NEXUS
[File created by TreeBASE:  7/26/07  21:00:19]
[Matrix accession#: M990]

BEGIN TAXA;
	TITLE M990;
	DIMENSIONS  NTAX=29;
	TAXLABELS
		Hymenogaster_populetorum	Hymenogaster_parksii	Hymenogaster_olivaceus	Hymenogaster_griseus	Hymenogaster_glacialis	Hymenogaster_gardneri	Hymenogaster_bulliardii	Hymenogaster_alnicola	Hebeloma_velutipes	Hebeloma_radicosum	Hebeloma_mesophaeum	Hebeloma_helodes	Hebeloma_fastibile	Hebeloma_crustuliniforme	Hebeloma_circinans	Gymnopilus_spectabilis	Gymnopilus_sapineus	Gymnopilus_penetrans	Cortinarius_violaceus	Cortinarius_odorifer	Cortinarius_collinitus	Cortinarius_anomalus	Hymenogaster_sp._nov._Trappe20345	Hymenogaster_subalpinus	Hymenogaster_tener	Naucoria_bohemica_AF124712	Naucoria_bohemica_IB19940290	Naucoria_escharoides	Naucoria_scolecina
	;
END;

BEGIN CHARACTERS;
	TITLE M990;
	DIMENSIONS NCHAR=859;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Hymenogaster_populetorum                ?????????????????????????????ACCTGCGGAAGGATCATTATTG--AATGAACTTGGCGTGGTTGTTGCTGGCCCTCTC--GGG-GGCA---TGTGCACA-CCC-GCCATCTCC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGAAT-AGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAA--TG-CTG-----TCACTTTGCGTC-AGCTTTCTTTGCA-CTT--CC--AAGCCTACGTT----TTTCA-TATA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCAT--TTGGGCCTC-AG-TG-CC-TATAAAA--CCATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGG----TTCTCTTTTGCTGGCTTCT-------------AGG-TCGGCTCCCCTGAAATC-CATTAGCTGG---TGCCCCGCGTGGA--CT---GTCTATTTGGTGTGATAAT--TATCAACGCCG--TGGATGT-----CTGCA--AT---T----GGTTTTGGCACTG-CTT-CT-AA-CCGTCT-GTTC-ATTTGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_parksii                    ??????????????????????????????CCTGCGGAAGGATCATTATTG--AAGGAACTTGGTGTGGTTGTTGCTGGCCCTACC---GG-GGCA---TGTGCACA-CCT-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-AGA----CTTTCCGA---GG-C------AACTCGG-------TTGG------GAGGAA--TG-CTG------CA-------TC-AGCTTTCTTTGCG-CTT--CC--AGGCCTATGTT----TTTCA-TAAA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCTTC-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC-----TTTGC-TG-AT-AATGGCTTGGA-CG--TGGGGG----TTTTCTTTTGCCGGCTTCTT------CACTGAAGG-TCAGCTCCCCTTAAATT-CATTAGCTGG---TGCCCCGCCTGGA--CT---ATCTATTTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTTCA--AA--------GGGTTT-GCATTG-CTT-CT-AA-TAGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAA?????
		Hymenogaster_olivaceus                  ???????????????????????????????????????GGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCTCTCTTGTGGG-GGCA---TGTGCACA-CCC-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-GAA----TTTTCCGA---GG-T------AACTCGG-------TCGG------GAGGAA--TG-CTGCGC--TCTTT--GCGTC-GGCTTTCTTTGCA-CTT--CC--AAGCCTACGTT-TTTTTTCA-TATA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCTA-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGGGGG--GTTCTTTTGCTGGCTTTC---------------G-TCAGCTCCCCTAAAATG-CATTAGCTGG---TGCCCCGCGTGGA--CT---GTCCGTTCGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCA--AA---TA---GGGTTT-GCACTG-CTT-CT-AA-TCGTCT-GTTC-ATTTGGACAAT--A----TA-TG-ACAATTTGACCTCAAATCAGGTAGGACTAGCCGCTGAACTTAA
		Hymenogaster_griseus                    ????????????????????????????????????GAAGGATCATTATTG--AATGAACTTGGCGTGGTTGTTGCTGGCCCTCTC-GGGG-GGCA---TGTGCACA-CTC-GCCATCTCC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGAAT-AGA----CTTTCCGA---GG-C------AACTCGG-------TTGG------GAGGAA--TG-CTG-----TCGCTTTGCGTC-AGCTTTCTTTGGA-CTT--CC--AAGCCTACGTT----TTTCA-TATA--CCC--ATAG-TAT-GT-AACAGAATGT---GTCAT--TTGGGCCTC-AG-TG-CC-TATAAA---CCATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGGG--CTTATCTTTTGCTGGCTTCTTT-----CACA-GAGG-TCAGCTCCCCTGAAATG-CATTAGCTGG---TGCCCCGCGTGGA--CT---GTCTATTTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCA--AT---T----GGTTTTGGCACTG-CTT-CT-AA-CTGTCT-GTTC-ATTTGGACAAT--A----CA-TG-GCAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_glacialis                  ????????????????????????????????????????GATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCC-CTT---GG-GGCA---TGTGCACATCCC-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-------------------------------------------------------------------------------------------------------------------GGTCTACGTT---TTTTCA-TATA--CCCC-ATAG-CAT-GT-AACAGAATGT---ATCATA-TTAGGCGCT-TG-TG-CCTTATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC--------------------------T-TATCGGTTGGA-TG--TGGGGG----------TTTGCTGGCT---------------CAGG-TCAGCTCCCCTTAAATG-CATTAGCTGG---TGCCCCGTGTGGA--CT---GTCTA-TTGGCGTGATAAT--TATCTACGCCG--TGGATG--------------------------------------------AG-CACTGC-TTCC-AACACCACAATT-A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_gardneri                   ??????????????????????????????????????????????????G--AAGGAACTTGGTGTGGTTGTTGCTGGCCCTATT---GG-GGCA---TGTGCACA-CCT-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-AGA----CTTTCCGA---GG-C------AACTCGG-------TTGG------GAGGAA--TG-CTG------CA-------TC-AGCTTTCTTTGCG-CTT--CC--AGGCCTATGTT----TTTCA-TAAA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCTTC-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC-----TTTGC-TG-AT-AATGGCTTGGA-CG--TGGGGG----TTTTCTTTTGCCGGTTTTTT------CACTGAAGG-TCAGCTCCCCTTAAATT-CATTAGCTGG---TGCCCCGCCTGGA--CT---ATCTATTTGGTGTAATAAT--TATTTACCCCG--TGAATGT-----CTTCC--AA-A------GGGTTT-GCATTG-CTT-CT-AA-AAGTCN-NNNN-NTTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAG???????????????????
		Hymenogaster_bulliardii                 ?????????????????????????????????????AAGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCT-TCTTGTGGG-GGCA---TGTGCACA-CCC-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-GAA----TTTTCCGA---GG-T------AACTCGG-------TCGG------GAGGAG-ATG-CTGCGC--TCTTT--GCGTC-GGCTTTCTTTGCA-CTT--CC--AAGCCTACGTT--TTTTTCA-TATA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCTA-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGGGG--TTTTCTTTTGCTGGCTTTC---------------G-TCAGCTCCCCTAAAATG-CATTAGCTGG---TGCCCCGCGTGGA--CT---GTCCGTTCGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCA--AA---TA---GGGTTT-GCACTG-CTT-CT-AA-TCGTCT-GTTC-ATTTGGACAAT--A----TA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_alnicola                   ????????????????????????????????????????????????????????????????TGTAGTTGTTGCTGGCCCTTTT--GGG-GGCA---TGTGCACA-CCC-ACCATCCTC--ATCT---CTCCAAC--TGCCCACCTCTTGTAGA-CTTGGGGAT-AGA----CTTTCCGA---GG-C------AACTCGG-------TCTG------GAGGAA--TG-CTT------CT--------CAAGCTTTCTTTGTA-TTT--CC--CGGTCTACGTT-TTTTTTTA-TATA--CCCC--ATG-CAT-GT-AACAGAATGT---ATCAT--TTGGGCCCT-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATCA--GT---TTATTTC-TG-AT-AGTGGCTTGGA-TG--TGGGGG-----TTTCTCTTGCTGGCT---------------CAGG-TCAGCTCCCCTTAAATG-CATTAGCTGG---TGCCCCGTGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCA--TGCATGGATGGTCTGC-----------------TTAGCACTG-CTT-TT-AA-CCGTCT---------CAGACAAT--A----CA-TG-ACAATTTGACCTCAAATAAGGTAGGAC????????????????
		Hebeloma_velutipes                      ????????????????????????????????????????????????TTG--AATGAACTTGGTGTGGTTGTTGCTGGCTCTTTC--GAG-GGCA---TGTGCACG-CCC-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAT--TG-CCG-----GCGCC----AGCTGGCTTTCTTTGCA-TTT--CC--AGGTCTACGTT----TTTCAATATA--CCCC-ATTG-TAT-GT-AACAGAATGT---AACA---TTGGGCACT-TG-TG-CC-TATAAA---CTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATCA--AC----TTTTGT-TG-AT-AATGGCTTGGA-TA--TGGGGG-----TTTATTTTGCTGGCTTCTTT------ACAGATGG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTGCAATCA---TA-T--GGTTT-GCACTG-CTT-CC-AA-CTGTCT-GTTG-AATCAGACAAT--A----CA-TG-ACAAT??????????????????????????????????????
		Hebeloma_radicosum                      ????????????????????????????????????????????????TTG--AATGAACTTGGTGTGGTTGTTGCTGGCCYTCTC--GGG-GGCA---TGTGCACA-CCC-ATCATTCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAT--TG-CTG-----GCACT----CGCTAGCTCTCCTTGCA-TTT--CC--AGGTCTATGTT----TTTCA-TATA--CCCC-ATTG-TAT-GT-AACAGAATGT---ATCA---TTGGGCC-T-TG-TG-CC-TATAAAA--CC-TATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATCA--GC----TTTTGT-TG-AT-ACTGGCTTGGA-TA--TGGGGG-----TCTATTTTGCTGGCTTCTTT------ACAGATGG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTGCAATCA---TA-T-GGGTTT-GCACTG-CTT-CC-AA-CCGTCT-GTTC-ATTCGGACAAT--A----CT-TG-ACAAT??????????????????????????????????????
		Hebeloma_mesophaeum                     ?????????????????????????????????????????????????????????????????????TTGTTGCTGGCCCTTTC--GGG-GGCA---TGTGCACA-CCC-ATCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAC-TTG-CTG-----GCACT----AGCTGGCTTTCCTTGCA-TTT--CC--AAGTCTATGTT---TTTTCA-TATA--CCCC-ATTG-AAT-GT-AACAGAATGT---AACATA-TTGGGCCTT-TG-TG-CC-TATAAAAA--CTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACTATTATCA--GC----TTTTGC-TG-AT-GATGGCTTGGA-TA--TGGGGG-----TTTATTTTGCTGGCTT---------CACAGAATG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTACAATCA---TA-T-GGGTTT-GCGCTG-CTT-CC-AA-CCGTCT-GTTT-ACTCAGACAAT--A----CA-TG-ACAA???????????????????????????????????????
		Hebeloma_helodes                        ????????????????????????????????????????????????????????????????????GTTGTCGCTGGCCCTCTT--GGG-GGTA---TGTGCACA-CCT-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-TTT-GGAAT-TGA----TTATCCGA---GG-C------AACTCGG-------TCGT------GAGGAC--TG-CTA-----GCACTT---AGCTGGCTTTCTTTGCA-ATT--CC--AAGTCTATGTT----TTTCA-TATA--CCCC-ATTG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCCT-TG-TG-CC-TATMAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCATTATCA--AC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGG-----TCTATTTTGCTGGCTTCT---------CAGATAG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCTA--TAGACAT-----CTGCAATCA---TA-T-GGGTTT-GCGCTG-CTT-CT-AA-CAGTCT-GTTG-ATTCAGACAAT--A----CA-TG-ACAAT??????????????????????????????????????
		Hebeloma_fastibile                      ???????????????????????????????????????????CATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTTTC--GGG-GGCA---TGTGCACA-CCC-ATCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAC-TTG-CTG-----GCATT----AGCTGGCTTTCCTTGCA-TTT--CC--CAGTCTATGTT---TTTTCA-TATA--CCCC-ATTG-AAT-GT-AACAGAATGT---AACATA-TTGGGCCTT-TG-TG-CC-TATAAAAA--CTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACTATTATCA--GC----TTTTGC-TG-AT-GATGGCTTGGA-TA--TGGGGG-----TTTATTTTGCTGGCTT---------CACAGAATG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TNCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTACAATCA---TA-T-GGGTTT-GCACTG-CTT-CC-AG-CCGTCT-GTTT-ACTCAGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hebeloma_crustuliniforme                ????????????????????????????????????????????????TTG--AATGAACTTGGTGTGGTTGTCGCTGGCCCTCTT--GGG-GGTA---TGTGCACA-CCT-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-TTT-GGAAT-TGA----TTATCCGT---GG-C------AACTCGG-------TCGT------GAGGAC--TG-CTA-----GCACTT---AGCTGGCTTTCTTTGCA-ATT--CC--AGGTCTATGTT----TTTCA-TATA--CCCC-ATTG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCCT-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCARAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCATTATCA--AC----TTTTGC-TG-AT-ATTGGCTTGGA-TG--TGGGGG-----TTTATTTTGCTGGCTTCT---------CATATAG-TCAGCTCCCCTTAAAAG-CATTAGCCGG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCTA--TAGACAT-----CTGCAATCA---TA-T-GGGTTT-GCGCTG-CTT-CT-AA-CAGTCT-GTTG-ATTCAGACAAT--A----CA-TG-ACAAT??????????????????????????????????????
		Hebeloma_circinans                      ????????????????????????????????????????????????TTG--AATGAACTTGGTGTGGTTGTCGCTGGCCCTCTC--GGG-GGCA---TGTGCACA-CCC-GCCATCCTC--ATCT---CTCCACC--TGTGCACTTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAC--TG-CTT--------------A-TTGGCTTTCCTTGCA-TTT--CC--AGGCCTACGTT----TTTCA-TATA--CCCC-ATTG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCCT-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATTA--GC----TTTTGC-TG-AT-AATGGCTTGGA-TA--TGGGGG-----TATATTTTGCCGGCTTCTT------CACAGATGG-TCAGCTCCCCTTAAATG-CATTAGCCAG---TGCCCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTGCAATTA---TA-T-GGGTTT-GCACTG-CTTCCT-AA-CCGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACCAT??????????????????????????????????????
		Gymnopilus_spectabilis                  ???????????????????????????????CTGCGGAAGGATCATTATTG--AATAAACTTGATGTGGTTGTAGCTGACTTTCGCAAGAG-AGTA---TGTGCTCG-CCC-GTCACCTTT--ATCT---TTCCACC--TGTGCACTTTTTGTAGA-TTT-GAATTGTAG------------------CTTTC--CGAGGTAA-----CTCGGTTGG--GAGGAA--TGTC---------ATT---CG-TG-GCTTTTCATGTAATACGTT--CAAGTCTATGTT-----TTCA-TATA--CTCC-AAA--AAT-GT-AACAGAATGT---ATCA---TTGGGCCT--TG-TG-CC-TATAAA---CTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCC-TTGGTATTCCGAGGGGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAGCC-TTATTA--GC----TTTTGC-T--TCTAATGGTCTGGA-TG--TGGGGG-------TC-TTTGCTGGTTT---------CGCAAGAAA-TCTGCTCCCCTTAAATG-TATTAGCCGG---TGCCCTACGTGGA--CT---GTCTA-CTGGTGTGATAAT--TATCTACGCCG-TTAGATGT-----CTGC---TTT--AAAT-GGGAT--GCGCTG-CTT-CT-AATCG-TCCTTTCA-----GGACAATT-ATT-----GCACCATTTTGACCTCA?????????????????????????????
		Gymnopilus_sapineus                     AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTG--AATAAACTTGATGTGGTTGTAGCTGGCTCTCTT--GGG-GGTA---TGTGCTCG-CCC-GTCATCTTT--ATAT---TTCCACC--TGTGCACTTTTTGTAGA-TTT-AGA-TGTGA------------------CTTTC--TGTGGCGA-----CTCAGTTGG--GAGGAA--TGTC--------AATT---CGTTG-GCTTTCCTTGTA-TGT-CC---AAATCTATGTT----TTTTA-TATA--CTCC---AG-AAT-GT-AATAGAATGT---ATCA---ATAGGCCT--TG-TG-CC-TATAAA-----TAGTACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCC-TTGGTATTCCGAGGGGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTACTA--GCTTTTATGAGC-AA-TGTAATGGCTTGGA-TG--TGGGGG-------TTTTTTGCTGGCGG---------CGAAAGAAA-TCAGCTCCCCTAAAATC-TATTAGCTGG--TGCCCCCGTGTGGA--CT---ATCTA-CTGGTGTGATAAT--TATCTATGCCG-TTAGATGT-----C-----------AAATAGGGAT--GTGCTG-CTT-CT-AATTG-TCCACTTA-----GGACACTT-ATT-----GA-CTATT-TGACCTCAA????????????????????????????
		Gymnopilus_penetrans                    ???????????????????????????????????GGAAGGATCATTATTG--AATAAACCTGATGTGGTTGTAGCTGGCTCTCTT--GAG-AGTA---AGTGCTCG-CCC-GTCATCTTT--GTCT---TTCCACC--TGTGCACTTCTTGTAGA-TTT-GGA-TGTAA------------------CTGTC--CGAGGCAA-----CTC-GGTTGG-GAGGAA--TGTC---------ATT---CG-TG-GCTTTCCTTGTA-TGT-CC---AAGTCTATGTT-----TTCA-TATA--CTCC-AAAG-AAT-GT-AACAGAATGT---ATCA---CTAGGCCT--TG-TG-CC-TATAAA---CTAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCC-TTGGTATTCCGAGGGGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTACTA--GC----TTTTGC-TA-TGTAATGGCTTGGA-TA--TGGGGG-------TCTTTTGCTGGTTT---------CGAAAGGAA-TCTGCTCCCCTTAAATG-CATTAGCCGG---TGCCCCGCGTGGA--CC---GTCTA-TTGGTGTGATAAT--TATCTACGCCG-TTAGACGT-----CTGC---TTT--AAAT-GGGTT--GTGCTG-CTT-CT-AATCG-TCCTCTTA-----GGACAATT-ATT-----GA-CCATT-TGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Cortinarius_violaceus                   ????????????????????????????AACCTGCGGAAGGATCATTATTG-AAATAAACCTGATA-AGTTGCTGCTGGCTCTCT--AGGG-AGCA---TGTGCACA-CTTTGTCATCTTT--ATAT---CTTCACA--TGTGCACCTCTTGTAGA-CTTTGGA-T-ATC-----TTTCTGAA--TG---------TA---A-----TTCAGGTTTT--GAGG-A-TTGACTT------TTT----GGTCTC----TCCTTACA-TTT--CC--AAATCTATGTT---CCTTCA-TATA--C----ACT--TAT-GT-TATAGAATGT--AATAAA--ATAGGCCTTTTT-TG-CCTTACAAAAA--CCTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCC-TTGGTATTCCGAGGAGTATG-CCTGTTTGAGTGTCATTAATATAT-------CAACC-TCTTCAA-GC----TTTTGCTTG-TC-GAGTGTTTGGA-TT--TGGGG----------TTGTGCTGGTCTTATTTTCT------GAAGGTCAGCTCCCCTGAAATG-TATTAGCAGA----ACAATTTGTTGA--CC---GTTCA-TTAATGTGATAAC--TATCTACA----TTATTGAT-----GTGTG--AG----GCAGTAGTT---CA--G-CTT-CTTAA-CAGTCC-ATTG-ACTTGGACAA---ATTTTCA----TTAATGTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Cortinarius_odorifer                    ????????????????????????????AACCTGCGGAAGGATCATTATTG-AAATAAACCTGATA-AGTTGTTGCTGGCTCTCT--AGGG-AGCA---TGTGCACA-CTT-GTCATCTTT--GTAC---CTTCACC--TGTGCACCTTTTGTAGA-CTT-GAG-T-ATC----TCT-CTGAA--TG-CT----TTTGTA-------TTCAGGATT---GAGG-A-TTGACTT------TC-----TGTCTT----TTCTTATA-TTTT-C---AAGTCTATGTT---TCTTCA-TATA--CCCT-AATG-TAT-GT-TCAAGAATGT--AATTA---ATGGGCCTTTTG-TG-CC-TATAAAG---TCTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAATATATAT-----CAACC-TTT---------------------------GG-TTGGA-TG--TGGG------------TTTGCTGGCCTCTT------------AAGGTCAGCTCCCCTTAAATG-CATTAGCGGACA--ATATATTGCCAA--CT---GTTCA-TTGGTGTGATAAT-TTATCTACA----CTATTAA------C-CTG--AC----GCAAT-GTT---CA--G-CTT-CT-AA-CGGTCC-ATTG-ACTTGGACAA---ATTTATTTTA-TTAATGTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Cortinarius_collinitus                  ??????????????????????????????CCTGCGGAAGGATCATTATTG-AAATAAACCTGATG-AGTTGTTGCTGGTTCTCT--AAAG-AGCA--TTGTGCACG-CTT-GTCATCTTT--ATGT---CTCCACC--TGTGCACATTTTGTAGA-CCT-GGA-T-CAC----TCT-CTGAAA-TG-CT-----AACCAGCAT---TTTAGGTTG---GAGGAATTTGACTT------TGT----TGTCTT----TCCTTGCA-TTT--CT--AGGTCTATGTT---TTTTCA-TATAA-TCT-------TATTGTG-ATATAATG-------------GGCCCTA-TA-T--AA-TATAAA----CTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAATATAT-------CAACC-TCTTTA--AA----TTTTGA-------GAGTGTTTGGA-TG--TGGGGG----TGTTATTTTGCTGGCCTTCTCC---------AA-GGTCAGCTCCCCTGAAATG-TATTAGCGGA----ACAATTTGTTGA--CC---GTTCA-TTGGTGTGATAGCA-TATCTACGC----TATTGA------T-GTA--AA----GC--AAGTT---CA--G-CTT-AT-AA-CAGTCC-ATTG-ACTTGGACAATT-CTCTATT-TA-TTAATGTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Cortinarius_anomalus                    ??????????????????????????????????CGGAAGGATCATTATTG-AAATAAACCTGATG-GGTTGCTGCTGGTTTTTT--AATG-AACA---TGTGCACA-CCT-GTTATCTTT--ATAT---TTCCACT--TGTGCACCTTTTGTAGA-CCT-GGA-T-AAG----TTTTCTTAA--TG--------CTAG-CA-----TTAAGGTTTTT-G-GG-A-CTGGCCT------T------TGTCTTT---TCCTTTCT-ATTATC---TGGTCTATGTT---TATTCA-TATA--CCCT-AATG-TAT-GT-TATAGAATGT--AATAA---TTGGGCCT--TG-TG-CC-TATAAA-----CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAATATAT-------CAACC-TCTTCA--GC----TTTTGCTTG-TT-GAGTG-TTGGA-TG--TGGGGGG------TCTTTTGCTGGCCTTTTTTT-------AGA-GGTCAGCTTCCCTAAAATT-TATTAGCGGA----ACAATTTGTTGA--CC---GTTCA-TTGGTGTGATAAT--TATCTACG----CTATTGA------C-GTG--AG----GC---AGTT---CA--G-CTT-CT-AA-CAGTCC-ATTG-ACTTGGACAG----TTTTCA----TTAATGTGACCTCAAATCAGGTAGGACTACCCGCTGAAGTTAA
		Hymenogaster_sp._nov._Trappe20345       ??????????????????????????????????????AGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTATT---GG-GGCA---TGTGCACA-CCT-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-AGA----CTTTCCGA---GG-C------AACTCGG-------TTGG------GAGGAA--TG-CTG------CA-------TC-AGCTTTCTTTGCG-CTT--CC--AGGCCTATGTT----TTTCA-TAAA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCTTC-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC-----TTTGC-TG-AT-AATGGCTTGGA-CG--TGGGGG----TTTTCTTTTGCCGGCTTCTT------CACTGAAGG-TCAGCTCCCCTTAAATT-CATTAGCTGG---TGCCCCGCCTGGA--CT---GTCTATTTGGTGTGATAAT--TATCTACACCG--TGGATGT-----CTTCA--AA--------GGGTTT-GCATTG-CTT-CT-AA-TAGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_subalpinus                 ?????????????????TTCCGTAAGGGAACCTGCGGAAGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTATT---GG-GGCA---TGTGCACA-CCT-GCCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-AGA----CTTTCCGA---GG-C------AACTCGG-------TTGG------GAGGAA--TG-CTG------CA-------TC-AGCTTTCTTTGCG-CTT--CC--AGGCCTATGTT----TTTCA-TAAA--CCC--GTAG-TAT-GT-AACAGAATGT---ATCA---TTGGGCTTC-AG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAACC-TTATTA--GC-----TTTGC-TG-AT-AATGGCTTGGA-CG--TGGGGG----TTTTCTTTTGCCGGCTTCTT------CACTGAAGG-TCAGCTCCCCTTAAATT-CATTAGCTGG---TGCCCCACCTGGA--CT---ATCTATTTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTTCA--AA--------GGGTTT-GCATTG-CTT-CT-AA-TAGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Hymenogaster_tener                      ?????????????????????????????????????????????????????????????????????????????????????????GG-GGGA---TATGCACA-CCC-ACCATTCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGGAT-AGAA----TTTCCGA---GG-C------AACTCGG-------TCTG------GAGGAA--TG-CTGCCC--TCTTT---AGGCAAGCTTTCTTTGTA-TTT--CC--TGGTCTACGTT----TTTCA-TATA--CCCC-TTAG-CAT-GT-AACAGAATGT---ATCAT--TTGGGCCCT-TG-TG-CC-TAGAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCNAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATCA--GT---TTATTTC-TG-AT-AGTGGCTTGGA-TG--TGGGGG------TTTTCTTGCTGGCT---------------GAGG-TCAGCTCCCCTTAAATG-CATTAGCTGG---TGCCCCGTGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGACC-ATGGATGT-----CTGCAATCA---TA-A-GGGTTTAGCACTG-CTTGCT-AAGCCGTCT-GTTA-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTA??????????????
		Naucoria_bohemica_AF124712              ????????????????????????????????????????????????TTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCCCTCAAGGG-GGCA---TGTGCACG-CCC-GCCATCCTC--ATCT---CTTCACC--TGTGCACCTCTTGTAGG-CTT-GGA-T-AGA-TTTTTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAA--TG-CTGCGC--TCTGT---GAGCCAGCTTT---TGCAATTTTTCC--AAGTCTATGTT----TTTCA-TATA--CCCCATTAG-TAC-GT-AACAGAATGT-----CA---TTGGGCGCTTAG-CG-CC-TATAAA---GTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATTA--GC----TTTTGC-TG-GTAAATGGCTTGGA-TG--TGGGGG----------CTTGCTGGCTTT---------------GG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCTGTGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCA--GGGATGT-----CTGCAAT-----------GGTTTTGCGCTG-CTT-CT-AA-CCGTCT-GTTC-ATTCGGACAATT-T----CAATG-ACAAT??????????????????????????????????????
		Naucoria_bohemica_IB19940290            ????????????????????????????????????????????????????????????????????????????TGGCCCCCTCAAGGG-GGCA---TGTGCACG-CCG-GC-ATCATC--ATCT---CTTCACC--TGTGCACCTTTTGTAGG-CTT-GGA-T-AGA-TTTTTTTCCGA----G-C-----ACACTCGG-------TCG-------GAGGAA--TG-CTGCGC--GCA------AGCCGGCTTTNTTTGCAATTTTTCC--AAGTGTATGTT----TTTCA-TATA--CCCCATTAG-TAC-GT-AACAGAATGT-----CA---TTGGGCGCTTAG-CG-CC-TATAAA---GTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATTA--GC----TTTTGC-TG-GTAAATGGCTTGGA-TG--TGGGGG----------CTTGCTGGCTTT---------------GG-TCAGCTCCCCTTAAATG-CATTAGCCGG---TGCCCTGTGTGGA--CT---GTCTACCTGGTGTGATAAT--TATCTAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Naucoria_escharoides                    ??????????????????????????????CCTGCGGAAGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTCTC--GGG-GGCA---TGTGCACA-CCC-ATCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-TGA----CTTTCCG----GG-C------AACTCGG-------TCGG------GAAGAT--TG-CTGCGC--TCTGT---GAGCCAGCTTTCTTTGCA-TGT--CC--AGGACTATGTT---TTTTCA-TATA--CCCCTATAG-AAT-GT-AACAGAATGT---ATCA---TTGGGCC-T-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATTA--AC----TTTTGT-TG-AT-AATGGATTGGA-TA--TGGGGG-----TTTCTTTTGCTGGCTTCTT------CACA-GAGA-TCAGCTCCCCTTAAATG-CATTAGCTGG---TGACCCGCGTGGA--CC---ATCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCAATCA--ATA-T-GGGTTTTGCACTG-CTT-CT-AA-CCGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
		Naucoria_scolecina                      ??????????????????????????????????????AGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTCTC--GGG-GGCA---TGTGCACA-CCC-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAAGAT--TG-CTGCGC--TCTGT---GAGCCAGCTTTCTTTGCA-TGT--CC--AGGCCTATGTT----TTTCA-TATA--CCCCTATAG-AAT-GT-AACAGAATGT---ATCA---TTGGGCC-T-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATTA--AC----TTTTGT-TG-AT-AATGGATTGGATTG--TGGGGG-----TTTCTTTTGCTGGCTTCTT------CACA-GAGA-TCAGCTCCCCTTAAATG-CATTAGCTGG---TGCCCCGCGTGGA--CC---ATCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCAATCA---TA-T-GGGTTTCGCACTG-CTT-CT-AA-CCGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 859 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
USERTYPE 2_1 STEPMATRIX = 4 
 A C G T 
 . 2 1 2 
 2 . 2 1 
 1 2 . 2 
 2 1 2 . 
 ; 
 
 OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 EXSET * dontwant = 1 - 53 81 - 92 97 - 99 108 - 112 121 - 123 128 - 130 138 139 157 161 167 171 - 174 183 - 185 188 190 - 195 203 - 209 214 - 219 226 227 230 234 - 251 265 - 274 286 - 290 300 301 336 - 338 345 - 348 351 - 357 \ 3 368 441 495 541 - 547 560 561 564 - 569 574 577 592 595 596 600 - 613 622 - 642 660 671 - 673 687 688 691 - 693 713 714 725 - 727 735 - 739 749 - 763 770 774 - 780 \ 3 792 803 - 805 807 - 810 813 816 822 - 859 ; 
 END;