#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=44; TAXLABELS Doronicum_carpetanum_carpetanum_Acc_1 Doronicum_pardalianches_Acc_1 Doronicum_pardalianches_Acc_2 Doronicum_cataractarum_Acc_1 Doronicum_cataractarum_Acc_2 Doronicum_orientale_Acc_1 Doronicum_altaicum_Acc_1 Doronicum_altaicum_Acc_2 Doronicum_columnae_Acc_1 Doronicum_carpetanum_carpetanum_Acc_2 Doronicum_carpetanum_carpetanum_Acc_3 Doronicum_carpetanum_diazii_Acc_1 Doronicum_carpetanum_diazii_Acc_2 Doronicum_carpetanum_kuepferi_Acc_1 Doronicum_carpetanum_pubescens_Acc_1 Doronicum_carpetanum_pubescens_Acc_3 Doronicum_carpetanum_pubescens_Acc_5 Doronicum_falconeri_Acc_1 Doronicum_plantagineum_plantgineum_Acc_1 Doronicum_reticulatum_Acc_2 Doronicum_macrophyllum_macrophyllum_Acc_1 Doronicum_macrophyllum_macrophyllum_Acc_3 Doronicum_gansuense_Acc_1 Doronicum_falconeri_Acc_2 Doronicum_dolichotrichum_Acc_1 Doronicum_dolichotrichum_Acc_2 Doronicum_cacaliifolium_Acc_1 Doronicum_briquetti_Acc_1 Doronicum_austriacum_Acc_1 Doronicum_carpaticum_Acc_1 Doronicum_columnae_Acc_2 Doronicum_orientale_Acc_2 Doronicum_grandiflorum_Acc_1 Doronicum_orientale_Acc_3 Doronicum_hungaricum_Acc_2 Doronicum_glaciale_glaciale_Acc_1 Doronicum_stiriacum_Acc_3 Doronicum_glaciale_calcareum Doronicum_clusii_Acc_1 Doronicum_grandiflorum_Acc_2 Doronicum_austriacum_Acc_3 Doronicum_corsicum_Acc_2 Abrotanella_linearis Abrotanella_fertilis ; END; BEGIN CHARACTERS; TITLE nuclear_A25_locus; DIMENSIONS NCHAR=425; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Doronicum_carpetanum_carpetanum_Acc_1 AGAGATCCTGCCAAGTATTTBTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_pardalianches_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAACCATCAAAAGTTTATGAGTTCACAGTGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAATGAGTACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAACACACCTTGTAAATTCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAA-------GCTAT-AATAAGAAATATCTGGAAA--AAAAGTAAAGTAAAATTAACGTGTGGACAATAAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_pardalianches_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAACCATCAAAAGTTTATGAGTTCACAGTGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAATGAGTACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAACACACCTTGTAAATTCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAA-------GCTAT-AATAAGAAATATCTGGAAA--AAAAGTAAAGTAAAATTAACGTGTGGACAATAAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_cataractarum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCAAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_cataractarum_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCAAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_orientale_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AWAAAAATCAAGTARAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAMCAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_altaicum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAACCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAACAACATT-TATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAACACACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------AATAT-AATAATAAATATTTAAAAAA-GAAAGTCGAGAAAGATTCSTGTGTTGAAAATAAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_altaicum_Acc_2 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_columnae_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAGATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAACGAAAAGTCTAGTAGAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_carpetanum_Acc_2 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGTTAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_carpetanum_Acc_3 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_diazii_Acc_1 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTTAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAAC--GTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_diazii_Acc_2 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_kuepferi_Acc_1 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAGGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_pubescens_Acc_1 AGAGATCCTGCCAAGTATTTTTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACACTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_pubescens_Acc_3 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGTTAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpetanum_pubescens_Acc_5 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACACTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_falconeri_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAACCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAACAACATT-TATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------ATTAT-AATAATAAATATTTAAAAAA-GAAAGTCGAGAAAGATTCGTGTGTTGAAAATAAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_plantagineum_plantgineum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGCGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_reticulatum_Acc_2 AGATATCCTGCCAAGTATTTGTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAGATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAAGGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAACAAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAA??????????????????????????????? Doronicum_macrophyllum_macrophyllum_Acc_1 ?????????????????????TGCACGATCTTTGTTCTAACAAGAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_macrophyllum_macrophyllum_Acc_3 AGATATCCTGCCAAGTATTTTTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------MCTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_gansuense_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_falconeri_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_dolichotrichum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATATTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTARAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGWCAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_dolichotrichum_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAA-CAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGAGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_cacaliifolium_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGAAAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_briquetti_Acc_1 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAAAACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTATGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_austriacum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_carpaticum_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAGATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTRGAAACGAAAAGTCGAGTAAAATGAACGCGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_columnae_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAGATGGTCAAAA-AAGTGAATTCCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAAGGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAGTAATAAGAAATATTTGGAAACAAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_orientale_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_grandiflorum_Acc_1 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_orientale_Acc_3 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAAACATCAAAAGTTTATGAGTTCACAATGG----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAATGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGAAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAA------ACTAT-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATTAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_hungaricum_Acc_2 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGCGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_glaciale_glaciale_Acc_1 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_stiriacum_Acc_3 AGATATCCTGCCAGGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_glaciale_calcareum AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAATGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAACTAAAAAAAATCAAGTAGAAATGAAAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_clusii_Acc_1 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATC----------GAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-TAAGAATTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_grandiflorum_Acc_2 AGAGATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAAC-AAATCATCAAAGGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAAAAACGTTAAATGGTCAAAA-AAGTGAATACCAACATTGT-CAAGAACTAAAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------GTTAG-AATAAGAAATATTTGGAAAAGAAAAGTCGAGTAAAATTAACGTGTGGACAATAAAATAAGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_austriacum_Acc_3 AGATATCCTGCCAAGTATTTCTGCACGATCTTTGTTCTAACAAAACCATCAAAAGTTTATGAGTTCACAATGA----------------------------------------------------------------AACAACAACATT-TATGGTCAAAA-AAGTGAATACCAACATTAT-TAAGAACT-AAAAAAATCAAGTAGAAATGATAACGCACCTTGTAAATGCCTGATCTATGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAATAATGCATTTTTTGACTGAGACAAAACATTATAATTAT-AATAATAAATATTTAAAAAA-GAAAGTCGAGAGAGATTCGKGTGTTGAAAATAAAATAGGTACCTTCCCCAATAAAACAATTGGAAGGGGAGTTCCGGGAGCAGTG Doronicum_corsicum_Acc_2 AGATATCCTGCCGAGTATCTCTGCACGATCTTTGTTCTAACAAAACCAACAAAATTCCATGAACACAAAATGAATTTTCTATTTGTTTTATATAAATTTCCATTTCATAGGTCCATTTCGTTTATTTGGATACCATGAATCGAAATGTTAACTTATTAAAACAAATAAAGCTTAACATTGA-ATAGAATTAATAAAATCCAGGTCGAAATGATATCGCACCTTGTAAATGCCTGATCTATGGAGCCAAACGATTTGGTCGAGGAACAAGAACGTCGACAATAATGCATTTTTTGACTGAAACAAAAC------ATTGT-GATCAGAAATATTTT---TAAAAAAGTCGAATAAAACTAATATCTGAACTAAAGATTACAAACCTTCCCCAATAAAACAATTGGGAGGGGAGTTCCTGGAGCAGTC Abrotanella_linearis AGATATCCTGCCAAGTATTTCTGCACGTTCTTTGTTCTAATAAAACCAACAAAACTCTACGAGTTCAAAATGGCATTCTAGTCGTTT----------------------------------------------------------TATACAACTTTCCAGT-TTGTAGGTCCCATCTTCGTTTGGGAACTAATAAAATCTAAATAGAAATGATAACGCACCTTGTAAATGCCTGATCTGTGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAACAATGCATTTTTTGACTGAAAGAAAACA-----TTTAT-GTTCAGAAATATTTGATAGAGAAAACACCAGTAAAACTAACATATTAACTATAGAATGCATACCTTCCCTAGTAGAACAATTGGAAGGGGAGTCCCAGGAGCAGTC Abrotanella_fertilis AGATATCCTGCCAAGTATTTCTGCACGTTCTTTGTTCTAATAAAACCAACAAAACTCTACGAGTTCAAAATGGCATTCTAGTCGTTT----------------------------------------------------------TATACAACTTTCCAGT-TTGTAGGTCCCATCTTCGTTTGGGAACTAATAAAATCTAAATAGAAATGATAACGCACCTTGTAAATGCCTGATCTGTGGAGCCAAACAATTTGGTCGAGGAACAAGAAAGTCGACAACAATGCATTTTTTGACTGAAAGAAAACA-----TTTAT-GTTCAGAAATATTTGATAGAGAAAACACCAGTAAAACTAACATATTAACTATAGAATGCATACCTTCCCTAGTAGAACAATTG??????????????????????? ; END; BEGIN TREES; Title trees_from_locus_A25; LINK Taxa = Taxa; TRANSLATE [0] 1 Doronicum_carpetanum_carpetanum_Acc_1, [1] 2 Doronicum_pardalianches_Acc_1, [2] 3 Doronicum_pardalianches_Acc_2, [3] 4 Doronicum_cataractarum_Acc_1, [4] 5 Doronicum_cataractarum_Acc_2, [5] 6 Doronicum_orientale_Acc_1, [6] 7 Doronicum_altaicum_Acc_1, [7] 8 Doronicum_altaicum_Acc_2, [8] 9 Doronicum_columnae_Acc_1, [9] 10 Doronicum_carpetanum_carpetanum_Acc_2, [10] 11 Doronicum_carpetanum_carpetanum_Acc_3, [11] 12 Doronicum_carpetanum_diazii_Acc_1, [12] 13 Doronicum_carpetanum_diazii_Acc_2, [13] 14 Doronicum_carpetanum_kuepferi_Acc_1, [14] 15 Doronicum_carpetanum_pubescens_Acc_1, [15] 16 Doronicum_carpetanum_pubescens_Acc_3, [16] 17 Doronicum_carpetanum_pubescens_Acc_5, [17] 18 Doronicum_falconeri_Acc_1, [18] 19 Doronicum_plantagineum_plantgineum_Acc_1, [19] 20 Doronicum_reticulatum_Acc_2, [20] 21 Doronicum_macrophyllum_macrophyllum_Acc_1, [21] 22 Doronicum_macrophyllum_macrophyllum_Acc_3, [22] 23 Doronicum_gansuense_Acc_1, [23] 24 Doronicum_falconeri_Acc_2, [24] 25 Doronicum_dolichotrichum_Acc_1, [25] 26 Doronicum_dolichotrichum_Acc_2, [26] 27 Doronicum_cacaliifolium_Acc_1, [27] 28 Doronicum_briquetti_Acc_1, [28] 29 Doronicum_austriacum_Acc_1, [29] 30 Doronicum_carpaticum_Acc_1, [30] 31 Doronicum_columnae_Acc_2, [31] 32 Doronicum_orientale_Acc_2, [32] 33 Doronicum_grandiflorum_Acc_1, [33] 34 Doronicum_orientale_Acc_3, [34] 35 Doronicum_hungaricum_Acc_2, [35] 36 Doronicum_glaciale_glaciale_Acc_1, [36] 37 Doronicum_stiriacum_Acc_3, [37] 38 Doronicum_glaciale_calcareum, [38] 39 Doronicum_clusii_Acc_1, [39] 40 Doronicum_grandiflorum_Acc_2, [40] 41 Doronicum_austriacum_Acc_3, [41] 42 Doronicum_corsicum_Acc_2, [42] 43 Abrotanella_linearis, [43] 44 Abrotanella_fertilis; TREE 'maximum parsimony, strict consensus' = ((43,44),(42,((7,18,41),((2,3),(6,21,22,23,24,25,32,34),((19,35),(9,30,(20,31)),(26,29,36,37,(4,5),(27,38)),(39,(1,8,11,12,13,14,28,33,40,(10,16),(15,17)))))))); TREE 'maximum likelihood' = ((43,44),(42,((41,(7,18)),(((2,3),((21,22),(23,((24,34),(32,(6,25)))))),((30,(9,(20,31))),((19,35),((37,((27,38),((29,36),(26,(4,5))))),(39,(14,((28,(15,17)),(11,((13,(8,40)),(33,(1,(12,(10,16)))))))))))))))); END;