#NEXUS
[written Wed Jun 29 13:40:51 CST 2016 by Mesquite  version 3.10 (build 765) at KingCH-PC/192.168.0.107]

BEGIN TAXA;
	DIMENSIONS NTAX=11;
	TAXLABELS
		Crassostrea_gigas Lingula_anatina Xenopus_laevis Mus_musculus Homo_sapiens Rattus_norvegicus Strongylocentrotus_purpuratus Hydra_vulgaris Bos_mutus Pteropus_alecto Manacus_vitellinus 
	;

END;


BEGIN CHARACTERS;
	DIMENSIONS  NCHAR=912;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Crassostrea_gigas              -------------------MPCFNFLQDSAEDKADLTNP-IKNRGCTDIIILILFVLFWAGMIFIAAFSITHGDAWRLVYGYDSFGNTCDEDNTGKAVENVSFSGMNMEGKGFVFILD------ILDPVNSMKLCVNKCPGQDLNTTVDIARFAVTEGSYLCRYDIKDTDYSADLVK--KGICPGR-VFASEPL--LNRCVPKQIFSTAG-------------DIFAKFFDFVNSSDLFQKVLHDLMTGWREMLILCFVALGFGALMVLLIRFLASVIVWFIITIAIIGSIAGTAGLWWTYMDKKRFIDDKEDDNIPLLNVD----IDS--------EQAFMIYSIIATVLTVILLLVILVMRKRIGLTVTLFHEAGKCLADVPILLLQPLWTFIILVFFFVYWIIILAFLATAEKATVDKTT---------------------------GFVRYTEHENVSYLWWYHLIGLIWTSEFIIACQQLVVSGAVATWYFTRDKK-NLSCT-ICKSTKLLIFHHLGSVAFGAFIITLVKLPRWILMYMQKKTKGS---QNTCVQYAMKCCICCLWCLEKCLKYLNQNAYTVVAIQGTNFCSSAKKAFMTLVSNALRVAAINSVGDFVLFLGKIGVCAATGAVGIFWFKSKEELNYYAIPVLLVCIFAYFIAHCFLSTYEMVIDALLLCFCHDTDINDG-SPERRYYASVSLQKYIEEGSNQITAISK----GDE-----------------EPASP------------EAARL-----------------------------------------------------------------------------------------------------------------------------------------------
	Lingula_anatina                ---------------MCGCCGCGDDGKDTEDGGQRGSNPMVKKRGCTDIIVLVVFILFWVGMIYIAVYSIVNGDAFRLLYGYDSYGNTCGEKNEMTVMSN--FSGKDFHDRKYVFFMD------IIRPKSSLEVCVEKCPDRELKNAQELIAFYNETGVSLTRYDITPYECTDKDLQNTKGPCPVFPVHHSADI--LSRCIPASFSNFTS-------------NLKETVLGYLNEFDIFRYVIADLYASWKLMLLLAGIAFVLAIAVVVLIRFIASVVVWVILALAIIGSLAGTGFLWWTYVEKKNSMDMKTANEIPFLQIE----IDS--------ENAFLAYSIIATILTVILLLVILVLRKRIALAVALFNEAGKCIVAVPMILVQPVWTFICLILFYVYWVVVLAYISTAGTAVLDKDT---------------------------GFVNYEESQPVRYMWWYHLVGLIWTSEFIIACQQLVVAGAVAKWYFTRDKK-TLKNP-LGDAVCMLILHHMGSVAFGAFIITLVKLPRWILMYLHEKLNGS---QNKCAQYCLKCCICCLWCLEKCLKFLNQNAYTIVAIRGTNFCSSARKAFTTIVSNVLRVAAINSVGDFILFLGKVAVMTGTGAIGILMFKGDPNLHYFFIPVLLVFVFSYFIAHGFLSIYEMVIDALLLCFCEDCQINDGVTPGREYYMDPSLMKFVKNSSEAIAALNKRRDGGGEDVTDGGVPARESTPLRGEQPSPGGKADVTDDQQQETARI-----------------------------------------------------------------------------------------------------------------------------------------------
	Xenopus_laevis                 -----------------------MGCCGSTQNSKRDWRP-LEEHSCTDIPWLLLFILFCVGMGFICGFSIATGAASRLVFGYDSYGNICGQKN--TKIEGFINSGLDHSNNKYVFFLDPCKLDLVNRKIKSIALCVSECPREELQTLNDVKKFAETNGSALCDYSLTPSQYTTDSRA--PSLCPKLPVPKSAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIIMGLCLLSLVLSMILMVIIRYISRVLVWIITILVVLGSLGGTGVLWWLYADNKK--SLNENLPPDQLQVS----KDN--------LQALLVYAIAATVFTVILLLMMLIMRKRVALTIALFNVAGKVFIHLPLLVFQPFWTFFALLLFWVYWVMVLLFLGTAGDPFTNEQ----------------------------GFVEFRINGPLQYMWWYHLVGLIWISEFILACQQMTIAGAVVTYYFTRNKN-DLPFTPILASVNRLIRYHLGTVAKGAFIITLVKIPRMILMYIHSQLKGK---ENACARCMLKSCICCLWCLEKCLAYLNQNAYTATAINSTNFCTSAKDALVILVENALRVAAINTVGDFMLFLGKILIVSCTGLAGIMLLNYQRDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGKEFYMDKVLMEFVEDSRRALKEP-----GSTAE-------GRELKPMASGTSTA----------------------------------------------------------------------------------------------------------------------------------------------------------------
	Mus_musculus                   -------------------------------SSKREWKP-LEDRSCTDIPWLLLFVLFCIGMGFICGFSVATGAAARLVSGYDSYGNICGQRN--AKLEAIPNSGLDHTHRKYVFFLDPCNLDLINRKIKSIALCVAACPRQELKTLSDVQKFAEINGSALCSYNIKPSEYTLTSKS--SGFCPKLPVPASAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTVLVILGSLGGTGVLWWLYAKQRR--SPKEAVIPEQLQIA----EDN--------LRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTLLFLGTTGSAVQNEQ----------------------------GFVEYKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR-NLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMVLMYIHSQLKGK---ENACARCMLKSCICCLWCLEKCLSYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGREFYMDKVLMEFVENSRKAMKEAGK---GGAAD-------ARELKPMLRKR-------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Homo_sapiens                   -------------------MGCCSSASSAAQSSKREWKP-LEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKN--TKLEAVPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKS--SVLCPKLPVPASAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRR--SPKETVTPEQLQIA----EDN--------LRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQNEQ----------------------------GFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR-NLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGK---ENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGREFYMDKVLMEFVENSRKAMKEAGK---GGVAD-------ARELKPMIK---------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Rattus_norvegicus              -------------------MGCCSSAS-AAQSSKREWKP-LEDRSCTDIPWLLLFVLFCIGMGFICGFSVATGAAARLVSGYDSYGNICGQRN--AKLEAIANSGLDHTHRKYVFFLDPCNLDLINRKIKSMALCVAACPRQELKTLSDVQKFAEINGSALCSYNIKPSEYTLTAKS--SAFCPKLPVPASAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRS--SPKETVIPEQLQIA----EDN--------LRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTLLFLGTTGSAVQNEQ----------------------------GFVEYKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR-NLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGK---ENACARCMLKSCICCLWCLEKCLSYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGREFYMDKVLMEFVENSRKAMKEAGK---GGAAD-------ARELKPMLRKR-------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Strongylocentrotus_purpuratus  -----------------------------------------------------------MDLGYVTYLALRDGNPDRLIYGDDSYGNICGKKN--NPIENVSLSGRDMTDK---------------------------------------------------------------------------------------------------------------------------------PALADIEKSWREIVYLCLIAFGLSITVVIALRFLAAYIIWSMVFGFILGSMGGSGFLWYMWYIARAALRETPAEYNDWLNLSPGSNVDSGLSPDFRTLSPLHTPLRNTENITAILLLILLVMFKRIALVVTLFKEAGKAIGAMPFLLTQPLWTSLFLLSFCAAWVYIYLYIATAGHPKATPD----------------------------GLVEYVKDSFSKYMGWYYIFGLLWVTQFILACQECTIAGAIAEWFFARDK--SLLSTPILKSIYRIIRYHLGSLAFGSLLIAIIMFIRIVLGYIQSKLKGA---KSAPAQYCLKCMQCILWLFEKVLRYINRNAYIEIAIYGYNFCKAAQKAFSVLVSNALRVAAINSVGDFLLLLGKFAVTACVVVIGLQLLQDREDLNCYAIPIALAGVCAFFISHVFLLVYEMAIDTLFLCFCEDSERNDG--VQKPYFMSKQLMTFVENAKKAQAISKD-----AKD------AAKEARV------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Hydra_vulgaris                 MGCCGKNEQEPIELIAENGTANQPGKYGKTKTHDPSFNGPIKNRSCTDIICCLIFVLYIVGMLIVGFLAFSWGSPTKLLYPTDSRGNLCGVGTFADRKNLFYFDLLECIPSSLSDIYSITSCKTTQICVKDCPSQNTFYLTADKSNLYCQYEVNLNTTSKSISQLVNEGSCAKYTLQSEALAYRCIPTVVGNTLTEFLSSQSTKTNQNITSSNGKPLNEENLKWGTIAQSILLNLQNIGHRVISDIQISWYWILAAFGITMAVSLIYIFIMRWFAGLIVWLTIYLVLTITGYATYYSFTEYKRLAAN-DTSSITFVFTTNLS---SYKN-------MKSTWLVIGCICAFVLLVLILLLLALRKRISIAVQLIKEGSRSLTAMTSTLFFPIIPWFLQLILFAWFVVVLIYLSTSTSAKYEQVKNSSFTGIACDAMGAAKQFIDINNTTSCSFVIYNTNDNILRLQVFHLLGWFWLMNFIIAFGQCSLAGAFASWYWAWDKNKDIPSLPLLMSVGRTLRYHTGSLAFGSLIIAIVQLIRAALEYIEYKLTGQGAQPSPVTKFLLKCLKCCFWCLEKFLKFLNKNAYIEIAVYGKNFCVSAKNAFMLLMRNILRVAVLDKVTDFLLFIGKLSITAGMGIASFYFFHKEKNMNYYFTPIVIITVGAWVVSTAFFGVYEMAINTIFLCFLEDCERHDG-SPDKPYYMSKKLMKILNKKNKKTIDEK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Bos_mutus                      -------------------------------SSKREWKP-LEDRSCTDIPWLLLFILFCIGMGFICGFSVATGAAARLVSGYDSYGNICGQKN--AELEAIPNSGMDHTHRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTISDVQKFAEINGSALCSYDLKPSEYAS-SKA--KGLCPKLPVPASAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRILVWILTFLLILGSLAGTGVLWWLYAKQRK--SPKETVIPDQPQVA----EAN--------LRALLIYAISATVFTVILFLVMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTAGSAVQNEQ----------------------------GFVEFKMSGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR-NLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGK---ENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLAGVMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAVDTKYNDG-SPGREFYMDKVLMEFVENSRKAMKEAGK---GGVAD-------ARELKPMVGGD------------------------EGA----------------------------------------------------------------------------------------------------------------------------------------
	Pteropus_alecto                ----MLKNLETTPGQSTYLLKAVFPQKDKLKSSKREWKP-LEDRSCTDIPWLLLFILFCIGMGFICGFSVATGAAARLVSGYDSFGNICGQKN--AKLEGIPNSGMDHTHRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSDVQKFADINGSALCSYTLKPSEYTIPSKA--SGVCPKLPVPASAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWIVTVLVILGSLGGTGVLWWLYAKQRK--SPKETVIPEQLQVA----EDN--------LRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTLLFLGTAGSAVQNEQ----------------------------GFVEFRVSGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR-NLPFTPILASVSRLIRYHLGTVAKGSFIITLVKIPRMILMYLHSQLKGK---ENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGREFYMDKVLMEFVENSRKAMKEAGK---GGVAD-------ARELKPMEALQRIISTLANKNDEIQNFIDTLNQTLKGVQENSSNILTELDEEFDSLYSILDEVKESMINSIKQEQARKLQELQSQLSQCNNALENSEELLEFATRSLDIKEAEEFSKVQKKDKLWVDSKYMQKDHQQMRSGSLALFLDGQVAKTPPNVVRLEPFRMGMKMTDTK
	Manacus_vitellinus             ------------------------------KSSKREWKP-LEDHSCTDVPWLLLFILFCIGMGFICGYSIATGAAARLLSGYDSYGNICGQKN--VKVEGIVNSGLDLTHKKYVFFLDPCNIDIVHQKIKSLALCVSACPRKELKTLADIQKFAETNGSTLCSYELQSSEYTTDPRA--AKLCPKYPVPESAPIPFFHRCAPVNISCYA--------------KFAEALITFVSDSSVLHRLISGVMTSKEIIMGLCLLSLVLSMILMVIIRYISRVLVWIVTILVILGSLGGTGVLWWLYAKKRM--SAS----ALETQIA----KDN--------LQALLIYAIAATVFTVILFLIMLIMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFVLILFWAYWITVLLFLGTTGSPVPNEE----------------------------GFVEFRMVGPLKYMWWYHAVGLIWISEFILACQQMTVAGAVVTYYFTREKR-NLPFTPILASVNRLVCYHLGTVAKGSFIITLVKIPRMILMYIQTQLKGK---ENACARCMLKACICCLWCLEKCLTYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLAGVMLLNYQRDYTIWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDG-SPGREFYMDKVLMEFVENSRKSMKEAGR---GGGAE-------SRELKPM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  912;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  912;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  912;
END;

BEGIN TREES;
	Title Phylogenic_tree_of_CTLs;
	ID 01559a6506327;
	LINK Taxa = CTLs;
	TRANSLATE
[0] 		1 Crassostrea_gigas,
[1] 		2 Lingula_anatina,
[2] 		3 Xenopus_laevis,
[3] 		4 Mus_musculus,
[4] 		5 Homo_sapiens,
[5] 		6 Rattus_norvegicus,
[6] 		7 Strongylocentrotus_purpuratus,
[7] 		8 Hydra_vulgaris,
[8] 		9 Bos_mutus,
[9] 		10 Pteropus_alecto,
[10] 		11 Manacus_vitellinus;
	TREE Imported_tree_1 = ((((((((4:0.00414922,6:0.0021866):0.01274693,(9:0.02546154,10:0.01536046):0.00402752):0.01484204,5:0.012993):0.01484204,11:0.06236946):0.01855265,3:0.06698759):0.30030624,(1:0.23531656,2:0.19789846):0.09428673):0.15181532,7:0.37083368):0.07372483,8:0.6067685)[% ] [% ] [%  setBetweenBits = selected ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1467178851941;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 2160927450367938875;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 2838756105675556700;
			mqVersion 310;
			checksumv 0 3 3304304860 null  getNumChars 912 numChars 912 getNumTaxa 11 numTaxa 11   short false   bits 1048575   states 1048575   sumSquaresStatesOnly 9.8708410699006E13 sumSquares 9.8708410699006E13 longCompressibleToShort false usingShortMatrix false   NumFiles 1 NumMatrices 1;
			mqVersion;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 1366 650;
			setLocation -8 -8;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #2160927450367938875 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #2160927450367938875;
				getWindow;
				tell It;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 1266 578;
					setLocation -8 -8;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.ManageTrees.ManageTrees;
		tell It;
			showTrees 0 #mesquite.lists.TreesList.TreesList;
			tell It;
				setTreeBlock 1;
				getWindow;
				tell It;
					newAssistant  #mesquite.lists.NumForTreeList.NumForTreeList;
				tell It;
					suppress;
					setValueTask  #mesquite.trees.NumberOfTaxa.NumberOfTaxa;
					desuppress;
				endTell;
					newAssistant  #mesquite.lists.TreeListRooted.TreeListRooted;
					newAssistant  #mesquite.lists.TreeListPolys.TreeListPolys;
					newAssistant  #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 1266 578;
					setLocation -8 -8;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #2160927450367938875  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 01559a6506327;
					toggleUseWeights off;
				endTell;
				setAssignedID 1546.1467178314316.7715267216558533116;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 1266 578;
					setLocation -8 -8;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					setDigits 4;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
		tell It;
			showDataWindow #2838756105675556700 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 1266 578;
					setLocation -8 -8;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					colorCells  #mesquite.charMatrices.ColorByState.ColorByState;
				tell It;
					setStateLimit 9;
					toggleUniformMaximum on;
				endTell;
					colorRowNames  #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor;
					colorColumnNames  #mesquite.charMatrices.CharGroupColor.CharGroupColor;
					colorText  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleShowTaxonNames on;
					toggleTight off;
					toggleThinRows off;
					toggleShowChanges off;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleAutoWCharNames off;
					toggleAutoTaxonNames off;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleShowPaleGrid off;
					toggleShowPaleCellColors off;
					toggleShowPaleExcluded off;
					togglePaleInapplicable on;
					toggleShowBoldCellText off;
					toggleAllowAutosize off;
					toggleColorsPanel off;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				showWindow;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				getEmployee #mesquite.charMatrices.AlterData.AlterData;
				tell It;
					toggleBySubmenus off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector;
				tell It;
					autotabOff;
				endTell;
				getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.align.AlignToDropped.AlignToDropped;
				tell It;
					gapCosts 8 3 2 2;
					subCosts  5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5;
				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;