#NEXUS [written Tue Mar 23 13:53:42 EDT 2010 by Mesquite version 2.5 (build j77) at stephen-rehners-computer.local/10.0.0.47] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=77; TAXLABELS Colletotrichum_tropicale_8416 Colletotrichum_tropicale_Z1093 Colletotrichum_tropicale_4226 Colletotrichum_tropicale_Z1080 Colletotrichum_tropicale_8453 Colletotrichum_tropicale_E406 Colletotrichum_tropicale_E704 Colletotrichum_tropicale_E347 Colletotrichum_tropicale_7585 Colletotrichum_tropicale_E449 Colletotrichum_tropicale_E1164 Colletotrichum_tropicale_5087 Colletotrichum_tropicale_5101 Colletotrichum_tropicale_E1153 Colletotrichum_tropicale_4861 Colletotrichum_tropicale_2126 Colletotrichum_tropicale_7423 Colletotrichum_tropicale_8364 Colletotrichum_tropicale_GJS_08_42 Colletotrichum_tropicale_E649 Colletotrichum_tropicale_5283 Colletotrichum_tropicale_7584 Colletotrichum_tropicale_gjs08_56 Colletotrichum_tropicale_5806 Colletotrichum_tropicale_GJS08_54 Colletotrichum_tropicale_Q633 Colletotrichum_tropicale_E1533 Colletotrichum_tropicale_3870 Colletorichum_gloeosporioides_IMI356878 Colletotrichum_tropicale_E1456 Colletotrichum_tropicale_E2303 Colletotrichum_tropicale_4259 Colletotrichum_tropicale_E1198 Colletotrichum_tropicale_8401 Colltotrichum_sp_indet_2_V1H1 Colltotrichum_sp_indet_2_7767 Colltotrichum_sp_indet_2_GJS08_52 Colltotrichum_sp_indet_2_1091 Colltotrichum_sp_indet_2_1092 Colletotrichum_ignotum_E42 Colletotrichum_ignotum_E886 Colletotrichum_ignotum_E1418 Colletotrichum_ignotum_7574 Colletotrichum_ignotum_3589 Colletotrichum_ignotum_1087 Colletotrichum_ignotum_3679 Colletotrichum_sp_indet_1_GJS08_144 Colletotrichum_sp_indet_1_GJS08_145 Colletotrichum_sp_indet_1_GJS08_143 Colletotrichum_sp_indet_1_GJS08_147 Colletotrichum_sp_indet_1_GJS08_146 Colletotrichum_sp_indet_1_GJS08_148 Colletotrichum_ignotum_E183 Colletotrichum_ignotum_8395 Colltotrichum_sp_indet_2_GJS08_57 Colletotrichum_theobromicola_GJS08_51 Colletotrichum_theobromicola_GJS08_43 Colletotrichum_theobromicola_GJS08_46 Colletotrichum_theobromicola_GJS08_45 Colletotrichum_theobromicola_GJS08_48 Colletotrichum_theobromicola_GJS08_50 Colletotrichum_theobromicola_GJS08_47 Colletotrichum_boninense_8975 Colletotrichum_boninense_Z1098 Colletotrichum_boninense_LCM232 Colletotrichum_boninense_Z1090 Colletotrichum_sp_Q855 Colletotrichum_sp_Q882 Colletotrichum_sp_E2550 Colletotrichum_sp_4766 Colletotrichum_sp_1093 Colletotrichum_sp_E1249 Colletotrichum_sp_E681 Colletotrichum_sp_3386x Colletotrichum_sp_4801 Colletotrichum_sp_E2452 Colletotrichum_sp_LCM243 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=958; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Colletotrichum_tropicale_8416 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_Z1093 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_4226 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_Z1080 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_8453 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E406 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E704 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E347 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_7585 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E449 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E1164 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_5087 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_5101 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E1153 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_4861 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_2126 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_7423 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_8364 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_GJS_08_42 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E649 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_5283 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_7584 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_gjs08_56 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_5806 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_GJS08_54 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_Q633 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E1533 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_3870 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccaa---ccctcg-----cttgact---tgcgagtttgctaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatatgctt----GTgggc---cccactttttattcccccgtaatgctgtcgaaatactgactcttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgtaaattg-------gctctccgaaaatc----------tctttttttggatgggcgcaatttctcagtg--------------------------------------tgcaaa--tctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletorichum_gloeosporioides_IMI356878 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gcggctgagct------------------------------------------------------------c---------------------------------------------------------------------ggttcg-tagaacaccat---tcctcg-----catgatt---tgcgagtttactaacaaacg------aataggcaagggttca------------------------------------------------------------ttcaaatacgcat----GTccgg---acccacttttatacccccctcatgctgtcaacatactgatttttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgctctctggaagttcgagactcccaaatactatgttaccgtcattggtaagtctg------ctctgcg---ctgaaaatgc-------tctccctgaagacc-----------actcttctgggcaggcgcaactttccacgg---------------------------------------gcaaaattctgtcaag--gcacgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E1456 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacatt--catc-aca------------gcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggttct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtttc-----ttcgcgatcctgaaattgttttgctgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tgtttttgggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataagacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E2303 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacatt--catc-aca------------gcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggttct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtttc-----ttcgcgatcctgaaattgttttgctgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tgtttttgggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataagacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_4259 ?????????????????catcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacatt--catc-aca------------gcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggttct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtttc-----ttcgcgatcctgaaattgttttgctgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tgtttttgggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataagacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_E1198 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacatt--catc-aca------------gcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggttct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtttc-----ttcgcgatcctgaaattgttttgctgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tgtttttgggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataagacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_tropicale_8401 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacatt--catc-aca------------gcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggttct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtttc-----ttcgcgatcctgaaattgttttgctgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tgtttttgggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataagacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_V1H1 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccagctacatcagaacaacaaactaacttctccaa------gccgccgagtt------------------------------------------------------------g---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggctcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtctc-----ttcgcgatcctgaaattgttttactgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tcttttttggatgggcgcgattttgcagag--------------------------------------tggaaatctctcataagacacactcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_7767 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccagctacatcagaacaacaaactaacttctccaa------gccgccgagtt------------------------------------------------------------g---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggctcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtctc-----ttcgcgatcctgaaattgttttactgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tcttttttggatgggcgcgattttgcagag--------------------------------------tggaaatctctcataagacacactcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_GJS08_52 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccagctacatcagaacaacaaactaacttctccaa------gccgccgagtt------------------------------------------------------------g---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggctcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtctc-----ttcgcgatcctgaaattgttttactgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tcttttttggatgggcgcgattttgcagag--------------------------------------tggaaatctctcataagacacactcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_1091 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccagctacatcagaacaacaaactaacttctccaa------gccgccgagtt------------------------------------------------------------g---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggctcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtctc-----ttcgcgatcctgaaattgttttactgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tcttttttggatgggcgcgattttgcagag--------------------------------------tggaaatctctcataagacacactcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_1092 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccagctacatcagaacaacaaactaacttctccaa------gccgccgagtt------------------------------------------------------------g---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggctcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGT-ggg--tcgccgtctc-----ttcgcgatcctgaaattgttttactgatttttcgcAGg-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gcttcctcgcg---ctgaaaattg-------gctgtccgaaaacc-----------tcttttttggatgggcgcgattttgcagag--------------------------------------tggaaatctctcataagacacactcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_E42 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagccta--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacc----------tgtttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_E886 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagccta--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacc----------tgtttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_E1418 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagccta--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacc----------tgtttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_7574 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagccta--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacc----------tgtttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_3589 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacctg----tttttttttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_1087 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------ttcgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctcttcgaaaact------tttttttttttttggatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_3679 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggtaagtcacaaccacatccacctacatcagaacaataaactgacttctccaaa-----gccgccgaattgtattttca--acccgt-cccatcacatcatggatcgttcaagtattaacaagaagacagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcg------------------------------------------------------------ttcaaatacgcat--------------------------------------------------------------g------------------------------------------------------------gGTttggggttcccagttta---------tccgcgacgctgagaatattttctgacttttcccAGggttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctcttcgaaaacctgttttttttttttttttttgatgggcgcaatttttcagtg--------------------------------------tgtaaatctctcatacgacacacgcactgacatgtcactcagacgctcccggtcaccgtgacttcttcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_144 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_145 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_143 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_147 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_146 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_indet_1_GJS08_148 ggtatcgacaagcgtaccatcgagaagtttgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accacctttccatc-aca------------tcatc-gtcatttactaacagaaaga-tagtg------------------------------------------------------------------------gcaaggggtct------------------------------------------------------------ttcaaatatgcct----GTtgg----acccacttttattcccccgtaatgctgccggaatactgatcgtttctAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttcgagactcccagatactatgtcaccgtcattggtaagtctg--gctttcttgcg---ctgaaaattg-------gctctccgaaaacc---------------tcttgtttgggcgcaattgttcagtg--------------------------------------tgcaaatctctcacaaggcacatgcactgacacatcactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_E183 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accaccctcccatc-aca------------tcatc-gacatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggcagt------------------------------------------------------------ttcaaatacgcat----GTtagcggtttcccgtttttttcccccgtgatgccgtcaaaatactgacttgtcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctt--ttgcg---ctggaaattg-------gctctccaaaaaca---------atttctttttggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataaggaccacgcactgacatgtcattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_ignotum_8395 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------gcaagt---accaccctcccatc-aca------------tcatc-gtcatttactaacaaaaaga-tagtg------------------------------------------------------------------------gcaagggcagt------------------------------------------------------------ttcaaatacgcat----GTtagcggtttcccgttttttccccccgtgatgccgtcaaaatactgacttgtcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtctg--gctt--ttgcg---ctggaaattg-------gctctccaaaaaca---------atttctttttggatgggcgcgattttgcaatg--------------------------------------tggaaatctctcataaggaccacgcactgacatgtcattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colltotrichum_sp_indet_2_GJS08_57 ?????????????????catcgagaagttcgagaaggaa-----------------------------------------------------------gccgccgaattgtaggtcgc--cccaacacacctcacatcatggttcattcaagtattaacaagaagatagg---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct----GTatgcggaaacccgtttt---ttcccgtgatgctgtcgaaatactgacttttcccAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaggtactatgtcaccgtcattggtaagtctg--gcttgcttgcg---ctgagaattg-------gctgtccgaaaacc------------tccttttgggtgggcgcaaattttcagta--------------------------------------tgtaaatctctcatacg--acacgcactgacatgtcattcagacgctcccggtcaccgtgacttcatcaagaacatgatcattg Colletotrichum_theobromicola_GJS08_51 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_43 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_46 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_45 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_48 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_50 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacattcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_theobromicola_GJS08_47 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagctgtaagaaaattccccgc-ctcatcacatcagaatttgt----gtactgacaa-tccacagc---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgatatcgccctctggaagttcgagactccccgctactatgtcaccgtcattggtaagttt-----ccacttgca---gtgaagactc-------gctctctg---------------------ttttgtacgggcgctgtttttcagtg--------------------------------------cgcgaaattttcacaagccacatattctgacatcacatgcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_boninense_8975 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---gtgagtacacttcccacga-tca------------tctgc-gacctctactaac-aacaaaacag-g------------------------------------------------------------------------gcaagggcagc------------------------------------------------------------ttcaagtatgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagttctttgatttcttccgaatctgcgaattgcggcaagatttccacgaaatt-------gcgagaccccagtggcctgtgcgatttttggcgattttttcaccgattcgcggattgcgagactgcggtcttcgtggcattcacat-ggaaacatgcactaac--cctcatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_boninense_Z1098 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---gtgagtacacttcccacga-tca------------tctgc-gacctctactaac-aacaaaacag-g------------------------------------------------------------------------gcaagggcagc------------------------------------------------------------ttcaagtatgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagttctttgatttcttccgaatctgcgaattgcggcaagatttccacgaaatt-------gcgagaccccagtggcctgtgcgatttttggcgattttttcaccgattcgcggattgcgagactgcggtcttcgtggcattcacat-ggaaacatgcactaac--cctcatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_boninense_LCM232 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---gtgagtacacttcccacga-tca------------tctgc-gacctctactaatgaaaaaaacag-g------------------------------------------------------------------------gcaagggcagc------------------------------------------------------------ttcaagtacgctt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtccttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagttctttgatttcttccgaatctgcgaatcgcgacaagatttccatgaaatt-------gcttgtccccagtggcctttgcgatttttggcgaatttttcaccgattcgcggattgcgagactgcggtcttcgtggcattcacatcggaaacatgcactaac--cctcatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_boninense_Z1090 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgccgagct------------------------------------------------------------c---gtgagtacacttcccacga-tca------------tctgc-gacctctactaatgaaaaaaacag-g------------------------------------------------------------------------gcaagggcagc------------------------------------------------------------ttcaagtacgctt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtccttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagttctttgatttcttccgaatctgcgaatcgcgacaagatttccatgaaatt-------gcttgtccccagtggccttagcgatttttggcgaatttttcaccgattcgcggattgcgagactgcggtcttcgtggcattcacattggaaacatgcactaac--cctcatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_Q855 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------ggtgcagta-----cc-----ccccaaaacaccatggcagc-tttaaa--tactgacaattt------aataggaaaggggagc------------------------------------------------------------ttcaaatacgcatTTACGTgtttcccgtctttt--tcgcgcttctgacgatactaatg--gctttg--ttg-cAGg------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgctctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagtttc--agccttttctaaaacggaaaaacggaaaaggaattgcggggaatc------------ttcctgcaatttttctggatttttctgga--------------------------------------t-----tttttttgaaattggcggttctaac--acctcccagacgcccccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_Q882 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggttcgtgatccatttccccgtgctgaactcggtagacacatgctaacatcttcgaccagctgcggagct------------------------------------------------------------c---------------------------------------------------------------------ggtatgctacatttccaaag-ccccaa-----cctggctca-ttcaag--tattcattaacg-caaacgacaggaaagggatct------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------gGT--gcgttttaagctgttttgcccttccttttcgaattttgaag-ttctgacgatagtcgcAG-gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgctctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagcttc--agcctttcctgaaacagaaaaacggaaaaggaattgcgggga---------------cccttgcaattttcctggacttttctgga--------------------------------------tttttctttttttgatattggcggttctaac--tcctcccagacgctcccggtcaccgtgacttcatcaagaacatgatcaccg Colletotrichum_sp_E2550 ggtatcgacaagcgtaccatcgagaagttcgagaaggagggttagtcgtccacattcccat--------cgttctgagctcgtaactaacttgtccaagctgccgaact------------------------------------------------------------t---gtaatccgacaccccaaaa-tgacaaaaaagcatctttgtagcatttgctaaccaaaaa---cag-g------------------------------------------------------------------------gcaagggcagc------------------------------------------------------------ttcaagtacgctt--------------------------------------------------------------g------------------------------------------------------------gGT--gagtatcccgatgggta-ttcctcttgcaaaaattttg----ttctgacggtttctccAG-gttcttgacaagc---------------------------------------------------------tcaaggccgagcgtgagcgtggtatcaccatcgacattgctctctggaagttcgagactcccaagtactatgtcaccgtcattggtaagctcc--actctttcccg-------aagatcgaaaaagagccgcggacaact------------ttccccggattttttctgatttttgttga---------------------------------------------ttttttggggttggtgtttctaac--gtaactcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_4766 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gaaagggttcg------------------------------------------------------------ttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtgctggacaagcgtaagaaaagcctctaaaag-atacctatggacgagatgctgacgtgc---ccttagttaaggccgagcgtgagcgtggtatcaccatcgatattgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagtttc--gcaactttcagtct------------aaacgactttcacag----------------------------------------------------------------------------------------------tccaaagaaaaaacactgac--acaaatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_1093 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttca------------------------------------------------------------ttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtgcttgacaagcgtaagattcgcctccaaaagaataccctaggacgagatgttgactttttg-ccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--gcatctttcggtcc-----------------------------------------------------------------------------------------------------------------------------aaaaaaacgcattaac--acatatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_E1249 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttca------------------------------------------------------------ttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtgcttgacaagcgtaagattcgcctccaaaagaataccctaggacgagatgttgactttttg-ccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--gcatctttcggtcc-----------------------------------------------------------------------------------------------------------------------------aaaaaaacgcattaac--acatatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_E681 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttca------------------------------------------------------------ttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtgcttgacaagcgtaagattcgcctccaaaagaataccctaggacgagatattgactttttg-ccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--gcatctttcggtcc-----------------------------------------------------------------------------------------------------------------------------aaaaaaacgcattaac--acatatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_3386x ggtatcgacaagcgaaccatcgagaagttcgagaaggag-----------------------------------------------------------gccgccgagct------------------------------------------------------------t---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggttcc------------------------------------------------------------ttcaagtacgcct--------------------------------------------------------------gGTgagttttccctctctttctagcctctattcagcttgac---taatggtgattatatAGg-----------------------------------------------------------------gttcttgacaagcgtaagatttgcctccaagaaaaaaccctaggacgagatattgactttttg-ccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--ccaactttc------------------aacaactttcgcag---------------------------------------------------------------------------------------------tctggagcagaaggcactgac--acatatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_4801 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggcaggtgagatgcttctgtcccttccactccacgagactcgcgactaacagtttcgccaaaaagtttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagcgtaagatctgcctccaaaaa-ataccctaggacgagatattgactttttgcccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--ccaactttcaacaactttcacagtcgaaacaactttcacag---------------------------------------------------------------------------------------------tctggagcagaaggcactgac--acacatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_E2452 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggcaggtgagatgcttctgtcccttccactccacgagactcgcgactaacagtttcgccaaaaagtttcaagtacgcgt--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gttcttgacaagcgtaagatttgcctccaaaaa-ataccctaggacgagatattgactttttgcccccagtcaaggccgagcgcgagcgtggtatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--ccaaccttcaacaactttcacagtcgaaacaactttcacag---------------------------------------------------------------------------------------------tctggagcagaaggcactgac--acatatcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg Colletotrichum_sp_LCM243 ggtatcgacaagcgtaccatcgagaagttcgagaaggag-----------------------------------------------------------gctgctgagct------------------------------------------------------------c---------------------------------------------------------------------g------------------------------------------------------------------------gcaagggcaggtgagatgcttttgccccttccactgcgcgagactcgcgactaacaatgtcgcc-aaaagtttcaagtacgcct--------------------------------------------------------------g------------------------------------------------------------g-----------------------------------------------------------------gtgcttgacaagcgtaagatttgcctccaagaa-aaaccctaggacgagatattgactttttg-caccagttaaggcggaacgcgagcgcggcatcaccatcgatatcgctctctggaagttcgagacccccaagtactatgtcaccgtcattggtaagttcc--gcaactgtcagtcat----------------------------------------------------------------------------------------------------------------------------aaaaaaacgcactaac--ac-catcagacgctcccggtcaccgtgacttcatcaagaacatgatcactg ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 958; END; BEGIN TREES; Title 'Trees from "Rojas_etal_Colletotrichum_tef1_1b.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Colletotrichum_tropicale_8416, 2 Colletotrichum_tropicale_Z1093, 3 Colletotrichum_tropicale_4226, 4 Colletotrichum_tropicale_Z1080, 5 Colletotrichum_tropicale_8453, 6 Colletotrichum_tropicale_E406, 7 Colletotrichum_tropicale_E704, 8 Colletotrichum_tropicale_E347, 9 Colletotrichum_tropicale_7585, 10 Colletotrichum_tropicale_E449, 11 Colletotrichum_tropicale_E1164, 12 Colletotrichum_tropicale_5087, 13 Colletotrichum_tropicale_5101, 14 Colletotrichum_tropicale_E1153, 15 Colletotrichum_tropicale_4861, 16 Colletotrichum_tropicale_2126, 17 Colletotrichum_tropicale_7423, 18 Colletotrichum_tropicale_8364, 19 Colletotrichum_tropicale_GJS_08_42, 20 Colletotrichum_tropicale_E649, 21 Colletotrichum_tropicale_5283, 22 Colletotrichum_tropicale_7584, 23 Colletotrichum_tropicale_gjs08_56, 24 Colletotrichum_tropicale_5806, 25 Colletotrichum_tropicale_GJS08_54, 26 Colletotrichum_tropicale_Q633, 27 Colletotrichum_tropicale_E1533, 28 Colletotrichum_tropicale_3870, 29 Colletorichum_gloeosporioides_IMI356878, 30 Colletotrichum_tropicale_E1456, 31 Colletotrichum_tropicale_E2303, 32 Colletotrichum_tropicale_4259, 33 Colletotrichum_tropicale_E1198, 34 Colletotrichum_tropicale_8401, 35 Colltotrichum_sp_indet_2_V1H1, 36 Colltotrichum_sp_indet_2_7767, 37 Colltotrichum_sp_indet_2_GJS08_52, 38 Colltotrichum_sp_indet_2_1091, 39 Colltotrichum_sp_indet_2_1092, 40 Colletotrichum_ignotum_E42, 41 Colletotrichum_ignotum_E886, 42 Colletotrichum_ignotum_E1418, 43 Colletotrichum_ignotum_7574, 44 Colletotrichum_ignotum_3589, 45 Colletotrichum_ignotum_1087, 46 Colletotrichum_ignotum_3679, 47 Colletotrichum_sp_indet_1_GJS08_144, 48 Colletotrichum_sp_indet_1_GJS08_145, 49 Colletotrichum_sp_indet_1_GJS08_143, 50 Colletotrichum_sp_indet_1_GJS08_147, 51 Colletotrichum_sp_indet_1_GJS08_146, 52 Colletotrichum_sp_indet_1_GJS08_148, 53 Colletotrichum_ignotum_E183, 54 Colletotrichum_ignotum_8395, 55 Colltotrichum_sp_indet_2_GJS08_57, 56 Colletotrichum_theobromicola_GJS08_51, 57 Colletotrichum_theobromicola_GJS08_43, 58 Colletotrichum_theobromicola_GJS08_46, 59 Colletotrichum_theobromicola_GJS08_45, 60 Colletotrichum_theobromicola_GJS08_48, 61 Colletotrichum_theobromicola_GJS08_50, 62 Colletotrichum_theobromicola_GJS08_47, 63 Colletotrichum_boninense_8975, 64 Colletotrichum_boninense_Z1098, 65 Colletotrichum_boninense_LCM232, 66 Colletotrichum_boninense_Z1090, 67 Colletotrichum_sp_Q855, 68 Colletotrichum_sp_Q882, 69 Colletotrichum_sp_E2550, 70 Colletotrichum_sp_4766, 71 Colletotrichum_sp_1093, 72 Colletotrichum_sp_E1249, 73 Colletotrichum_sp_E681, 74 Colletotrichum_sp_3386x, 75 Colletotrichum_sp_4801, 76 Colletotrichum_sp_E2452, 77 Colletotrichum_sp_LCM243; TREE PAUP_1 = (1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,((29,(47,48,49,50,51,52)),(((((30,31,32,33,34),(35,36,37,38,39)),(53,54)),(((40,41,42,43),44,45,46),55)),((56,57,58,59,60,61,62),(((63,64),(65,66)),(((67,68),69),(((70,((71,72),73)),77),(74,(75,76))))))))); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 958; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 958; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7160451183033609767; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2127465753863195706; checksum 0 3703821632 null; endTell; getWindow; tell It; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 22; setFont SanSerif; setFontSize 10; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2127465753863195706 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;