NEXUS
[File created by TreeBASE:  7/26/07  21:07:00]
[Matrix accession#: M2106]

BEGIN TAXA;
	TITLE M2106;
	DIMENSIONS  NTAX=23;
	TAXLABELS
		Paraphaeria_pilleata	Paraphaeria_michotii	Paraconiothyrium_fungicolum	Coniothryium_sp._AK9629	Paraconiothyrium_sporulosum_AJ293815	Paraconiothyrium_sporulosum_AJ293814	Coniothyrium_fuckelii	Paraconiothyrium_minitans_AJ293811	Paraconiothyrium_minitans_AJ293810	Paraconiothyrium_minitans_AJ293809	Paraconiothyrium_brasiliense	Paraconiothyrium_estuarinum	Paraphaeosphaeria_sp._AB096264	Paraconiothyrium_cyclothyrioides	Helminthosporium_velutinum_AF145704	Helminthosporium_velutinum_AF120262	Helminthosporium_solani	Leptosphaeria_bicolor_U04203	Leptosphaeria_bicolor_AF455415	Leptosphaeria_taiwanensis_AF439464	Leptosphaeria_taiwanensis_AF439463	Leptosphaeria_taiwanensis_AF439462	Massarina_lacustris
	;
END;

BEGIN CHARACTERS;
	TITLE M2106;
	DIMENSIONS NCHAR=572;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Paraphaeria_pilleata                       TCCATCTTTAACCAGGTGCGGTCGCGGCCTCCGGGTG--------AAAG--CCCGGGTGGT---------------TTCGCGCCGCATTCCTGCACCCTT----TTTATACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTAACAAAACCTT-TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCTTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGAGGGGGCGTGG-CCCGCATCCACGAAGCAACA-TTACCGTCT
		Paraphaeria_michotii                       TCCATCTAAAACCAGGTGCGGTCGCGGCCTCCAGGTG--------ATAA--CCTGGGTGGT---------------TTCGCGCCGCATTCCTGCACCCTT----TTTTTACGAGCACCTTT-GTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTGATAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAATAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCTTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGAGGGGGCGTGG-CCCGCATCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_fungicolum                TCTATTTG---TTGGATGTGGTCGCGGCCCCC-------------GTAA--CCCGGGTGGT-AGGGGTAACACCCTCACGCGCCACATGCACTAATCCTC----TTTTTACGAGCACCTTCTGTT-CTCCTTCGGCGGGGCAACCTGCCGTT--GGAAC-CAACAAAACC---TTTTTGAAKTC--AGTATTACCTGTTCTGATACAAACAATCGTAACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACA-TTGCG--TCTACGAG-GGGCGCGG-CCCGCGTCCACGAAGCAACATTTACCGTCT
		Coniothryium_sp._AK9629                    TCCATCTC-AACCAGGTGCGGTCGCGGCCCTCGGGGG-------TTCT-CTCCCGGGTGGT-AGGGGTAACACCCTCACGCGCCGCATTCCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTAACAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTCGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGGGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_sporulosum_AJ293815       TCCATCTC-AACCAGGTGCGGTCGCGGCCCTCGGGGG-------TTCT-CTCCCGGGTGGT-AGGGGTAACACCCTCACGCGCCGCATTCCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTAACAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTCGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGGGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_sporulosum_AJ293814       TCCATCTC-AACCAGGTGCGGTCGCGGCCCTCGGGGG-------TTCT-CTCCCGGGTGGT-AGGGGTAACACCCTCACGCGCCGCATTCCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTAACAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTCGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGGGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Coniothyrium_fuckelii                      TCCATCTC-AACCAGGTGCGGTCGCGGCCCTCGGGGG-------TTCT-CTCCCGGGTGGT-AGGGGTAACACCCTCACGCGCCGCATTCCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACTTAACAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTCGCGCGCGGACTCGCCCCAAATTCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGGGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_minitans_AJ293811         TCCATCCT-TAACAGGTGCGGTCGCGGCCCCTGGGG---------GCT-CCCCCAGGTGGTAAGGTGAAATACCCTATCGCGCCGCATACCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACCTGAT-AAACCT--TTTTTGCA-TCT-AGTATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTTGCGCGCGGACTCGCCCCAAACTCATTGGCAGCGGTTTTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGAGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_minitans_AJ293810         TCCATCCT-TAACAGGTGCGGTCGCGGCCCCTGGGG---------GCT-CCCCCAGGTGGTAAGGTGAAATACCCTATCGCGCCGCATACCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACCTGAT-AAACCT--TTTTTGCA-TCT-AGTATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTTGCGCGCGGACTCGCCCCAAACTCATTGGCAGCGGTTTTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGAGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_minitans_AJ293809         TCCATCCT-TAACAGGTGCGGTCGCGGCCCCTGGGG---------GCT-CCCCCAGGTGGTAAGGTGAAATACCCTATCGCGCCGCATACCTGCATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGCT--GGAACCTGAT-AAACCT--TTTTTGCA-TCT-AGTATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTTGCGCGCGGACTCGCCCCAAACTCATTGGCAGCGGTTTTTGCCTCCTCTCGCGCAGCACAATTGCG--TCTGCGAGGGGGCGTGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_brasiliense               ATCTATTC-CATGAGGTGCGGTCGCGGCCCTCGGCGGGAGCATCAGCTGCCGTCGGGCGGT-AGAGGTAACACTTTCACGCGCCGCATGTCTGAATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGCGGGGCAACCTGCCGTT--GGAACCTATCAAAACCTT-TTTTTGCA-TCT-AGCATTACCTGTTCTGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGCGGACTCGCCCCAAATGCATTGGCAGCGGTCCTTGCCTCCTCTCGCGCAGCACA-TTGCG--CTTCTCGAGGTGCGCGG-CCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraconiothyrium_estuarinum                ACCAATTC-AAC--GGTGTGGTCGCGGCCTCCGGGGG--------TTCCCCCCCGGGCGGT-AGAGGTAACACTCTCACGCGCCACATGTCTGAATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGTGGGGCAACCTGCCGCT--GGAACTTATCAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCAGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGTGGACTCGCCCCAAATTCATTGGCAGCGGTCTTTGCCTCCTCTCGCGCAGCACA-TTGCG--CTTCAGAG-GGGCGTGG-GCCGCGTCCACGAAGCAACA-TTACCGTCT
		Paraphaeosphaeria_sp._AB096264             ACCAATTC-AAC--GGTGTGGTCGCGGCCTCCGGGGG---------CTCCCCCCGGGCGGT-AGAGGTAACACTCTTACGCGCCACATGTCTGAATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGTGGGGCAACCTGCCGTT--GGAACTTATCAAAACCTT-TTTTTGCA-TCT-AGCATTACCTGTTCAGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGTGGACTCGCCCCAAATTCATTGGCAGCGGTCTTTGCCTCCTCTCGCGCAGCACA-TTGCG--CTTCAGAG-GGGTGTGG-GCCGCGTCCACGAAGCAACA-TTATCGTCT
		Paraconiothyrium_cyclothyrioides           ACCAATTC-AAC--GGTGTGGTCGCGGCCTCCGGGGG---------CTCCCCCCGGGCGGT-AGAGGTAACACTCTTACGCGCCACATGTCTGAATCCTT----TTTTTACGAGCACCTTTCGTT-CTCCTTCGGTGGGGCAACCTGCCGTT--GGAACTTATCAAAACCT--TTTTTGCA-TCT-AGCATTACCTGTTCAGATACAAACAATCGTTACAACTTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCTGCGCGTGGACTCGCCCCAAATTCATTGGCAGCGGTCTTTGCCTCCTCTCGCGCAGCACA-TTGCG--CTTTAGAG-GGGTGTGG-GCCGCGTCCACGAAGCAACA-TTATCGTCT
		Helminthosporium_velutinum_AF145704        CATTTTA-------GCTGCCG-CAAGGCA------------------------------------GCAACCGCCCACCGCGAGGTGGGGTCGGCACCCTC----TGTCTACTTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGC-AAGGAACCCCTTAAACTCTTGCATCTAAAGTATTACAAAACTCTGATAACTAC-TT-AATTA-TCACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAAAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTTCGCGCGTGGACTCGCCCCAAAGTTATTGGCAGCGGTCGTGCCAGCTTCTCGTGCAGCACA-TTGCGCTTCTTGAAGCCCTGGTGGATCAGCATCCAGCAAGCC-TTTTTATTAACT
		Helminthosporium_velutinum_AF120262        CATTTTA-------GCTGCCG-CAAGGCA------------------------------------GCAACCGCCCACCGCGAGGTGGGGTCGGCACCCTC----TGTCTACTTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGC-AAGGAACCCCTTAAACTCTTGTATCTAAAGTATTACAAAACTCTGATAACTAC-TT-AATTA-TCACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAAAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCCTCCGCGCGTGGACTCGCCCCAAAGTTATTGGCAGCGGTCGTGCCAGCTTCTCGTGCAGCACA-TTGCGCTTCTTGAAGCCCTGGTGGATCAGCATCCAGCAAGCC-TTTTTATTAACT
		Helminthosporium_solani                    CGTTTCA-------GCGGCCG-CAAGGCT------------------------------------GCAACCGCCCGCCGCAAGGTGGGGTCGGAACCCTC----TGTCTACCTGTACCACTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGC-CAGGAATCCCTTAAACCCTTGTATCTGAAGCATATCAAAACTCTGATAACCAC-TT-AATTA-TCACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCGCTTCCCCGCGTGGACTCGCCCCAAAGTTATTGGCAGCGGTCGTGCCAGCTTCTCGTGCAGCACA-TTGCGCTTCTTGAAGCCCTGGTGGACCAGCGTCCAGCAAGCCTTTTTTCATAACT
		Leptosphaeria_bicolor_U04203               -ATT--------------ACG-CAAGCTA--------------------------------------TAGC-CCCGAAAGGGGTTATTGCATCCACCCTT----TGTCTACTTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGCTAGGGAACCCCACAAACCCTTGTATTTAAAGTATCA-AAATCTCTGATAACTAT-TTAAATTA-TTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCG-CTTTCTGCGTGGACTCGCCCCAAAGTCATTGGCAGCGGTCGTGCCAGCTTCTCACGCAGCACATTTGCGTTTCTTGAAG-TTTGGTGGATCAGCATCCAGTAAGC-TCTTTTA-TGACT
		Leptosphaeria_bicolor_AF455415             -ATT--------------ACG-AAAGCTA--------------------------------------TAGC-CCCTTCGGGGGTTATTGCATCCACCCTT----TGTCTACTTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGCTA-GGAACCCCTTAAACTCTTGTATTTACAGTATTA-AAATCTCTGATAACTAT-TTAAATTA-TTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCG-CTTTATGCGTGGACTCGCCCCAAAGTCATTGGCAGCGGTCGTGCCAGCTTCTCGCGCAGCACATTTGCGTTTCTTGAAG-TTTGGAGGATCAGCATCCAGTAAGC-TCTTTTA-TGACT
		Leptosphaeria_taiwanensis_AF439464         -ATT--------------ACG-CAAGCTA--------------------------------------TAGC-CCCTTCGGGGGTTATTGCACCTACCCTT----TGTCTACGTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGCT-GGG-ACCCCTTAAACCCTTGTATTTACAGTATGA-AAATCTCTGATAACCAT-TTAAATTA-TTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCG-TTTTATGCGCGGACTCGCCCCAAAGTCATTGGCAGCGGTCGTGCCAGCTTCTCGCGCAGCACATTTGCGTTTCTTGAAG-TTTGGTGGATCAGCGTCCAGTAAGC-TATTTTA-TGACT
		Leptosphaeria_taiwanensis_AF439463         -ATT--------------ACG-CAAGCTA--------------------------------------TAGC-CCCTTCGGGGGTTATTGCACCTACCCTT----TGTCTACGTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGCT-GGG-ACCCCTTAAACCCTTGTATTTACAGTATGA-AAATCTCTGATAACCAT-TTAAATTA-TTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCG-TTTTATGCGCGGACTCGCCCCAAAGTCATTGGCAGCGGTCGTGCCAGCTTCTCGCGCAGCACATTTGCGTTTCTTGAAG-TTTGGTGGATCAGCGTCCAGTAAGC-TATTTTA-TGACT
		Leptosphaeria_taiwanensis_AF439462         -ATT--------------ACG-CAAGCTA--------------------------------------TAGC-CCCTTCGGGGGTTATTGCACCTACCCTT----TGTCTACGTGTACCTCTTGTTGTTTCCTCGGCAGGCTTGCCTGCCGCT-GGG-ACCCCTTAAACCCTTGTATTTACAGTATGA-AAATCTCTGATAACCAT-TTAAATTA-TTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAG--------------------------------CTCTG-----CTTGGTGTTGGGCGTCTGTCCCG-TTTTATGCGCGGACTCGCCCCAAAGTCATTGGCAGCGGTCGTGCCAGCTTCTCGCGCAGCACATTTGCGTTTCTTGAAG-TTTGGTGGATCAGCGTCCAGTAAGC-TATTTTA-TGACT
		Massarina_lacustris                        -AAACATACATGGTCGTCGGCCACTCCCGGGGCAGGCTGGGACCATCGTTTCGACGATGGTCCCCGTCCGCCCCCGGCGGGTGCTCAGCCGTCGCTCTTTACCTTGACTATGCGCACCTTTTGTTGTTTCCTCGGCAGGCCTCCTGCCGCTT--GGAACCCCATAAACCTTTGTA--TA-AGCATT--AAACTTCTGA-AACAATACAAAATTACTTACAACTTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATCTAAACCCTCAAGCCTTCTGGGTATTGTACCGCCTCCGCGCGGCACTCTGCCCGGCTTGGTGTTGGGCGTCTGTCCCGCCTC-GCGTGCGGACTCGCCCCAAATGCATTGGCAGCGG-CCTTCCAGCTTCTCGCGCAGCACA-TTGCGTCCCGAGG-TATGGCGAGGGCGAGCGTCCAGCAAGCAACCCCA---CAAT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 572 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
CHARSET ITS1 = 1 - 219 ; 
 CHARSET indel1 = 388 - 419 425 - 429 ; 
 CHARSET indel2 = 1 - 77 182 ; 
 OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;