NEXUS
[File created by TreeBASE:  7/26/07  20:59:50]
[Matrix accession#: M1065]

BEGIN TAXA;
	TITLE M1065;
	DIMENSIONS  NTAX=59;
	TAXLABELS
		Stogonospora_foliicola	Phaeosphaeria_volkartiana	Phaeosphaeria_vagans	Phaeosphaeria_triglochinicola	Phaeosphaeria_spartinae_b	Phaeosphaeria_spartinae_a	Phaeosphaeria_sp._fm._Phlox	Phaeosphaeria_sp._fm._Iolium	Phaeosphaeria_silvatica	'Phaeosphaeria silenes-acaulis'	Phaeosphaeria_setosa	Phaeosphaeria_pontiformis	Phaeosphaeria_pleurospora	Phaeosphaeria_phragmitis	Phaeosphaeria_phragmiticola	Phaeosphaeria_padellana	Phaeosphaeria_oryzae	Phaeosphaeria_oreochloae	Phaeosphaeria_nodorum	Phaeosphaeria_nigrans	Phaeosphaeria_microscopica	Phaeosphaeria_lycopodina	Phaeosphaeria_luctuosa	Phaeosphaeria_lindii	Phaeosphaeria_juncophila	Phaeosphaeria_juncina	Phaeosphaeria_juncicola	Phaeosphaeria_insignis	Phaeosphaeria_herpotrichoides_b	Phaeosphaeria_herpotrichoides_a	Phaeosphaeria_halima	Phaeosphaeria_fuckelii	Phaeosphaeria_eustoma_b	Phaeosphaeria_eustoma_a	Phaeosphaeria_dennisiana	Phaeosphaeria_culmorum	Phaeosphaeria_caricis	Phaeosphaeria_caricinella	Phaeosphaeria_caricicola	Phaeosphaeria_berlesei	Phaeosphaeria_bellynckii	Phaeosphaeria_avenaria	Phaeosphaeria_alpina	Phaeoseptoria_sp.	Phaeoseptoria_musae	Paraphaeosphaeria_michotii	Leptosphaeria_weimeri	Leptosphaeria_typharum	Leptosphaeria_taiwanensis_c	Leptosphaeria_taiwanensis_b	Leptosphaeria_taiwanensis_a	Leptosphaeria_sp._fm._Miscanthus	Leptosphaeria_sp._fm._Bouganvillea	Leptosphaeria_maculans	Leptosphaeria_dryadis	Leptosphaeria_doliolum	Leptosphaeria_congesta	Leptosphaeria_conferta	Leptosphaeria_bicolor
	;
END;

BEGIN CHARACTERS;
	TITLE M1065;
	DIMENSIONS NCHAR=502;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Stogonospora_foliicola                   CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGCACC-CATG-T--TTCCTC-GGCAGGC-TTGCCTGTCGACTGGACAAAATT-ATAACC-TTTTT-AATGTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTT----GT-GTTTGGACTCGCCTTAAAACAATTGGCAGCCA-GTGTTTTGGTATA-GAA-GCGCAGCACAAGTCGCGATTCTGGC--CTCATAGCAC-TT-GCAT-CCAC-AAG--T-TTTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_volkartiana                CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CTTG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CT-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_vagans                     CATTACA-TTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_triglochinicola            CATTAAATATCGGTAGTTTACTACC--TTGACTTTTTGCGCACT-CATG-T--TTCCTT-GGTGGGC-TTGCCCGCCAAAAGGATAATTTA-ATAACC-TCTTT-AATTTTCAAT-CAGCGTCTG--AATTATTTTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACTCTCAAGCCTTGCTTGGTGTTGGGTGTTTGTC-TCTGCTCT----GC---TTAGACTCGCCTTAAATATATTGGCAGCCG-GTATACTGGTTT--GAA-GCGCAGCAC-ATTTGCAATTCAAGC--CTGCTATTAT-TG-GTAC-CCACAAAGAAT--ATCAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_spartinae_b                CATTAAATTTCTTTGGCGTGCCACT--TTGTCT-TTTGTGCACT---TG-T--TTCCTC-GGCGGGT-CTGCCCGTCTTTAGGACCAAACT-ATAACCCTTTTT--ATTTTTAAT-CTGCGTCTGAAAACAATA-TAAT-CATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTATA-GAA-GCGCAGCACATTTTGCGATTCTGGC--TG-ATAATAC-TT-GCTT-CCAT-AAGCCT-TTTTATTAACGCTTGACCTCGGATCAGG
		Phaeosphaeria_spartinae_a                CATTAAATTTCTTTGGCGTGCCACT--TTGTCT-TTTGTGCACT---TG-T--TTCCTC-GGCGGGT-CTGCCCGTCTTTAGGACCAAACT-ATAACCCTTTTT--ATTTTTAAT-CTGCGTCTGAAAACAATA-TAAT-CATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTATA-GAA-GCGCAGCACATTTTGCGATTCTGGC--TG-ATAATAC-TT-GCGT-CCAT-AAGCCT-TTTTATTAACGCTTGACCTCGGATCAGG
		Phaeosphaeria_sp._fm._Phlox              CATTATGAATAAGTAGTTTGCTACTT-TTGTCT-TTTGAGTACT-TATG-T--TTCCTT-GGTAGGC-TTGCTTACCAATTGGACAATTTA-CAAACCTTTATT---TCTTAAAT-CAGCGTCTG--AATAAAT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTATGCTTGGTGTTGGGTGTTTGTCCTTTGTTTT----ATAGCTTGGACTCGCCTCAAAGTAATTGGCAGCCAAATGTTTTGGTAG--AAA-GCGCAGCACATTTTGCAATTTCCT---CCAAGAGTAT-TA-GCG-ACCAATAAGCCT-TTCTAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_sp._fm._Iolium             CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAACTTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGCATCAGG
		Phaeosphaeria_silvatica                  CATTACAATTCAGTAGCTTGCTACT--TTGTCT-ATTGCGCACT-CCTG-T--TTCCTC-GGTGGGC-TTGCCCGCCGATTGGACAAAACT-ATACTC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCT-T----GC-GTTTGGACTCGCCTTAAAGTAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-GTAATAC-TC-GCGT-CCAT-AAGTCT--TTTTT-AACTTTTGACCTCGGATCAGG
		'Phaeosphaeria silenes-acaulis'          acaT??SCATTACATATCGGTAGTTTACTACC--TTGACTTTTTGCGCACacaT??ST--TTCCTT-GGCGGGC-TTGCCCGCCAACAGGATCATTCA-AacaT??SCTTT-AATTTTCAAT-CAGCGTCTG--AATTATTTTAAT-AATacaT??STTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCacaT??STGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAacaT??SAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCAacaT??STCGAGCGTCATTTGTACTCTCAAGCCTTGCTTGGTGTTGGGTGacaT??STCTGCTCT----GC---TTAGACTCGCCTTAAATAGATTGGCAacaT??SATACTGGTTT--GAA-GCGCAGCAC-ATTTGCAATTCAAGC--acaT??STAT-TG-GTAT-CCACAAAGAAT--ATCAA-CACTTTTGACCTac
		Phaeosphaeria_setosa                     CATTATCAATT-AT-AGGCG------TTTGTC-TTTTGCGTACTGTATG-T--TTCCTC-GGTGGGC-TCGCCCGCCGATAGGAC-ACTTT-AAAACC--TTTTGTAATGGAAAT-CAGCGTCAGAAATAAC-TATAAT-AGTTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTG-TCTCGCCG-T-TGCGCG---CAGACTCGCCTTAAAGCAATTGGCAGCCGGCAAAA---GCCT-GGGA-GCGCAGCACA---TGCGTTGCTT-TCAGACTGCTTGT-CGAGCGT-CCAGCAAGCCTATTATTCTTGCGTTTGACCTCGGATCAGG
		Phaeosphaeria_pontiformis                CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-CATG-T--TTCCTC-GGCAGGC-TTGCCTGCCGATTGGAC-AATCT-ATAACC-TTTTT-AATTTTTAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GT-GTTTGGACTCGCCTTAAAACAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACAATTTGCGATTCTGGC--CTTAAAACAC-TA-GTGT-CCAT-AAG-TA-TTTTCT-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_pleurospora                CATTACTTT-CAGTAGTTTACTACT--TTGTCTTTTTGCGCACT-CATG-T--TTCCTC-GGTAGGC-TTGCCTGCCGGTCGGAC-ATTTA-ATAACC-TTTTT-AATCTTCAAT-CAGCGTCTG--AACAATTATAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACTCTCAAGCTATGCTTGGTGTTGGGTGTTTGTC-TGTGCTTT----AT-GCTTAGACTCGCCTTAAATATATTGGCAGCCG-ATATATTGGTTT--GAA-GCGCAGCACAATTTGCGAATCTTGC--CT-TTAATAT-TA-GCCC-CCATAAAGTAT-AATTAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_phragmitis                 CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGGTTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTGAAAAAAA-T-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTATC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_phragmiticola              CATTACAATTCAGTAGCTTGCTACT--TTGTCT-ATTGCGCACC-CATGTT--TTCCTC-GGCGGGC-TTGCCCGCCGGTTGGACAAACCT-ATAACC-TTTTT-CATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAGTGCAGTGTGAATTCAGCAGATATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCAG-TGTTTTGGTATT-GAA-GCGCAGCACAATTTGCGATTCTAGC--CG-ACAGCAC-TT-GCGT-CCAT-AAGCC---TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_padellana                  CATTAA-TTTCGGTGGTTTTCCACT--TTGTCT-TTTGAGTACC-CAAG-T--TTCTTT-GGTAGGC-TTGCCTGCCA-TT-GAC-AACCT-ATAACC-TTTTT-AATTTTAAAT-CAGCGTCTG--AAAAATT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTATTCTTT----GC-AATAAGACTCGCCTTAAAACAATTGGCAGCCA-GTGTTTTGGCATT-GAA-GCGCAGCACATTTTGCAATTCAAGCCCA----AATAC-TT-GCGT-CCAT-AAGCGT-ATTTTA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_oryzae                     CATTAC-ATTCAGT-------------TTGTTTTTTTGCGTACC-TATCGT--TTCCTC-GGCGGGC-TTGCCTGCCGGTTGGACAACTTT-ATAACCTTTTTA-AATCTTCAAT-CAGCGTCTG-AACAATATACAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGCTTGTCTT------T----TT-GTTAAGACTCACCTCAAAGTCATTGGCAGCCA-GTGTTTTGGTAGT--AA-GCGCAGCACATTTTGCG--TCTTGGTCCCT-CAACAG-CG-GCAT-CCATCAAGCCA-TTTTCT-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_oreochloae                 CATTAA-TTTCGGTGGTTTTCCTCT--TTGTCT-TTTGAGTACC-CAAG-T--TTCTTT-GGTAGGC-TTGCCTGCCA-TT-GAC-AACCT-ATAACC-TTTTT-AATTTTAAAT-CAGCGTCTG--AAAACTT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTATTCTTT----GT-AATAAGACTCGCCTTAAAACAATTGGCAGCCA-GTGTTTTGGCATT-GAA-GCGCAGCACATTTTGCAATTCAAGCCCT----AATAC-TT-GCGT-CCAG-AAGCGT-ATTTTA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_nodorum                    CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-CACG-T--TTCCTC-GGCAGGC-TTGCCTGCCGATTGGACAAACCT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTA----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACAAGTCGCGATTCTT----ATCA-AATAC-TT-GCGT-CCAC-AAGCCC-TTTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_nigrans                    CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-CACG-T--TTCCTC-GGCAGGC-TTGCCTGCCGATTGGACAAACCT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTA----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACAAGTCGCGATTCTT----ATCA-AATAC-TT-GCGT-CCAC-AAGCCC-TTTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_microscopica               CATTACAATTCAGTAGCTTGCTACT--TTGTCT-CCTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TATTC-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTCAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTGGC--CT-ATAATAC-TT-GCGT-CCAT-AAGCCT-ATTTTC-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_lycopodina                 CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_luctuosa                   CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACCTTTTTT-AATTTTCAAT-CAGCGTCTGAAAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_lindii                     CATTACAATTCAGTAGCTCGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGACTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_juncophila                 CATTAATTATCGGTAGTTTACTACC--TTGACTTTTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGAATGGACAAATCA-ATAACC-TATTT-AATATTTAAT-CAGCGTCTG--AATTATTTTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACTCTCAAGCCTTGCTTGGTGTTGGGTGTTTGTC-TCTGCTCT----GC---TTAGACTCGCCTTAAATATATTGGCAGCCG-GTATACTGGTTT--GAA-GCGCAGCAC-ATTTGCAATTCAAGC--CTGCTATTAT-TG-GTAT-CCACAAAGAAT--ATCAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_juncina                    CATTAC-ATTCAGTATTGTATGTAC--TTGTCT-TTTGAGTACT-TATG-T--TTCCTT-GGTAGGC-TTGCCTGCCAGTTGGACAACACTTATAACCTTTTTA--ATTTTCAAT-CAGCGTCTGAAATAATTT--AAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGCTTGTCCTCTCC-CT----GT-GTTTGGACTCACCTTAAAGAAATTGGCAGCCA-GTGTATTGGTTTT-GAA-GCGCAGCACAATTTGCGATTCAAGCTTATATCATCAG-CT---TT-CCAGTAAGCCT-TTTTAT-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_juncicola                  CATTAAACA-CAGTAGTTTTCTATT--TTGTCTTTTTGCGTACT-CATG-T--TTCCTC-GGCAGGC-CTGCCTGCCGATTGGAC-TCCCT-ATAACC-TTATT-AATTGTAAAT-CAGCGTCTC--AATAAT-ATAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGAGTTTGT--TCT-------------TTTGGACTCTCCCTAAATTCATTGGCAGCAG-ATATATTGTTTT--GAA-GCGCAGCACAATTTGCAATTCAAGC--CT--TTCTAT-CA-GCCC-CCAT-AAGTAT-TTT----CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_insignis                   CATTACATT-CAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_herpotrichoides_b          CATTACAATTCAGTAGCTTGCT-CT--TTGTCT-TTTGCGCACT-CTTG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CT-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_herpotrichoides_a          CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CTTG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CT-TTAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_halima                     CATTACTATAAGGCATGAATATTTA--TTGATTTTTTGCGTA-T-CCTG-T--TTCCTT-GGTAGGC-TTGCCTGCCAATTGGACAAAATC-ATAACCCT-TTT-AATATTTAAT-CAGCGTCTG--AATCATTTTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTAATCTCAAGCTATGCTTGGCGTTGGGTACTTGTCTTA-GCTGA----GC-CTAAAGACTTGCCTTAAATATATTGGCAGCCA-GTATTTTGGTTT--GAATGTGCAGCACA----GCGCCTCAAGC--TGTTAAACAC-GG-GCA-ACCATGAGAAAT-TATCACT--CTTTTGACCTCGGATCAGG
		Phaeosphaeria_fuckelii                   CATTAA-ATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGTGGGC-TTGCCTGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GT-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTC-AAC--TA-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_eustoma_b                  CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-TACG-T--TTCCTC-GGTAGGC-TTGCCTGCCGATTGGACAAACCT-ATAACC--TTTT-AAATTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTT----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTAAT-GAA-GCGCAGCACAAGTCGCGATTCTT----ATTA-AATAC-TT-GCGT-CCAC-AAGCC---TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_eustoma_a                  CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-TACG-T--TTCCTC-GGTAGGC-TTGCCTGCCGATTGGACAAACCT-ATAACC--TTTT-AAATTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTT----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTAAT-GAA-GCGCAGCACAAGTCGCGATTCTT----ATTA-AATAC-TT-GCGT-CCAC-AAGCC---TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_dennisiana                 CATTAA-TTTCGGTGGATTTCCACT--TTGTCT-TTTGAGTACC-CAAG-T--TTCCTT-GGCAGGC-TTGCCTGCCAACTGGAC-AACCT-ATAACC-CTTTT-AATTTTAAAT-CAGCGTCTG--AAAATTT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGATTGTCCTATTCATT----GC-AATAGGACTCGCCTTAAAACAATTGGCAGCCA-GTGTTTTGGCATT-GAA-GCGCAGCACATTTTGCAATTCAAGCCCT----AATAC-TT-GCGT-CCATAAAGCGT-ATGTTA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_culmorum                   CATTACATT-CAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGACTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_caricis                    CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTTT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATGC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGT
		Phaeosphaeria_caricinella                CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CATG-T--TTCCTC-GGCGGGC-TTGCCCGCCGATTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GT-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGT-CCAT-AAGCCT--TTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_caricicola                 CATTAAATACCGGTAGTTTACTACC--TTGACTTTTTGAGCACT-TGTG-T--TTCCTC-GGCAGGC-TTGCCTGCCGTATGGACAAATCA-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG--AATTAT-TTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACTCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTC-TTTGCTTT----GC---TTAGACTCGCCTTAAATATATTGGCAGCCG-GTATACTGGTTT--GAA-GCGCAGCAC-AATTGCATTTCTAGC--TTGTTATTAC-TG-GTAC-CCATTAAGAAA--ATTAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_berlesei                   CATTACAATTCAGTAGCTTGCTACT--TTGTCT-TTTGCGCACT-CCTG-T--TTCCTC-GGCGGGC-TTGCCCGCCGGTTGGACAAAACT-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG-AAAAAACT-TAAT-ATTTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCTCT----GC-GTTTGGACTCGCCTTAAAGCAATTGGCAGCCA-GTGTGTTGGTATT-GAA-GCGCAGCACATTTTGCGATTCTAGC--CG-ATAATAC-TT-GCGTCCCATCAAGCCT-CTTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_bellynckii                 CATTAAATATCGGTAGTTTACTACC--TTGACGTTTTGCGTACT-CATG-T--TTCCTC-GGTAGGC-TTGCCTGCCGGTTGGACAATTTA-ATAACC-TTTTT-AATTTTCAAT-CAGCGTCTG--AATTATCTTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACTCTCAAGCTATGCTTGGTGTTGGGTGTTTGTC-TCTGCTCT----GC---CTAGACTCGCCTTAAATATATTGGCAGCCG-GTATACTGGCTT--GAA-GCGCAGCAC-AATTGCATTTCAGGC--TTGTTATTAT-TA-GCGT-CCA-CAAGAAT--ATTAA-CACTTTTGACCTCGGATCAGG
		Phaeosphaeria_avenaria                   CATTAC-ACTCAGTAGTTTACTACT--TTGTCT-TTTGCGTACC-CACG-T--TTCCTC-GGCAGGC-TTGCCTGCCGATTGGACAAACCT-ACAACC-TTTTT-AATTTTCAAT-CAGCGTCTG--AAAAACT-TAAT-AATTACAAC-TTTCAACGACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTCCTCTCCCTA----GT-GTTTGGACTCGCCTTAAAATAATTGGCAGCCA-GTGTTTTGGTATT-GAA-GCGCAGCACAAGTCGCGATTCTT----ATCA-AATAC-TT-GCGT-CCAC-AAGCCC-TTTTTT-AACTTTTGACCTCGGATCAGG
		Phaeosphaeria_alpina                     CATTAA-TTTCGGTGGTTTTCCACT--TTGTCT-TTTGAGTACC-CAAG-T--TTCTTT-GGTAGGC-TTGCCTGCCA-TT-GAC-AACCT-ATAACC-TATTT-AATTTTAATT-CAGCGTCTG--AAAACTT-TAAT-AATTACAAC-TTTCATCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTCCTATTCTTT----GC-AATAAGACTCGCCTTAAAACAATTGGCAGCCA-G-GTTTTGGCATT-GAA-GCGCAGCACATTTTGCAATTCAAGCCCT----AATGC-TT-GCGT-CCAT-AAGCGT-ATTTTA-CACTTTTGACCTCGGATCAGG
		Phaeoseptoria_sp.                        CATTAC-ATTCAGT-------------TTGTTTTTTTGCGTACT-TATCGT--TTCCTC-GGCGGG-CTTGCCTGCCGGTTGGACAACTTT-ATAACCTTTTTA-AATCTTCAAT-CAGCGTCTG-AATAATATACAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGCTTGTCTT------T----TT-GTTAAGACTCACCTCAAAGTCATTGGCAGCCAG-TGTTTTGGTAGT--AA-GCGCAGCACATTTTGCG--TCTTGGTCCCT-CAACAG-CA-GCAT-CCATCAAGCCA-TTTTCT-CACTTTTGACCTCGGATCAGG
		Phaeoseptoria_musae                      CATTAC-ATTCAGT-------------TTGTCTTTTTGCGTACT-TATCGT--TTCCTC-GGCGGGC-TTGCCTGCCGGTTGGACAACTTT-ACAACCTTTTTA-AATCTTCAAT-CAGCGTCTG-AATAATATACAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTTTGCTTGGTGTTGGGTGCTTGTCTT------T----TT-GTTAAGACTCACCTCAAAGTCATTGGCAGCCAG-TGTTTTGGTAGT--AA-GCGCAGCACATTTTGCG--TCTTGGTCCCT-CAACAG-CA-GCAT-CCATCAAGCCA-TTTTCT-CACTTTTGACCTCGGATCAGG
		Paraphaeosphaeria_michotii               CATTATCCATCTAAAACCAGGTGCG-TTTTTTTACGA--GCACCT-TTGTT-CTCCTTC-GGCGGGG-CAACCTGCCGCT--GGAACTTAATAAAACCTTTTATCTAGCATTAC--CTGT-TCTGAT-ACAAAT--AAT-CGTTACAAC-TTTCAACAATGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATCTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CGCCTCTGCGCGC-----GGACTCGCCCCAAATTCATTGGCAGC----GGTCTTTGCCTCCTCTCGCGCAGCACA-ATTGCGTCT-GCGA--GGGGGCGTGG-CCCGCAT-CCACGAAGCAA-CATTACCGTC-TTTGACCTCGGATCAGG
		Leptosphaeria_weimeri                    CATTACCCTTCGTCAGAGGGTGGGA--ATGTC-TTTTGCGTACTATTTG-T--TTCCTT-GGTGGGC-TCGCCCGCCAACAGGAC-ACTAT-AACACC---TTTGTAATTGCAGT-CAGCGTCAG--AAAAA-CGTAAT-TATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCTCTGCTTGGTGTTGGGTGTTTG-TCTCGCCTTG-TGCGC-----AGACTCGCCTTAAAGCAATTGGCAGCCGGCAT-ATTGGCCT--GGA-GCGCAGCACATTTTGCGTCCCGGGCCA---TGATTGT-TG-GCGT-CCATCAAGACCACTTTTT--GCTCTTGACCTCGGATCAGG
		Leptosphaeria_typharum                   CATTAAATATGAAAGCGGTTTGGGG--ATGTC-TTTTGCGTAC-CTTTG-T--TTCCT-GGGTGGGC-TTGCCCACCAACAGGAC-AGTAT-TAAACC--ATTTGTAATTGCAAT-CAGCGTCAGT--ACAA-CAAAAT-AGTTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGCGTTTG-TCT--------TGTG------AGACTCGCCTTAAAATAATTGGCAGCCAGCATACTGGTATT--GGA-GCGCAGCACAAG-T-CGCGCTTTGTATC--TGAATG-CGGGCAT--CCAG-AAGCCTCTTTTTC-AACTTTTGACCTCGGATCAGG
		Leptosphaeria_taiwanensis_c              CATTAATTA--CGCAAGC-TATAGC-TTTGTCTACGT--GTACCTCTTGTTGTTTCCTC-GGCAGGC-TTGCCTGCCGCTGGGACCCCTTA--AACCCTTGTTTACAGTATGAA--AATC-TCTGATAACCATTTAAAT-TATTACAAC-TTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CG-TTTTATGCGC-----GGACTCGCCCCAAAGTCATTGGCAGC----GGTCGTGCCAGCTTCTCGCGCAGCACA-TTTGCGTTTCTTGA--AGTTTGGTGGATCAGCGT-CCAGTAAGCTA-TTTTAT-GAC--TTGACCTCGGATCAGG
		Leptosphaeria_taiwanensis_b              CATTAATTA--CGCAAGC-TATAGC-TTTGTCTACGT--GTACCTCTTGTTGTTTCCTC-GGCAGGC-TTGCCTGCCGCTGGGACCCCTTA--AACCCTTGTTTACAGTATGAA--AATC-TCTGATAACCATTTAAAT-TATTACAAC-TTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CG-TTTTATGCGC-----GGACTCGCCCCAAAGTCATTGGCAGC----GGTCGTGCCAGCTTCTCGCGCAGCACA-TTTGCGTTTCTTGA--AGTTTGGTGGATCAGCGT-CCAGTAAGCTA-TTTTAT-GAC--TTGACCTCGGATCAGG
		Leptosphaeria_taiwanensis_a              CATTAATTA--CGCAAGC-TATAGC-TTTGTCTACGT--GTACCTCTTGTTGTTTCCTC-GGCAGGC-TTGCCTGCCGCTGGGACCCCTTA--AACCCTTGTTTACAGTATGAA--AATC-TCTGATAACCATTTAAAT-TATTACAAC-TTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CG-TTTTATGCGC-----GGACTCGCCCCAAAGTCATTGGCAGC----GGTCGTGCCAGCTTCTCGCGCAGCACA-TTTGCGTTTCTTGA--AGTTTGGTGGATCAGCGT-CCAGTAAGCTA-TTTTAT-GAC--TTGACCTCGGATCAGG
		Leptosphaeria_sp._fm._Miscanthus         CATTAATTA--CGCAAGC-TATAGC-TTTGTCTACGT--GTACCTCTTGTTGTTTCCTC-GGCAGGC-TTGCCTGCCGCTGGGACCCCTTA--AACCCTTGTTTACAGTATGAA--AATC-TCTGATAACCATTTAAAT-TATTACAAC-TTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CG-TTTTATGCGC-----GGACTCGCCCCAAAGTCATTGGCAGC----GGTCGTGCCAGCTTCTCGCGCAGCACA-TTTGCGTTTCTTGA--AGTTTGGTGGATCAGCGT-CCAGTAAGCTA-TTTTAT-GAC--TTGACCTCGGATCAGG
		Leptosphaeria_sp._fm._Bouganvillea       CATTAAACGTTATATCACGGGGGGC--ATGTC-CTTTGCGTACAACATGTT--TTCCTTGGGGGGGC-TTGCTCCCCACTCGGACAAATCT-ACCACCTTTTTTGTAATTGCAGT-CTGCGTCAGATAATCA-TATAAT-TATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTG-TCTCGCGGTTCTGCG-----CAGACTCGCCTTAAAACAATTGGCAGCCGGCTTG-TTAGCCT--GGA-GCGCAGCACATATTGCGCCTCTTGCTAG--CGACTGC-TCGGCAC-CCATCAAGCCCATTTATT-TGCTCTTGACCTCGGATCAGG
		Leptosphaeria_maculans                   CATTACTCATTTTCAAAGCACTGCC--ATGTT-TTTTGCGTACTATTTG-T--TTCCTT-GGTGGGC-TTGCCCACCAATTGGAT-CCCCT-AAAACC--ACTTGCAATTGCAGT-CAGCGTCAGT-AACAA-TGTAATAAATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTGTTC----CACT-TG--------GGACTCGCCTTGAAACAATTGGCAGCCGGCA-CATTGGCCT--GGA-GCGCAGCACATTTTGCGCCTCTTGTCA---TGGTTGT-TG-GCAT-CCATCAAGACACTTTTTA-AGCTCTTGACCTCGGATCAGG
		Leptosphaeria_dryadis                    CATTAACCTTCATCGGGGGGCTGGA--ATGTC-TTTTGCGTACTATTTG-T--TTCCTT-GGTGGGC-TTGCCTGCCGATAGGAC-ATTAT-TAAACC--TTTTGTAATTGCAGT-CAGCGTCAG--AAAAA-CATAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTTTG-TCCCGTTTCT-CGCGT-----GGACTCACCTTAAAGCAATTGGCAGCCGGCAT-ATTGGCTT--GGA-GCGCAGCACATTTTGCGCCTCTTGTCA---TGATTGT-TG-GCAT-CCATCAAGACTATTTTTT--GCTCTTGACCTCGGATCAGG
		Leptosphaeria_doliolum                   CATTACCATTACCTCAACGGGGGGG--ATGTCTTTTTGCGTACAGTTTGTT--TTCCCAGCAGGGACTTTGTGCCCCTACGGGA----TAT-CAATCCACCCTTGAATTTGCAGTCCATAGTCTGAAAAATA--ATAAT-AATTACAAC-TTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGATTGTCCGCG-CTTTTTGCG-----CAGACTCGCCTTAAATCAATTGGCAGCCGGCATG-TTAGCCT--GGA-GCGCAGCACATTTTGCGCACCTTGCTGG---CGGTGT-TG-GCCC-CCATCAAGTCCATATATT-GGCTCTTGACCTCGGATCAGG
		Leptosphaeria_congesta                   CATTACCCTTTGATCAGGGGATGGG--ATGTC-CTTTGCGTACTATTTG-T--TTCCTT-GGTGGGC-TTGCCCGCCTATAGGAC-TCACA-AAACCC--ACTTGTAATTGCAGT-CAGCGTCAGTAAACAA-TGTAAT-TATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTCTGCTTGGTGTTGGGTGTATGTCTGCTGCCCT-TGGGCACGCCAGACTCGCCTTAAAGCAATTGGCAGCCGGCAT-ATCAGCCT--GGA-GCGCAGCACATTTTGCGTCCCTTGCTG---ACCGTGT-TG-GCAT-CCATCAAGACGATTTTATCAGCTCTTGACCTCGGATCAGG
		Leptosphaeria_conferta                   CATTACCCTTTCATCAGGGGATTGG--ATGTC-TTTTGCGTACTATTTG-T--TTCCTT-GGTAGGC-TTGCCTGCCAATAGGAC-AAACT-ACAACC--ACTTGTAATTGCAGT-CAGCGTCAGT-AACAA-TGTAAT-AATTACAAC-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGT------AGTGTGAATT--GCAGA-ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCCTCAAGCTTTGCTTGGTGTTGGGTGTTTGTTCTCTGCGCT-TGCGTGGAATGGACTCGCCTTAAAACAATTGGCAGCCGGCATGTTTGGCCT--GGA-GCGCAGCACATTTTGCGCCTCTTGTCA---ATGCTGT-TG-GCAT-CCATCAAGA-TCTTTTTT-AGCTCTTGACCTCGGATCAGG
		Leptosphaeria_bicolor                    CATTAATTA--CGCAAGC-TATAGC-TTTGTCTACTT--GTACCTCTTGTTGTTTCCTC-GGCAGGC-TTGCCTGCCGCTAGGGAACCCCACAAACCCTTGTTTAAAGTATCAA--AATC-TCTGATAACTATTTAAAT-TATTACAAC-TTTCAACAATGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGAAAAGT------AGTGTGAATT--GCAGA-ATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGTGGGGCATGCCTGTTCGAGCGTCATTTACACCCTCAAGCTCTGCTTGGTGTTGGGCGTCTGTCC-CG-CTTTCTGCGT-----GGACTCGCCCCAAAGTCATTGGCAGC----GGTCGTGCCAGCTTCTCACGCAGCACA-TTTGCGTTTCTTGA--AGTTTGGTGGATCAGCAT-CCAGTAAGCTC-TTTTAT-GAC--TTGACCTCGGATCAGG
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 502 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;