#NEXUS [written Wed Dec 18 16:45:50 CST 2013 by Mesquite version 2.75 (build 566) at shearer.life.uiuc.edu/130.126.54.178] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=51; TAXLABELS Conioscypha_peruensis Setosphaeria_monoceras_ Pleospora_herbarum_ Dothidea_sambuci_ Chaetomium_globosum_ Sordaria_fimicola_ Codinaea_simplex_ Chaetosphaeria_innumera Cercophora_newfieldiana Diaporthe_padi Diaporthe_pustulata Valsa_ambiens Leucostoma_niveum Conioscypha_japonica Conioscypha_lignicola Conioscyphascus_varius Carpoligna_pleurothecii Ascotaiwania_sawada Ascotaiwania_mitriformis Ophiostoma_piliferum Ophiostoma_africanum Magnaporthe_grisea Gaeumannomyces_graminis_var._graminis Pseudohalonectria_suthepensis_ Pseudohalonectria_lignicola_a Pseudohalonectria_lignicola_b Gaeumannomyces_cylindrosporus Gaeumannomyces_graminis_var._avenae Gaeumannomyces_graminis_var._tritici Magnaporthe_salvinii Mycoleptodiscus_coloratus Ophioceras_sp._CMU26633 Ophioceras_commune_a Ophioceras_commune_b Ophioceras_commune_c Ophioceras_dolichostomum_a Ophioceras_dolichostomum_b Ophioceras_dolichostomum_c Ophioceras_dolichostomum_d Ophioceras_hongkongense Ophioceras_leptosporum Ophioceras_tenuisporum Pyricularia_borealis Dactylaria_higginsii Xylaria_acuta Xylaria_hypoxylon Hypocrea_Scheinitzii Hypomyces_subiculosus_ Petriella_sordida Petriella_setifera Ascotaiwania_lignicola ; END; BEGIN CHARACTERS; TITLE Conioscypha_alignment; DIMENSIONS NCHAR=922; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Conioscypha_peruensis -GGARAAGAA?ACAACAGGGACTGCCTCAGTAACGGCGAGTGAAGCGGCACCAGCCCAGATTTGAAATCGGGT-TCCCCC-GCGGGGGCCTGAATTGTAGTCTGCAGATGGGTCTTTCT----GGCAACGCGGC-CGTCCAAGTGCCCTGGAATGGGACGCCGTAGAGGGTGAGAGCCCCGTACC-----GACGGCCGCCGCGCCGCCTGCAAAGCCCATTCGACGAGTCGAGTAGTTTGGAAATGCTGCTCAAATCGCGGGGTAAACCTCCCGTAAGGCTAAGTACTGGCCAGAGACCGATAGCGCACAAGTAGCGTGAGCGAAAGATGAAAAGAGCCTTGAACAAGGGCGTCAAACAGTATGTGAAATTGTTGTGGGGGAAGCGCCCGCGACCAGACTCGGG-GGCGGTTGGTTACCCGGCGGGCCCCCC-CGCCGGCGCACTCTGCC--GCCCCCGGGCCAGCATCGGTTGGGCCG-GGTGCCCACTGCTGCGGGGAACGTGG-C--TCCCTCC--GGGGAGTGTTATAGCCCCG--CAGCGACGCCCCC--GGCCCGACCGAGGACCGCGCTCTC--GAGCCCGGATGC-TGGCGTAA-TGGTCTCT-AGCGACCCGT-CTTGAAACACGGACCAAGGAG-TTGACCTGGCGTG---CGAGTGTATGGGTG-GCAAGCCCTAGC-GCGC-AATGAAAGTGAT-CTTGGGTGGG-ATCCCCGGCGCACCATCGACCGATCCTGAAGTT--TACGGATGGATTTGAGTAAGAGCACGCCGGGTCTGACCCGAAAGAAGGTGAACTATGCATGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGTGCATGGGGGCGAAAGACCAATCGAACCTTCTAG Setosphaeria_monoceras_ aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tctttc----agagtccgagttgtaatttgcagagggcgctttggctttg-----gcagc-ggtccaagttccttggaacaggacgtcacagagggtgagaatcccgtacgtggtcgctagctattgc----cgtgtaaagccccttcgacgagtcgagttgtttgggaatgcagctctaaatgggaggtaaatttcttctaaagctaaatattggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgga-aagagagtcaaacagcacgtgaaattgttgaaagggaagcgcttgcagccagacttgct-tgcagttgctcatccgggc----tttt-gcccggtgcactcttctg-ca-ggcaggccagcatcagtttgggcg-gtgggataaaggtctctgtcatgtac-c--tctcttc-ggggaggccttataggggag--gcgacataccacc-agcctagactgaggtccgcgca-tc---tgctaggatgc-tggcgtaa-tggctgta-agcggcccgt-cttgaaacacggaccaaggag-tctaacatctatg---cgagtgtttgggtg-tcaagcccgagc-gcgt-aatgaaagtgaa-cggaggtggg-aacccgggtgcaccatcgaccgatcctgaagtt--tacggaaggatttgagtaagagcatggctgttgggacccgaaagatggtgaactatgcttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaactatctag Pleospora_herbarum_ ----taagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tctttt----agggtccgagttgtaatttgcagagggcgctttggctttg-----gcagc-ggtccaagttccttggaacaggacgtcacagagggtgagaatcccgtacgtggtcgctagctatcgc----cgtgtaaagccccttcgacgagtcgagttgtttgggaatgcagctctaaatgggaggtaaatttcttctaaagctaaatattggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgga-aagagagtcaaacagcacgtgaaattgttgaaagggaagcgcttgcagccagacttgct-tgcagttgctcatccgggc----tttt-gcccggtgcactcttctg-ta-ggcaggccagcatcagtttgggcg-gtgggataaaggtctctgtcacgtac-c--tctcttc-ggggaggccttataggggag--acgacataccacc-agcctagactgaggtccgcgca-tc---tgctaggatgc-tggcgtaa-tggctgta-agcggcccgt-cttgaaacacggaccaaggag-tctaacatctatg---cgagtgtttgggtg-tcaagcccgagc-gcgt-aatgaaagtgaa-cggaggtggg-aacccgggtgcaccatcgaccgatcctgaagtt--ttcggaaggatttgagtaagagcatggctgttgggacccgaaagatggtgaactatgcttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaactatctag Dothidea_sambuci_ aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaatagctcaaatttgaaagctggc-ttat--------ggcccgcattgtaatttgtagaggatgctttta----ggca--gccgc-cggtcaagttccttggaacaggacgtcatagagggtgagaatcccgtatgtg---accggctctggcaccttatgtaaagctccttcgacgagtcgagttgtttgggaatgcagctctaaatgggaggtaaatttcttctaaagctaaatactggcgagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgga-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcttgcaatcagacttgga-cttggctgttcaacaggtc----ttct-gacctgcctattcagtct-tg-tccaggccagcatcagtttcggcg-gccggataaaggctctgggaatgtgg-ctttcccttcgggggaagtgttatagcccag-ggtgtaatacggcc-agctgggactgaggtccgcgct-tc---ggctaggatgc-tggcgtaa-tggttgta-agcggcccgt-cttgaaacacggaccaaggag-tctaacatctatg---cgagtgttagggtg-tcaaacccttac-gcgt-aatgaaagtgaa-cggaggtgag-aacccgggtgcatcatcgaccgatcctgatgtc--ttcggatggatttgagtaagagcatagctgttgggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggtataggggcgaaagactaatcgaaccatctag Chaetomium_globosum_ aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagc-gcaacagctcaaatttg?catctggc-ttc---------ggcccgagttgtaatttgcagaggaagctttag----g-cgc-ggcac-cttctgagtcccctggaacggggcgccatagagggtgagagccccgtata-----gttggatgcctagcc-tgtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctcaaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-cc????ggatcatccggtg----ttct-caccggtgcactccgccc-gg-?tcaggccagcatcggttctcgcg-gggggataaaggtcctgggaacgtag-c--tcctc----cgggagtgttatagcccgg-ggcgtaatgcctc---gcggggaccgaggttcgcgca-tc---tgcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcaaggttttgcg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcgttaa??cttggacccgaaagatggtgaactat?cttggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatctgagcatgggggcgaaagactaatcgaaccatctag Sordaria_fimicola_ ----------accaacagggattgccctagtaacggcgagtgaagccgcaacagctcaaatttgagatctggc-ttc---------ggcccgagttgtaatttgtagaggaaactttcg----g-tga-ggcac-cttctgagtcccttggaacagggcgccatagagggtgagagccccgtata-----gtcggatgccgatcc-aatgtaaagttccttcgacgagtcgagtagtttgggaatgctgctcaaaatgggaggtaaatttcttctaaagctaaatataggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgtttgtgaccagacttgcg-ccgttccgatcatccggtg----ttct-caccggtgcactcggggc-gg-ctcaggccagcatcggttttggtg-gggggataaaggtccagggaacgtag-c--tcctc----cgggagtgttatagccctg-ggcgtaatgccctc--gctgggaccgaggttcgcgca-tc---tgcaaggatgcttggcgtaaatggtcatc-aacgacccgtccttgaaacacggaccaaggag-tcaaggttttgcg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgagagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgta--ttcggatggatttgagtaagagcgttaagccttggacccgaaagatggtgaactatgcttggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatctgagcatgggggcgaaagactaatcgaaccatctag Codinaea_simplex_ ????????????????????attgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ccc--------aggcccgagttgtaatttgcagaggatgcttctg----g-caa-ggtgc-cttccaagtcccctggaacggggcgccgaagagggtgagagccccgtccg-----gtcggccaccaagcc-tgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaacgggaggtagaccccttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagtacgtgaaattgttgaaagggaagcgcttgtgaccagacgtgtg-ccggggtgctcagcgggcg----ttct-cgcccgtgcactcgcccc-gg-tacaggccagcgtcggttcgcgcg-gggggacaaaggcgccgggaacgtag-c--tcctc----cgggagtgttatagcccgg-cgtgccatgccccc--gcgcggaccgaggttcgcgct-cc----gcaaggacgc-tggcgtaa-tggtctcc-agcggcccgt-cttgaaacacggaccaaggag-tcgaggttttgcg---cgagtgtttgggtg-tcaaacccgcac-gcgt-aatgaaagtgaa-cgcaggtggg-agcttcggcgcaccaccgaccgatcctgatgtt--ttcggatggatttgagtaggagcgtagggcctcggacccgaaagatggtgaactatacgtggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatctgcgtatgggggcgaaagactaatcgaaccatctag Chaetosphaeria_innumera aggaaaagaaac?aacagggattgct?cagtaacggcgagtgaagcggccacagctcaaatttgaaatctggc-cccc--------ggcccgagttgtaatttgcagaggatgcttcgg----g-cgc-ggcgc-cttccaagtcccctggaacggggcgccacagagggtgagagccccgtacg-----gttggacgccaagcc-cgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtagaccccttctaaagctaaataccggctggagaccgatagcgcacaagtagagtgatcgaaagatgaaaagaactttgaa-aagagggttaaacagcacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccggggcgatcctctggcg----ttct-cgccagggcactcgcccc-gg-ggcaggccagcgtcggtttgggcg-ggcggacaagggcgtcgggcacgtag-c--tccct----cgggagtgttatagcccgg-cgcgcgatgctccc--gcccggaccgaggttcgcgct-ct----gcaaggacgc-tggcgtaa-tggtcacc-agcggcccgt-cttgaaacacggaccaaggag-tcgaggttctgcg---cgagtgtatgggtg-ccaaacccgcac-gcgc-aatgaaagtgaa-cgtaggtggg-agcctcggcgcaccaccgaccgatcctgatgtt--ctcggatggatttgagtaggagcgttgggcctcggacccgaaagatggtgaactatgcttggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatctgagcatgggggcgaaagactaatcgaaccatctag Cercophora_newfieldiana aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cccc-------aggcccgagttgtaatttgtagaggaagcttctg----g-tga-ggtac-ctgctgagtcccctggaacggggcgccatagagggtgagagccccgtata-----gcagagtaccgaccc-tatgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaatattggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgcttgtgatcagacttgcg-cccggcggatcatccggcg----ttct-cgccggtgcactccgccg-gg-ctcaggccagcatcggttctcgcg-gggggataaaggctcggggaacgtag-c--tcctc----cgggagtgttatagcccct-tgtgcaatgccctc--gcggggaccgaggttcgcgca-tc---tgcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcaaggttttgcg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgta--ttcggatggatttgagtaagagcgttaagccttggacccgaaagatggtgaactatgcttggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatctgagcatgggggcgaaagactaatcgaaccatctag Diaporthe_padi --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ctc---------ggcccgagttgtaatttgcagaggatgcttctg----g-cgc-ggtgc-cttccgagttccctggaacgggacgccacagagggtgagagccccgtatg-----gtcggacaccaagcc-tgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatctcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgaa-aagggggttaaatagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggctcatcagggg----ttct-cccctgtgcactccgccc-gg-ctcaggccagcatcggttctcgcg-gggggacaagaccgccgggaacgtag-c--acccccc--ggggtgtgttatagcccgg-cggacgataccctc--gcggggaccgaggttcgcgct-cc----gcaaggatgc-tggcgtaa-tggtcacc-agcgacccgt-cttgaaacacggaccaaggag-tcgtccattagag---cgagcgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ctcggaaggatttgagtaagagttttaacggacggacccgaaagacagtgaactatgcttgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgagcatgggggcgaaagactaatcgaactgtctag Diaporthe_pustulata --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ctc---------ggcccgagttgtaatttgcagaggatgcttctg----g-cgc-ggtgc-cttccgagttccctggaacgggacgccacagagggtgagagccccgtatg-----gtcggacaccaagcc-tgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatctcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgaa-aagggggttaaatagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggctcatcagggg----ttct-cccctgtgcactccgccc-gg-ctcaggccagcatcggttctcgcg-gggggacaagaccgccgggaacgtag-c--acccccc--ggggtgtgttatagcccgg-cggacgataccctc--gcggggaccgaggttcgcgct-cc----gcaaggatgc-tggcgtaa-tggtcacc-agcgacccgt-cttgaaacacggaccaaggag-tcgtccattagag---cgagcgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ctcggaaggatttgagtaagagttttaacggacggacccgaaagacagtgaactatgcttgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgagcatgggggcgaaagactaatcgaactgtctag Valsa_ambiens -------------aacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaagctggc-tta---------ggcccgcattgtaatttgcagaggatgcttctg----g-cga-ggtgc-cttccgagttccctggaacgggacgccatagagggtgagagccccgtatg-----gatggacaccagacc-tgtgtgaagctccttcaacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatctcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgaa-aagggggttaaacagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcagctcatcagggg----ttct-cccctgtgcactctgccc-gg-ctcaggccagcatcggttctcgtg-ggaggataagaacggtaggaacgtgg-c--ccccctccgggggggtgttatagcctgc-cgtacgatactccc--gtggggaccgaggttcgcgct-cc----gcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcgtccattagag---cgagcgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgtc--ttcggatggatttgagtaagagttttaacggacggacccgaaagacagtgaactatgcttgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgagcatgggggcgaaagactaatcgaactgtctag Leucostoma_niveum --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaagctggc-tcc---------ggcccgcattgtaatttgcagaggatgcttttg----g-cga-ggtgc-cttccgagttccctggaacgggacgccatagagggtgagagccccgtatg-----gatggacaccagacc-tgtgtaaagctccttcaacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatctcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgaa-aagggggttaaacagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcagctcatcagggg----ttct-cccctgtgcactctgccc-gg-ctcaggccagcatcggttctcgtg-ggaggataagaacagtgggaacgtgg-c--cccctctcgggggggtgttatagcccat-tgtacgatactctc--gtggggaccgaggttcgcgct-cc----gcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcgtccattagag---cgagcgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgtc--ttcggatggatttgagtaagagttttaacggacggacccgaaagacagtgaactatgcttgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgagcatgggggcgaaagactaatcgaactgtctag Conioscypha_japonica --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tg---cgagtgtacgggtg-caaagccctggc-gcgc-aatgaaagtgat-catgggtggg-agccttggcgcaccatcgaccgatcctgacgtttctacagatggatttgagtaagagcacactgggtctgacccgaaagaaggtgaactatgcatgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagaccaatcgaaccttctag Conioscypha_lignicola --gaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagcccagatttgaaatccggc-tctctt---gggggcccgagttgtaatctgcagatgggtcttttg----g-tga-agcgc-cgtccaagttccctggaatgggacgcctcagagggtgagagccccgtaca-----ggcggtcgccgagcc-tctgtaaagcccattcgacgagtcgagtagtttggaaatgctgctctaatcgcggggtaaacctcccgtaaggctaaataccggccagagaccgatagcgcacaagtagcgtgagcgaaagatgaaaagggccttgaacaagggcgtcaaaaagtatgtgaaattgttatgggggaagcgctcgatgccagactcggg-ggcggttggttacccggcg----gtcctcgccggcgcactctgccg-tc-cccgggccagcatcagttcggcgc-ggggcttactgcctcggggaacgtgg-c--tccct----cgggagtgttatagcctcg--tggcgacgccccg--tgccggactgaggaccgcgccttc--gggcctggatgc---tcgtaa-tggcccct-agcgacccgt-cttgaaacacggaccaaggag-ttgacctagcatg---cgagtgtacgggtg-taaagccctggc-gcgc-aatgaaagtgat-catgggtggg-agccctggcgcaccatcgaccgatcctgacgtctctacagatggatttgagtaagagcatgctgggtctgacccgaaagaaggtgaactatgcatgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagaccaatcgaaccttctag Conioscyphascus_varius aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagcccagatttgaaatccggc-tctcta---gggagcccgagttgtagtctgcagatgggtctttct----ggcgg-agcgc-cgtccaagttccctggaatgggacgccgtagagggtgagagccccgtacg-----gatggtcgccgagtctcttgtaaagcccattcgacgagtcgagtagtttggaaatgctgctcaaatcgcggggtaaacctcccgtaaggctaaataccggccagagaccgatagcgcacaagtagcgtgagcgaaagatgaaaagagccttgaacaagggcgtcaaaaagtatgtgaaattgttgtgggggaagcgcccgagaccagactcggt-ggcggttggttacccggcgagacccct-cgccggcgcactctgcc--gtccccgggccagcatcggttggacct-ggggcccaatgccgcgaggaacgtgg-c--tcccctc--ggggagtgttatagccacg--cggcgacgcccca--ggaccgaccgaggaccgcgctctc--gagcctggatgc---tcgtaa-tggtctct-agcgacccgt-cttgaaacacggaccaaggag-ttgacctggcatg---cgagtgtatgggtt-ccaagccctagc-gcgc-aatgaaagtga--tctgggtggg-atccccggcgcaccatcgaccgatcctgaagtt--tacggatggatttgagtaagagcatgccgggtctgacccgaaagaaggtgaactatgcatgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagaccaatcgaaccttctag Carpoligna_pleurothecii aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagcccagatttgaaatccggc-tttc-------gggcccgacttgtaatctgcagatgagtcttttg----g-cgg-agcgc-cgtccaagttccctggaacgggacgccggagagggtgagagccccgtacc-----gacgtgcgccgagtc-tttgcaaagctcattcgaagagtcgagtagtttggaaatgctgctcaaattgtggggtaaatctcccataaggctaaatactggccagagaccgatagcgcacaagtagcgtgagcgaaagatgaaaagagccttgaacaagggcgtcaaaaagcatgtgaaattgttgtgagggaagcgctcgatgccagacgtgga-ggcggttggttacccggcg----ttct-cgccggcgcactctgcc--gtctccaggccagcatcagttcggctt-ggggctcaatgcagttgggaacgtgg-c--tcttc------ggagtgttatagcccag--ctgcgacgtcctg--ggccggactgaggaacgcgca-tc---tgcccggatgc-tggcgtaa-tggcttct-agcgacccgt-cttgaaacacggaccaaggag-ttgacctaacatg---cgagtgtttgggtg-taaagccctcac-gcgc-agtgaaagcgaa-cgcaggtggg-agcttcggcgcaccatcgaccgatcctgaagtt--tacggatggatttgagtaagagcatgttgggtctgacccgaaagaaggtgaactatgcatgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagaccaatcgaaccttctag Ascotaiwania_sawada -------------aacaggggttgcc--agtaacggcgagtgaagcggcaacagcccagatttgaaatctggc-ctt-------ggtgcccgagttgtaatctggagatgggttttcca----g-cga-cgcgt-gcgccggatgccgtaga--gggatgccgtagagggtgagagccccgtact-----ggcg--cgactagct-tctttgttgcccattcgacgagtcgagtagtttggaaatgctgctctaatcgtggggtaaatctcccataaggctaaatatcggccggagaccgatagcgcacaagtaccgtgagcgaaagatgaaaagagccttggataagggcgtcaaaaagcatgtgaaattgttgtgggggaagcgctcgtcgccagtcgtgtc-ggcggctgatttgccggcg----ttct-cgcgggtgccctctgccc-gccgccaggccagcaccggctcggcct-ctgtcccaatgcacgcgggaacgtag-c--tccccac--ggggagtgttatagcccac--gtgcgacgccctg--ggccgggccgaggatcgcgca-tc---tgctcggatgc-tggcttaa-tggcgcct-agcgacccgt-cttgaaacacggaccaaggag-ttgccctggcgcg---cgagtgttcgggtg-taaagcccctac-gcgc-agtgaaagcgaa-cgcaggtggg-agtcctgatgcaccatcgaccgatcctgaagct--tgcagatggatttgagtaggagcgcgccgggtctgacccgaaagaaggtgaactatgcatgaa-agggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagcccaatcgaaccttctag Ascotaiwania_mitriformis -----------ccaacaggg-ttgcctcagtaacggcgagtgaagcggcaacagcccagatttgaaatctgac-ctcttt----ggggtccgagttgtaatctgcagatgggttttccg----g-tga-ggcgtgcgtccaagttccctggaatgggatgccggagagggtgagagccccgtaaa-----ggcgcgcgccgagcc-tctgtgaggcccattcgacgagtcgagtagtttggaaatgctgctctaatcgtggggtaaatctcccataaggctaaatatcggccggagaccgatagcgcacaagtagcgtgagcgaaagatgaaaagagccttggataaggccgtcaaaaagcatgtgaaattgttgtgggggaagcgctcgtcgccagacgtggc-ggcggctgatttaccggcg----tcct-cgccggtgtcctctgccc-gccgccaggccagcaccggctcggacc-ggggcccaaaacgcacgggaacgtgg-c--tcccctc--ggggagtgttatagcccgc---gcctacgccctg--ttccgggccgaggaacgcgca-tc---tgctcggatgcttggcctaa-tggcgcctaagcgacccgtccttgaaacacggaccaaggaggttgaccttgaccgcgccgattgttcgggtg-tcaagcccctac-gcgt-agtgaaagcgaa-cgctggtggg-agccctggtgcaccatcgaccgatcctgaagtt--tacggatggatttgagtaggagcgcgtcgggtctgacccgaaagaaggtgaactatgcatgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgtgcatgggggcgaaagaccaatcgaaccttctag Ophiostoma_piliferum aggaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cctc-------gggcccgagttgtaatttggagaggatgcttctg----g-cgc-ggcgc-cgtccgagttccttggaacaggacgccatagagggtgagagccccgtacg-----ggcggccgcctagcc-tttgcgaagctccttcgacgagtcgagtagtttgggaatgctgctcaaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagtacgtgaaattgttgaaagggaagcgcctgtgaccagacttgcg-gcccgcggatcatccggtg----ttcctcaccggtgcgctccgcg--ggccgcaggccagcatcggctctcctg-gggggacaaaggtcgcgggaacgtgg-c--tcctt----agggagtgttatagcccgc-ttcgtcatgcctcc--gggggggccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattgggg---cgagtgtctgggtg-ccaaacccgcac-gcga-aatgaaagtaaa-cgcaggtgag-agcttcggcgcatcaccgaccgatcctgatgtc--ttcggatggatttgagtaagagccttaccgcttggacccgaaagatggtgaactatgcctgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgggcatgggggcgaaagactaatcgaaccatctag Ophiostoma_africanum aggaaaagaaaccaacagggattgccccagtaacggcgagtgaagc-gcaacagctcaaatttgaaatctggc-tacatt--cagtggtccgagttgtaatttgtagaggatggttttg----g-cgc-ggcgc-cgtccgagttccttggaacaggacgccacagagggtgagagccccgtacg-----gacggacgcctagcc-tctacaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaatacg---cagaga-cgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaa-gctacgtgaaattgttgaaagggaagcgcctgtgaccagacttgcgcccccgtggaccacc--gcg----ttct-cgccggtgcactccgcgg-g--cgcaggccagcatcggttctccta-gggggacaaagaccgcgggaacgtag-c--tcttc-----gggagtgttatagcccgc-ggtggcatgcccct--ggggggaccgaggaccgcgct-tc---ggcaaggatgc--tgcgtaa-tggtcaca-ggacgcccgt-cttgaaacacggaccaaggag-ttcaacacttggg---cgagtgtatgggtg-ccaaacgc-cac-gcgcaaatgaaagtaaatcgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgtc--ttcggatggatttgagtaagagccttaccgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcatgggggcgaaagactaatcgaaccttctag Magnaporthe_grisea aggaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cccc-------cggcccgagttgtaatttgcagaggatgcttttg----g-tga-ggcac-ctaccgagtcccctggaatggggcgccatagagggtgagagccccgtatg-----gtaggacgccgaacc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ttcaggccagcatcggttttcgcc-gggggacaaaggcttcgggaacgtgg-c--tcctttc--ggggagtgttatagcccgt-tgcgtaataccccg--gcggggaccgacgaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggaaggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Gaeumannomyces_graminis_var._graminis --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cct--------aggcccgagttgtaatttgcagaggatgcttttg----g-caa-agcgc-ttaccgagtcccctggaacggggcgccacagagggtgagagccccgtatg-----gtatgacgccgagcc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgctcgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcggttttcgcc-gggggacaaaagcttcgggaacgtgg-c--tcccttc--ggggagtgttatagcccgt-tgcttaataccccg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Pseudohalonectria_suthepensis_ --gaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cccccg-----gggcccgagttgtaatttgcagaggatgctttcg----g-cga-ggccc-cttccgagtcccctggaacggggcgccagagagggtgagagccccgtacg-----gttggacgccgagcc-ggtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaatataggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgga-aagagggttaaacagtacgtgaaattgttgaaagggaagcgcttgtgaccagactcgcg-cccggcggatcatccggcg----ttct-cgccggtgcgctccgccg-gg-ctcgggccagcatcggtttcctcc-gggggataaaggcgccgggaacgtgg-c--tcccctc--ggggagtgttacagcccgg-cgcgcaatgccccg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcaagcattgggg---cgagtgtttgggtg-tcaaacccgcac-gcga-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgta--ttcggatggatttgagtaggagcctcaacgcttggacccgaaagatggtgaactatgcctgtatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatatgggcataggggcgaaagactaatcgaaccatctag Pseudohalonectria_lignicola_a ---------aaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggcccccc-------gggcccgagttgtaatttgcagaggatgcttttg----g-cgc-ggtcc-cctccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gtcggagaccaagcc-tttgtaaagctccctcgacgagtcgagtagtttgggaatgctgctcaaaatgggaggtaaatttcttctaaagctaaatactggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaacagcacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggatcatccagcg----ttctccgctggtgcactccgtcc-gg-ctcaggccagcatcggtctccggc-gggggacaaaagctccgggaacgtggcc--tctcctc---agaggtgttatagcccggctgcagaataccccgcctcggggaccgaggaccgcgccctccggggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcgagcattaggg---cgagtgtatgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtgggtgagaagctttgccgcatcatcgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgctcggacccgaaagatggtgaactatgcctggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Pseudohalonectria_lignicola_b aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggcccccc-------gggcccgagttgtaatttgcagaggatgcttttg----g-cgc-ggtcc-cctccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gtcggagaccaagcc-tttgtaaagctccctcgacgagtcgagtagtttgggaatgctgctcaaaatgggaggtaaatttcttctaaagctaaatactggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaacagcacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggatcatccagcg----ttctccgctggtgcactccgtcc-gg-ctcaggccagcatcggtctccggc-gggggacaaaagctccgggaacgtggcc--tcttctt--aagaggtgttatagcccggctgcagaataccccgcctcggggaccgaggaccgcgccctccggggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcgagcattaggg---cgagtgtatgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtgggtgagaagctttgccgcatcatcgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgctcggacccgaaagatggtgaactatgcctggatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Gaeumannomyces_cylindrosporus --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cct--------aggcccgagttgtaatttgcagaggatgcttttg----g-tga-ggtgc-ttaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gtttgacgccgagcc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgctcgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcggttttcgcc-gggggacaaaagcttcgggaacgtag-c--tcctctc--ggggagtgttatagcccgt-tgcataataccccg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatct-- Gaeumannomyces_graminis_var._avenae --gaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ccc--------aggcccgagttgtaatttgcagaggatgcttttg----g-caa-agcgc-ttaccgagtcccctggaacggggcgccacagagggtgagagccccgtatg-----gtaggacgccgagcc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgctcgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcggttttcgcc-gggggacaaaagcttcgggaacgtgg-c--tcccttc--ggggagtgttatagcccgt-tgcttaataccccg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Gaeumannomyces_graminis_var._tritici -------gaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ccc--------aggcccgagttgtaatttgcagaggatgcttttg----g-caa-agcgc-ataccgagtcccctggaacggggcgccacagagggtgagagccccgtatg-----gtacgacgccgagcc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgctcgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcggttttcgcc-gggggacaaaagcttcgggaacgtgg-c--tcccttc--ggggagtgttatagcccgt-cgtttaataccccg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Magnaporthe_salvinii aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cct--------aggcccgagttgtaatttgcagaggatgcttttg----g-tga-agcgc-ttaccgagtcccctggaacggggcgccacagagggtgagagccccgtatg-----gtttgacgccgagcc-tctgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaacgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaatagcacgtgaaattgttgaaagggaagcgctcgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcgattttcgcc-gggggacaaaagcttcgggaacgtgg-c--tctcttc--ggggagtgttatagcccgt-tgcgtaataccccg--gcggggatcgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Mycoleptodiscus_coloratus aggaaaagaaaccaacagggattgccctagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cccc-------cggcccgagttgtaatttgcagaggatgcttctg----g-tga-ggcac-ctaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gtcggacgccgaacc-tctgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcttgtgaccagactcggg-ctcgggggatcatccgccg----ttct-cgctggtgcactccgtcg-gg-ctcgggccagcatcggttttcctc-gggggacaaaggcttcgggaacgtgg-c--tcccttc--ggggagtgttatagcctgg-tgcgtcatgctccg--gcggggaccgaggaccgcgct-tc----ggcatgatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgc-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatgcttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_sp._CMU26633 ----------------------tgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cttc-------gggtccgagttgtaatttgcagaggatgcgttcg----g-cga-cgcac-tgaccgagtcccctggaatggggcgccatagagggtgagagccccgtatg-----gtcggctgctgaacc-ggtgtaatgctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggctggagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagcacgtgaaattgttgaaagggaagcgcctattaccagactctgt-tcttggggatcatccgtcc----ttct-gggcggtgcactcctctt-gg-atggggccagcatcggttttcgcc-gggggaaaaggactttgggaatgtgg-c--tcccctc--ggggagtgttatagccctc-tgtttgatgccccg--gcggggaccgaggaccgcgct-tc---ggcatggatgc-tggcgtaa-tggtaatc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattagtg---cgagtgtacgggtg-taaaacccgcac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgacgtt--ctctgacggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_commune_a --gaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cctc-------gggtccgagttgtaatttgcagaggatgcttcgg----g-cga-ggctt-tgatcgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagccgccgaacc-cgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcctatgaccagactcggg-ctcttgggatcatccgccc----ttct-gggcggtgcactccctcg-tt-ctcgggccagcatcggttctcctc-gggggataaaggcgccaggaacgtgg-c--tcccttc--ggggagtgttatagcctgg-cgcgtcatgctccg--ggggggaccgaggaccgcgct-tc---ggcatggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_commune_b -ggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cctc-------gggtccgagttgtaatttgcagaggatgcttcgg----g-cga-ggctt-tgatcgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagccgccgaacc-cgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcctatgaccagactcggg-ctcttgggatcatccgccc----ttct-gggcggtgcactccctcg-tt-ctcgggccagcatcggttctcctc-gggggataaaggcgccaggaacgtgg-c--tcccttc--ggggagtgttatagcctgg-cgcgtcatgctccg--ggggggaccgaggaccgcgct-tc---ggcatggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgctcgtcaaatttgggcataggggcgaaagactaatcgaacc------ Ophioceras_commune_c aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cctc-------gggtccgagttgtaatttgcagaggatgcttcgg----g-cga-ggctt-tgatcgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagccgccgaacc-cgtgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcctatgaccagactcggg-ctcttgggatcatccgccc----ttct-gggcggtgcactccctcg-tt-ctcgggccagcatcggttctcctc-gggggataaaggcgccaggaacgtgg-c--tcccttc--ggggagtgttatagcctgg-cgcgtcatgctccg--ggggggaccgaggaccgcgct-tc---ggcatggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_dolichostomum_a -ggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tccttt---cggggtccgagttgtaatttgcagaggatgctttcg----g-cga-ggcgc-tgaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagatgccaaacc-ggtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaatactggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagcacgtgaaattgttgaaagggaagcgcccatgaccagacttgat-ctcaggggatcatccgccg----ttct-cggcggtgcactcccctg-agcttcaggccagcatcggttctctcc-gggggataaaagcgctgggaacgtgg-c--tcctttc--gaggagtgttatagcccag-cgtacaatgctccg--ggggggaccgaggaccgcgcc-tt-agggcaaggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_dolichostomum_b -ggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tcctct---cggggtccgaattgtaatttgcagaggatgctttcg----g-aga-ggcgc-tgaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagatgccgaacc-ggtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcctatgaccagacttgat-ctcaggggatcacccgccg----ttct-cggcggtgcactcccctg-ggcttcaggccagcatcggttctctcc-gggggataaaagcgctgggaacgtgg-c--tcctctc--ggggagtgttatagcccag-cgtacaatgctccg--ggggggactgaggaccgcgcc-tt-agtgcaaggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagta--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_dolichostomum_c -ggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-t-cccttcagggggtccgagttgtaatttgcagaggatgcttttg----g-cga-agcgc-tgaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagatgctgaacc-agtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagcacgtgaaattgttgaaagggaagcgcctatgaccagacttgat-ctcaggggatcatccgccg----ttcttcggcggtgcactcctctg-agcttcaggccagcatcggttttctcc-gggggataaaagcgctgggaacgtgg-c--tcctttc--ggggagtgttatagcccag-cgtacaatgctccg--ggggggaccgaggaccgcgcc-tt-agggcaaggatgc-tggcgtaa-tggtcaccgggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtgttaaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_dolichostomum_d --gaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tccctttcagggggtccgagttgtaatttgcagaggatgctttcg----g-cga-ggcgc-tgaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagatgccgagcc-ggtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagagttaaaaagcacgtgaaattgttgaaagggaagcgcccatgaccagacctgat-ctcaggggatcacccgccg----ttct-cggcggtccactcccctgtgttttcaggccagcatcggttttctcc-gggggataaaagcgccgggaacgtgg-c--tcctctc--ggggagtgttatagcccgg-cgtataatgtctcg--ggggggaccgaggaccgcgcc-ttagttgcaaggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_hongkongense aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-tcctct--ccggggtccgagttgtaatttgcagaggatgcattcg----g-cga-ggcgc-tgaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----atcagatgccgaacc-ggtgtaatgctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagcacgtgaaattgttgaaagggaagcgcccatgaccagacttgat-ctcaggggatcatccgccg----ttct-cggcggtgcactcccctg-tgcttcaggccagcatcggttctctcc-gggggataaaagcgccgggaacgtgg-c--tcccttc--ggggagtgttatagcccgg-cgtacaatgctccg--gaggggaccgaggaccgcgccttc--gtgcaaggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtacgggtg-taaaacccgaac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgaagtc--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_leptosporum aggaaaagaaaccaacagggattgcctcagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cctc-------gggtccgagttgtaatttgcagaggatgcgttcg----g-cga-cgcac-tgaccgagtcccctggaatggggcgccatagagggtgagagccccgtatg-----gtcggctgctgaacc-ggtgtaatgctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagcacgtgaaattgttaaaagggaagcgcctgtgaccagactctgt-tcttggggatcatccgtcc----ttct-gggcggtgcactcctctt-gg-atggggccagcatcggttttcgcc-gggggaaaaggacttagggaacgtgg-c--tctcctc--ggagagtgttatagccctc-tgtttgatgccccg--gcggggaccgaggaccgcgct-tc---ggcatggatgc-tggcgtaa-tggtcacc-ggcgacccgt-cttgaaacacggaccaaggag-tcaagcattagtg---cgagtgtacgggtg-taaaacccgcac-gcgc-agtgaaagcgaa-cgctggtgag-agcttcggcgcatcaccgaccgatcctgacgtt--ctctgacggatttgagtaggagcattaacgcttgcacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Ophioceras_tenuisporum aggaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggcccccc-------gggcccgagttgtaatttgcagaggatgctttcg----g-tgc-ggccc-cttctgagtcccctggaatggggcgccacagagggtgagagccccgtata-----gtcggacgccaaacc-ggtgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaatataggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcaccttgaa-aagagggttaaacagtacgtgaaattgttgaaagggaagcgcttgtgaccagactcgcg-cccggcggatcatccagcg----ttct-cgctggtgcgctccgccg-gg-ctcgggccagcatcggtttccgcc-gggggacaaaggcgccgggaacgtgg-c--tccccta--ggggagtgttatagcccgg-cgtgcaatgccctg--gcggggaccgaggaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccaaggag-tcaagcattaggg---cgagtgtttgggtg-taaaacccgcac-gcga-aatgaaagtgaa-cgcaggtgag-agcttcggcgcatcatcgaccgatcctgatgta--ttcggatggatttgagtaggagccttaacgcttggacccgaaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgggcataggggcgaaagactaatcgaaccatctag Pyricularia_borealis --gaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-ccc--------aggcccgagttgtaatttgcagaggatgcttttg----g-cga-ggtcc-ctaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gttggacaccgaacc-tatgtaaagctccttcgacgagtcgagtagtttgggaatgctgctctaaacgggaggtaaatttcttctaaagctaaatactggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccgggcggatcatccagcg----ttct-cgctggtgcactccgccc-gg-ctcaggccagcatcggttttcgcc-gggggacaaaggcttcgggaacgtgg-c--tcccttc--ggggagtgttatagcccgt-cgcgtaataccccg--gcggggaccgacgaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtaaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgatgtt--ttcggatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatcta- Dactylaria_higginsii aggaaaagaaaccaacagggattgccccagtaacggcgagtgaagcggcaacagctcaaatttgaaatctggc-cacc-------cggcccgagttgtaatttgcagaggatgcttccg----g-cga-ggcac-ctaccgagtcccctggaatggggcgccacagagggtgagagccccgtatg-----gtaggacgccgagcc-gatgtgaagctccttcgacgagtcgagtagtttgggaatgctgctctaaatgggaggtaaatttcttctaaagctaaataccggccagagaccgatagcgcacaagtagagtgatcgaaagatgaaaagcactttgaa-aagagggttaaaaagtacgtgaaattgttgaaagggaagcgcttgtgaccagacttgcg-ccggccggatcatccagcg----ttct-cgctggtgcactccggcc-gg-ctcaggccagcatcggtttccgcc-gggggacaaaggcctcgggaacgtag-c--tcgctcc--ggcgagtgttatagcccgt-ggcgtaataccccg--gcggggaccgacgaccgcgct-tc---ggcaaggatgc-tggcgtaa-tggtcatc-agcgacccgt-cttgaaacacggaccgaggag-tcaagcattagtg---cgagtgtttgggtg-taaaacccgcac-gcgt-aatgaaagtgaa-cgtaggtgag-agcttcggcgcatcatcgaccgatcctgaagtc--ttctgatggatttgagtaggagcattaacgcttggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaggctcgcagcggttctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctag Xylaria_acuta -----------CCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-CTTC-------GGGTCCGAGTTGTAATTTGTAGAGGATGCTTTTG----G-CGC-GGTGC-CTTCCGAGTTCCCTGGAACGGGACGCCTTAGAGGGTGAGAGCCCCGTACG-----GTTGGACACTAAGCC-TCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAA-AAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGACCAGACCTTTT-CCTAGCGGATCATCCGGTG----TTTT-CACCGGTGCACTTCGCTA-GG-TTTAGGCCAGCATCGGTTTCCGTA-GGGGGATAAAAGCTCTGGGAACGTAG-C--TCCTC----CGGGAGTGTTATAGCCCTC-TGCATAATACCCTT--ACAGGGACCGAGGACCGCGCT-TC---GGCAAGGATGC-TGGCGTAA-TGGTCGTC-AACGACCCGT-CTTGAAACACGGACCAAGGAG-TCGAACATTTGTG---CGAGTGTTTGGGTG-TTAAACCCTCAC-GCGT-AATGAAAGTGAA-CGGAGGTGAG-AGCCCTGGTGCATCATCGACCGATCCTGATGTC--TTCGGATGGATTTGAGTAAGAGCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGGCGAAAGACTTATCGAACCATCTAG Xylaria_hypoxylon AGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-TTTC-------GGGTCCGAGTTGTAATTTGTAGAGGATGCTTTTG----G-CGC-GGTGC-CTTCCGAGTTCCCTGGAACGGGACGCCTTACAGGGTGAGAGCCCCGTACG-----GTTGGACACCAAGCC-TCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAA-AAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGACCAGACCTTTT-CTTAGCGGATCATCCGGTG----TTAT-CACCGGTGCACTTCGCTA-AG-TTTAGGCCAGCATCGGTTTCTGTA-GGGGGATAAAAGCCTTGGGAACGTAG-C--TCCTT----CGGGAGTGTTATAGCCCTT-TGCATAATACCCTT--CTGGGGACCGAGGACCGCGCTATA---TGCAAGGATGC-TGGCATAA-TGGTCGTC-AACGACCCGT-CTTGAA?CACGGACCAAGGAG-TCGAACATTTATG---CGAGTGTTTGGGTG-TTAAACCCTCACGGCGT-AATGAAAGTGAA-CGGAGGTGAG-AGCCCTGGTGCATCATCGACCGATCCTGATGTC--TTCGGATGGATTTGAGTAAGAGCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGGCGAAAGACTTATCGAACCATCTAG Hypocrea_Scheinitzii AGGAAAAGAAACCAACAGGGATTGCCCCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-CCCTC------GGGTCCGAGTTGTAATTTGTAGAGGATGCTTTTG----G-CAA-GGCGC-CGCCCGAGTTCCCTGGAACGGGACGCCACAGAGGGTGAGAGCCCCGTCTG-----GCTGGCCGCCGAGCC-TCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACCTTGAA-AAGAGGGTTAAATAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGTGACCAGACTTGGG-CGCGGCGGATCATCCGGGG----TTCT-CCCCGGTGCACTTCGCCG-TG-TCCAGGCCAGCATCAGTTCGTCGC-GGGGGAAAAAGGCTTCGGGAACGTGG-C--TCCCC----TGGGAGTGTTATAGCCCGT-TGCGTAATACCCTG--CGGTGGACTGAGGACCGCGCA-TC----TCAAGGATGC-TGGCGTAA-TGGTCACC-AGCGACCCGT-CTTGAAACACGGACCAAGGAG-TCGTCTTCGTATG---CGAGTGTTCGGGTG-TCAAACCCCTAC-GCGT-AATGAAAGTGAA-CGCAGGTGAG-AGCTTCGGCGCATCATCGACCGATCCTGATGTT--CTCGGATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGAAAGACTAATCGAACCTTCTAG Hypomyces_subiculosus_ AGGAAAAGAAACCAACAGGGATTGCCCCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-CCCT------AGGGCCCGAGTTGTAATTTGCAGAGGATGCTTTTG----G-CAA-GGCGC-CGCCCGAGTTCCCTGGAACGGGACGCCGCAGAGGGTGAGAGCCCCGTCTG-----GCTGGACGCCGAGCC-TTTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAA-AAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTCATGACCAGACTTGGG-CTTGGCGGATCATCCGGCG----TTCT-CGCCGGTGCACTTCGCCT-CG-CCCAGGCCAGCATCAGTTCGCCCC-GGGGGACAAAAGCTTCGGGAATGTGG-C--TCCTC----CGGGAGTGTTATAGCCCGT-GGCACAATACCCTG--GGGCGGACTGAGGTTCGCGCG-TC----CCAAGGATGC-TGGCGTAA-TGGTCATC-AGCGACCCGT-CTTGAAACACGGACCAAGGAG-TCGTCCTCGTATG---CGAGTGTTCGGGTG-TCAAACCCCTAC-GCGT-AATGAAAGTGAA-CGCAGGTGAG-AGCTTCGGCGCATCATCGACCGATCCTGATGTT--CTCGGATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGAAAGACTAATCGAACCTTCTAG Petriella_sordida AGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-TGCCTG---TGCAGTCCGAGTTGTAATTTGAAGAGGATGCTTTTG----G-CAA-GGTGC-CTTCCGAGTTCCCTGGAATGGGACGCCATAGAGGGTGAGAGCCCCGTATG-----GTCGGTCGCCGAGCC-TCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAACCCCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAA-AAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCGACCAGACTTGTG-CTCGTCGAATCAGCCGTCG----CTCGTCGGCGGCGCATTTCGGCG-GG-CTCAGGCCAGCATCAGTTCGCTGCAGGGGGAGAAAGGCGGTAGGAATGTGG-C--TCTTC------GGAGTGTTATAGCCTAC-CGTATAATACCCCT--CGGTGGACTGAGGACCGCGCA-TC----TCAAGGATGC-TGGCGTAA-TGGTTGTC-AGCGACCCGT-CTTGAAACACGGACCAAGGAG-TCGTCCTAATATG---CGAGTGTTCGGGTG-TAAAACCCCTAC-GCGT-AATGAAAGTGAA-CGGAGGTGAG-AGCTTCGGCGCATCATCGACCGATCCTGATGTT--CTCGGATGGATTTGAGTATGAGCATATTGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTAAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGAAAGACTAATCGAACCTTCTAG Petriella_setifera AGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGC-TGCCTG---TGCAGTCCGAGTTGTAATTTGAAGAGGATGCTTTTG----G-CAA-GGTGC-CTTCCGAGTTCCCTGGAATGGGACGCCATAGAGGGTGAGAGCCCCGTATG-----GTCGGTCGCCGAGCC-TCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAACCCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAA-AAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCGACCAGACTTGTG-CTCGTCGAATCAGCCGTCG----CTCGTCGGCGGCGCATTTCGGCG-GG-CTCAGGCCAGCATCAGTTCGCTGT-GGGGGAGAAAGGCGGTAGGAATGTGG-C--TCCTC------GGAGTGTTATAGCCTAC-CGTATAATACCCCT--CGGCGGACTGAGGACCGCGCA-TC----TCAAGGATGC-TGGCGTAA-TGGTTGTC-AGCGACCCGT-CTTGAAACACGGACCAAGGAG-TCGTCCTAATATG---CGAGTGTTCGGGTG-TCAAACCCCTAC-GCGT-AATGAAAGTGAA-CGGAGGTGAG-AGCTTCGGCGCATCATCGACCGATCCTGATGTT--CTCGGATGGATTTGAGTATGAGCATATTGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTAAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGAAAGACTAATCGAACCTTCTAG Ascotaiwania_lignicola ------------CAACA-----------------------------------AGCTCAAATTTGAAATCTGGCGCCTCTTGCGGGGGGTCCGAGTTGTAATCTGCAGATGAGTCTTCCG----G-CGA-CGCGAGCGCCCAAGTTCCCTGGAATGGGACGCCATAGAGGGTGAGAGCCCCGTACT-----GGCGTGCGCCGAGCC-TCTGTGAAGCTCATTCGACGAGTCGAGTAGTTTGGAAATGCTGCTCTAATCGTGGGGTAAATCTCCCATAAGGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGCGTGAGCGAAAGATGAAAAGAGCCTTGAACAAGGGCGTTAAAAAGTATGTGAAATTGTTGTGGGGGAAGCGCTTGTCGCCAGACGTGGC-GGCGGCGGGTTACCCGGC-----TTCT-GGCCGGCGCACTCCGCCC-GCCGCCAGGCCAGCAACGACTCCGGCTCGGGACCCAGTGCCGGCGGGAACGTAG-C--TCCTTC---GGGGAGTGTTACAGCCCAC--CGGTGGCGTCCTG--GCCTGGGTCGAGGTTAGCGCA-TC---TGCCCGGATGC-TGGCTTAA-TGGCGCCA-AACGACCCGT-CTTGAAACACGGACCAAGGAG-TTGACCTAGCGCG---CGAGTGTACGGGTG-TCAAGCCCCTAC-GCGC-AGTGAAAGCAAA-CGGTGGTGGG-AGCTCTGGCGCACCATCGACCGATCCTGAAGTT--CACGGATGGATTTGAGTAGGAGCGTGCTGGGTCTGACCCGAAAGAAGGTGAACTATGCATGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGTGCATGGGGGCGAAAGACCAATCGAACCTTCTAG ; END; BEGIN TREES; Title Conioscypha_peruensis_ML_tree; LINK Taxa = Taxa; TRANSLATE 1 Conioscypha_peruensis, 2 Setosphaeria_monoceras_, 3 Pleospora_herbarum_, 4 Dothidea_sambuci_, 5 Chaetomium_globosum_, 6 Sordaria_fimicola_, 7 Codinaea_simplex_, 8 Chaetosphaeria_innumera, 9 Cercophora_newfieldiana, 10 Diaporthe_padi, 11 Diaporthe_pustulata, 12 Valsa_ambiens, 13 Leucostoma_niveum, 14 Conioscypha_japonica, 15 Conioscypha_lignicola, 16 Conioscyphascus_varius, 17 Carpoligna_pleurothecii, 18 Ascotaiwania_sawada, 19 Ascotaiwania_mitriformis, 20 Ophiostoma_piliferum, 21 Ophiostoma_africanum, 22 Magnaporthe_grisea, 23 Gaeumannomyces_graminis_var._graminis, 24 Pseudohalonectria_suthepensis_, 25 Pseudohalonectria_lignicola_a, 26 Pseudohalonectria_lignicola_b, 27 Gaeumannomyces_cylindrosporus, 28 Gaeumannomyces_graminis_var._avenae, 29 Gaeumannomyces_graminis_var._tritici, 30 Magnaporthe_salvinii, 31 Mycoleptodiscus_coloratus, 32 Ophioceras_sp._CMU26633, 33 Ophioceras_commune_a, 34 Ophioceras_commune_b, 35 Ophioceras_commune_c, 36 Ophioceras_dolichostomum_a, 37 Ophioceras_dolichostomum_b, 38 Ophioceras_dolichostomum_c, 39 Ophioceras_dolichostomum_d, 40 Ophioceras_hongkongense, 41 Ophioceras_leptosporum, 42 Ophioceras_tenuisporum, 43 Pyricularia_borealis, 44 Dactylaria_higginsii, 45 Xylaria_acuta, 46 Xylaria_hypoxylon, 47 Hypocrea_Scheinitzii, 48 Hypomyces_subiculosus_, 49 Petriella_sordida, 50 Petriella_setifera, 51 Ascotaiwania_lignicola; TREE Imported_tree_0 = (4:0.037008082874859995,((2:0.005542536239234714,3:0.0049119807557760934):0.13268652766564384,((45:1.2866388144329902E-4,46:0.023917930241777952):0.0639429022229224,((((47:0.02412183643680378,48:0.02889120448809498):0.02044554779810046,(49:0.0053190414161678615,50:0.0012517556042528695):0.09178672316964143):0.01993213675967798,(((1:0.05994705206550791,16:0.02522455191399403):0.038753259966943496,(14:0.036461436321403626,15:0.0015185058541357442):0.042605704747304796):0.04458376759122388,(17:0.04248923171014322,(51:0.0670705214867658,(18:0.07619371250148785,19:0.0481888683172785):0.040036347016384):0.060391236871154184):0.01570216192905473):0.23413026553196117):0.052831655423250135,((20:0.041085401129666604,21:0.059606559266434087):0.04735093336194843,((((10:1.26913382035967E-6,11:1.26913382035967E-6):0.009066595235711492,(12:0.007110834464851271,13:0.011931491948659806):0.03913333671471398):0.07733418031055325,((7:0.043767386414749615,8:0.05250091721305217):0.0618361703156225,(9:0.03513652195739565,(5:0.009279047982596773,6:0.04740276254834513):0.0163195302590192):0.016602545637791163):0.0167773021218613):0.016882054231500253,(((24:0.024380692284133466,42:0.01081143259489005):0.026184460417357346,(25:1.26913382035967E-6,26:0.0026360003523287013):0.05551465200292617):0.006818945923561678,(((43:0.01149900319400132,(22:0.006227281201833279,44:0.027871480056605176):0.003008390670443538):0.002647490215213202,(27:0.006955109200073843,(30:0.005632904116242029,(23:1.26913382035967E-6,(28:0.0011707571616297358,29:0.005089266955225043):0.0016941921155749064):0.005081270827411745):0.00258138592880011):0.01297947072948304):0.012119285082272956,(31:0.01981956424908108,((32:0.009501654814095931,41:0.008004012084532004):0.053445354075198355,((34:0.001319420339374929,(33:1.26913382035967E-6,35:1.26913382035967E-6):1.26913382035967E-6):0.030472321137702686,(40:0.005187792470670871,((36:0.005692307152680717,38:0.011708795118157094):0.0016132037792870554,(37:0.006752746863932331,39:0.023804446853782302):0.0050628396414067875):0.007564878717046052):0.027782925850273595):0.024431039461493536):0.048506136636442695):0.017053478725900517):0.011492490534801982):0.018046817254750224):0.015064254350719928):0.010610473394765034):0.03269494522219133):0.125315728931733):0.037008082874859995); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 922; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 922; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 922; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1387406751554; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4543772737762666942; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2196379009361520523; mqVersion 275; checksumv 0 3 1854816261 null getNumChars 922 numChars 922 getNumTaxa 51 numTaxa 51 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 830557.0 sumSquares -4.489476338939062E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 372; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 792 467; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4543772737762666942 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4543772737762666942; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 288; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 400; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4543772737762666942 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1344.1387403092087.8454052903778179211; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 400; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2196379009361520523 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 400; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;