#NEXUS

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=18;
	TAXLABELS
		Trichoderma_koningii_CBS_119500_FJ860541 Trichoderma_atroviride_CBS_142_95_EU341801 Trichoderma_hamatum_DAOM_167057_isth764 Trichoderma_pubescens_DAOM_166162_isth760 Trichoderma_evansii_CBS_123079_EU883558 Hypocrea_flaviconidia_GJS_99_49_EU883557 Trichoderma_lieckfeldtiae_CBS_123050_EU883561 Hypocrea_neorufa_GJS_96_132_HQ260621 Trichoderma_paucisporum_GJS_01_13_FJ150787 Trichoderma_theobromicola_DIS_85f_FJ007374 Trichoderma_asperellum_GJS_90_7_EU338337 Trichoderma_yunnanense_CBS_121219_GU198274 Trichoderma_asperelloides_GJS_04_116_GU248411 Trichoderma_sp._NBRC_108035 Trichoderma_sp._NBRC_108036 Trichoderma_sp._NBRC_108034 Trichoderma_sp._NBRC_108031 Hypocrea_pezizoides_GJS_01_231_isth750 
	;
END;

BEGIN CHARACTERS;
	TITLE  'Fig33-RPB2';
	DIMENSIONS  NCHAR=804;
	FORMAT DATATYPE = DNA GAP = - MISSING = ?;
	MATRIX
	Trichoderma_koningii_CBS_119500_FJ860541       TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGCTACACTTTTGCTTCTACACTATCTCATTTGCGTCGTACCAATACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTCCACAACACACATTGGGGCTTGGTGTGCCCGGCTGAGACCCCTGAGGGACAGGCTTGTGGTCTGGTCAAGAACTTGTCTCTGATGTGCTACGTCAGCGTTGGATCTCCTTCTGAGCCTCTGATCGAGTTTATGATCAACAGAGGCATGGAAGTCGTTGAGGAGTACGAGCCACTGAGATATCCTCATGCTACAAAGATCTTTGTGAACGGTGTCTGGGTTGGAATCCACCAAGACCCTAAGCATCTGGTAAACCAAGTTTTGGATACTCGTCGCAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGAAATTCGAGACCAAGAATTCAAAATCTTCTCTGATGCTGGTCGTGTTATGCGTCCCGTCTTCACTGTACAGCAGGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACTTGGTTTTGACCAAGGAACTGGTCAATAGATTGGCAAAGGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGATTGGATGGGAAGGGTTAATCAGGGCTGGTGCGGTGGAATATCTCGACGCCGAGGAAGAAGAAACGTCTATGATTTGCATGACCCCGGAAGATCTTGAGCTTTATCGTCTTCAGAAGGCCGGTATTTCCACGGAGGAAGACATGGGAGATGATCCAAACAAG
	Trichoderma_atroviride_CBS_142_95_EU341801     TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTCTCACAGGTGCTTAACCGTTACACTTTTGCTTCTACACTTTCCCATTTGCGTCGTACCAATACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTCCACAACACACACTGGGGTTTGGTGTGCCCGGCTGAGACCCCTGAAGGTCAAGCTTGTGGTCTGGTCAAGAATTTGTCTCTCATGTGCTACGTCAGTGTTGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAACAGAGGTATGGAAGTCGTTGAGGAGTATGAGCCACTGAGGTATCCCCATGCTACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGATACTCGTCGCAAATCCTATCTGCAGTACGAGGTCTCTCTGATCAGAGAAATTCGAGACCAAGAATTCAAAATCTTCTCTGACGCCGGCCGTGTCATGCGTCCCGTCTTCACTGTACAGCAGGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACCTGGTTTTGACCAAGGACCTTGTCAATAGACTGGCCAAAGAGCAGGCTGAGCCTCCAGAAGACCCAAGCATGAAGCTCGGATGGGAAGGGCTGATTAGAGCTGGTGCGGTGGAATATCTCGACGCCGAGGAAGAAGAAACGTCCATGATTTGCATGACACCGGAGGATCTGGAGCTCTATCGTCTTCAAAAGGCCGGCATTGCCACGGATGAAGACATAGGAGACGATCCAAATAAG
	Trichoderma_hamatum_DAOM_167057_isth764        TGGGGTGACCAGAAGAAGGCAATGAGCTCGACTGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCCTCGACACTTTCTCATTTGCGTCGTACCAACACACCCATTGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACATTGGGGTTTGGTGTGCCCAGCCGAGACCCCCGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATAGGGGTATGGAGGTTGTTGAGGAGTACGAACCACTGAGGTATCCCCATGCTACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGACACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGATATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACTTGGTATTGACCAAGGACCTCGTCAACAGACTTGCCAAAGAGCAGGCTGAGCCTCCAGAAGACCCAAGCATGAAGCTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGACGCCGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTTGAACTTTATCGTCTTCAGAAGGCTGGTATTTCCACGGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_pubescens_DAOM_166162_isth760      TGGGGTGACCAGAAGAAGGCTATGAGCTCGACTGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACGCTTTCTCATTTGCGTCGTACAAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACTCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAATTTGTCTCTGATGTGCTACGTTAGTGTCGGATCTCCTTCTGAGCCCTTGATCGAGTTTATGATCAACAGAGGTATGGAAGTCGTTGAGGAGTACGAACCACTGAGGTATCCCCATGCCACAAAGATCTTTGTGAATGGTGTCTGGGTTGGTATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGACACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGACATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACTTGGTTTTGACCAAGGATCTCGTCAACAGACTGGCTAAAGAGCAGGCTGAGCCTCCAGAAGACCCAAGCATGAAGCTTGGATGGGAGGGGCTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGTCTATGATTTGCATGACACCGGAGGATCTTGAACTTTACCGTCTTCAAAAAGCTGGTATTTCCACGGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_evansii_CBS_123079_EU883558        TGGGGTGACCAGAAGAAGGCTATGAGCTCGACTGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACAAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACCCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATCGAGGTATGGAGGTCGTTGAAGAGTATGAACCGCTGAGATATCCCCATGCGACAAAGATCTTTGTGAATGGAGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGATACTCGTCGTAAATCCTATCTGCAATACGAAGTCTCTCTGATCAGAGACATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGATCCGGAAACGGGTATCAACAAGGGCCACTTGGTCTTGACCAAGGACCTTGTCAACAGACTGGCTAAAGAGCAGGCTGAGCCTCCAGAAGACCCAAGCATGAAGCTTGGTTGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGGCCATGATTTGCATGACACCGGAGGATCTTGAACTTTATCGTCTTCAGAAAGCTGGTATCTCCACGGATGAAGACATGGGAGACGATCCAAACAAG
	Hypocrea_flaviconidia_GJS_99_49_EU883557       TGGGGTGACCAGAAGAAGGCCATGAGCTCGACTGCAGGCGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCTCATCTGCGTCGTACAAACACACCCATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTACACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACCCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCCTTGATCGAGTTTATGATCAACAGAGGTATGGAGGTCGTTGAGGAGTATGAACCGCTGAGAAATCCCCATGCGACAAAGATCTTTGTGAATGGAGTTTGGGTTGGAATCCACCAAGACCCCAAGCATCTTGTGAACCAAGTTTTGGATACTCGTCGCAAATCCTATCTGCAATACGAAGTCTCTCTGATCAGAGACATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGCCGTGTTATGCGTCCCGTCTTTACTGTACAACAAGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACTTGGTTTTGACCAAGGACCTTGTCAACAGACTGGCTAAAGAGCAGGCTGAGCCTCCAGAAGACCCAAGCATGAAGCTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGGCCATGATTTGCATGACACCGGAGGATCTTGAATTTTATCGTCTTCAGAAAGCTGGCATATCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_lieckfeldtiae_CBS_123050_EU883561  TGGGGTGACCAGAAGAAGGCTATGAGCTCGACCGCAGGTGTATCTCAGGTGCTTAACCGTTACACTTTTGCTTCGACACTATCTCATTTGCGTCGTACCAATACACCCATTGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGCTTAGTGTGCCCGGCCGAGACCCCTGAAGGACAGGCTTGTGGTCTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCCTCCGAGCCTTTGATTGAGTTTATGATCAACAGAGGCATGGAGGTCGTTGAGGAGTACGAACCGCTGAGGTATCCCCACGCGACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGATACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCCCTGATCAGAGACATTCGTGATCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCGGAAACAGGCATCAACAAGGGCCACCTGGTTTTGACCAAGGATCTTGTCAATAGATTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGATCCAAGCATGAAGCTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTTGAGCTTTACCGTCTCCAGAAGGCTGGCATTTCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Hypocrea_neorufa_GJS_96_132_HQ260621           TGGGGTGATCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCGCAGGTGCTTAACCGTTACACTTTTGCTTCAACACTATCCCATTTGCGTCGTACCAATACCCCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTATGCCCGGCCGAGACACCTGAAGGACAGGCTTGTGGCCTGGTCAAAAACTTGTCCCTGATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAACAGAGGCATGGAGGTCGTTGAAGAGTACGAACCACTGAGGTATCCCCATGCTACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCATCAAGATCCCAAGCATTTGGTAAACCAAGTTTTGGACACTCGTCGTAAATCTTATCTGCAGTACGAAGTCTCTCTGATCAGAGACATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTAATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCGGAAACGGGTATCAACAAGGGCCACTTGGTTTTGACCAAGGATCTCGTCAATAGATTGGCCAAGGAGCAGGCTGAGCCCCCAGAAGACCCAAGCATGAAGCTTGGATGGGAAGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGTCTATGATCTGCATGACGCCGGAGGATCTTGAACTCTATCGTCTTCAGAAAGCTGGCATTGCCACAGATGAAGACATAGGAGACGATCCAAACAAG
	Trichoderma_paucisporum_GJS_01_13_FJ150787     TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCAACACTTTCTCATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAATACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCCTTGATCGAGTTCATGATCAACAGAGGTATGGAGGTCGTTGAAGAGTACGAACCGCTGAGATATCCCCATGCGACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCATCAAGACCCCAAACATCTGGTGAACCAAGTTTTGGACACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGGGATATTCGTGACCAAGAGTTCAAGATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACCGTACAGCAAGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGACCTTGAGCTTTATCGTCTTCAGAAAGCTGGTATTTCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_theobromicola_DIS_85f_FJ007374     TGGGGTGACCAGAAAAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCACATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAATACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCTCTAATGTGCTACGTCAGTGTCGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAACAGAGGTATGGAGGTCGTTGAAGAGTACGAACCACTGAGATATCCCCATGCGACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTGAACCAAGTCCTGGATACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGATATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACCGTACAGCAAGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTTGATGCCGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTTGAGCTTTATCGTCTTCAGAAGGCTGGTATTTCCACGGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_asperellum_GJS_90_7_EU338337       TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAATACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTATGCCCGGCCGAGACCCCTGAGGGACAGGCTTGTGGTTTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCCGAGCCTTTGATCGAGTTTATGATCAACAGAGGTATGGAGGTCGTTGAGGAATACGAACCGCTGAGGTATCCCCATGCGACAAAGATTTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGACACTCGTCGTAAATCCTATCTGCAATACGAAGTCTCTCTGATCAGAGATATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAGGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTTTTAACCAAGGATCTTGTCAATAGACTGGCCAAAGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGATGGGAAGGGTTAATTCGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTCGAGCTTTACCGTCTTCAGAAGGCTGGCATTGCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_yunnanense_CBS_121219_GU198274     TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAATACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTATGCCCGGCCGAGACCCCTGAGGGACAGGCTTGTGGTTTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCCGAGCCTTTGATCGAATTTATGATCAACAGAGGTATGGAGGTCGTTGAGGAGTACGAACCGCTGAGGTATCCCCATGCGACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCATCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGACACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGATATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAGGATGACCCAGAAACGGGCATCAACAAGGGCCACCTGGTTTTAACCAAGGATCTTGTCAATAGACTGGCCAAAGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGATGGGAAGGGTTAATTCGAGCTGGTGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTTGAGCTTTACCGTCTTCAGAAGGCTGGCATTGCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_asperelloides_GJS_04_116_GU248411  TGGGGTGACCAGAAGAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGTTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAATACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGTTTGGTATGCCCGGCCGAGACCCCTGAAGGACAGGCTTGTGGTTTGGTCAAAAACTTGTCTCTGATGTGCTACGTCAGTGTCGGATCTCCTTCCGAGCCTTTGATCGAGTTTATGATCAACAGAGGTATGGAGGTCGTTGAGGAATACGAACCGCTGAGGTATCCCCATGCGACAAAGATCTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTAAACCAAGTTTTGGACACTCGTCGCAAATCCTATCTGCAATACGAAGTCTCTCTGATCAGAGATATTCGTGACCAAGAATTCAAAATCTTCTCTGACGCCGGTCGTGTTATGCGTCCTGTCTTTACTGTACAGCAAGAGGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTTTTAACCAAGGATCTTGTCAACAGACTGGCTAAAGAGCAGGCTGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGATGGGAAGGGTTAATTCGGGCTGGCGCGGTGGAATATCTCGATGCCGAGGAAGAAGAAACGGCTATGATTTGCATGACACCGGAGGATCTTGAGCTCTACCGTCTTCAGAAGGCTGGCATTTCCACAGATGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_sp._NBRC_108035                    TGGGGTGACCAGAAAAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGCTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAACTCCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAGAACTTGTCTCTGATGTGCTACGTTAGTGTGGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATAGAGGTATGGAGGTCGTTGAAGAGTACGAACCGCTGAGGTATCCCCATGCGACAAAGATTTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTGAACCAAGTTTTGGACACCCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGAGATTCGTGACCAAGAATTCAAAATCTTTTCTGACGCCGGTCGCGTGATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCAGAAACGGGCATTAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGACCCAAGCATGAAATTTGGATGGGAGGGGTTAATCAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGTCCATGATTTGCATGACACCGGAGGATCTTGAATTTTATCGTCTTCAGAAGGCTGGTATTTCTACCGAGGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_sp._NBRC_108036                    TGGGGTGACCAGAAAAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGCTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAACTCCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAGAACTTGTCTCTGATGTGCTACGTTAGTGTGGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATAGAGGTATGGAGGTCGTTGAAGAGTACGAACCGCTGAGGTATCCCCATGCGACAAAGATTTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTGAACCAAGTTTTGGACACCCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGAGATTCGTGACCAAGAATTCAAAATCTTTTCTGACGCCGGTCGCGTGATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCAGAAACGGGCATTAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGACCCAAGCATGAAATTTGGATGGGAGGGGTTAATCAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGTCCATGATTTGCATGACACCGGAGGATCTTGAATTTTATCGTCTTCAGAAGGCTGGTATTTCTACCGAGGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_sp._NBRC_108034                    TGGGGTGACCAGAAAAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGCTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAACTCCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAGAACTTGTCTCTGATGTGCTACGTTAGTGTGGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATAGAGGTATGGAGGTCGTTGAAGAGTACGAACCGCTGAGGTATCCCCATGCGACAAAGATTTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTGAACCAAGTTTTGGACACCCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGAGATTCGTGACCAAGAATTCAAAATCTTTTCTGACGCCGGTCGCGTGATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCAGAAACGGGCATTAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGACCCAAGCATGAAATTTGGATGGGAGGGGTTAATCAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGTCCATGATTTGCATGACACCGGAGGATCTTGAATTTTATCGTCTTCAGAAGGCTGGTATTTCTACCGAGGAAGACATGGGAGACGATCCAAACAAG
	Trichoderma_sp._NBRC_108031                    TGGGGTGACCAGAAAAAGGCAATGAGCTCGACCGCAGGTGTATCACAGGTGCTTAACCGCTACACTTTTGCTTCGACACTTTCTCATTTGCGTCGTACCAACACACCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAACTCCACAACACACACTGGGGTTTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAGAACTTGTCTCTGATGTGCTACGTTAGTGTGGGATCTCCTTCTGAGCCTTTGATCGAGTTTATGATCAATAGAGGTATGGAGGTCGTTGAAGAGTACGAACCGCTGAGGTATCCCCATGCGACAAAGATTTTTGTGAATGGTGTCTGGGTTGGAATCCACCAAGACCCCAAGCATCTGGTGAACCAAGTTTTGGACACCCGTCGTAAATCCTATCTGCAGTACGAAGTCTCTCTGATCAGAGAGATTCGTGACCAAGAATTCAAAATCTTTTCTGACGCCGGTCGCGTGATGCGTCCTGTCTTTACTGTACAGCAAGAAGATGACCCAGAAACGGGCATTAACAAGGGCCACCTGGTTTTGACCAAGGATCTCGTCAATAGACTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGACCCAAGCATGAAATTTGGATGGGAGGGGTTAATTAGGGCTGGTGCGGTGGAATATCTCGATGCTGAGGAAGAAGAAACGTCCATGATTTGCATGACACCGGAGGATCTTGAATTTTATCGTCTTCAGAAGGCTGGTATTTCTACCGAGGAAGACATGGGAGACGATCCAAACAAG
	Hypocrea_pezizoides_GJS_01_231_isth750         TGGGGCGATCAGAAAAAGGCAATGAGCTCGACTGCAGGTGTATCGCAGGTGCTCAATCGTTACACTTTTGCTTCGACACTTTCTCATTTGCGCCGCACCAACACGCCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACACACTGGGGATTGGTGTGCCCGGCCGAGACGCCTGAAGGACAAGCTTGTGGTCTGGTCAAAAACTTGTCGCTGATGTGCTACGTCAGTGTCGGGTCTCCTTCCGAGCCGTTGATCGAATTTATGATCAACAGAGGTATGGAAGTTGTCGAGGAATACGAACCGCTGAGGTATCCCCATGCGACAAAGATCTTTGTGAATGGAGTCTGGGTTGGCATCCACCAGGACCCCAAGCATCTGGTGAACCAGGTTCTGGATACTCGTCGTAAATCCTATCTGCAGTACGAAGTCTCGTTGATCAGAGAAATCCGTGATCAAGAATTCAAAATTTTCTCTGACGCCGGTCGCGTCATGCGTCCTGTCTTTACCGTACAGCAGGAAGATGACCCGGATTTGGGCACCAGCAAAGGTCACCTGGTTTTAACCAAGGAGCTCGTCAATAGACTGGCCAAAGAGCAGGCCGAGCCTCCGGAAGACCCAAGCATGAAGCTTGGGTGGGAGGGGTTGATCAGGGCCGGTGCGGTAGAATATCTGGATGCCGAAGAAGAGGAAACGTCCATGATTTGCATGACACCGGAGGATCTTGAGTTTTATCGTCTTCAGAAAGCTGGTATTTCCCAAGATGAAGACATGGGAGACGATCCAAACAAG
;
END;

BEGIN TREES;
	Title Fig33_RPB2t;
	LINK Taxa = Taxa;
	TRANSLATE
		1 Trichoderma_koningii_CBS_119500_FJ860541,
		2 Trichoderma_atroviride_CBS_142_95_EU341801,
		3 Trichoderma_hamatum_DAOM_167057_isth764,
		4 Trichoderma_pubescens_DAOM_166162_isth760,
		5 Trichoderma_evansii_CBS_123079_EU883558,
		6 Hypocrea_flaviconidia_GJS_99_49_EU883557,
		7 Trichoderma_lieckfeldtiae_CBS_123050_EU883561,
		8 Hypocrea_neorufa_GJS_96_132_HQ260621,
		9 Trichoderma_paucisporum_GJS_01_13_FJ150787,
		10 Trichoderma_theobromicola_DIS_85f_FJ007374,
		11 Trichoderma_asperellum_GJS_90_7_EU338337,
		12 Trichoderma_yunnanense_CBS_121219_GU198274,
		13 Trichoderma_asperelloides_GJS_04_116_GU248411,
		14 Trichoderma_sp._NBRC_108035,
		15 Trichoderma_sp._NBRC_108036,
		16 Trichoderma_sp._NBRC_108034,
		17 Trichoderma_sp._NBRC_108031,
		18 Hypocrea_pezizoides_GJS_01_231_isth750;
	TREE PAUP_1 = ((1:0.040835,2:0.032994):0.0125175,(8:0.042836,((7:0.028084,(13:0.007293,(11:0.004651,12:0.006856):0.002523):0.009584):0.004312,((3:0.017892,(4:0.017567,(5:0.008655,6:0.024496):0.011551):0.006479):0.009155,((9:0.016007,10:0.010542):0.003559,(18:0.089539,(17:0.0,(16:0.0,(14:0.0,15:0.0):0.0):0.001254):0.032616):0.005416):0.005334):0.00551):0.007096):0.0125175)[% ] [% ] [%  setBetweenBits = selected ];
END;