCCCTGCTTGCGTTCACCCTCGGTGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGACACTACTAAGGTGAGTATGCGGATTTCAAGCTTATGACAGCAACTTAACGTTGCATTCAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGACGGTCGCCTTTGTCCCGATCTCTGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACGATAGCGGTAGATTCTCCGCGATCCACGCATTCTGATCACT-TGCGCGCCCCAGCATGACATGGTACAAGGGCTGGACGAAGGAAAACAAGAGCGGTGTCGTTAAGGGCAAGACCCTGCTTGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCAGACAAGCCCCTCCGCCTTCCTCTCCAGGATGTCTACAAGA 'Antrodia heteromopna Yuan_2466' TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCTTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATTCTTAACGGGGTTTGTTC--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATTGCCGCTGGCACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACATCCACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCGCCAAGTGAGTATAGTGGTGACAGGTGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAGACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTGCCCCTGCAGGATGTCTACAAGA 'Antrodia heteromopna Yuan_826' TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCTTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATTCTTAACGGGGTTTGTTC--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATTGCCGCTGGCACTGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACATCCACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCGCCAAGTGAGTATAGTGGTGACAGGTGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAGACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTGCCCCTGCAGGATGTCTACAAGA 'Antrodia tanakai Cui_9275' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCAGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACCAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTATAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGTCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGAGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia tanakai Dai_11782' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTRGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCAGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACTAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTTCCCCTGCAGGATGTCTACAAGA 'Antrodia tanakai Cui_9758' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAC-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACCAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGATCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia tanakai Yuan_1106' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACTAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGCTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia tanakai Cui_6080' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATATAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGGCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACCAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGTGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGTTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA Antrodia_tanakai_11453 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTCTAACGGGGCTTGTTT--CGGGCCTTCCTATGTATTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTCGTTTGTCTTTGTATGAACGCAG-TTGGATTTGGAGGCTATT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTATAATCGTCCTCTAACGGACAATTTA--CTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATCATCGCTGCCGGCACTGGTGAGTTCGAAGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTCCTTGCGTTCACCCTCGGTGTCAGGCAGCTTATCGTTGCCATCAACAAGATGGACACCACCAAGGTTAGCGCGCGGTCTCCAACTACATGACAGCATTCTAAACCTGCATACAGTGGAGCGAGGACCGTTTCAACGAAATCGTCAAGGAGACGTCCACCTTCATTAAGAAGGTTGGATACAACCCGAAGGCGGTTGCGTTCGTCCCCATCTCCGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTGAGTACAGTTGTGACAGATGCCCCGTGATCCGCGCATTCTAAGCCCT-TGCGCGTAACAGCATGCCATGGTACAAGGGTTGGTCGAGGGAGACCAAGGCTGGTGTTGTCAAGGGCAAGACCCTCCTCGACGCCATCGACGCCATCGAGCCCCCAGTCCGTCCGTCCGACAAGCCCCTCCGTCTCCCCCTGCAGGATGTCTACAAGA 'Antrodia heteromorpha Dai_1275' TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATTCTTAACGGGGTTTGTTT--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-TGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTAGCTATCCTCATTATTGCCGCTGGCACCGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCCCTTCTTGCGTTCACCCTCGGCGTCAGGCAGCTCATCGTTGCCATCAACAAGATGGATACCACTAAGGTGAGTGTGTGGACTTCAAGTACATCACAGCAACTTAACCTCGCATACAGTGGAGCGAGGACCGTTTCAACGAAATTGTCAAGGAGACGTCCACCTTCATAAAGAAGGTTGGATACAACCCGAAGACGGTCGCGTTCGTCCCGATCTCTGGCTGGCACGGTGACAACATGTTGGAGGAATCCACCAAGTGAGTATAATGGTGACAGATGCTCCATGATCCATGTATTCTGACCACT-AGCGCGCACCAGCATGACATGGTACAAGGGCTGGACGAGGGAGACCAAGGCCGGTGTCGTTAAGGGCAAAACCCTCCTCGATGCCATCGACGCCATCGAGCCCCCAGTCCGTCCCTCCGACAAGCCCCTCCGTCTTCCCCTGCAGGATGTCTACAAGA 'Antrodia heteromorpha Dai_1274' TGTAGCTGGCCTTTCAAAGGGCATGTGCACGCCTCGCT--TCAATCCACTTACCCCTGTGAACACTCTGTAGGTCGGCTCAAGGGACAAATCCTTAACGGGGTTTGTTT--TGGGCCTTCCTATGTTTTATTACAAACGTTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTATCAACTTGTTTATCTTTGTATGAACGCAG-TTGGATTTGGAGGCCATT---GCCGGATTGTAATGACTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-TGGCTTACAGTCGTCCTTGAACGGACAATTTA--TTATGACTTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Antrodia macra MUAF_887' TGTAGCTGGCCTTTCAACGGGCATGTGCACGCCTCTCT--TCAATCCATTTACACCTGTGCACACTTTGTAGGTCGGCTTTAGGAACGGGTCTTTAACGGGACCTGTTT--CGGGCCTTCCTATGTATTATTACAAACACTTAAAGTCTAAAGAATGTACTC-GCGTCTAACGCATT-ATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAATTCGTTTGTCTTCGTATGAACGCAG-TTGGATTTGGAGGCTGTT---GCCGGATTGTAATGATTCGGCTCCTCTTGAATGCATTAGCTCGAACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGAGACGCATGA--ATGGGAT-CGGCTTACAGTCGTCCGTGTACGGACAATTTA--TTATGACCTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Antrodia_mappa_4239 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTCACCACTGTGCACAATTTGTAGGTCGGCTTTAGGATCGGGTCTCTAGCGGGATCTGTTT--CGGGCCGTCCTATGTATCATTACAAACATTTAAAGTCTAAAGAATGTACTC-GCGTTAAACGCATTTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCGCCAATCTTTGCATTGGCGCTG-TTGGACTTGGAGGCTTTTTTTGCCGGATTGTAATGATTCGGCTCCTCTTGAATGTATTAGCTCGGACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGTGATGCATGA--GTAGGAT-CGGCTTACAATTGTCTTTAAACGGACAATAAAACTTATGACCTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Antrodia_mappa_X1500 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTCACCACTGTGCACAATTTGTAGGTCGGCTTTAGGATCGGGTCTCTAGCGGGATCTGTTT--CGGGCCGTCCTATGTATCATTACAAACATTTAAAGTCTAAAGAATGTACTC-GCGTTAAACGCATTTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCGCCAATCTTTGCATTGGCGCTG-TTGGACTTGGAGGCTTTTTTTGCCGGATTGTAATGATTCGGCTCCTCTTGAATGTATTAGCTCGGACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGTGATGCATGA--GTAGGAT-CGGCTTACAATTGTCTTTAAACGGACAATAAAACTTATGACCTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Antrodia mappa Vlasak_0509.170' TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTCACCACTGTGCACAATTTGTAGGTCGGCTTTAGGATCGGGTCTCTAGCGGGATCTGTTT--CGGGCCKTCCTATGTATCATTACAAACATTTAAAGTCTAAAGAATGTACTC-GCGTTAAACGCATTTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCGCCAATCTTTGCATTGGCGYTG-TTGGACTTGGAGGCTTTTTT-GCCGGATTGTAATGATTCGGCTCCTCTTGAATGTATTAGCTCGGACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGTGATGCATGA--GTAGGAT-CGGCTTACAATCGTCTTTAAACGGACAATRAAACTTATGACCTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Antrodia_mappa_4132 TGTAGCTGGCCTTTCAACGGGCATGTGCACACCTCGCT--TCAATCCACTCACCACTGTGCACAATTTGTAGGTCGGCTTTAGGATCGGGTCTCTAGCGGGATCTGTTT--CGGGCCGTCCTATGTATCATTACAAACATTTAAAGTCTAYAGAATGTACTC-GCGTTAAACGCATTTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTCGCCAATCTTTGCATTGGCGCTG-TTGGACTTGGAGGCTTTTTT-GCCGGATTGTAATGATTCGGCTCCTCTTGAATGTATTAGCTCGGACCTTTGCGGATCAGCTTTTGGTGTGATAATTGTCTACGCCGCTAACTGTGATGCATGA--GTAGGAT-CGGCTTACAATCGTCTTTAAACGGACAATAAAACTTATGACCTCTGACCTCAAATCAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Antrodia serialis Cui_10519' TGTAGCTGGCC----GGAAGGCATGTGCACGCCTCGATCATCATCCATCTCACACCTGTGCACACACTGTAGGTCGGTTTGTGGGGCGAGGTCTTCATTGAYTTTGCTTTGCGGGCCTTCCTATGTTTTATCACAAACTACTA--GTTYAAAGAATGTCTACTGCGTGTAACGCATTTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACTTCATTTGCTTT-TGTGAATGAAGCTTGGACTTGGAGG-TATT---GCTGG-CCGTACGG--TCGGCTCCTCTTGAATTTATTAGCTCGAACCTTTGTGGATCAGCTT-CGGTGTGATAATTGTCTACGCCGTT--CTGTGAAGCATAACTATGGGTTTCGGCTTCCAACAGTCCTTCACTGGACAATATC---TTTGACCTTTGACCTCAAATCAGGTAGCTGTCCTCATCATTGCCGCCGGTACCGGTGAGTTCGAGGCCGGTATCTCCAAGGACGGTCAGACTCGCGAGCACGCTCTCCTTGCCTTCACGCTCGGTGTGAGGCAGCTCATCGTTGCCATCAACAAGATGGACACCACCAAGGTGCGCTTTTATCGTAATCGCTGAGAATTTT-GCTCATCGTCGC-TACAGTGGAGCGAGGACCGCTTCAACGAAATTGTCAAGGAGACGTCCACCTTCATCAAGAAGGTCGGCTACAACCCGAAGGCGGTTGCCTTCGTGCCCATCTCTGGCTGGCACGGCGACAACATGTTGGAGGAGTCCGCCAAGTACGTATCGTCAGCGTTATTGCACGCTTGTTTACTGACTATATGCGCCTCGTG-----TAGCATGACATGGTACAAGGGTTGGTCCAGGGAGACTAAGGCTGGCGTCGTCAAGGGCAAGACCCTCCTCGATGCTATTGACGCCATTGAGCCCCCCGTCCGTCCCTCCGACAAGCCCCTCCGTCTGCCCCTCCAGGATGTCTACAAGA ; END; BEGIN PAUP; log file = ITS1_P_buffer.txt; pset collapse = minbrlen; set maxtrees = 5000 increase = no; outgroup Antrodia_serialis_Cui_10519; set criterion = parsimony; hsearch addseq = random nreps = 100; roottrees outroot = monophyl; savetrees brlens = yes file = MP.tre; pscores ALL / ci = yes tl = yes hi = yes rc = yes ri = yes khtest = yes; bootstrap nreps = 100 Keepall = yes / AddSeq = random nreps = 10; roottrees outroot = monophyl; savetrees file = BT.tre from = 1 to = 1 savebootp = both maxdec = 0; END; BEGIN TREES; Title 'Antrodia ITS+Tef1'; LINK Taxa = Taxa; TRANSLATE [0] 1 'Antrodia favescens 0412_4J', [1] 2 'Antrodia favescens 0309_103', [2] 3 'Antrodia favescens Vlasak_0809', [3] 4 Antrodia_heteromorpha_X1841, [4] 5 Antrodia_heteromorpha_X1474, [5] 6 'Antrodia heteromorpha 0509_187', [6] 7 Antrodia_serpens_X1511, [7] 8 'Antrodia serpens Vlasak_8609.15', [8] 9 Antrodia_tanakai_X1779, [9] 10 Antrodia_tanakai_X1505, [10] 11 Antrodia_tanakai_X1504, [11] 12 'Antrodia subserpens Cui_8310', [12] 13 'Antrodia subserpens Dai_6380', [13] 14 'Antrodia subserpens Dai_13233', [14] 15 'Antrodia heteromopna Yuan_2466', [15] 16 'Antrodia heteromopna Yuan_826', [16] 17 'Antrodia tanakai Cui_9275', [17] 18 'Antrodia tanakai Dai_11782', [18] 19 'Antrodia tanakai Cui_9758', [19] 20 'Antrodia tanakai Yuan_1106', [20] 21 'Antrodia tanakai Cui_6080', [21] 22 Antrodia_tanakai_11453, [22] 23 'Antrodia heteromorpha Dai_1275', [23] 24 'Antrodia heteromorpha Dai_1274', [24] 25 'Antrodia macra MUAF_887', [25] 26 Antrodia_mappa_4239, [26] 27 Antrodia_mappa_X1500, [27] 28 'Antrodia mappa Vlasak_0509.170', [28] 29 Antrodia_mappa_4132, [29] 30 'Antrodia serialis Cui_10519'; TREE MajRule = (30:75.66964285714286[%consensusFrequency = 1 ],((28:0.0,29:1,(26:0.0,27:0.0):0.5[%consensusFrequency = 1 ]):23.607142857142858[%consensusFrequency = 1 ],(25:10.392857142857142,((1:0.0,2:0.0,3:0.0):9.732142857142858[%consensusFrequency = 1 ],((9:0.0,11:0.0,18:2.142857142857143,19:2.267857142857143,20:0.17857142857142858,(10:2,17:3):1.1428571428571428[%consensusFrequency = 1 ],(21:2.1964285714285716,22:2.1964285714285716):1.21875[%consensusFrequency = 0.57142857 ]):14.388392857142858[%consensusFrequency = 1 ],(((7:0.0,8:0.0):12[%consensusFrequency = 1 ],(12:1,(13:0.0,14:1):2[%consensusFrequency = 1 ]):27[%consensusFrequency = 1 ]):19.696428571428573[%consensusFrequency = 1 ],((15:0.0,16:0.0):4[%consensusFrequency = 1 ],((4:0.0,5:0.0):1[%consensusFrequency = 1 ],(23:1,(6:0.0,24:0.0):0.5[%consensusFrequency = 1 ]):4[%consensusFrequency = 1 ]):1.5[%consensusFrequency = 1 ]):11.151785714285714[%consensusFrequency = 1 ]):28.5[%consensusFrequency = 1 ]):12.615384615384615[%consensusFrequency = 0.69642857 ]):2.8482142857142856[%consensusFrequency = 1 ]):4.5[%consensusFrequency = 1 ]):75.66964285714286):0.0[%consensusFrequency = 1 ] [% ] [% setBetweenDouble = consensusFrequency ]; END;