NEXUS [File created by TreeBASE: 1/16/09 15:35:06] [Matrix accession#: M3852] BEGIN TAXA; TITLE M3852; DIMENSIONS NTAX=21; TAXLABELS Aristolochia_saccata_Asa_homo Aristolochia_westlandii_SETS36_homo Aristolochia_moupinensis_Mou2_homo Aristolochia_manshuriensis_SEST21_allele1 Aristolochia_manshuriensis_SEST21_allele2 Aristolochia_kaempferi_K642homo_K160allele2 Aristolochia_kaempferi_K160_allele1 Aristolochia_kaempferi_K158_allele2 Aristolochia_tanzawana_K95_homo Aristolochia_tanzawana_K555_allele1 Aristolochia_K555_2_K653homo_K61_2_K158_1_K437_1_AC2_2_AM2_2 Aristolochia_shimadai_Setu2_allele1 Aristolochia_shimadai_Setu2_allele2 Aristolochia_kaempferi_K580_homo Aristolochia_shimadai_K437_allele2 Aristolochia_kaempferi_K61_allele1 Aristolochia_K325homo_AS2allele1_AM2allele1 Aristolochia_shimadai_AS2_allele2 Aristolochia_liukiuensis_K32_homo Aristolochia_shimadai_K282_homo Aristolochia_cucurbitifolia_AC2_allele1 ; END; BEGIN CHARACTERS; TITLE M3852; DIMENSIONS NCHAR=573; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Aristolochia_saccata_Asa_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGATTATACATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAGGACTTGTCTTGGTAGGT Aristolochia_westlandii_SETS36_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCCAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTG------------------------------------ Aristolochia_moupinensis_Mou2_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTTTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGGTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGATTATCCATCTCACATCCCTTACACCTTCTGCGCGCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGAAGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_manshuriensis_SEST21_allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGCTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTGA---GGATTGTCTGGATGGTCATACTCCTTCCTTTGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_manshuriensis_SEST21_allele2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTGA---GGATTGTCTGGATGGTCATACTCCTTCCTTTGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_kaempferi_K642homo_K160allele2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATTTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGAATATCCATCTCACATCCCTTACACCTTCTGCGCTCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTT----TGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_kaempferi_K160_allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATTTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGAATATCCATCTCACATCCCTTACACCTTCTGCGCTCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTT----TGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_kaempferi_K158_allele2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAAAAGGAATATCCATCTCACATCCCTTACACCTTCTGCGCTCAACCTAGCCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTT----GGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_tanzawana_K95_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGTAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTTCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_tanzawana_K555_allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTTCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_K555_2_K653homo_K61_2_K158_1_K437_1_AC2_2_AM2_2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_shimadai_Setu2_allele1 TCTTCTCCAGCACGGGAAAGATGTCCGAGTTCAGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAAATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTTCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_shimadai_Setu2_allele2 TCTTCTCCAGCACGGGAAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTTCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_kaempferi_K580_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTTCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_shimadai_K437_allele2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---AGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCATGGTAGGT Aristolochia_kaempferi_K61_allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---AGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_K325homo_AS2allele1_AM2allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_shimadai_AS2_allele2 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGGGAAGATATAAACTCCCTCCCACCGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_liukiuensis_K32_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATCAACTCCCTCCCTCTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_shimadai_K282_homo TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGACATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTCAGTTATATCTTG---CATCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT Aristolochia_cucurbitifolia_AC2_allele1 TCTTCTCCAGCACGGGGAAGATGTCCGAGTTCTGCAGTCCCTCCACCACACTGGTGAAGTTGCTGGATCGATATCACAAGCAAGCGGGAAAGAAGCTTTGGGATGCTAAGCATGAGTATCTGAGCAATGAAGTTGAAAGAACCAAGAAAGAGAATGACAACATGCAGATCAAGCTGAGGCACTTGAAAGGCGAAGATATAAACTCCCTCCCACTGAAAGAACTCATGGCAATAGAGGAAGCACTTGAGGAAGGAGTTGCTGGTGTTCGTGCAAGGCAG---ATGGAAGCTTTAAAGATACATAAGAAGAAT---GGTAGAAACTTGGAAGAGGAGCACAAGTGCCTTAGTTATATCTTG---CACCAACAAGAACTGGCAATGCATGGGAATCTGAGAGAATTGGCTAATGGGTATCCAGAAAGAGAGAAGGATTATCCATCTCAGATCCCTTACACCTTCTGCGCGCAACCTAGTCAGCCCAATCTGCATCAGAAAAAGTAA---GGATTGTCTGGATGGTCATACTCCTTCCTTGGTCACCAAGATGATAAAAAGACTTGTCTTGGTAGGT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 573 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;