#NEXUS [written Fri Apr 15 14:10:00 CEST 2011 by Mesquite version 2.74 (build 550) at Filip-Lenovo/147.231.253.239] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=50; TAXLABELS Buchnera_aphidicola_str._Sg Buchnera_aphidicola_str._APS Riesia_pediculicola Wigglesworthia_glossinidia Blochmannia_floridanus Blochmannia_pennsylvanicus Ishikawaella_capsulata Baumannia_cicadellinicola Sodalis_glossinidius Pectobacterium_carotovorum Pectobacterium_atrosepticum Pectobacterium_wasabiae Dickeya_dadantii_Ech703 Dickeya_dadantii_Ech586 Dickeya_zeae Serratia_proteamaculans Yersinia_pestis Hamiltonella_defensa Regiella_insecticola Edwardsiella_tarda Edwardsiella_ictaluri Haemophilus_influenzae Pasteurella_multocida Vibrio_cholerae Xanthomonas_axonopodis Pseudomonas_aeruginosa Xenorhabdus_bovienii Xenorhabdus_nematophila Photorhabdus_asymbiotica Photorhabdus_luminescens Proteus_mirabilis Arsenophonus_nasoniae Pantoea_ananatis Erwinia_billingiae Erwinia_tasmaniensis Erwinia_pyrifoliae Erwinia_amylovora_ATCC_49946 Erwinia_amylovora_CFBP1430 Cronobacter_turicensis Cronobacter_sakazakii Klebsiella_variicola Klebsiella_pneumoniae Enterobacter_sp._638 Enterobacter_cloacae Escherichia_coli Citrobacter_rodentium Salmonella_enterica Citrobacter_koseri Buchnera_aphidicola_str._Cc Buchnera_aphidicola_str._Bp ; END; BEGIN TREES; Title 'Trees from "69_genes_AA_LG_PhyML.nex"'; LINK Taxa = Taxa; TRANSLATE 1 Buchnera_aphidicola_str._Sg, 2 Buchnera_aphidicola_str._APS, 3 Riesia_pediculicola, 4 Wigglesworthia_glossinidia, 5 Blochmannia_floridanus, 6 Blochmannia_pennsylvanicus, 7 Ishikawaella_capsulata, 8 Baumannia_cicadellinicola, 9 Sodalis_glossinidius, 10 Pectobacterium_carotovorum, 11 Pectobacterium_atrosepticum, 12 Pectobacterium_wasabiae, 13 Dickeya_dadantii_Ech703, 14 Dickeya_dadantii_Ech586, 15 Dickeya_zeae, 16 Serratia_proteamaculans, 17 Yersinia_pestis, 18 Hamiltonella_defensa, 19 Regiella_insecticola, 20 Edwardsiella_tarda, 21 Edwardsiella_ictaluri, 22 Haemophilus_influenzae, 23 Pasteurella_multocida, 24 Vibrio_cholerae, 25 Xanthomonas_axonopodis, 26 Pseudomonas_aeruginosa, 27 Xenorhabdus_bovienii, 28 Xenorhabdus_nematophila, 29 Photorhabdus_asymbiotica, 30 Photorhabdus_luminescens, 31 Proteus_mirabilis, 32 Arsenophonus_nasoniae, 33 Pantoea_ananatis, 34 Erwinia_billingiae, 35 Erwinia_tasmaniensis, 36 Erwinia_pyrifoliae, 37 Erwinia_amylovora_ATCC_49946, 38 Erwinia_amylovora_CFBP1430, 39 Cronobacter_turicensis, 40 Cronobacter_sakazakii, 41 Klebsiella_variicola, 42 Klebsiella_pneumoniae, 43 Enterobacter_sp._638, 44 Enterobacter_cloacae, 45 Escherichia_coli, 46 Citrobacter_rodentium, 47 Salmonella_enterica, 48 Citrobacter_koseri, 49 Buchnera_aphidicola_str._Cc, 50 Buchnera_aphidicola_str._Bp; TREE 'PHYLIP 1+' = (25:0.8658,(26:0.416365,(24:0.244894,((22:0.121781,23:0.0747):0.216411,((((27:0.03655,28:0.033061):0.04141,(29:0.030265,30:0.024078):0.038036):0.019835,(31:0.114786,32:0.151072):0.025635):0.043417,((20:0.006905,21:0.010754):0.105285,((16:0.057841,(17:0.048491,(18:0.332844,19:0.233783):0.06156):0.023535):0.029634,(((10:0.009409,(11:0.014791,12:0.012721):0.009943):0.049027,(13:0.046408,(14:0.014408,15:0.01485):0.023751):0.035037):0.024451,(((33:0.06486,(34:0.044017,(35:0.013837,(36:0.012986,(37:1.0E-6,38:1.38E-4):0.013517):0.009205):0.034623):0.027506):0.029396,((39:0.007905,40:0.011157):0.035505,(((41:0.005034,42:0.005262):0.029284,(43:0.037532,44:0.015672):0.015369):0.007934,(45:0.025104,(46:0.019452,(47:0.024654,48:0.018795):0.005096):0.003624):0.012662):0.017568):0.044299):0.030824,(9:0.097817,(8:0.394133,(7:0.542785,((5:0.435938,6:0.245375):0.333502,((3:1.110317,4:0.71986):0.140019,((49:0.921745,50:0.512011):0.111821,(2:0.190047,1:0.212263):0.231602):0.142603):0.09977):0.087141):0.076208):0.138647):0.058059):0.010535):0.01368):0.016486):0.024908):0.113662):0.070434):0.326242):0.0); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1302869400854; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6772331302815087750; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #6772331302815087750 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #6772331302815087750; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;