#NEXUS [written Sat Apr 17 10:58:44 EDT 2010 by Mesquite version 2.7 (build 510) at dhcp128036173166.med.yale.edu/128.36.173.166] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=23; TAXLABELS Trichoderma_aggressivum Hypocrea_aureoviridis Trichoderma_catoptron Hypocrea_chlorospora Hypocrea_cinnamomea Hypocrea_alni Trichoderma_harzianum_CBS_226.95 Trichoderma_harzianum_dis_218e Trichoderma_harzianum_dis_377a 'Trichoderma harzianum GJS 00-08' 'Trichoderma harzianum GJS 00-18' 'Trichoderma harzianum GJS 85-119' 'Trichoderma harzianum GJS 90-254' 'Trichoderma harzianum GJS 92-100' Hypocrea_brunneoviridis Hypocrea_epimyces Trichoderma_amazonicum_IB50 Trichoderma_amazonicum_LA90 Hypocrea_parepimyces Trichoderma_pleuroticola Trichoderma_pleurotum Hypocrea_straminella Trichoderma_virens ; END; BEGIN CHARACTERS; TITLE RPB2; DIMENSIONS NCHAR=876; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Trichoderma_aggressivum TGGGGTGATGAGAAGAAGGGGATGAGGTGAAGTGGAGGGGTGTGGGAGGTGGTTAATGGTTAGAGATTTGGTTGGAGGGTATGAGATTTGGGTGGTAGGA Hypocrea_aureoviridis tGGGGTGATGAGAAGAAAGGGATGAGTTGAAGAGGTGGTGTGTGGGAGGTGGTTAATGGTTAGAGGTTTGGTTGGAGGGTGTGAGATTTGGGGGGTAGGA Trichoderma_catoptron TGGGGTGATGAGAAGAAGGGGATGAGGTGGAGTGGAGGTGTGTGGGAGGTGGTTAAGGGTTAGAGGTTTGGTTGGAGGGTATGGGATTTGGGTGGTAGGA Hypocrea_chlorospora tGGGGTGATGAGAAGAAGGGGATGAGGTGAAGTGGAGGGGTGTGGGAGGTGGTTAAGGGGTAGAGGTTTGGTTGGAGGGTGTGAGATTTGGGTGGTAGGA Hypocrea_cinnamomea tGGGGTGATGAGAAGAAGGGGATGAGGTGAAGTGGAGGTGTGTGGGAGGTGGTTAAGGGTTAGAGGTTTGGTTGGAGGGTGTGGGATTTGGGTGGTAGGA Hypocrea_alni TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACCCTATCACATTTGCGTCGTACCA Trichoderma_harzianum_CBS_226.95 TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACGTTTGCTTCGACCCTATCACATTTGCGTCGTACCA Trichoderma_harzianum_dis_218e TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGCGTGTCCCAGGTGCTTAACCGTTACACGTTTGCTTCGACCCTATCACATTTGCGTCGTACCA Trichoderma_harzianum_dis_377a TGGGGTGATCAGAAGAAGGCCATGAGCTCGACTGCAGGTGTGTCACAGGTGCTTAACCGTTACACGTTTGCTTCGACCTTGTCACATTTGCGTCGTACCA 'Trichoderma harzianum GJS 00-08' TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGATACACGTTTGCTTCGACCCTGTCACATTTGCGTCGTACCA 'Trichoderma harzianum GJS 00-18' TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACGTTGTCACATTTGCGTCGTACCA 'Trichoderma harzianum GJS 85-119' TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGATACACGTTTGCTTCGACCCTGTCACATTTGCGTCGTACCA 'Trichoderma harzianum GJS 90-254' TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGCGTGTCCCAGGTGCTTAACCGATACACGTTTGCTTCGACCCTGTCACATTTGCGTCGTACCA 'Trichoderma harzianum GJS 92-100' TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCTGGTGTGTCTCAGGTGCTTAACCGTTACACATTTGCTTCGACCTTGTCACATTTGCGTCGTACCA Hypocrea_brunneoviridis TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACGTTCGCTTCGACCTTGTCACACTTGCGTCGTACCA Hypocrea_epimyces TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACCCTATCACATTTGCGTCGTACCA Trichoderma_amazonicum_IB50 TGGGGTGACCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACCCTATCCCATTTGCGTCGTACCA Trichoderma_amazonicum_LA90 TGGGGTGACCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACCCTATCCCATTTGCGTCGTACCA Hypocrea_parepimyces TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCCACCCTATCACATTTGCGTCGTACCA Trichoderma_pleuroticola TGGGGTGATTCTAAAAAGGCCATGAGCTCAACTGCTGGTGTGTCCCAGGTGCTCAACCGTTACACATTTGCTTCGACCCTATCCCATTTGCGTCGTACCA Trichoderma_pleurotum TGGGGTGATCAGAAGAAGGCCATGAGCTCAACTGCAGGTGTGTCCCAGGTGCTTAACCGTTACACATTTGCTTCGACCCTATCCCATTTGCGTCGTACCA Hypocrea_straminella tGGGGTGATGAGAAGAAGGGGATGAGGTGAAGTGGAGGTGTGTGGGAGGTGGTTAAGGGTTAGAGATTTGGTTGGAGTGTGTGAGATTTAGGTGGTAGGA Trichoderma_virens TGGGGTGATGAGAAGAAGGGGATGAGGTGAAGTGGTGGTGTGTGTGAGGTGGTTAAGGGTTAGAGGTTTGGTTGGAGGGTATGAGATTTGGGTGGTAGGA Trichoderma_aggressivum AGAGTGGTATGGGAAGAGATGGTAAGGTGGGGAAGGGTGGGGAGGTTGAGAAGAGGGATTGGGGTTTGGTGTGGGGGGGGGAGAGAGGGGAAGGAGAGGG Hypocrea_aureoviridis AGAGAGGGATTGGAAGAGATGGTAAAGTGGGGAAGGGTGGAGAGGTTGAGAAGAGGGATTGGGGGTTGGTGTGGGGGGGGGAGAGAGGGGAAGGGGAAGG Trichoderma_catoptron AGAGTGGGATGGGAAGAGATGGTAAGGTGGGGAAGGGTGGAGAGGTTGAGAAGAGGGATTGGGGTTTGGTGTGGGGAGGGGAGAGAGGGGAAGGAGAGGG Hypocrea_chlorospora AGAGAGGGATTGGAAGAGATGGGAAGTTGGGGAAGGGTGGAGAGGTTGAGAAGAGGGATTGGGGTTTGGTGTGGGGGGGGGAGAGAGGGGAAGGGGAAGG Hypocrea_cinnamomea AGAGTGGGATTGGAAGAGATGGTAAGGTGGGGAAGGGTGGAGAGGTTGAGAAGAGGGATTGGGGTTTGGTGTGGGGAGGGGAGAGAGGTGAAGGAGAGGG Hypocrea_alni ACACTCCTATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC Trichoderma_harzianum_CBS_226.95 ATACTCCTATCGGAAGAGATGGTAAGCTCGCAAAGCCTCGACAGCTTCACAACACGCACTGGGGTTTGGTCTGCCCGGCCGAGACACCCGAGGGACAGGC Trichoderma_harzianum_dis_218e ACACTCCTATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC Trichoderma_harzianum_dis_377a ATACTCCTATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGTCCTGCCGAGACACCCGAAGGACAGGC 'Trichoderma harzianum GJS 00-08' ACACTCCCATAGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTAGTCTGCCCAGCCGAGACACCCGAAGGACAGGC 'Trichoderma harzianum GJS 00-18' ACACACCTATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAAACACCCGAAGGACAGGC 'Trichoderma harzianum GJS 85-119' ACACTCCTATCGGAAGAGATGGCAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC 'Trichoderma harzianum GJS 90-254' ACACCCCTATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC 'Trichoderma harzianum GJS 92-100' ACACCCCTATCGGAAGAGATGGTAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC Hypocrea_brunneoviridis ACACTCCTATCGGAAGAGATGGCAAGCTGGCAAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACACCCGAAGGACAGGC Hypocrea_epimyces ACACTCCTATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGGCAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCAGCCGAGACTCCCGAAGGACAGGC Trichoderma_amazonicum_IB50 ACACTCCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAGACGCCCGAAGGACAGGC Trichoderma_amazonicum_LA90 ACACTCCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAGACGCCCGAAGGACAGGC Hypocrea_parepimyces ACACTCCTATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAGACACCCGAAGGACAGGC Trichoderma_pleuroticola ACACTCCTATCGGAAGAGATGGTAAGTTGGCGAATCCTCTACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAGACGCCCGAAGGACAGGC Trichoderma_pleurotum ACACTCCCATCGGAAGAGATGGTAAGCTGGCGAAGCCTCGACAGCTTCACAACACGCATTGGGGTTTGGTCTGCCCGGCCGAGACGCCCGAAGGACAGGC Hypocrea_straminella AGAGTGGGATTGGAAGAGATGGTAAGGTGGGGAAGGGTGGAGAGGTTGAGAATAGGGATTGGGGTTTGGTGTGGGGAGGGGAGAGAGGTGAAGGAGAGGG Trichoderma_virens AGAGGGGGATTGGAAGAGATGGTAAGGTGGGGAAGGGTGGAGAAGTTGAGAAGAGGGATTGGGGTTTGGTGTGTGGAGGGGAGAGAGGGGAAGGGGAGGG Trichoderma_aggressivum GTGTGGTGTGGTGAAGAAGTTGTGTTTGATGTGTTATGTGAGTGTGGGTTGTGGGTGGGAGGGTGTGATTGAGTTGATGATGAAGAGAGGTATGGAAGTG Hypocrea_aureoviridis GTGTGGTGTGGTGAAAAAGGTGTGGTTGATGTGTTAGGTGAGTGTGGGTTGGGGTTGGGAAGGTGTGATTGAGTTGATGATGAAGGGAGGTATGGAAGTG Trichoderma_catoptron TTGTGGTGTGGTGAAAAAGTTGTGTTTGATGTGGTAGGTGAGTGTTGGTTGTGGGTGGGAAGGTGTGATTGAGTTGATGATGAAGAGAGGTATGGAAGTG Hypocrea_chlorospora TTGTGGTGTTGTGAAAAATGTGTGGTTGATGTGTTATGTGAGTGTGGGTTGGGGATGTGAAGGTGTGATTGAGTTGATGATGAAGGGAGGTATGGAAGTT Hypocrea_cinnamomea TTGTGGTGTAGTGAAAAAGTTGTGTTTGATGTGTTAGGTGAGTGTGGGTTGTGGGTGGGAAGGTGTGATTGAGTTGATGATGAAGAGAGGTATGGAAGTG Hypocrea_alni CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCTGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTG Trichoderma_harzianum_CBS_226.95 TTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAACCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC Trichoderma_harzianum_dis_218e CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAACCTCTGATTGAGTTCATGATCAACAGAGGTATDGAAGTC Trichoderma_harzianum_dis_377a CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAATTCATGATCAACAGAGGTATGGAGGTC 'Trichoderma harzianum GJS 00-08' CTGTGGTCTGGTCAAGAACCTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC 'Trichoderma harzianum GJS 00-18' CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAACCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC 'Trichoderma harzianum GJS 85-119' TTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAGGTC 'Trichoderma harzianum GJS 90-254' CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCTGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTT 'Trichoderma harzianum GJS 92-100' TTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCTGAACCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC Hypocrea_brunneoviridis CTGTGGTCTGGTCAAAAACCTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAACCTCTGATTGAATTCATGATCAACAGAGGTATGGAAGTC Hypocrea_epimyces CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGCTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC Trichoderma_amazonicum_IB50 CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGCATGGAAGTC Trichoderma_amazonicum_LA90 CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGCATGGAAGTC Hypocrea_parepimyces CTGTGGGCTGGTCAAGAACTTATCTTTGATGTGTTACGTCAGTGTCGGTTCTCCATCCGAGCCTCTGATTGAGTTCATGATCAACAGAGGTATGGAAGTC Trichoderma_pleuroticola CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTTTCGGTTCTCCCTCCGAACCTCTGATTGAGTTCATGATCAACAGAGGCATGGAAGTC Trichoderma_pleurotum CTGTGGTCTGGTCAAGAACTTGTCTTTGATGTGTTACGTCAGTGTCGGTTCTCCCTCCGAACCTCTGATTGAGTTCATGATCAACAGAGGCATGGAAGTC Hypocrea_straminella TTGTGGTGTGGTGAAAAAGTTGTGTTTGATGTGTTAGGTGAGTGTGGGGTGTGGTTGGGAAGGTGTGATTGAGTTGATGATGAAGAGAGGTATGGAAGTG Trichoderma_virens TTGTGGTGTGGTGAAAAAGTTGTGTGTGATGTGGTAGGTGAGTGTGGGTTGTGGGTGGGAAGGAGTGATTGAGTTGATGATGAAGAGAGGTATGGAAGTG Trichoderma_aggressivum GTGGAAGAGTAGGAGGGGGTGGGGTATGGTGATGGTAGGAAGATTTTTGTGAAGGGTGTGTGGGTGGGAGTTGAGGAAGAGGGTAAAGATTTGGTGAAGG Hypocrea_aureoviridis GGGGAAGAGTAGGAGGGAGTGGGATATGGGGGGGGTAGGAAGATTTTTGTGAATGGGGTGTGGGGGGGAGTGAGGGAAGAGGGTAAGGGGGTGGTGAAGG Trichoderma_catoptron GTGGAAGAGTAGGAGGGGGTGGGGTATGGTGATGGTAGGAAGATTTTTGTGAAGGGTGTGTGGGTTGGAGTTGAGGAAGAGGGTAAGGAGTTGGTGAAGG Hypocrea_chlorospora GTAGAGGAGTATGAGGGAGTAGGATATGGTGATGGTAGGAAGATTTTTGTGAAGGGTGTATGGGTTGGAGTTGAGGAAGATGGGAAGGAGGTGGTGAAGG Hypocrea_cinnamomea GTGGAAGAGTAGGAGGGGGTGGGTTATGGTGATGGGAGAAAGATGTTTGTGAAGGGGGTGTGGGTTGGAGTTGAGGAAGAGGGTAAGGAGTTGGTGAAGG Hypocrea_alni GTCGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACCAAGATTTTTGTGAACGGTGTCTGGGTCGGAATTCACCAAGACCCTAAGCACTTGGTGAACC Trichoderma_harzianum_CBS_226.95 GTGGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTCCACCAAGACCCTAAGCACTTGGTGAACC Trichoderma_harzianum_dis_218e GTTGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC Trichoderma_harzianum_dis_377a GTCGAAGAGTATGAGCCGCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC 'Trichoderma harzianum GJS 00-08' GTCGAAGAGTATGAGCCTCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC 'Trichoderma harzianum GJS 00-18' GTCGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTCCACCAAGACCCTAAGCACTTGGTGAACC 'Trichoderma harzianum GJS 85-119' GTCGAAGAGTACGAGCCTCTGCGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC 'Trichoderma harzianum GJS 90-254' GTCGAAGAGTACGAGCCGCTGAGGTATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC 'Trichoderma harzianum GJS 92-100' GTCGAAGAATACGAGCCTCTGCGATATCCTCATGCTACAAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCACTTGGTGAACC Hypocrea_brunneoviridis GTCGAGGAGTACGAGCCGCTGCGGTATCCTCATGCTACAAAGATTTTCGTGAACGGTGTCTGGGTTGGAGTCCACCAAGACCCTAAGCACTTGGTGAACC Hypocrea_epimyces GTCGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACCAAGATTTTTGTGAACGGTGTCTGGGTCGGAGTTCACCAAGACCCGAAGCACTTGGTGAACC Trichoderma_amazonicum_IB50 GTCGAAGAGTACGAGCCGCTGCGGTATCCTCACGCTACCAAGATTTTTGTCAACGGTGTCTGGGTCGGAGTTCACCAAGACCCCAAGCACTTGGTGAACC Trichoderma_amazonicum_LA90 GTCGAAGAGTACGAGCCGCTGCGGTATCCTCACGCTACCAAGATTTTTGTCAACGGTGTCTGGGTCGGAGTTCACCAAGACCCCAAGCACTTGGTGAACC Hypocrea_parepimyces GTCGAAGAGTACGAGCCTCTGCGGTATCCTCATGCTACCAAGATTTTTGTGAACGGTGTCTGGGTTGGAGTTCACCAAGACCCTAAGCATTTGGTGAACC Trichoderma_pleuroticola GTCGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACCAAGATTTTTGTCAACGGTGTCTGGGTCGGAGTTCACCAAGACCCCAAGCACTTGGTGAACC Trichoderma_pleurotum GTCGAAGAGTACGAGCCGCTGCGGTATCCTCATGCTACCAAGATTTTTGTCAACGGTGTCTGGGTCGGAGTTCACCAAGACCCCAAGCACTTGGTGAACC Hypocrea_straminella GTGGAAGAGTAGGAGGGGGTGGGTTATGGTGATGGTAGAAAGATTTTTGTGAAGGGTGTGTGGGTTGGAGTTGAGGAAGAGGGTAAGGAGTTGGTGAAGG Trichoderma_virens GTGGAAGAGTAGGAGGGGGTGGGATATGGTGATGGTAGGAAGATTTTGGTGAAGGGTGTGTGGGTTGGAGTTGAGGAAGAGGGTAAGGATGTGGTGAAGG Trichoderma_aggressivum AGGTTGTGGAGAGTGGTGGGAAGTGGTATGTGGAGTAGGAAGTGTGTGTGGTGAGAGAGATGAGAGAGGAGGAATTGAAAATGTTTTGGGAGGGAGGGGG Hypocrea_aureoviridis AGGTTGTGGAGGGTGGGGGGGAGTGTTATTTGGAGTAGGAAGTGTGTGTGGTGAGAGAAATTGGAGAGGAGGAGTTGAAAATGTTTTGGGAGGGAGGTGG Trichoderma_catoptron AGGTTGTGGAGAGTGGTGGGAAGTGGTATGTGGAGTAGGAAGTGTGTGTTGTGAGAGAAATTGGAGAGGAGGAATTGAAAATGTTTTGGGAGGGAGGGGG Hypocrea_chlorospora AGGTTGTGGAGAGTGGTGGGAAGTGTTAGTTGGAGTAGGAAGTGTGTGTGGTGAGAGAAATTGGAGAGGAGGAATTGAAAATGTTTTGGGAGGGGGGGGG Hypocrea_cinnamomea AGGTTGTGGAGAGTGGTGGGAAGTGGTATGTGGAGTAGGAAGTGTGTGTGGTGAGAGAAATTGGAGAGGAGGAATTGAAAATGTTGTGGGAGGGAGGGGG Hypocrea_alni AGGTTCTAGACACTCGTCGCAAGTCCTATCTCCAGTACGAAGTCTCTCTCGTGAGAGAAATCCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG Trichoderma_harzianum_CBS_226.95 AGGTCCTGGACACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTCCGACCGCAGGCCG Trichoderma_harzianum_dis_218e AGGTCCTGGACACTCGTCGCAAGTCCTATCTGCAGTACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGTCG Trichoderma_harzianum_dis_377a AGGTTCTGGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG 'Trichoderma harzianum GJS 00-08' AGGTTCTAGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGTCG 'Trichoderma harzianum GJS 00-18' AGGTCCTGGACACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG 'Trichoderma harzianum GJS 85-119' AGGTCCTGGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG 'Trichoderma harzianum GJS 90-254' AGGTTCTGGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAG-aATTCGAGACCAGGAATTTAAAATCTTTTCCGACGCAGGTCG 'Trichoderma harzianum GJS 92-100' AGGTTCTGGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG Hypocrea_brunneoviridis AGGTTCTGGACACTCGTCGCAAGTCCTATCTGCAGTACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG Hypocrea_epimyces AGGTCCTGGACACTCGTCGCAAGTCCTATCTGCAGTACGAAGTCTCTCTCGTGAGAGAAATTCGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG Trichoderma_amazonicum_IB50 AGGTTCTGGACACTCGTCGCAAGTCCTATCTGCAGTACGAAGTCTCCCTCGTGAGAGAAATCCGAGACCAGGAATTCAAAATCTTTTCCGACGCTGGCCG Trichoderma_amazonicum_LA90 AGGTTCTGGACACTCGTCGCAAGTCCTATCTGCAGTACGAAGTCTCCCTCGTGAGAGAAATCCGAGACCAGGAATTCAAAATCTTTTCCGACGCTGGCCG Hypocrea_parepimyces AGGTTCTGGACACTCGTCGCAAGTCCTATCTCCAGTACGAAGTCTCTCTCGTGAGAGAAATCAGAGACCAGGAATTCAAAATCTTTTCCGACGCAGGCCG Trichoderma_pleuroticola AGGTCCTGGACACTCGTCGCAAGTCCTATCTGCAATACGAAGTCTCTCTCGTGAGAGAAATCCGAGACCAGGAATTCAAAATCTTTTCCGACGCTGGCCG Trichoderma_pleurotum AGGTCCTGGATACTCGTCGCAAGTCCTATCTGCAATACGAAGTTTCTCTCGTGAGAGAAATCCGAGACCAGGAATTCAAAATCTTTTCCGACGCTGGCCG Hypocrea_straminella AGGTTGTGGAGAGTGGTGGGAAGTGGTATGTGGAGTAGGAAGTGTGTGTGGTGAGAGAAATTGGAGAGGAGGAGTTGAAGATGTTTTGTGAGGGAGGTGG Trichoderma_virens AGGTTGTAGAGAGTGGTGGGAAATGGTATGTGGAGTAGGAAGTGTGTGTGGTGAGAGAGATTGGAGAGGAGGAATTGAAAATGTTTTGGGATGGAGGGGG Trichoderma_aggressivum TGTGATGGGAGGAGTGTTTAGGGTTGAGGAGGAAGATGAGGGGGAAAGGGGGATGAAGAAGGGGGAGGTGGTATTGAGGAAGGAGGTGGTGAATAGATTG Hypocrea_aureoviridis TGTGATGGGGGGGGTGTTTAGAGTTGAGGAGGAAGATGAGGGTGAAAGGGGGATGAAGAAGGGTGATGTGGTATTGAGGAAGGAAGTGGTGAAGAGAGTG Trichoderma_catoptron TGTGATGGGAGGTGTATTTAGGGTTGAGGAGGAAGATGAGGGGGAAAGGGGGATGAAGAAGGGGGAGGTTGTATTGAGGAAGGAGGTGGTGAATAGATTG Hypocrea_chlorospora TGTGATGGGAGGTGTGTTTAGGGTGGAGGAAGAAGATGAGGGTGAAAGGGGTATTAAGAAGGGGGATTTGGTAGTGAGGAAGGAAGTGGTGAATAGGGTG Hypocrea_cinnamomea TGTGATGGGAGGTGTGTTTAGTGTTGAGGAGGAAGATGAGGGGGAAAGGGGGATGAAGAAGGGGGAGGTGGTATTGAGGAAGGAGGTGGTGAATAGATTG Hypocrea_alni TGTCATGCGACCAGTCTTTACCGTTCAACAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_harzianum_CBS_226.95 TGTAATGCGGCCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_harzianum_dis_218e TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGATCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_harzianum_dis_377a TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTTTTGACCAAGGAGCTCGTCAATAGATTG 'Trichoderma harzianum GJS 00-08' TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG 'Trichoderma harzianum GJS 00-18' TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGGCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG 'Trichoderma harzianum GJS 85-119' TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG 'Trichoderma harzianum GJS 90-254' TGTCATGCGACCAGTCTTTACCGTTCAACAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG 'Trichoderma harzianum GJS 92-100' TGTCATGCGACCTGTCTTTACCGTTCAGCAGGAAGATGACCCCGAAACGGGCATCAACAAGGGCCACCTTGTATTGACCAAGGAACTCGTCAATAGATTG Hypocrea_brunneoviridis TGTCATGCGACCCGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGGTTG Hypocrea_epimyces TGTCATGCGACCCGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_amazonicum_IB50 TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_amazonicum_LA90 TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Hypocrea_parepimyces TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCAGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_pleuroticola TGTCATGCGACCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGATTG Trichoderma_pleurotum TGTCATGCGGCCAGTCTTTACCGTTCAGCAGGAAGATGACCCGGAAACGGGCATCAACAAGGGCCACCTGGTATTGACCAAGGAGCTCGTCAATAGGTTG Hypocrea_straminella TGTGATGGGAGGTGTGTTGAGTGTTGAGGAGGAAGATGAGGGGGAAAGGGGGATGAAGAAGGGGGAGGTTGTATTGAGGAAGGAGGTGGTGAATAGAGTG Trichoderma_virens TGTGATGGGAGGTGTATTTAGGGTTGAGGAGGAGGATGAGGGTGAAAGAGGGATGAAGAAGGGGGAGGTGGTATTGAGGAAGGAGGTGGTGAAGAGATTG Trichoderma_aggressivum GGGAAGGAGGAGGGTGAGGGTGGGGAAGAGGGGAGGATGAAGATTGGATGGGAGGGATTAATGAGGGGTGGTGGGGTTGAATATGTGGATGGGGAGGAAG Hypocrea_aureoviridis GGGAAAGAGGAGGGGGAAGGGGGAGAGGAGGGAAGGATGAAGATGGGGTGGGAGGGGTTGATGAGGGGTGGTGGGGTTGAATATGTGGAGGGGGAGGAAG Trichoderma_catoptron GGGAAGGAGGAGGGTGAAGGTGGGGAAGAGGGGAGGATGAAGATTGGGTGGGAGGGATTAATGAGGGGTGGTGGGGTTGAATATGTGGAGGGGGAGGAAG Hypocrea_chlorospora GGGAAGGAGGAGGGGGAAGGTGGAGAGGAGGGGAGGATGAAGATTGGATGGGAGGGATTGATGAGGGGTGGTGGAGTTGAATATGTGGAGGGGGAGGAAG Hypocrea_cinnamomea GGGAAGGAGGAGGGTGAAGGTGGGGAAGATGGTAGGATGAAGATGGGATGGGAGGGATTAATGAGAGGGGGTGGGGTTGAATATGTGGAGGGGGAGGAAG Hypocrea_alni GCCAAGGAGCAGGCCGAGCCTCCGGAAGACCCCAGCATGAAGATGGGATGGGAGGGATTGATTAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Trichoderma_harzianum_CBS_226.95 GCCAAGGAGCAGGCTGAACCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATTAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Trichoderma_harzianum_dis_218e GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATTAGGGCTGGTGCAGTTGAATATCTCGACGCCGAAGAAG Trichoderma_harzianum_dis_377a GCCAAGGAGCAAGCTGAACCTCCGGAAGACCCTAGCATGAAGATCGGATGGGAGGGACTGATTAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG 'Trichoderma harzianum GJS 00-08' GCTAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATTAGGGCTGGTGCAGTTGAATATCTCGACGCTGAGGAAG 'Trichoderma harzianum GJS 00-18' GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATTAGGGCTGGTGCAGTTGAATATCTCGACGCCGAAGAAG 'Trichoderma harzianum GJS 85-119' GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG 'Trichoderma harzianum GJS 90-254' GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG 'Trichoderma harzianum GJS 92-100' GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Hypocrea_brunneoviridis GCCAAGGAGCAGGCTGAACCTCCAGAAGACCCCAGCATGAAGATTGGATGGGAGGGATTGATCAGGGCTGGTGCGGTTGAGTATCTCGACGCCGAGGAAG Hypocrea_epimyces GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATCGGATGGGAGGGATTAATTAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Trichoderma_amazonicum_IB50 GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCCTGAAGATTGGATGGGAGGGATTAATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Trichoderma_amazonicum_LA90 GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCCTGAAGATTGGATGGGAGGGATTAATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Hypocrea_parepimyces GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCATGAAGATCGGATGGGAGGGATTAATTAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Trichoderma_pleuroticola GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCCTGAAGATTGGATGGGAGGGATTAATCAGGGCTGGTGCGGTTGAATATCTTGACGCCGAGGAAG Trichoderma_pleurotum GCCAAGGAGCAGGCTGAGCCTCCGGAAGACCCCAGCCTGAAGATTGGATGGGAGGGATTAATCAGGGCTGGTGCGGTTGAATATCTCGACGCCGAGGAAG Hypocrea_straminella GGGAAGGAGGAGGGTGAAGGTGGGGAAGATGGGAGGATGAAGATGGGATGGGAGGGATTAATGAGAGGGGGTGGGGTTGAATATGTTGAGGGGGAGGAAG Trichoderma_virens GGTAAGGAGGAAGGTGAAGGTGGGGAAGAGGGGAGGATGAAGATTGGATGGGAGGGAGTAATGAGGGGTGGTGGGGTTGAATATGTGGAGGGGGAAGAAG Trichoderma_aggressivum AGGAGAGGTGGATGATGTGGATGAGGGGAGAGGATGTGGAGGTGTATGGTGTTGAAAAGGGGGGTATTAAGAGGGAGGAAGAGATGGGAGATGATGGGAA Hypocrea_aureoviridis AGGAGAGATGGATGATTTGGATGAGTGGAGAAGATGTGGAGGTGTATGGTGTTGAAAAGGGGGGTATTTGTAGGGAAGAGGAGATGGGAGATGATGGGAA Trichoderma_catoptron AGGAGAGTTGGATGATGTGGATGAGGGGAGAGGATGTGGAAGTGTATGGTGTTGAGAAGGGGGGGATGTGTAGGGAGGAAGAGATGGGAGATGATGGGAA Hypocrea_chlorospora AGGAGAGGTGGATGATGTGGATGAGAGGAGAAGATGTGGAGGTTTATGGGGTTGAAAAGGGTGGTATGTGTAGTGAAGAGGAGATGGGAGAGGATGGGAA Hypocrea_cinnamomea AGGAGAGGTGGATGATGTGGATGAGGGGGGAGGATGTTGAGGTGTATGGTGTTGAGAAGGGGGGTATTTGTAGTGAGGAAGAGATGGGAGATGATGGGAA Hypocrea_alni AGGAGACGTCCATGATCTGCATGACACCAGAGGATCTCGAAATGTATCGTCTTCAGAAGGCCGGTATTAACACCGAGGAAGACATGGGAGATGATCCGAA Trichoderma_harzianum_CBS_226.95 AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCTGGTATTAACACTGAGGAAGACATGGGAGATGACCCGAA Trichoderma_harzianum_dis_218e AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGAC----- Trichoderma_harzianum_dis_377a AGGAGACGTCCATGATCTGCATGACGCCTGAGGATCTCGAGCTGTATCGCCTTCAGAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGAT----- 'Trichoderma harzianum GJS 00-08' AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGAT----- 'Trichoderma harzianum GJS 00-18' AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGAT----- 'Trichoderma harzianum GJS 85-119' AGGAGACGTCTATGATCTGCATGACGCCAGAGGATCTCGAGTTGTACCGTCTTCAGAAGGCCGGTATCAACACTGAGGAAGACATGGGAGATGAT----- 'Trichoderma harzianum GJS 90-254' AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGACCCGAA 'Trichoderma harzianum GJS 92-100' AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTAACACCGAGGAAGACATGGGAGATGAT----- Hypocrea_brunneoviridis AGGAGACGTCCATGATCTGCATGACGCCAGAAGATCTCGAGCTGTATCGTCTTCAGAAGGCCGGTATTTCCACTGAGGAAGACATGGCAGATGATCCGAA Hypocrea_epimyces AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATTAACACTGAGGAAGACATGGGAGATGATCCGAA Trichoderma_amazonicum_IB50 AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATCAACACTGAGGAGGACATGGGAGATGATCCGAA Trichoderma_amazonicum_LA90 AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATCAACACTGAGGAGGACATGGGAGATGATCCGAA Hypocrea_parepimyces AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATTAACACCGAGGAAGACATGGGAGACGATCCGAA Trichoderma_pleuroticola AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATCAACACTGAGGAGGACATGGGAGATGATCCGAA Trichoderma_pleurotum AGGAGACGTCCATGATCTGCATGACGCCAGAGGATCTCGAGCTGTATCGTCTTCAAAAGGCCGGTATCAACACGGAGGAGGACATGGGAGATGATCCGAA Hypocrea_straminella AGGAGAGGTGTATGATGTGGATGAGGGGAGAGGATGTGGAGGTGTATGGTGTTGAGAAGGGGGGTATTTGGAGTGATGAAGAGATGGGAGATGATGGGAA Trichoderma_virens AGGAGAGGTGGATGATTTGGATGAGAGGAGAGGATGTGGAGGTGTATGGTGTTGAGAAAGGGGGTATGTGTAGGGATGAAGAGATGGGAGATGATG---- Trichoderma_aggressivum GAAGGGAGTGAAGAGAAAGAGAAAGGGGAGAAGTGAGATGTAGAGGGATTGGGAGATTGAGGGAAGTATGATGTTA Hypocrea_aureoviridis TAAGGGAGTGAAGAGAAAGAGAAAGGGAAGAAGTGAGATGTAGAGTGATTGTGAAATTGAGGGAAGGATGATATTG Trichoderma_catoptron GAAGGGAGTAAAGAGGAAGAGAAAGGGGAGGAGTGAGATGTATAGGGATTGGGAGATTGAGGGAAGTATGATGTTA Hypocrea_chlorospora GAAGGGATTGAAAAGAAGGAGAAAGGGAAGAAGTGAGATGTAGAGTGATTGTGAGATTGATGGAAGGATGATTTTG Hypocrea_cinnamomea GAAGGGAGTAAAGAGAAAGAGAAATGGGAGAAGGGAGATGTAGAGGGATTGGGAGATTGAGGGAAGTATGATTTTA Hypocrea_alni CAAGCGACTCAAGACAAAGACAAACCCCACAACTCACATGTACACCCATTGCGAGATTCATCCAAGTATGATCTTA Trichoderma_harzianum_CBS_226.95 CAAGCGACTAAAGACCAAGACAAACCCGACTACTCACATGTACACCCATTGCGAGATTCACCCAAGTATGATCTTA Trichoderma_harzianum_dis_218e ---------------------------------------------------------------------------- Trichoderma_harzianum_dis_377a ---------------------------------------------------------------------------- 'Trichoderma harzianum GJS 00-08' ---------------------------------------------------------------------------- 'Trichoderma harzianum GJS 00-18' ---------------------------------------------------------------------------- 'Trichoderma harzianum GJS 85-119' ---------------------------------------------------------------------------- 'Trichoderma harzianum GJS 90-254' CAAGCGACTAAAGACCAAGACGAACCCGACAACTCACATGTACACCCATTGCGAGATTCACCCAAGTATGATCTTA 'Trichoderma harzianum GJS 92-100' ---------------------------------------------------------------------------- Hypocrea_brunneoviridis CAAGCGACTAAAGACCAAGACAAACCCGACAACTCACATGTACACCCATTGCGAGATTCACCCAAGTATGATCTTA Hypocrea_epimyces CAAGCGACTCAAGACAAAGACAAACCCCACAACTCACATGTACACCCATTGCGAGATTCAACCAAGTATGATCTTA Trichoderma_amazonicum_IB50 CAAGCGACTCAAGACCAAGACAAACCCCACAACTCACATGTACACCCATTGCGAGAT------------------- Trichoderma_amazonicum_LA90 CAAGCGACTCAAGACCAAGA-------------------------------------------------------- Hypocrea_parepimyces CAAGCGACTCAAGACCAAGACAAACCCCACAACTCACATGTATACCCATTGCGAGATTCACCCAAGTATGATCTTG Trichoderma_pleuroticola CAAGCGACTCAAGACCAAGACAAACCCCACAACTCACATGTACACCCATTGCGAGATTCACCCAAGTATGATCTTA Trichoderma_pleurotum CAAGCGACTCAAGACCAAGACAAACCCCACAACTCACATGTACACCCATTGCGAGATTCACCCAAGTATGATTCTA Hypocrea_straminella GAAGGGAGTAAAGAGAAAGAGAAAGGGGAGAAGTGAGATGTAGAGGGATTGGGAGATTGATGGAAGTATGATGTTA Trichoderma_virens ---------------------------------------------------------------------------- ; END; BEGIN CHARACTERS; TITLE ITS; DIMENSIONS NCHAR=680; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Trichoderma_aggressivum ACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--cCAAAACTCTTATT-------------gTATACCCCCTCGCGGG---------TTATTTTTACTATCTGAGCC-tTCTCGGCG-cCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTC-gC-------gGG--gGCCGTCTCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aAC-tTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCCGCTGAACTTAAGCATATCAATAAG-------- Hypocrea_aureoviridis ACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGCTACCAAACCGTTGCCTCGGCGGGATC-tCTGCCCCGGGCGCTTCGCGGCCCCGGACCCAAGGCGCCCCGCCGGAGGAAGAAACAAC--c-aAAACTCCTTTTCCCCATGCCCCTCGCACGCCCCCTCGCGGGCCGCGTCGGGCTCTCTCTCTGAGCAAAAC-tTCTCGGCGCCCCTCACCGGGCGCCTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAGCCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCC-TCCTCCCTCCGCGGGCGGGG-gGCCGGCCCCGAAATTCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCAATGCCGTAAAACAACCCAAACCTTCTGGAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAGCG------ Trichoderma_catoptron ---------------------cTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACCGTTGCCTCGGCGGGATCTTCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--cAAAAACTCCCTTC-------------gCATGCCCCCTCGCGGG----------TTTTTTCACAATCTGAGCC-tTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCCCC--gGGGGGTCGGCGTTGGGGATCGGCC-TCCCTCTGC-------gGG--gGCCGTCTCCGAAATGCAGTGGCGGTCCCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGCCCACAGCCGTTAAACACCCCAAAC--TCCGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATA-------------- Hypocrea_chlorospora --------------------aCTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGAAAAACAACCAAAACTCTT-tT-------------gTATACCCCCTCGCGGG----------TTTTCTTACTTCTGAGAAC-tTCTCGGCGCCCCTTAGCGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTCGC-------gGGGCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCATCGGGAGCGCGGCGCGTCCAATGCCGTAAAACACCC--aACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAA------------ Hypocrea_cinnamomea ---------------------cTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCACTGTGAACGTTACCAAACCGTTGCCTCGGCGGGATCTTCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGAACCAA--cCAAAACTC---tT-------------gCATACCCCCTCGCGGG---------TTTTTTCCACAATCTGAGCC-tTCTCGGCG-cCCCTCGCGGGCGTTCCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGTCCGGCGTTGGGGATCGGCCCTCCTCTCGC-------gGG--gGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCCCCTGCGCAGTAGCTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACGGCCGTTAAACAACCC-aACTCTCTGGAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATAT--------------- Hypocrea_alni -------------------------------------------------aCTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--cCAAAACTCTTATT-------------gTGTACCCCCTCGCGGG----------TTTATTTATAATCTGAGCC-tTCTCGGCGCCCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCGCG-------gGG--aGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aAC-tTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAGCGG----- Trichoderma_harzianum_CBS_226.95 ---------------------------------c---ACCGAATTTA-aACTCCCAAACCCAATGTGAACGTTACCAAACTG-tGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAAGACCAAC--cTAAAACTCTTATT-------------gTATACCCCCTCGCGGG--------TTTTTTTTTATAATCTGAGCC-tTCTCGGCG-cCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCCAACAACGGAATCTCTTGGTTCTGGCATCGATAAAGAACCCACCAAAATGCAATAAATAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGC-------gGG-tGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aAC-tTCTGAAATGTTGACCTCGGAT------------------------------------------------ Trichoderma_harzianum_dis_218e --AAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-TCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTATT-------------GTATACCCCCTCGCGGG?????-----TTTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGCG------GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAA??------------------- Trichoderma_harzianum_dis_377a --AAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-TCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTTTT-------------GTATACCCCCTCGCGGG????-----TTTTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGCG------GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAAGC------------------- 'Trichoderma harzianum GJS 00-08' --AAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-TCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTATT-------------GTATACCCCCTCGCGGG?????-----TTTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGCG------GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAAGC------------------- 'Trichoderma harzianum GJS 00-18' --???????CCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGAT?-T?TGCCCCGGGTG?GT?GCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTATT-------------GTATACCCCCTCGCGGG-----TTTTTTTTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGCG------GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAAGC------------------- 'Trichoderma harzianum GJS 85-119' --AAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-TCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTTTT-------------GTATACCCCCTCGCGGG-----??????TTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTGCCTCTTGGC-----GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAAGC------------------- 'Trichoderma harzianum GJS 90-254' --aAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG----------TTTTTTTATAATCTGAGCC-tTCTCGGCG-cCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTGCCTTGGC-------gGT--gGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aAC-tTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGC------------------- 'Trichoderma harzianum GJS 92-100' --AAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-TCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------CGCCCGCCGGAGGACCAAC--C?AAAACTCTTATT-------------GTATACCCCCTCGCGGG?????-----TTTTTTTATAATCTGAGCC?TTCTCGGCG-CCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT?CAACAACGG?ATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--GGGGGGTCGGCGTTGGGGATCGGCCCTGCCTTGGC-----??GGT--GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-ACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC?-AAC?TTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-CCCGCTGAACTTAAGC------------------- Hypocrea_brunneoviridis ----------------------------aGGA-CATTACCGAGTTTACAACTCCCAAACCCAGTGTGAACGCTACCGAACCGTTGCCTCGGCGGGATC-tCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAA--cCGAAACCCTTGAT-------------gTACACCCCCTCGCGGG---------TTTTCCACGTGATCTGAGCC-tTCCCGGCG-cCCCCCGCGGGCGCCCCGAAAACGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTCCGAGCGTCATGTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTC-gC-------gGG--GGCCGTCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCCCCTGCGCAGTAGTTTGCAC-gCTCGCACCGGGAGCGCGGCGCGTCCACGGCCGTTAAACACCC--aACTCTCCGGAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAGCGG----- Hypocrea_epimyces -------------------------------------------------------------------------------------cCTCGGCGGGATC-tCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--cCAAAACTCTTGTT-------------gTATACCCCCTCGCGGG------TTTTCCTTTTTACTATCTGAGCCTTTCTCGGCGCCCCCTCGTGGGCGTCTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCGCG-------gTG--gGCCGTCTCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACGGCCGTTAAACACCC--aACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAGCGG----- Trichoderma_amazonicum_IB50 ----------------------aGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG-----------TTTTTTATAATCTGAGCC-tTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGC-------gGG--gGCCGTCTCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCC-------------------------------- Trichoderma_amazonicum_LA90 -----------------------------------tTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG-----------TTTTTTATAATCTGAGCC-tTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGC-------gGG--gGCCGTCTCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aACTTTCTGAAATGTTGACCTCGGA------------------------------------------------- Hypocrea_parepimyces ---------------------------------cATTACCGAGTTTACAACTCCCAAACCCAATGTGAACATTACCAAACCGTTGCCTCGGCGGGATC-tCTGCCCCGGGCGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--cCAAAACTCTTATT-------------gTATACCCCCTCGCGGG-TTTTCATTTTATCTTTACTATCTGAGCC-tTCTCGGCGCCCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCGCG-------gTG--gGCCGTCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aACTTTCCGAAACGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAGCGG----- Trichoderma_pleuroticola ACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG----------TTTTTTTATAATCTGAGCC-tTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGC-------gGG--gGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAATAAAGCGGAGGA Trichoderma_pleurotum ACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG----------TTTTTTTATAATCTGAGCC-tTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGC-------gGG--gGCCGTCTCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCAAA----------- Hypocrea_straminella ---------------------cTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTTCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGAATCAA--cCAAAACTCTTATT-------------gTATACCCCCTCGCGGG-----------TTTTTTATAATCTGAGCC-tTCTCGGCG-cCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCC-TCCTTTA-C-------gGG--gGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCC--aAC-tTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCA------------- Trichoderma_virens ---------------------cT-cGGAGGGATCATTACCGAGTTTACAACTCCCAAACCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATC-tCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGG------cGCCCGCCGGAGGACCAAC--c-aAAACTCTTATT-------------gTATACCCCCTCGCGGG-----------TTTTTTACTATCTGAGCC-aTCTCGGCG-cCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTT-cAACAACGG-aTCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCC--gGGGGGTCGGCGTTGGGGATCGGCCCT---TTA-C--------gG--gGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-aCTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCCAAAC-tTCTGAAATGTTGACCTCGGATCAGGTAGGAATA-cCCGCTGAACTTAAGCATATCA------------- ; END; BEGIN CHARACTERS; TITLE TEF; DIMENSIONS NCHAR=644; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Trichoderma_aggressivum -cTCCACATTCAATTGTGCTCGATCATTCTGAA-gAGAAT-----tGTCG----aCAA-tTTTTC-------------aTCACCCCCGCT--------tTCCATTACCCCTCCTTT-gCAGCGACAC---aAATTTTTTT--tTGCTGT-cGTTTG-gTTTTAGTGGGGTTCCTTGT----------gC-a-cCCCCACTAGCTCACTGC----tTTTTTTTGTGCTTCACTATC----aCTAC-cCAGCCGTCGTTCAACGTGCTC------tGTCTC------------tCGT--cATCCAGTGATGCTAACCACTTTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTCCTTCA--tCACCCCGATGCAGCAATTACAAGCCAGTG--cTAACAGGCAATT--cACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCTATCCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_aureoviridis --tCGGGCCTCGATTGTGACGAGCAATTCTTCA-tCGAATTCCCTTGTCA----aCGA-gTTTCC-------------gTCA-cCCCGCTTTCACACTGCCCATTACCCCTCCTTT-gCTGCGGCGT---gCAATTTTTTTTTTGGCAG-cCTTCA-tTTTTAGTGGGACTGCACCA----------gC-t-gCTCCGCCACTGTTCAAC---aGCTTATTGCAACCTCATTGCCTCTTACCTC-gTCAATTCCATTCGA-aCGCTT------tTAATC------------aTCC--cTCTCAGTGATGCTAACCATCTTTCCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATTGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---tCTGCCTCATGACTCTTTGCTCGCCCTTTGCAAGCCTGTA--cTGATGCGAGTTTTGTACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCCGTTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Trichoderma_catoptron -cTTCACATTCAATTGTACCCGACAATTCTGAA-cAGAATTTTCATGTCAAATTATTT-tTTTTC-------------aTCA-cCCCGCT--------tTCCATTACCCCTCCTTT-gCAGCGACGC---aAATTTTTTT---tGCAGT-aTTTTG-aTTTTAGTGGGGTTGCCTCT----------gC-a--cCCCACTAACTTGCTAC------tTGTTTAC-cTTCACAATC----aCTGC-aCAGTCGGCATTCAACGGTCTCCATCCATGCCTT------------tTCA--tTTTCAACGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTTGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTGTGGAAGTTTGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTCATTCA--tCAACTCCATGCAGCAATTGCGAGCCAGCA--cTAACAGAAATTC--cACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGAACTTCTCAGGCCGATTGCGCTATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_chlorospora -TTCCCCTTCCAATTGTGACGGACAATTCTCAACCGGAATTGTCTTGTCA----aCAA-tTTTGC-------------aTCA-cCCCGCTTT--cACTTCCCATTACCCCTCCTTT-gCAGCGACGC---aAAATTTTTT----gCAGC-c-tCGA-aTTTTAGTGGGGTCGCTTGT----------gC-aTCCCCCACCAACCATTCAC----tGCTTTTTGCCCTCGACTGC-----gTGTG-cCTGTCATCATTCCACGCTCTT--------gATC------------aTCT--cTTTCAGCGATGCTAACCAT-cTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATTGACATTGCCCTTTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTTTACGGATCTCATCCCGTTCTTTGTTCGCCAGCCTGTA--cTAATGCCAGTTT--gACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCTATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_cinnamomea -aTTCGCATTCCATTATGCCCGACAATTCTGAA-aAGAATTTTCGTGTCA----aCAA-gTTTTG-------------gTCA-cCCCGCT--------tTCGATTACCCCTCGTTT-gCAGCGACGC---aAATTTTTTT----gCTGT-cTTTTG-gTTTTAGTGGGGTTTCCTGC----------gC-a--cCCCACTAGTCAACTGC------tTTTTTGTGCTTCACTTTC----aCTGC-cCAG---tCATTCGACGTG---------------------------------cTTTCACCGATGCTAACCAC-cTTTTCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCATGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTGTGGAAGTTTGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTGATGCA--tCAACCTGATGCGGCGATTGCAAGCCAGTG--cTAACAGATGCTT--cACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACCTCCCAGGCCGATTGCGCTATCCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_alni -cTTCACATCCAATTGTGCTCGATCATTCTGAA-gAGAATCTTCGTGTCG----aCAA-tTTTTC-------------aCCA-cCCCGCT--------tTGGGTTACCCCTCATTT-gCAGCGACGC----aAATTTTTT---tGCTGT-cGTTTG-gTTTTAGTGGGGTCCCTTGT----------gT-a--cCCCACTAGCTCACTGC-----tTTTTTTGTGCTTCACTCTC----aCTGC-tCAGCCATCATTCAGCGCGCTC--------tGTC------------tCTCATCATGCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGCGGTATCACCATCGACATTGCTCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTGCTACA--tCAACTTCATGCTGCGATTGCGAGCCAGTG--cTAACAGACAATT--cTCAGACGCCCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGACTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Trichoderma_harzianum_CBS_226.95 -cTCCACATTTAATTGTGCCCGATAATTCTGCA-gAGAATTTTCGTGTCG----aCAA-tTTTTC-------------aTCA-cCCCGAT--------tTGCATTACCCCTCCTTT-gCAGCGACGC---aAATTTTTTT---gGCTGT-cGTTTG-gTTTTAGTGGGGTTTCTCGT----------gC-a--cCCCACTAGGTCACTGC-----tTTTTTTCTGCTTCGCTCTT----aCTGC-cCAGCCATCATTCAACGTGCTC------tGCGTC------------tCATCACTTTCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Trichoderma_harzianum_dis_218e CCTCCAAATTCAATTGTGCCCGACGATTCTGAA-GAGAATTTTCGTGTCG----ACAA-TTTTTC-------------GTCA-CCCCGC--------TTTCCATTACCCCTCCTTT-GCAGCGACGC---AAATTTTTTT-?--GCTGT-CTTTTGG?TTTTAGTGGGGTTTCTTGT----------GC-A?-CCCCACTAGCTCACTGC--TTTTTTTTTTTGGCTTCACTCTC----ACTTC-CCCGCCAT---TCAACGTACTC------TGTGTC------------TTTGGTCATTCAGCGATGCTAACCAC?TTTTCCGTC-AATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Trichoderma_harzianum_dis_377a CCTCCACATTCAATTGTGCCCGACAATTCTGCA-GAGAATTTTGGTGTCG----ACAA?TTTTTC-------------ATCA-CCCCGC--------TTTGCATTACCCCTCCTTT?GCAGCGACGC?-AAAATTTTTTT?---GCTGT-CGTTTG-GTTTTAGTGGGGTTTCTTGT----------GC-A-CCCCCACTAGCTCACTGC----TTTTTTTCCTGCTTCGCTCTC----ACTTC-CCGGCCATCATTCAACGTGCTC------TGTGTC----------TCGTCA--CTTTCAGCGATGCTAACCGC?TTTTCTATC-AATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Trichoderma harzianum GJS 00-08' CCCTCCAATTCAATTGTGCCCGACGATTCTGAA-GAGAATTTTCGTGTCG----ACAA-TTTTTC-------------GTCA-CCCCGC--------TTTCCATTACCCCTCCTTT-GCAGCGACGC---AAATTTTTTT-?--GGTGT-CTTTTGG?TTTTAGTGGGGTTTCTTGT----------GC-A?-CCCCACTAGCTCACTGCTTTTTTTTTTTTTGGCTTCACTCTC----ACTTC-CCCGCCAT---TCAACGTACTC------TGTGT?------------TTTAGTCATTCAGCGATGCTAACCAC?TTTTCCATC-AATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Trichoderma harzianum GJS 00-18' CCACACCATTCAATTGTGCCCGACAATTCTGCA-GAGAATTTTCGTGTCG----ACAA-TTTTTC-------------ATCA-CCCCGC--------TTTCCATTACCCCTCCTTT-GCAACGACGC---AAATTTTTTTG?--GCTGT-CGTTTGG?TTTTAGTGGGGTTTCTTGT----------GC-A-CCCCCACTAGCTCACTTT----TTTTTCCCCTGCTTCACTCTC----ACTTC-CCAGCCATCATTCAACGTGTTC------TGTGTC------------GTCA??CTTTCAGCAATGCTAACCAC?TTTTCCATC-AATAGGAAGCCGCCGAACTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Trichoderma harzianum GJS 85-119' CTTTCATATTCAATCGTGCCCGACAATTCTTCA-GAGAATTTTCGTGTCG----ACAA-TTTTTC-------------ATCA-CCCCGC--------TTTCCATTACCCCTCCTTT-GCAGCGACGC---AAATTTTTTTT?--GCTGC-CGTTTGATTTTTAGTGGGGTTCTCTGT----------GCAA--CCCCACTAGCTCACTGC-----TGTTTTTGTGCTTCACTC------ACTTC-CCAGTCACCATTCAACGTGCTCCG----TGTCT--------------TTGGTCATTCAACGATGCTAACCAC?TTTTCCATC-AATAGGAAGCCGCCGAACTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Trichoderma harzianum GJS 90-254' -cTTCACATTCAATTGTGCCCGACAATTCTGCA-gAGAATTTTCGTGTCG----aCAA-tTTTTC-------------aTCA-cCCCGCT--------tTCCATTACCCCTCCTTT-gCAGCGACGC--aAAAATTTTTT---tGCTGT-cGTTTGGTTTTTAGTGGGGTTCTCTGT----------gCAA--cCCCACTAGCTCACTGC------tTTTTCCTGCTTCACTCTC----aCTTC-cTAGTCATCATTCAACACGCTT------tGTGGC------------tTTGGTCATTCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Trichoderma harzianum GJS 92-100' ?CTCCACATTCAATTGTGTCCGACAATTCTGCA-GAGAATTTTCGTGTCA----ACAA?TTTTTC-------------ATCA-CCCCGC--------TTTGCATTACCCCTCCTTT?GCAGCGACGC?-AAAAATTTTTT?---GCTGT-CGTTTG-GTTTTAGTGGGGTTTCTTGT----------GC-A--CCCCACTAGCTCG----------TTTTTTCTGCTTCGCTCTC----ACTTC-CCAGCCATCATTCAACGTATTC------TGTGTC----------TCGTCA--CTTTCAGCGATGCTAACCAC?TTTTCCATC-AATAGGAAGCCGCCGAACTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Hypocrea_brunneoviridis -CTTCACATTCAATTGCGTCCGACAATTCTGAA-gGGAATTTTCGTGTCG----aCAA-cTTTTC-------------aTCT-cCCCGCT--------tTCCGTTACCCCTCCTTT-gCAGCAACGC--aAAATTTTTTT---tGCTGTGCTTTTG-gTTTTAGTGGAGTTTCTTGT----------gC-a--cCCCACTAGCTCACTGC------tTTTTTGTGCTTGACTCTC----aCTTCGCCAGTCATCATTCAACGTGTTC------cGTGTC------------tTTGGTCATTCAGCGATGCTAACCAC-tTTTTCATC-aATAGGAAGCCGCTGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTCCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTGCTTCA--tCAACTTTATGCTACAATTGCAAGCCAGTG--cTAACAGGCAATT--cGCAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGACTGCGCTATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_epimyces ---------------gTGCTCGATCATTTCGAA-gAGAATTTTCGTGTCG----aTAA-tTCTTC-------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTT-gCAGCGACAC-----aATTTTTT---tGCTGT-cGTTGG-gTTTTAGTGGGGTTCCCTGT----------gC-a--cCCCACTAGCTCACTGC----cTTTTTTTGTGCTTCACTCTC----aCTGC-cCAGCCGTCGTTCAACGTGCTC--------tGTC------------tC--gTCATTCAGCGATGCTAACCACTTTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTATGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTCCTTCA--tCATCTTGATGCAGCAATCACGAGCCAGTG--cTAACAGGCAATT--cACAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCTATCCTCATCATTGCTGCCGGTACTGGTGAGTGAG Trichoderma_amazonicum_IB50 -cCCCACATGCAATTGTGCCCGACGATTC-gCA-gAGAATTTTCGTGTCG----aCAATTTTTTC-------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTTGGCAGCGACGC---aAATTTTTTT---gGCAGT-cGGTTG-gCTCTGGTGGGGTTTCCTGT----------gC-a--cCCCACTAGCCCACTGC--TTTTTTTTTTCTGCTTCACTCTCCCC-aCTGG-cCAGTCATCATTCAACGTGCTC------tATGTC------------tCGC--cATTCAGCAATGCTAACCAC-tTTTCCATCAAATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Trichoderma_amazonicum_LA90 -cTCCACATGCAATTGTGCCCGACGATTCTGCA-gAGAATTTTCGTGTCG----aCAATTTTTTC-------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTTGGCAGCGACGC---aAATTTTTTT---gGCAGT-cGGTTG-gCTCTGGTGGGGTTTCCTGT----------gC-a--cCCCACTAGCCCACTGC--TTTTTTTTTTCTGCTTCACTCTCCCC-aCTGG-cCAGTCATCATTCAACGTGCTC------tATGTC------------tCGC--cATTCAGCAATGCTAACCAC-tTTTCCATCAAATAGGAAGCCGCC-aACTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Hypocrea_parepimyces -cTCCACATTCAATTGTGCGCGATCATTCTGCA-gAGAATTTTCGTGTCG----aCAA-tGTTTC-------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTT-gCAGCGGCGCAAAAAAATTTTTT---tGCTGT-cGTTTG-gGTTGAGTGGGGTTCCCTGT----------gC-a--cCCCACTAGCTCACTGC-----tTTTTTTGTGCTTCACTCTC----aCTGC-cCAGCCGTCATTCAACGTGCTC--------tGTC------------tCTGGTCATTTGGCGATGCTAACCACCTTTTCCATC-aATAGGAAGCCGCCGAACTCGGTAAGGGCTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGATATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTCATTCA--tCACCTTGTTGCCGCAATTGTGAGCCGCTG--cTAACAGGCAATT--cGCAGACGCCCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGACTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Trichoderma_pleuroticola -cTCCACATTCAATTGTGCCCGACGATTCTGCA-gAGAATTTTCGTGTCG----aCAA-tTTTTC-------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTTGGCAGCAACGC---aAATTTTTTG--tAGCAGC-cTTTTG-gCTTTGGTGGGGTTTCGCGT----------gC-a--cCCCACTAGCTCACTGC------tTTTTTCTGCTTCACTCTCCC--aCTGC-cCAGTCATCATTCAACGTGCTC------tGTGTC------------tCAC--cATTCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTGCTCCA--tCATCTTGATGCAGGAATTGCGAGCTGGTG--cTAACAGGTAATT--cGCAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Trichoderma_pleurotum -cTCCACATTCAATTGTGCCCGACGATTCTGCA-gAGAATTTTCGTGTCG----aCAA-tTGAT--------------aTCA-cCCCGCT--------tTCCGTTACCCCTCCTTTGGCAGCGACGC---aAATTTTTTT--tGGCAGC-cGTTTG-gCTTTGGTGGGGTTTTGTGT----------gC-a--cCCCACTAGCTCGCTGC---tTTTTTTTTCTGCTTCACTCCCCCC-ACTGGCCCAGTCATGATTCAACGTGCTC------tGTGTC------------gC----cATTCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTCTGCTGCTCCA--tCACCTCCATGCAGGAATGGCGAGCTGGTG--cTAACAGGTCATG--cGCAGACGCTCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Hypocrea_straminella -aTTCGCATTCAATTGTGCCCGACAATTCTGAA-aAGAATTTTCGTGTCA----aCAA-cTTTTC-------------gTCA-cCCCGCT--------tTCCATTACCCCTCCTTT-gCAGCGACGC---aAATTTTTTT----gCTGT-cATTTG-gTTTTAGTGGGGTTTCCTGC----------gC-a--cCCCACTAGTCAACTGC------tTTTTTGTGCTTCACTTTC----aCTGC-cCAGTCATCATTCAACGTGCCC------tACGTC------------gTCA--cTTTCAGCGATGCTAACCAC-tTTTCCATC-aATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCATGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTGATTCA--tCAACTTGATGCAGCAATTGCAAGCCAGTG--cTAACAGATGTTT--cATAGACGCCCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG Trichoderma_virens -cTTCACATTCAATTGTGCTCGACAATTCTGTT-cAGAATCATCGAGGCA----aCAATTTTTTC-------------gTCA-cCCCGCTTTCG----tTCCATTACCCCTCCTTT-gCAGCGACGC---aAAATTTTTT----gCTGC-cTCTAGTTTTTTAGTGGGGGTGCACCA----------gCAA--cCCCACCACTACCTCGC----tGCTCTTTGCCCTCGTCTACC----aCTTC-cCAGTCCTCATTCAACGATCTG------tGTCTC------------gTTA--tTTGCAGCGATGCTAACCAC-cGTTCCCTC-aACAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGT---cTCG------tCCCATTCAGCCAGCTCCCGTAAACCAGTG--cTAACCAGGATCT--cACAGACGCCCCCGGCCACCGTGATTT-cATCAAGAACAT-gATCACTGGTACTTCCCAGGCCGATTGCGCCATTCTCATCATTGCCGCCGGTACTGGTGAGTGAG ; END; BEGIN TREES; Title 'Trees from "Combined-Fused_MP.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Trichoderma_aggressivum, 2 Hypocrea_aureoviridis, 3 Trichoderma_catoptron, 4 Hypocrea_chlorospora, 5 Hypocrea_cinnamomea, 6 Hypocrea_alni, 7 Trichoderma_harzianum_CBS_226.95, 8 Trichoderma_harzianum_dis_218e, 9 Trichoderma_harzianum_dis_377a, 10 'Trichoderma harzianum GJS 00-08', 11 'Trichoderma harzianum GJS 00-18', 12 'Trichoderma harzianum GJS 85-119', 13 'Trichoderma harzianum GJS 90-254', 14 'Trichoderma harzianum GJS 92-100', 15 Hypocrea_brunneoviridis, 16 Hypocrea_epimyces, 17 Trichoderma_amazonicum_IB50, 18 Trichoderma_amazonicum_LA90, 19 Hypocrea_parepimyces, 20 Trichoderma_pleuroticola, 21 Trichoderma_pleurotum, 22 Hypocrea_straminella, 23 Trichoderma_virens; TREE MP = (((((1:32.0,(((6:40.0,(16:33.0,19:39.0):10.0):17.0,((17:1.0,18:0.0):10.0,(20:20.0,21:20.0):5.0):30.0):9.0,((((((7:40.0,11:19.0):4.0,14:20.0):5.0,9:22.0):8.0,(8:12.0,10:14.0):11.0):8.0,(12:24.0,13:17.0):8.0):11.0,15:68.0):16.0):222.0):34.0,3:66.0):11.0,(5:50.0,22:28.0):27.0):41.0,23:62.0):23.0,(2:145.0,4:85.0):93.0):0.0; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = RPB2) = 'Jukes-Cantor': 1 - 876; ProbModelSet * UNTITLED (CHARACTERS = ITS) = 'Jukes-Cantor': 1 - 680; ProbModelSet * UNTITLED (CHARACTERS = TEF) = 'Jukes-Cantor': 1 - 644; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = RPB2) = universal: 1 - 876; CODESET * UNTITLED (CHARACTERS = ITS) = universal: 1 - 680; CODESET * UNTITLED (CHARACTERS = TEF) = universal: 1 - 644; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = RPB2) = unord: 1 - 876; TYPESET * UNTITLED (CHARACTERS = ITS) = unord: 1 - 680; TYPESET * UNTITLED (CHARACTERS = TEF) = unord: 1 - 644; END;