#NEXUS [written Wed Sep 20 12:10:01 SGT 2017 by Mesquite version 3.3 (build 854) at 179-161.priv23.nus.edu.sg/172.23.179.161] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=38; TAXLABELS 'Crucibulum laeve SWFC21261_DQ463357' 'Cyathus africanus DAOM200370_DQ463347' 'Cyathus africanus L38_JX103204' 'Cyathus africanus SWFC20782_DQ463340' 'Cyathus africanus var latisporus SWFC21187_DQ463342' Cyathus_albinus Cyathus_amazonicus Cyathus_amazonicus_AB7806 'Cyathus annulatus DAOM200366_DQ463351' 'Cyathus berkeleyanus SWFC20789_DQ463355' 'Cyathus colensoi DAOM200423_DQ463344' 'Cyathus crassimurus DAOM200372_DQ463350' 'Cyathus gansuensis SWFC20880_DQ463348' 'Cyathus hookeri L63_KC005989' 'Cyathus hookeri SWFC20799_DQ463346' 'Cyathus jiayuguanensis SWFC20846_DQ463341' Cyathus_limbatus_AMBr 'Cyathus olla 136_KC989088' 'Cyathus olla BPI727227_DQ463345' 'Cyathus olla f brodiensis SWFC21137_DQ463343' 'Cyathus pallidus SWFC21160_DQ463356' 'Cyathus renweii SWFC201406_DQ463352' 'Cyathus setosus DAOM200815_DQ463349' Cyathus_sp._BBH18348_EF613553 Cyathus_sp._BRFM934_JX082337 'Cyathus sp. Cabo_Verde_MPM3239' 'Cyathus sp. Cabo_Verde_MPM3246Inf' 'Cyathus stercoreus Xsd08083_FJ478125' 'Cyathus stercoreus Brazil_UFRN1200' 'Cyathus stercoreus RBG_Kew_K_M_44345_EU784192' 'Cyathus stercoreus RBG_Kew_K_M_48966_EU784193' 'Cyathus stercoreus SWFC21386_DQ463354' 'Cyathus striatus DSH96_028_DQ486697' 'Cyathus striatus RBG_Kew_K_M_122876_EU784194' 'Cyathus striatus RBG_Kew_K_M_126658_EU784195' Cyathus_subglobisporus_EF613553 'Cyathus triplex SWFC21077_DQ463353' 'Nidula niveotomentosa SWFC3000_DQ463358' ; END; BEGIN CHARACTERS; TITLE ITS_Cyathus; DIMENSIONS NCHAR=791; FORMAT DATATYPE = DNA GAP = - MISSING = N; MATRIX 'Crucibulum laeve SWFC21261_DQ463357' NNTTAAT-GAA----T-AAA-----CC-TGGTTT-----GCTGTTGCTGGCTCTTC-G--------GAGTAAT----GTGCA---------------------CGCTT----ATCATCTTTATATTTCCACCTGTGCACCTTTTGTAGACTTGGGA---TTATCTCTCGAG-------------GTAA-----CTCGGATGTG---GGTTT-GCAG------TT-GTGAAAACTCTGCTCTCCTTGT--ATTAT-CCA--GTCTATGTTAATTATATACACCAT-T-A-GTAT--GTTTAT-AGAATGTCGTTATTAGGATTTCAAAT-CCTTTTAATCAA--ATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTATCAACC-ACTTCTACT--TTTATT--AGTT-GA-AG-CTGGCTTGGATGTGGGGGTT---GCCGGCTTTTCTAATATAAAA-GGTCGGCTCTCCTTAAATGCATTAGCA-GAACCTTATGTGAATCAG----CTATTGGTGT-GATAATTATCTACGCC---A-------------------------TTGG-TTGTGAAGCAGCTATATAC-GGGGTTCAGCTTCTAACCGTC-TGAAA---GGACAATT-A-TA--TGACAATTTGACCTCAAATCAGGT 'Cyathus africanus DAOM200370_DQ463347' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCTTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-TC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTTTCATTTAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus africanus L38_JX103204' NNNNNNNNNNNNNNNNNNAAGTGGGCTTTCTTTTAGTTGGCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTTATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus africanus SWFC20782_DQ463340' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTTATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus africanus var latisporus SWFC21187_DQ463342' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTTATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT Cyathus_albinus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA-----CATAT----GTGCTCGCC---------------TCCATTTTTRTATTCACCTT-----TCCACCTGTGAACC-ATTGTAGATGTTGAAGG-TCAATTCTCAAGCTT----CA-TT----------GCTTGGTTTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTGTCGAACTT-CAAT-GTCTATTT--ACAT-ATAC-CC-T-TGATAAAA--GTTAAT--GAAGGTCTTGATT-GGGCTTC-AC-GCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGCGTTGGATGTGGGGGTT---GCGGGCTT-CATTTAGTTGAG--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGTGCC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GT--GGCTGACACTAGGGCTTGG-T-----CAAA--C-AAGCC-GGGGTTCTGCTTCTAATGGTCCATTCACTTGGACAAT--ACT--TTGACA-TTTGACCTCAAATCAGGT Cyathus_amazonicus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC---------------TCCATTTTTATATTCACCTT-----TCCACCTGTGAACC-ATTGTAGATGTTGAAGG-TCATTTCTCAAGCTT----CA-TT----------GCTTGGTTTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTGTCGAACTT-CAAT-GTCTATTT--ACAT-ATAC-CC-T-TGATAAAA--GTTAAT--GAAGGTCTTGATT-GGGCTTC-AC-GCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGCGTTGGATGTGGGGGTT---GCGGGCTT-CATTTAGTTGAG--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGTGCC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GT--GGCTGACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Cyathus_amazonicus_AB7806 NNNNNNNNNNNNNNNNNAGAGT-------------GGAGGTTGATGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC---------------TCCATTTTTATATTCACCTT-----TCCACCTGTGAACC-ATTGTAGATGTTGAAGG-TCATTTCTCAAGCTT----CA-TT----------GCTTGGTTTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTGTCGAACTT-CAAT-GTCTATTT--ACAT-ATAC-CC-T-TGATAAAA--GTTAAT--GAAGGTCTTGATT-GGGCTTC-AC-GCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTCCATTT-GTTTAT-CAAGT--GA-AGTGCGCGTTGGACGTGGGGGTT---GCGGGCTT-CATTTAGTTGAGAGGTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGTGCC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GT--GGCTGACACTAGGGCTTGG-T-----CAAA--C-AAGCC-GGGGTTCTGCTTCTAATGGTCCATTCACTTGGACAAT--ACT--TTGACA-TNNNNNNNNNNNNNNNNN 'Cyathus annulatus DAOM200366_DQ463351' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC--GCCATGA-GAGG-TTCATTTTT-TATTAACCCT---TTTCCACCTGTGAACT-ATTGTAGATGTTGGAGA-TCATTCCTCAGGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTTTCTCTG-CGATCGA-CAAT-GTCTATTT--ACAT-ATAC-CC-T-TGATTAAA--GTT-A-AAGAAGGACTTGATT-GGGCTTTCA-TGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTATCTTT-ATTGAT-----------AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGAACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCGGCA------CTTGGGTTTGG-CAA---C-AAGCC-GGGATTCTGCTTCTAATCGTCCATTCACTTGGACAAT--ACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus berkeleyanus SWFC20789_DQ463355' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTGGTGTTTCTCTTAACGGAGAGACAT-ATTGTGCTCATC-AACTG-AAGGGGGGTTCATTTTT-TATTATATTT-----TCCACCTGTGAACT-ATTGTAGATGTTGGAGA-TCACCTCTCAA-------GCAA------GTAATTGCTTGGTCTGGAGAGTTT-GCGGGCTTCATTAAGTTGAAGTCGGCTCTCTCTGTCGATCTT-CAAT-GTCTATTTT-ACAT-ATAC-TCA---AATAAAA--GTT-AT-AGAAGGAATTGATT-GGGCTTT-AATGCCTATAAATCAAATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTCATTTCATTT-GTTAATTCAAGT--GA-GATGCATGTTGGATGTGGGGGTT---GCGGGCATTCATTAAGTTGAA--GTCGGCTCTCCTGAAATATATTAGCTGGGACCTTTGTTGGACT-GCTTTCCATA--GTGTGATAATTATCTACGCTT--AGGAG--GCTTTGAAGACA-TA----TTGGTTTTT---AATTA---AACCAGAGGTTCTGCTTCTAATAGTCCATTGACTTGGACAATT-ATTA--TGACA-TTTGACCTCAAATCACGT 'Cyathus colensoi DAOM200423_DQ463344' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTCATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TT-GACCTCAAATCAGGT 'Cyathus crassimurus DAOM200372_DQ463350' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACGCTGATG-----GTAAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGGGTTCATTTTT-TATTAACCTT-CTTTTCCACCTGTGCACTC-TTGTAGATATTGAAGGGTCATCTCTCAGGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTTATTTGAAATCGGCTTTCTCTGTCGACCTTTCAGT-ATCTATTTT-ACAT-ATAC-CC-T-TGAAATAA--GTT-AT-AGAAGGACTTGATT-GGGCTCT-AATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTTT-GCGGGCTT-CATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGTGAATCTTTGTTGAACCCGCTT-CTATTAGGTGTGATAATTATCTACGCCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus gansuensis SWFC20880_DQ463348' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTGGTGTTTCTCT-AACCGGGAGACAT-ATTGTGCTCGCCT-GCT--GATGGGGGTTCATTTTT-TGTTAA-CTT-CTTTTCCACCTGTGCACT-ATTGTAGTTGTTGTTGA-TCGTCTCTCAAGC-----GCAA------------GCTTGGTCTG--GAGTTTTGCGGGTTTCATTAAGTTGAAGTCGGCTTTCTCTGTTGATCTT-CAGC-ATCTATTT--ACAT-ATAC-TC----GATATAA--GTT--T-AGAAGGTCTTGAT-AGGGCTTT-A-TGCCTATAAATCAATTATACAACTTTTAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTCATTTCATTT-GTTTAT-CAAGT--GA-AATGCATGTTGGATGTGGGGGTT---GCGGGCTTTCATTCAATTGAA--GTCGGCTCTCCTGAAATGCATTAGCTGGAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTGAAAAAGACA-------TTTCATA----CACTTGT-GTAT--GGGGTTCTGCTCCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus hookeri L63_KC005989' NNNNNNNNNNNNNNNNNAAAGTGGGCTTTCTTTTAGTTGGCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTTATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus hookeri SWFC20799_DQ463346' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCMGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTTTCATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTT-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus jiayuguanensis SWFC20846_DQ463341' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCGGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTTATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT Cyathus_limbatus_AMBr NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATG-----GTAAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGG-TTCATTTTT-TATTATTCTT-CTTTTCCACCTGTGCACTC-TTGTAGATATTGGAGG-TCATCTCTCAGGC----AGCAAT-----------GCTTGGTGTC--GAGTTT-GCTGGCTTCATTTATTTGAAGTCGGCTTTCTCTGTCGACCTT-CAGT-ATCTATTTT-ACAT-ATAC-CC-T-TGAAATAA--GTT-AT-AGAAGGACTTGATT-GGGCTCT-AATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTTTTGCGGGCTTTCATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGTGAATCTTTGTTGAATC-GCTT-CTATTAGGTGTGATAATTATCTACGCCTTTGAAAA--GGG-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACCAAAGGTTCTGCTTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus olla 136_KC989088' CATTA-TTGAATTAATAAAAGTGGGCTTTCTTTTAGTTGGCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCAGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGTGTGTTGGATGTGGGGGTT---GCGGGCTTTCATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTT-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus olla BPI727227_DQ463345' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCAGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGTGTGTTGGATGTGGGGGTT---GCGGGCTTTCATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTT-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TTTGACCTCAAATCAGGT 'Cyathus olla f brodiensis SWFC21137_DQ463343' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATGTTTCCGTCAAACGAAACATATCTTTGTGCTCGCC--GACG-GA-GGGG-TTCATTTTT-TATTA-CCTT-CTTTTCCACCTGTGAACT-TTTGTAGATGTTGAAGA-TCGCCTCTCAA-------GCAATTCGTAAGAATTGATTGGTTTG--GAGTTT-GCGGGCGTCATTAAGTTGATGTCAGCTTTCTCTGTTGGTCTT-CA-C-GTCTATTTT-ACAT-ATAC-CC-T-T-ATTTCA--GTT--T-AGAAGGACATGATT-GGGCTTTTA-TGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCATTTCATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTT--GCGGGCTTTCATTCAGTTGAAA-GTCGGCTCTCCTGAAATGCATTAGCGGAAACCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GCGCGAA-AGCA------CTTGGGTT----CAATTTC-GAACC-GGGGTTTTGCTTCTAATCGTCCATTCACTTGGACAATTTACT--TTGACA-TT-GACCTCAAATCAGGT 'Cyathus pallidus SWFC21160_DQ463356' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTGGTGTTTCTACTC-----GAGACAC-A-TGTGCTCGCC-AGCTG--ATGGGGGTTCATTTTT-TATTA-CTTT---TTTCCACCTGTGCACT-ATTGTAGATGTTGGAGA-TCGTATCTCAA-------GC--------GTAA--GCTTGGTCTG--GAGTTT-GCGGGCTTCATTAAGTTGAAGTCGGCATTCTCTGTTGATCTT-CA-C-GTCTATTTTTACAT-ATAC-TC-T-TAATAA----GTT--T-AGAAGGACTTGATT-GGGCTTTTAATGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTCATTTCATTT-GTTTAT-CAAGT--GA-AATGCATGTTGGATGTGGGGGTTT--GCGGGCATTCATTAAGTTGAA--GTCGGCTCTCCTGAAATACATTAGCGGGAACTTATGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTGTGA--GACAGTAA--CATACTTTA------TTGT-GTAT---GGGTTCTGCTTCTAATCGTCCATTCACTTGGACAATT-ACT-CTTGACA-TTTGACCTCAAATCAGGT 'Cyathus renweii SWFC201406_DQ463352' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGG-TTCATTTTT-TATTAACCTT----TTCCACCTGTGAACT-ATTGTAGATGTTGGAGA-TCATTCCTCAA-------GCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTTTCTCTG-CGATCGA-CAAT-ATCTATTT--ACATTATAC-CC-T-TGATTAAA--GT--A-AAGAAGGACTTGATT-GGGCTTTTAATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTATCTTT-ATTGAT-----------AGTGCGCGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAATACATTAGCGGGAATCTTTGTTGAACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GCTCAGCA------CTTGGGTTTGG-CAA---C-AAACC-GGGATTCTGCTTCTAATCGTCCCTT-----GGACAATT-ACT--TTGACA-TT-GACCTCAAATCAGGT 'Cyathus setosus DAOM200815_DQ463349' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGATG-----GTAAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGG-TTCATTTTT-TATTATTCTT-CTTTTCCACCTGTGCACTC-TTGTAGATATTGGAGG-TCATCTCTCAGGC----AGCAAT-----------GCTTGGTGTC--GAGTTT-GCTGGCTTCATTTATTTGAAGTCGGCTTTCTCTGTCGACCTT-CAGT-ATCTATTTT-ACAT-ATAC-CC-T-TGAAATAA--GTT-AT-AGAAGGACTTGATT-GGGCTCT-AATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTTTTGCGGGCTTTCATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGTGAATCTTTGTTGAATC-GCTT-CTATTAGGTGTGATAATTATCTACGCCTTTGAAAA--GGG-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACCAAAGGTTCTGCTTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Cyathus_sp._BBH18348_EF613553 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTGATG-----GTAAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGG-TTCATTTTT-TATTAACCTT-C-TTTCCACCTGTGCACT-TTTGTAGATGTTGAAGA-TGATCTCTCAAGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTAAATTGAAGTCGGCCTTCTCTGTTGATCTT-CAATTGTCTATTTT-ACAT-ATAC-CC-T-TGAATGAA--GTT-AT-AGAAGGTGTTGATTCGGGCTTT-AATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTTATTT-GTTTAT-CAAGT---AGAGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAAAGCATTAGCGGGAATCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACC-GGGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Cyathus_sp._BRFM934_JX082337 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC---------------TCCATTTTTATATTCACCTT-----TCCACCTGTGAACC-ATTGTAGATGTTGAAGG-TCAATTCTCAA-------GC--TTC------ATTGCTTGGTTTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTGTCGAACTT-CAAT-GTCTATTT--ACAT-ATAC-CC-T-TGATAAAA--GTTAAT--GAAGGTCTTGATT-GGGCTTC-AC-GCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGCGTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus sp. Cabo_Verde_MPM3239' CATTA-TTGAATT---AATAGTTGG----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----TATTATTACC---TTTCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTT----CA-T----------TGCTTGGTTTG--GCGTTT-GCGGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus sp. Cabo_Verde_MPM3246Inf' CATTA-TTGAATT---AATAGTTGG----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----TATTATTACC---TTTCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTT----CA-T----------TGCTTGGTCTG--GCGTTT-GCCGGCTTCCTTCAGTTGAAGTCCGCTCTCCCTG-CCAACTT-CAAT-GGCTATCTCTACCT-ATAC-CCAT-T-AAAA----GT-ATC-AGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCCCATCCATGAAGAACGCAGCGAATTGCCATAAGTAATGTGAATTGCAGAATTCAATGAATCATCCAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCCAAGAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus stercoreus Xsd08083_FJ478125' CATTA-TTGAATT--TAATAGTGG-----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----TATTAACATT-----TCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTTTCAGCAAT-----G-ATATGCTTGGTCTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTG-CGAACTT-CAAC-ATCTATCCTTACAT-ATAC-CCAT-TAACAAAAA-GT-AACAAGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTTTGTTTATTCAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCCCTGAAATGCATTAGCAGGAATCTTTGTTGTGCT-GCTT-CTATTGGGTGTGATAATTATCTACGCTT--AGGAA--GT--GGCTGACACTAGGACTTGG-T-----CAAA--C-AAGTC-GGGGTTCCGCTTCTAATAGTCCATTCACTTGGACAAT--ACTACTTGACA-TTTGACCTCAAATCAGGT 'Cyathus stercoreus Brazil_UFRN1200' CATTA-TTGAATT---AATAGTGG-----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----TATTAACATT-----TCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTTTCAGCAAT-----G-ATATGCTTGGTCTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTG-CGAACTT-CAAC-ATCTATCCTTACAT-ATAC-CCAT-TAACAAAAA-GT-AACAAGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTTTGTTTATTCAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCCCTGAAATGCATTAGCAGGAATCTTTGTTGTGCT-GCTT-CTATTGGGTGTGATAATTATCTACGCTT--AGGAA--GT--GGCTGACACTAGGACTTGG-T-----CAAA--C-AAGTC-GGGGTTCCGCTTCTAATAGTCCATTCACTTGGACAAT--ACTACTTGACA-TTTGACCTCAAATCANNN 'Cyathus stercoreus RBG_Kew_K_M_44345_EU784192' CATTA-TTGAATT---AATAGTGG-----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----CATTAACATT-----TCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTTTCAGCAAT-----G-ATATGCTTGGTCTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTG-CGAACTT-CAAC-ATCTATCCTTACAT-ATAC-CCAT-TAACAAAAAAGT-AACAAGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTTTGTTTATTCAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCCCTGAAATGCATTAGCAGGAATCTTTGTTGTGCT-GCTT-CTATTGGGTGTGATAATTATCTACGCTT--AGGAA--GT--GGCTGACACTAGGACTTGG-T-----CAAA--C-AAGTC-GGGGTTCCGCTTCTAATAGTCCATTCACTTGGACAAT--ACTACTTGACA-TTTGACCCCAAATCAGGT 'Cyathus stercoreus RBG_Kew_K_M_48966_EU784193' CATTA-TTGAATT---AATAGTGG-----------TAGTGCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----TATTAACATT-----TCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTTTCAGCAAT-----G-ATATGCTTGGTCTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTG-CGAACTT-CAAC-ATCTATCCTTACAT-ATAC-CCAT-TAACAAAAA-GT-AACAAGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTTTGTTTATTCAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCCCTGAAATGCATTAGCAGGAATCTTTGTTGTGCT-GCTT-CTATTGGGTGTGATAATTATCTACGCTT--AGGAA--GT--GGCTGACACTAGGACTTGG-T-----CAAA--C-AAGTC-GGGGTTCCGCTTCTAATAGTCCATTCACTTGGACAAT--ACTACTTGACA-TTTGACCTCAAATCAGGT 'Cyathus stercoreus SWFC21386_DQ463354' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGGTG-----GTCAAA-----CACAT----GTGCTCGCTCTGC-------------CACT----YATTAACATT-----TCCACCTGTGAACT-ATTGTAGATGTTGAAGG-TCACCTCTCAAGCTTTCAGCAAT-----G-ATATGCTTGGTCTG--GCGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCGCTG-CGAACTT-CAAC-ATCTATCCTTACAT-ATAC-CCAT-TAACAAAAA-GT-AACAAGAAGGACTTGATT-GGGCTTC-ATTGCCTATAAATCAATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTTTGTTTATTCAAGT--GA-AGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCCCTGAAATGCATTAGCAGGAATCTTTGTTGTGCT-GCTT-CTATTGGGTGTGATAATTATCTACGCTT--AGGAA--GT--GGCTGACACTAGGACTTGG-T-----CAAA--C-AAGTC-GGGGTTCCGCTTCTAATAGTCCATTCACTTGGACAAT--ACTACTTGACA-TTTGACCTCAAATCAGGT 'Cyathus striatus DSH96_028_DQ486697' NNNNNNTTGAATTAATAAAAGTGGGCTTTGAATT-GGAGGCTGATGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC--GCCATGA-AGAG-TTCGCTTTT-TATTAACCTT-----TCCACCTGTGCACT-TYTGTAGATGTTGGAGG-TCATCCTTCAAGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCTCTGTCGATCTT-CAAT-GTCTATTTT-ACAT-ATAC-CC-T-TGATAAAA--GTT-A-AAGAAGGACATGATT-GGGCTTT-A-TGCCTATAAATCTATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTT-GTTTAT-CAAGT---AAAGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACC-GGGGTTCTGCTTCTAATGGTCCATTTACTTGGACAAT--ACTCTTTGACA-TNNNNNNNNNNNNNNNNN 'Cyathus striatus RBG_Kew_K_M_122876_EU784194' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGTCGGCTCTCTCTGTCGATCTT-CAAT-GTCTATTTT-ACAT-ATAC-CC-T-TGATAAAA--GTT-A-AAGAAGGACATGATT-GGGCTTT-A-TGCCTATAAATCTATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTT-GTTTAT-CAAGT---AAAGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACC-GGGGTTCTGCTTCTAATGGTCCATTTACTTGGACAAT--ACTC-TTGACA-TT-GACCTCAA-TCNNNN 'Cyathus striatus RBG_Kew_K_M_126658_EU784195' CATTAATTGAATTAATAAAAGTGGGCTTTGAATT-GGAGGCTGATGCTGATG-----GTCAAA-----CATAT----GTGCTCGCC--GTCATGA-AGAG-TTCGCTTTT-TATTAACCTT-----TCCACCTGTGCACT-TTTGTAGATGTTGAAGG-TCATCCTTCAAGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTCAGTTGAAGTCGGCTCTCTCTGTCGATCTT-CAAT-GTCTATTTT-ACAT-ATAC-CC-T-TGATAAAA--GTT-A-AAGAAGGACATGATT-GGGCTTT-A-TGCCTATAAATCTATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTCATTT-GTTTAT-CAAGT---AAAGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAATGCATTAGCGGGAATCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCAGCA------CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Cyathus_subglobisporus_EF613553 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTGATG-----GTAAAA-----CATAT----GTGCTCGCC--GCCATGA-GGGG-TTCATTTTT-TATTAACCTT-C-TTTCCACCTGTGCACT--TTGTAGATGTTGAAGA-TGATCTCTCAAGC----AGCAAT-----------GCTTGGTTTG--GAGTTT-GCGGGCTTCATTAAATTGAAGTCGGCCTTCTCTGTTGATCTT-CAATTGTCTATTTT-ACAT-ATAC-CC-T-TGAATGAA--GTT-AT-AGAAGGTGTTGATTCGGGCTTT-AATGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTTTATTT-GTTTAT-CAAGT---AGAGTGCGTGTTGGATGTGGGGGTT---GCGGGCTT-CATTCAGTTGAA--GTCGGCTCCTCTGAAAAGCATTAGCGGGAATCTTTGTTGGACC-GCTT-CTATTGGGTGTGATAATTATCTACGCCT--AGGAA--GTA-GTTCAGCA------CTTGGGTTTGG-CAA---C-AAACC-GGGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Cyathus triplex SWFC21077_DQ463353' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTATAAATCAATAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTTGGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCACTACATTT-GTTTAT-CAAGT--GA-AGTGCGTGTTGGATGTGGGGGTTTT-GCGGGCTT-CATTCAGTTGAA--GTCGGCTCTCCTGAAATGCATTAGCGTGAATCTTTGTTGAACCCGCTT-CTATTAGGTGTGATAATTATCTACGCCTTTGAAAAAAGGGGGTTCAGCA------CTTGAGTTTGG-CAA---C-AAACTGAAGGTTCTGCTTCTAATGGTCCATTCATTTGGACAAT--ACT--TTGACA-TTTGNNNNNNNNNNNNNN 'Nidula niveotomentosa SWFC3000_DQ463358' NNNNNNNNNNNNNNNNNNNNGCGATGATCATATGATGACTGTCGCGCTGATG---CTGCTC---TCGGCAT------GTGCTCGTG-----------------CAC------ATCATGATC--TCTCACA-TTGTGCAC--ATTGTAGACT--GGATA--CATC----GAGCC-GAGCCAAATCTCGGTTTGGCCTCGGTTTG-AGGATT--GCTG------T---GTTAACGCCAGTCTTTCCT-TACATT-T-CCAA-GTCTATGTTTACAT---AC-CCATATAATGAAAAACC---T-AGAATGTCTA-TGT-GGGCCTTT-GTGCCTATAAA-GAAAAATACAACT-CCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCT-CAAAAGCT--TTCATTA--GCTCGAGAG----GCTTGGATGTGGGGGTT---GCAGGCCTTTT----GTTA---GGTCTGCTCCTCTTAAATGCATTAGCGTGAACCTTTGTGGAACA-G----CTATTGG-TGTGATAATTATCTACGCCT----------------------------TTGGTTTGTGAAGCAGT----------GTTCGAGCTTCTAACGGTCCTTAAGCT-GGACAATTTA-----TGACAATT-GACCTCAAATCAGGT ; END; BEGIN TREES; Title ITS_Cyathus; ID 015e9d74a5059; LINK Taxa = Taxa; TRANSLATE [0] n0 'Crucibulum laeve SWFC21261_DQ463357', [1] n1 'Cyathus africanus DAOM200370_DQ463347', [2] n2 'Cyathus africanus L38_JX103204', [3] n3 'Cyathus africanus SWFC20782_DQ463340', [4] n4 'Cyathus africanus var latisporus SWFC21187_DQ463342', [5] n5 Cyathus_albinus, [6] n6 Cyathus_amazonicus, [7] n7 Cyathus_amazonicus_AB7806, [8] n8 'Cyathus annulatus DAOM200366_DQ463351', [9] n9 'Cyathus berkeleyanus SWFC20789_DQ463355', [10] n10 'Cyathus colensoi DAOM200423_DQ463344', [11] n11 'Cyathus crassimurus DAOM200372_DQ463350', [12] n12 'Cyathus gansuensis SWFC20880_DQ463348', [13] n13 'Cyathus hookeri L63_KC005989', [14] n14 'Cyathus hookeri SWFC20799_DQ463346', [15] n15 'Cyathus jiayuguanensis SWFC20846_DQ463341', [16] n16 Cyathus_limbatus_AMBr, [17] n17 'Cyathus olla 136_KC989088', [18] n18 'Cyathus olla BPI727227_DQ463345', [19] n19 'Cyathus olla f brodiensis SWFC21137_DQ463343', [20] n20 'Cyathus pallidus SWFC21160_DQ463356', [21] n21 'Cyathus renweii SWFC201406_DQ463352', [22] n22 'Cyathus setosus DAOM200815_DQ463349', [23] n23 Cyathus_sp._BBH18348_EF613553, [24] n24 Cyathus_sp._BRFM934_JX082337, [25] n25 'Cyathus sp. Cabo_Verde_MPM3239', [26] n26 'Cyathus sp. Cabo_Verde_MPM3246Inf', [27] n27 'Cyathus stercoreus Xsd08083_FJ478125', [28] n28 'Cyathus stercoreus Brazil_UFRN1200', [29] n29 'Cyathus stercoreus RBG_Kew_K_M_44345_EU784192', [30] n30 'Cyathus stercoreus RBG_Kew_K_M_48966_EU784193', [31] n31 'Cyathus stercoreus SWFC21386_DQ463354', [32] n32 'Cyathus striatus DSH96_028_DQ486697', [33] n33 'Cyathus striatus RBG_Kew_K_M_122876_EU784194', [34] n34 'Cyathus striatus RBG_Kew_K_M_126658_EU784195', [35] n35 Cyathus_subglobisporus_EF613553, [36] n36 'Cyathus triplex SWFC21077_DQ463353', [37] n37 'Nidula niveotomentosa SWFC3000_DQ463358'; TREE con_50_majrule = ((n37:0.2562812,n0:0.224008):0.10794025,((n21:0.0111889,n8:0.01273436):0.02977481,(n34:0.003282664,n33:0.001896652,n32:0.002335331):0.02207439,(n36:0.01112102,n11:0.004456341,(n22:0.001332179,n16:0.00133399):0.01407993):0.05119021,((n6:0.001581193,n7:0.005158733,(n24:0.002095171,n5:0.001404867):0.003201027):0.01994233,((n25:0.008068165,n26:0.01946623):0.06387509,(n31:0.001270421,n27:0.001198995,n30:0.001213034,n28:0.001206842,n29:0.004459181):0.007517495):0.06025722):0.03510404,((n23:0.001411791,n35:0.001388742):0.02809251,((n12:0.04400408,(n20:0.02765063,n9:0.08390914):0.01336277):0.05473932,(n1:0.006534101,n10:0.001252991,(n19:0.001298037,(n14:0.001282432,(n18:0.001259065,n17:0.001187481):0.002772376):0.002795335):0.002721763,(n4:0.001215266,n15:0.001251907,n3:0.001227417,n13:0.001128008,n2:0.001170043):0.002764775):0.03837217):0.03087319):0.007217997):0.10794025); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 791; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 791; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 791; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1505880601626; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4431574329187810893; tell It; setDefaultOrder 1 5 15 12 10 35 36 37 26 3 8 28 4 14 6 11 34 13 7 9 2 25 29 24 16 22 23 18 20 21 19 17 32 31 30 33 27 0; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2568375026396032171; mqVersion 330; checksumv 0 3 2560192399 null getNumChars 791 numChars 791 getNumTaxa 38 numTaxa 38 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 618354.0 sumSquares -1.8446744073709492E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 153; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1130 662; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2568375026396032171 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -72; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;