#NEXUS [written Wed Nov 08 14:33:48 EST 2017 by Mesquite version 3.31 (build 859) at Bennu.fios-router.home/192.168.1.156] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=85; TAXLABELS 'Vigna unguiculata C35031083-processed0.0' 'Oryza sativa OsWRKY82 NT' 'Vigna unguiculata scaffold53935-processed0.0 NT' 'Vigna unguiculata C35020760-augustus0.1 NT' 'Vigna unguiculata C35083824-augustus0.3 NT' 'Vigna unguiculata C35083824-0.2_ORF+1 NT' 'Vigna unguiculata C35075056-augustus0.1 NT' 'Vigna unguiculata scaffold93568-augustus0.1 NT' 'Oryza sativa OsWRKY71' 'Arabidopsis thaliana AtWRKY40' 'Vigna unguiculata scaffold43215-augustus0.2' 'Vigna unguiculata scaffold59202-augustus0.1' 'Vigna unguiculata scaffold58860-augustus0.1' 'Vigna unguiculata scaffold4700-augustus0.3' 'Vigna unguiculata scaffold63072-0.0' 'Vigna unguiculata scaffold16279-augustus0.5' 'Vigna unguiculata scaffold58478-processed0.0' 'Arabidopsis thaliana AtWRKY50' 'Vigna unguiculata scaffold66921-0.1' 'Vigna unguiculata scaffold86127-augustus0.1' 'Vigna unguiculata scaffold90973-augustus0.1' 'Vigna unguiculata scaffold29982-processed0.2' 'Vigna unguiculata scaffold2619-augustus0.2' 'Vigna unguiculata scaffold2161-augustus0.5' 'Vigna unguiculata scaffold89209-0.0' 'Oryza sativa OsWRKY23' 'Vigna unguiculata scaffold93858-processed0.0' 'Vigna unguiculata scaffold2024-augustus0.2' 'Oryza sativa OsWRKY46' 'Vigna unguiculata scaffold73463-0.1_ORF+1' 'Vigna unguiculata scaffold90447-0.1' 'Vigna unguiculata scaffold95149-processed0.0' 'Vigna unguiculata scaffold26172-augustus0.1' 'Vigna unguiculata C35072274-augustus0.1' 'Vigna unguiculata scaffold10361-augustus0.3' 'Vigna unguiculata C35064493-augustus0.2' 'Vigna unguiculata scaffold62008-0.1_ORF-3' 'Arabidopsis thaliana AtWRKY54' 'Vigna unguiculata scaffold94837-processed0.0' 'Vigna unguiculata scaffold89993-0.0' 'Vigna unguiculata scaffold88185-augustus0.3' 'Arabidopsis thaliana AtWRKY72' 'Vigna unguiculata scaffold32826-processed0.1' 'Vigna unguiculata scaffold37976-0.1' 'Oryza sativa OsWRKY27' 'Vigna unguiculata C35084108-augustus0.1' 'Vigna unguiculata C35066409-augustus0.1' 'Vigna unguiculata scaffold70584-0.1' 'Vigna unguiculata scaffold33087-0.0' 'Oryza sativa OsWRKY2' 'Vigna unguiculata scaffold42631-0.0_ORF+1' 'Vigna unguiculata scaffold42631-augustus0.2' 'Arabidopsis thaliana AtWRKY65' 'Vigna unguiculata scaffold46551-augustus0.4' 'Vigna unguiculata scaffold60128-processed0.0' 'Oryza sativa OsWRKY68' 'Vigna unguiculata scaffold5329-augustus0.1' 'Vigna unguiculata scaffold60168-augustus0.1' 'Vigna unguiculata scaffold4444-augustus0.2' 'Vigna unguiculata scaffold4444-0.1_ORF+1' 'Vigna unguiculata scaffold81313-0.1_ORF+1' 'Vigna unguiculata scaffold81313-augustus0.2' 'Vigna unguiculata scaffold94471-augustus0.2' 'Vigna unguiculata C35036421-augustus0.2' 'Arabidopsis thaliana AtWRKY74' 'Vigna unguiculata scaffold89014-processed0.1' 'Oryza sativa OsWRKY82 CT' 'Vigna unguiculata scaffold87788-augustus0.3' 'Vigna unguiculata scaffold21114-augustus0.2' 'Vigna unguiculata scaffold94441-augustus0.1 CT' 'Vigna unguiculata scaffold95108-augustus0.1 CT' 'Vigna unguiculata scaffold38934-augustus0.2 CT' 'Vigna unguiculata scaffold9384-processed0.0 CT' 'Vigna unguiculata scaffold53935-processed0.0 CT' 'Vigna unguiculata scaffold93568-augustus0.1 CT' 'Vigna unguiculata scaffold6727-0.0' 'Vigna unguiculata C35083824-augustus0.3 CT' 'Arabidopsis thaliana AtWRKY20 CT' 'Vigna unguiculata scaffold85153-augustus0.2 CT' 'Vigna unguiculata C35037167-0.1' 'Vigna unguiculata scaffold1454-processed0.1' 'Vigna unguiculata scaffold94441-augustus0.1 NT' 'Arabidopsis thaliana AtWRKY20 NT' 'Vigna unguiculata scaffold85153-augustus0.2 NT' 'Vigna unguiculata scaffold9384-processed0.0 NT' ; END; BEGIN TREES; Title Cowpea_WRKY; ID 015f9d1fc4d724; LINK Taxa = Taxa; TRANSLATE [0] 1 'Vigna unguiculata C35031083-processed0.0', [1] 2 'Oryza sativa OsWRKY82 NT', [2] 3 'Vigna unguiculata scaffold53935-processed0.0 NT', [3] 4 'Vigna unguiculata C35020760-augustus0.1 NT', [4] 5 'Vigna unguiculata C35083824-augustus0.3 NT', [5] 6 'Vigna unguiculata C35083824-0.2_ORF+1 NT', [6] 7 'Vigna unguiculata C35075056-augustus0.1 NT', [7] 8 'Vigna unguiculata scaffold93568-augustus0.1 NT', [8] 9 'Oryza sativa OsWRKY71', [9] 10 'Arabidopsis thaliana AtWRKY40', [10] 11 'Vigna unguiculata scaffold43215-augustus0.2', [11] 12 'Vigna unguiculata scaffold59202-augustus0.1', [12] 13 'Vigna unguiculata scaffold58860-augustus0.1', [13] 14 'Vigna unguiculata scaffold4700-augustus0.3', [14] 15 'Vigna unguiculata scaffold63072-0.0', [15] 16 'Vigna unguiculata scaffold16279-augustus0.5', [16] 17 'Vigna unguiculata scaffold58478-processed0.0', [17] 18 'Arabidopsis thaliana AtWRKY50', [18] 19 'Vigna unguiculata scaffold66921-0.1', [19] 20 'Vigna unguiculata scaffold86127-augustus0.1', [20] 21 'Vigna unguiculata scaffold90973-augustus0.1', [21] 22 'Vigna unguiculata scaffold29982-processed0.2', [22] 23 'Vigna unguiculata scaffold2619-augustus0.2', [23] 24 'Vigna unguiculata scaffold2161-augustus0.5', [24] 25 'Vigna unguiculata scaffold89209-0.0', [25] 26 'Oryza sativa OsWRKY23', [26] 27 'Vigna unguiculata scaffold93858-processed0.0', [27] 28 'Vigna unguiculata scaffold2024-augustus0.2', [28] 29 'Oryza sativa OsWRKY46', [29] 30 'Vigna unguiculata scaffold73463-0.1_ORF+1', [30] 31 'Vigna unguiculata scaffold90447-0.1', [31] 32 'Vigna unguiculata scaffold95149-processed0.0', [32] 33 'Vigna unguiculata scaffold26172-augustus0.1', [33] 34 'Vigna unguiculata C35072274-augustus0.1', [34] 35 'Vigna unguiculata scaffold10361-augustus0.3', [35] 36 'Vigna unguiculata C35064493-augustus0.2', [36] 37 'Vigna unguiculata scaffold62008-0.1_ORF-3', [37] 38 'Arabidopsis thaliana AtWRKY54', [38] 39 'Vigna unguiculata scaffold94837-processed0.0', [39] 40 'Vigna unguiculata scaffold89993-0.0', [40] 41 'Vigna unguiculata scaffold88185-augustus0.3', [41] 42 'Arabidopsis thaliana AtWRKY72', [42] 43 'Vigna unguiculata scaffold32826-processed0.1', [43] 44 'Vigna unguiculata scaffold37976-0.1', [44] 45 'Oryza sativa OsWRKY27', [45] 46 'Vigna unguiculata C35084108-augustus0.1', [46] 47 'Vigna unguiculata C35066409-augustus0.1', [47] 48 'Vigna unguiculata scaffold70584-0.1', [48] 49 'Vigna unguiculata scaffold33087-0.0', [49] 50 'Oryza sativa OsWRKY2', [50] 51 'Vigna unguiculata scaffold42631-0.0_ORF+1', [51] 52 'Vigna unguiculata scaffold42631-augustus0.2', [52] 53 'Arabidopsis thaliana AtWRKY65', [53] 54 'Vigna unguiculata scaffold46551-augustus0.4', [54] 55 'Vigna unguiculata scaffold60128-processed0.0', [55] 56 'Oryza sativa OsWRKY68', [56] 57 'Vigna unguiculata scaffold5329-augustus0.1', [57] 58 'Vigna unguiculata scaffold60168-augustus0.1', [58] 59 'Vigna unguiculata scaffold4444-augustus0.2', [59] 60 'Vigna unguiculata scaffold4444-0.1_ORF+1', [60] 61 'Vigna unguiculata scaffold81313-0.1_ORF+1', [61] 62 'Vigna unguiculata scaffold81313-augustus0.2', [62] 63 'Vigna unguiculata scaffold94471-augustus0.2', [63] 64 'Vigna unguiculata C35036421-augustus0.2', [64] 65 'Arabidopsis thaliana AtWRKY74', [65] 66 'Vigna unguiculata scaffold89014-processed0.1', [66] 67 'Oryza sativa OsWRKY82 CT', [67] 68 'Vigna unguiculata scaffold87788-augustus0.3', [68] 69 'Vigna unguiculata scaffold21114-augustus0.2', [69] 70 'Vigna unguiculata scaffold94441-augustus0.1 CT', [70] 71 'Vigna unguiculata scaffold95108-augustus0.1 CT', [71] 72 'Vigna unguiculata scaffold38934-augustus0.2 CT', [72] 73 'Vigna unguiculata scaffold9384-processed0.0 CT', [73] 74 'Vigna unguiculata scaffold53935-processed0.0 CT', [74] 75 'Vigna unguiculata scaffold93568-augustus0.1 CT', [75] 76 'Vigna unguiculata scaffold6727-0.0', [76] 77 'Vigna unguiculata C35083824-augustus0.3 CT', [77] 78 'Arabidopsis thaliana AtWRKY20 CT', [78] 79 'Vigna unguiculata scaffold85153-augustus0.2 CT', [79] 80 'Vigna unguiculata C35037167-0.1', [80] 81 'Vigna unguiculata scaffold1454-processed0.1', [81] 82 'Vigna unguiculata scaffold94441-augustus0.1 NT', [82] 83 'Arabidopsis thaliana AtWRKY20 NT', [83] 84 'Vigna unguiculata scaffold85153-augustus0.2 NT', [84] 85 'Vigna unguiculata scaffold9384-processed0.0 NT'; TREE Cowpea_WRKY = ((1:1.9690425054252785,2:0.14083984095381105):0.18339625963661654,(3:0.00000100000050002909,(((4:0.2357221476155354,((5:0.00000100000050002909,6:0.4444591251834038):0.3257683604083565,7:0.07588140342871628):0.26389366597756225):0.3103010717295853,8:0.038525434659900215):0.3380544154708237,(((((9:0.5402695072501257,(10:0.3026842930211638,(11:0.16404896721811937,((12:0.2605411583313806,13:0.2166581097908676):0.45516877257729277,14:0.04573579514494218):0.07987041243513153):0.04647965075146102):0.2821643389422975):0.08676052607506925,(15:0.599578783151766,16:1.2094776801305895):0.0806347773683964):0.2706152667986502,((((17:0.7990705698377266,((18:0.6027184598079467,19:0.15980774913670462):0.08801349289244534,20:0.23317924816172964):0.31103367150813693):0.36966729396525916,((21:0.00000100000050002909,(22:0.09626835350705404,23:0.00000100000050002909):0.28028503105649116):0.4602604166587559,24:0.8707817275837996):0.00000100000050002909):0.19496961155829656,(((25:0.5297174674804908,26:0.09797669161338748):0.19376937863491966,(27:0.00000100000050002909,28:0.7157409085939502):0.3643060028660446):0.9491998605274016,(29:3.5510992342523844,((30:1.0170125502377128,((31:0.4377797695863313,32:2.833389199985722):0.163692556488625,((33:0.17273195316141923,(34:0.894234672316364,35:0.11958690209275605):0.00000100000050002909):0.3229363934887544,(36:0.15940437899523344,37:3.6076745681223756):0.00000100000050002909):0.39361928979851424):0.5294417427077285):0.00000100000050002909,38:1.0904483209447668):0.00000100000050002909):1.543317254270919):0.2775282880006823):0.5665119335473957,((39:0.00000100000050002909,((40:0.18296725820152404,41:0.00000100000050002909):0.10355154499916293,((42:0.00000100000050002909,(43:1.031016033815858,44:0.00000100000050002909):0.17806250546645508):0.3114909937137365,((45:1.0904841397963627,46:0.036829279675278694):0.061127315800123275,47:0.33498878422479766):0.11664105627008485):0.07314892083156624):0.16439194386255213):0.5258896260205638,((((48:0.8964885005910195,((49:0.5328183303793861,50:0.00000100000050002909):0.32115659882617453,(51:0.00000100000050002909,(52:0.5516788432927964,((53:0.23450769798426707,54:0.00000100000050002909):0.38650741837829,55:0.9004928535264016):1.0238547417955148):0.12209537786888526):0.4236774923579845):0.3840096495615162):0.3986376453197364,(((56:0.14143260024238247,((57:0.21688749101460397,58:0.00000100000050002909):0.03257996588580352,((59:0.2399460214926389,60:0.00000100000050002909):0.00000100000050002909,(61:0.00000100000050002909,62:0.03818328466846577):0.1923666779583146):0.20419781642279597):0.08738895401436791):0.27449514091911503,63:0.1727382699459646):0.1557881542147673,(64:0.00000100000050002909,(65:0.23510687123035692,66:0.07199885699687854):0.2554855268140982):0.057440017070570525):0.20173383789249244):0.9486759207119487,67:0.528386372015052):0.42079710205125304,(68:0.6738028221711635,(((69:0.00000100000050002909,70:0.3568544931027123):0.00000100000050002909,(((71:0.6346373183314207,72:0.00000100000050002909):0.07815618754232474,(73:0.00000100000050002909,(74:0.06734610236937738,75:0.04428188927629696):0.07507525677389884):0.14800577971561535):0.1290236879305402,(76:1.4321273995362285,77:0.00000100000050002909):0.25710960338980177):0.00000100000050002909):0.046831714207461565,(78:0.00000100000050002909,(79:0.00000100000050002909,80:0.08239889438464851):0.2865262920572681):0.22942757997165678):0.00000100000050002909):0.3501171242934689):0.32826344840430177):0.2072491644827745):0.1527276997571283):0.9584039455088191,81:2.0036764955393696):0.6752309264988166,(82:0.1800446364099622,(83:0.7617336020836715,84:0.7987097663063235):0.8356982775397758):0.09802222744993658):0.0792697515221045):0.277050546666291):0.33309817883338266,85:1.213777820568436)OROOT; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1510169628475; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7506467454919976328; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; endTell; end;