#NEXUS [written Tue Mar 11 10:33:34 ART 2014 by Mesquite version 2.74 (build 550) at RamirezD/168.96.62.80 (Martin J. Ramirez)] BEGIN AUTHORS; AUTHOR NAME = Martin_J._Ramirez CODE = MR LASTSAVER; END; BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=52; TAXLABELS Homalonychus Penestomus Cyrioctea Lachesana Lutica Antillorena Leprolochus Asceua Asteron Cybaeodamus Forsterella Habronestes Hermippus Hetaerica Ishania Mallinella Neostorena Nostera Platnickia Selamia Storamia Storena Storosa Tenedos Chariobas Cicynethus Madrela Storenomorpha Thaumastochilus Aschema Caesetius Capheris Cydrela Cryptothele Psammoduon Psammorygma Acanthinozodium Akyttara Diores Dusmadiores Heradida Mallinus Mastidiores Microdiores Palaestina Palfuria Ranops Suffasia Trygetus Zodarion Rotundrela Procydrela ; IDS MR144b1584bdb265 MR144b1584bdb266 MR144b1584bdb267 MR144b1584bdb268 MR144b1584bdb269 MR144b1584bdb270 MR144b1584bdb271 MR144b1584bdb272 MR144b1584bdb273 MR144b1584bdb274 MR144b1584bdb275 MR144b1584bdb276 MR144b1584bdb277 MR144b1584bdb278 MR144b1584bdb279 MR144b1584bdb280 MR144b1584bdb281 MR144b1584bdb282 MR144b1584bdb283 MR144b1584bdb284 MR144b1584bdb285 MR144b1584bdb286 MR144b1584bdb287 MR144b1584bdb288 MR144b1584bdb289 MR144b1584bdb290 MR144b1584bdb291 MR144b1584bdb292 MR144b1584bdb293 MR144b1584bdb294 MR144b1584bdb295 MR144b1584bdb296 MR144b1584bdb297 MR144b1584bdc298 MR144b1584bdc299 MR144b1584bdc300 MR144b1584bdc301 MR144b1584bdc302 MR144b1584bdc303 MR144b1584bdc304 MR144b1584bdc305 MR144b1584bdc306 MR144b1584bdc307 MR144b1584bdc308 MR144b1584bdc309 MR144b1584bdc310 MR144b1584bdc311 MR144b1584bdc312 MR144b1584bdc313 MR144b1584bdc314 MR144b1584bdc315 MR144b1584bdc316 ; BLOCKID MR144b1584bdb5; END; BEGIN CHARACTERS; TITLE Character_Matrix; [!Cryptothele added to Jocque 1991 zodariid matrix] DIMENSIONS NCHAR=82; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5"; MATRIX Homalonychus 000-000301000000002000000120000010000312000000000000010000001000000111000000000011 Penestomus 000(0 1)00030000000000?000020000000?00000000000000000000000000000020000?1000000000010(1 2) Cyrioctea 0100000000000000000000000000000000000000000000000000000000000000000000000000000012 Lachesana 000101100100010000000000000000000000000100000000000000000000000110000000000000001? Lutica 000101000200010000000000000000000000000000000000000000000000000000000000000000001? Antillorena 0001010101000100000000010000000000000000000000000000000000000001110000000000000012 Leprolochus 001110010210000110100002002000000000000100000000000000000000102110000000000000001? Asceua 000100011210000110211101100000000000020000000000000000000000013110010000000000001? Asteron 000100011210000110110111000000000000000000000000000000000000113110011000000000011? Cybaeodamus 0001000001100000000000000000000000000000000000000000000000001001100000100000000012 Forsterella 000100011210000110121001000000000000000000000000000000000000110110010010000000011? Habronestes 0001000112100001101010010000000000000000000000000000000000001131100100000100000112 Hermippus 0001000102100001101210010020000000001000000000000000010000001150100100000000000112 Hetaerica 00010001011000011010100100000000000000000000000000000000000001???00100000000000?1? Ishania 000100011210000010100000000000000000000000000000000000000000110110010001001000011? Mallinella 0001000112100001101211010000000000001000000000000000000000001100100100000000000011 Neostorena 000100011210000110121101000000000100000000000000000000000000110110010000100000001? Nostera 000100010110000110101001000000000000000000000000000000000000010000010000000100011? Platnickia 0001000011100001101000010000000000000002000000000000000000100?00000100000000000112 Selamia 000100010100000010111001000000000000000000000000000000000000010010000100000010001? Storamia 000100010110000110221101000000000000000000000000000000000000113010010000000000011? Storena 000100010110000110111100000000000000000000000000000000000001113010010000000000011? Storosa 000100011110000110111001000000000000000000000000000000000000013010010000000001011? Tenedos 000100010210000010100001000000000000000000000000000000000000113010010000000000101(1 2) Chariobas 000100001201110100100002001000000000030200000000000110001000010000010000000000001? Cicynethus 0001000102011101001000020000000000000302000000000000001001000100000100000000000012 Madrela 000100011201110100100000001000000000010200000000000001010000010010000000000000001? Storenomorpha 0001000112011101001000010000000000000302000000000000001000000031100100000000000012 Thaumastochilus 00010001120111010010000200000000000003030000000000010000100001???0010000000000001? Aschema 000101000200011100101000000000000000000000001000000000000000112010010000000000001? Caesetius 000100030210010100101021002000000000000100000100000000000000010000000000000000011? Capheris 000100000210011100111041000000000000000001111000000000000000103000010000000000001? Cydrela 000100030210011100101000000000000000000000000000000000000000010001010000000000001(1 2) Cryptothele 00010(0 1)000200011100?01000000000000001020300010000000000?000000001100101110000000011 Psammoduon 000100030210010100101000002000000000000100000111100000000000113000000000000000011? Psammorygma 000100000210011100111030000000000000000100000000011000000000100011010000000000011? Acanthinozodium 000100021210000102231102100000100000110000000000000000000000012110110000000000001? Akyttara 000100021210000103231100000000101110020000000000000000000000110010110000000000001? Diores 0001000112100001022311001120001000000100000000000000000000000121111100000000000012 Dusmadiores 000100021210000104231100100001100000020000000000000000000000112010110000000000001? Heradida 000100021210000105231100000000100101020000000000000000000000013010010000000000001? Mallinus 00010002121000010223110010200011000012000000000000000000000011???01100000000000?1? Mastidiores 000100021210000104231100101001100000020000000000000000000000112110110000000000001? Microdiores 000100021210000102131100100000100000020000000000000000000000112010110000000000011? Palaestina 000100001210000102231100100010100011020000000000000000000000013000110000000000001? Palfuria 000100021210000102231103100000100000020010000000000000000000010010110000000000001? Ranops 000100021210000102231102200000110000021100000000000000000000010000110000000000001? Suffasia 00010001111000011122110110000000000000000000000000000000000011???0100000000000001? Trygetus 000100021210010102231100100100100011020000000000000000000000110110010000000000001? Zodarion 0001000212100001022311022000001100001200000000000000000000000100101100000000000011 Rotundrela -0010000?211010000110022??0000000000000(0 1)000000?0?00000?000001?001?0100000000?0001? Procydrela -00100010101000000120002??0000000000000(0 1)000010?0?00000?001000?000?0000000011?0011? ; IDS MR144b1584bdc691 MR144b1584bdc692 MR144b1584bdc693 MR144b1584bdc694 MR144b1584bdc695 MR144b1584bdc696 MR144b1584bdc697 MR144b1584bdc698 MR144b1584bdc699 MR144b1584bdc700 MR144b1584bdc701 MR144b1584bdc702 MR144b1584bdc703 MR144b1584bdc704 MR144b1584bdc705 MR144b1584bdc706 MR144b1584bdc707 MR144b1584bdc708 MR144b1584bdc709 MR144b1584bdc710 MR144b1584bdc711 MR144b1584bdc712 MR144b1584bdc713 MR144b1584bdc714 MR144b1584bdc715 MR144b1584bdc716 MR144b1584bdc717 MR144b1584bdc718 MR144b1584bdc719 MR144b1584bdc720 MR144b1584bdc721 MR144b1584bdc722 MR144b1584bdc723 MR144b1584bdc724 MR144b1584bdc725 MR144b1584bdc726 MR144b1584bdc727 MR144b1584bdc728 MR144b1584bdc729 MR144b1584bdc730 MR144b1584bdc731 MR144b1584bdc732 MR144b1584bdc733 MR144b1584bdc734 MR144b1584bdc735 MR144b1584bdc736 MR144b1584bdc737 MR144b1584bdc738 MR144b1584bdc739 MR144b1584bdc740 MR144b1584bdc741 MR144b1584bdc742 MR144b1584bdc743 MR144b1584bdc744 MR144b1584bdc745 MR144b1584bdc746 MR144b1584bdc747 MR144b1584bdc748 MR144b1584bdc749 MR144b1584bdc750 MR144b1584bdc751 MR144b1584bdc752 MR144b1584bdc753 MR144b1584bdc754 MR144b1584bdc755 MR144b1584bdc756 MR144b1584bdc757 MR144b1584bdc758 MR144b1584bdc759 MR144b1584bdc760 MR144b1584bdc761 MR144b1584bdc762 MR144b1584bdc763 MR144b1584bdc764 MR144b1584bdc765 MR144b1584bdc766 MR144b1584bdc767 MR144b1584bdc768 MR144b1584bdc769 MR144b1584bdc770 MR144b1584bdc771 MR144b1584bdc772 ; BLOCKID MR144b1584bdb0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 82; END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; [!tree(s) from TNT, for data in I:\data\Projects\Zodariidae\Cryptothele\clad\Cryptothele.tnt] TRANSLATE 1 Homalonychus, 2 Penestomus, 3 Cyrioctea, 4 Lachesana, 5 Lutica, 6 Antillorena, 7 Leprolochus, 8 Asceua, 9 Asteron, 10 Cybaeodamus, 11 Forsterella, 12 Habronestes, 13 Hermippus, 14 Hetaerica, 15 Ishania, 16 Mallinella, 17 Neostorena, 18 Nostera, 19 Platnickia, 20 Selamia, 21 Storamia, 22 Storena, 23 Storosa, 24 Tenedos, 25 Chariobas, 26 Cicynethus, 27 Madrela, 28 Storenomorpha, 29 Thaumastochilus, 30 Aschema, 31 Caesetius, 32 Capheris, 33 Cydrela, 34 Cryptothele, 35 Psammoduon, 36 Psammorygma, 37 Acanthinozodium, 38 Akyttara, 39 Diores, 40 Dusmadiores, 41 Heradida, 42 Mallinus, 43 Mastidiores, 44 Microdiores, 45 Palaestina, 46 Palfuria, 47 Ranops, 48 Suffasia, 49 Trygetus, 50 Zodarion, 51 Rotundrela, 52 Procydrela; TREE Imported_tree_1 = (1,(2,(3,10,(4,5,6),((20,(15,24,(7,19,(11,12,23,(13,(((9,(16,17,(8,(48,(39,(44,45,46,49,(37,(42,(47,50))),(38,41),(40,43))))))),(21,22)),((14,18),((30,(32,34),(33,36)),(31,35))))))))),(52,(51,(27,(25,29),(26,28)))))))); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 82; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1394544814353; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1446399767307955707 MR144b1584bdb5; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6987863887284103648 MR144b1584bdb0; mqVersion 274; checksumv 0 2 3323456567 MR144b1584bdb0 getNumChars 82 numChars 82 getNumTaxa 52 numTaxa 52 short true bits 63 states 63 sumSquaresStatesOnly 13847.0 sumSquares 13847.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1083 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1446399767307955707 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1493.1394544784269.8617151051904129812; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 983 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;