#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=50; TAXLABELS Glycine_max Sesbania_vesicaria Sesbania_punicea Sesbania_herbacea Sesbania_tomentosa Sesbania_rostrata Sesbania_tetraptera Sesbania_sesban Sesbania_cinerascens Sesbania_brachycarpa Sesbania_formosa Sesbania_grandiflora Sesbania_bispinosa Sesbania_microphylla Sesbania_quadrata Lotus_grandiflora Lotus_purshianus Peteria_thompsonae Robinia_neomexicana Olneya_tesota Coursetia_glandulosa Glycyrrhiza_lepidota Wisteria_floribunda Caragana_arborescens Alhagi_maurorum Astragalus_canadensis Astragalus_nothoxys Astragalus_alpinus Astragalus_americanus Oxytropis_deflexa Oxytropis_lambertii Oxytropis_parryii Oxytropis_viscida Oxytropis_pillosa Colutea_arborescens Sutherlandia_frutescensWOJ266 Swainsonia_pterostylis Vicia_faba Lathyrus_sativus Medicago_truncatula Medicago_sativa Medicago_lonigera Medicago_monantha Medicago_arabica Trigonella_foenumgraecum Trigonella_kotschyi Trifolium_repens Cicer_pinnatifidum Cicer_arietinum Galega_orientalis ; END; BEGIN CHARACTERS; TITLE Triosephosphate_Translocator; DIMENSIONS NCHAR=343; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Glycine_max GTAGGGATCAGTGGTTCTGATCTTCCTTTGAGGCAAAGACATGCAACTCCAATTAAG------GCAAGGTCGTTT---TTACCCTCTTTGTCAAGAGAAAAGGGTCAAGGATCTCTTGTTTCAGTTCAAAAGCCACTCCACATTGGTGCTTCTCTTGGTGTTGGA---AATTTTGCGTCAGTGAAGAG---TGA---------------------TGCTAAAAGG---GGTGATTTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGGTGCAAGC------ACACCGTCAGAGGCTGCAAAGAAGGTAAAAATTGGGATATATTTTGCAA Sesbania_vesicaria ATTGGGATCACCGGCTCTGGCGTTGTTCTGAGGAACAGACATGTAACCCCAGTTCAG------CCACGGTCGTTT---TTACCTTCTCTGTTAAGAGAAAAACCTCAGAGATCCCTGATTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTTGGTGTTGGA---AATTTTGGTTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTGGTGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGGC------ACACCATCAGAGGCTGTCAATAAGGTGAAAATTGGGATATATT?????? Sesbania_punicea ATAGGGATCACCGGCTCTGGCGTTGTTCTGAGGAACAGACATGTAACCCCAGTTCAG------CCACGGTCGTTT---TTACCTTCTCTGTTAAGAGAAAAACCTCAGAGATCCCTGGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTTGGTGTTGGA---AATTTTGGTTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAAGC------ACGCCATCAGTGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_herbacea GTAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACCTGCAACCCCAGTTCAG------CCACGGTCATTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAACCTCTGCACCTTGCA---TCTCTTGGTGTTGGA---AATTTTGGGTCGGTGAGGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGACAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGG????????????? Sesbania_tomentosa ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTTGGTGTTGGA---AATTTTGGGTCGGTGAGGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_rostrata ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGGCATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTTTA---TCTCTTGGTGTTGGA---AATTTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAGGCTGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_tetraptera ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGTACCTTGCA---TCTGTTGGTGTTGGA---AATTTTGGGTCGGTGAGGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTAGAGCCTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_sesban ATAGGGATCACCGGMTSTGGTGTTGTTCTGAGGAACAGACATGCAACCCCACTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTT---------------TTTGGGTCGGTGAGGAATTTTGAG------TCAGAG---AAGAATCCTGTGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAGCAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_cinerascens ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTCGCA---TCTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_brachycarpa ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCACTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_formosa ATAGGGATCACCGGCTCTGGTGTTGTTCCGATGAACAGGCATGCAACCCCACTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_grandiflora ATAGGGATCACCGGCTCTGGTGTTGTTCCGATGAACAGACATGCAACCCCACTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_bispinosa ???????????????TCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCACTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAATTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_microphylla ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTT---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTAGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Sesbania_quadrata ATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAA------CCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCTCTC---------------TTTGGGTCGGTGAAGAATTTTGAG------TCAGAG---AAGAATCCTGGGAGG---GATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGACAGATCAGAGATTGAAGCTGCAGCC------ACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAA Lotus_grandiflora ATAGGGATCACTGGTTCTGATGTTGTTTTGAGGAGAACACATGCAACCACAGTGCAG------TCACGGTCGTTT---TTACCTTCTCTGTCAACAGAAAGACCTCAGAGATCTCTGGTTTCAGTGCAAAAGCCACTGCACCTTGCAGCATCTCTTGGTGTTGGAGGAAGTTTTGGGCCTCTGGAGAATTTCGAG------TCAGAGAAGAAGAATCTCGGAAGGGGTGATGATTTGGTGAAGTGTGGAGCTTATGAGGCAGACAGATCAGAGATTGAAGCTGCAGCAGCAGCAACGCCATCAGAGGCTGCGAAGAAGGTGAAAATTGGGATATATTTTGCAA Lotus_purshianus ???GGGATCACTGGTTCTGATGTTGTTTTGAGGAGAACACATGCAACCACAGTGCAG------TCACGGTCGTTT---TTACCTTCTCTGTCAAGAGAAAGAACTCAGAGATCTCTGGTCTCAGTGCAAAAGCCACTGCACCTTGCAGCATCTCTTGGTGTTGGAGGAAGTATTGGGCCTCTGAAGAATTTCGAG------TCAGAGATGAAGAATCTCGGAAGGGGTGATGATTTGCTTAAGTGTGGAGCTTATGAGGCAGACAGATCAGAGATTGAAGCTGCAGCA------ACGCCATCAGAGGCTGCGAAGAAGGTGAAAATTGGGATATATTTTGCA? Peteria_thompsonae GTAGGGATCAATGGTTCTGATGTTGTTTTGAGGAAAAGACATGCAACCCCAGTGAAG---AATTTTGGGGTGTTT---TTACCTTCTCTGTCAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTTTGCACCTTGCA---TGTCTTGGTGTTGGA---AATTTTGGGTCAGTGGAGAATTTTGAG------ATAGAG---AAGAATCTTGGAAGA---GATGATTTGGTGAAGTGTGGGGCTTATGAGGCAGATAGATCAGAAATTGAAGCTGCAGGG------ACACCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATATTTTGCTA Robinia_neomexicana GTAGGGATCAATGGTTCTGATGTTGTTTTGASGAAAAGACATGCAACCCCAGTGAAG---AATTTTGGGTTGTTT---TTACCTTCTCTTTCAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTTTGCACCTTGCA---TGTCTTGGTGTTGGA---AATTTTGGGTCAGTGGAGAATTTTGAG------TCAGAG---AAGAATCTTGGAAGA---GATGATTTGGTGAAGTGTGRAGCTTATGAGGCAGACAGATCAGAAATTGAAGCTGCAGGG------ACRCCATCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATTTT???? Olneya_tesota GTAGGGATCAATGGTTCTGACGTTGTTTTGAGGAKAAGACATGCAACCCCAGTGAAG---AATTTTGGGTTGTTT---TTACCTTCTCTGTCAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTTTGCACCTTGCA---TGTCTTGGGGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAG------TCAGAG---AAGAATCTTGGAAGA---GATGATTTGGTGAAGTGTGGAGCTTATGAGGCAGATAGAACAGAAATTGAAGCTGCAGGG------ACACCATCAGAGGCTGCTAAGAGGGTGAAAATTGGGATATATTTTGCAA Coursetia_glandulosa GTAGGGATCAATGGTTCTGATGTTATTTTGAGGAAAAGACATGCAACCCCAGTGAAG---AAATTTGGGTTGTTT---TTACCTTCTTTCTCAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTTTGCACCTTGCA---TGTCTTGGTGGTGGG---AATTTTGGGTCAGTGGAGAATTTTGAG------TCTGGG---AAGAATCTAGTAAGA---GATGATTTGGTGAAGTGTGGGGCTTATGAGGCAGATAGATCAGAAATTGAAGCTGCAGAG------ACACCATCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATT?????? Glycyrrhiza_lepidota ATAGCGATCAGTGGTTCTGATATTGTTTTGAGGAACAGACATGCAACCCCAGTTCAG------CCACGATCGTTT---TTACCTTCTCTGCTGAGAGAAAAAGCTCAGAGATCTCTGGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TCCCTTGGTGTTGGG---AATTTTGGGCCGGTGAAGAATCTCGAT------TCAGAG---AAGATTTTTGGAAGAGGTGTTGATTTGGTGAAGTGTGGAGCGTATGAAGCAGACAGATCAGAGGTTGAAGCTGCTACG---------CCATCAGAGGCTGCCAAAAAGGTTAAAATTGGGATATATTTTGCAA Wisteria_floribunda ATKRTGATCAGTGGTTCTGATGTTGTTTTGGGGAAAAGACATGCAACCCTAATTCAA------CCACAATCGTTT---TTACCTTCTTTGGGATGGAGGAAATCWCAAAGATCYATGATTTCAGTGAAAAAGCCTTTGCATCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAG---AAGAGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGGTGCAGGR------ACACCTTCAGAGGCTGCAAAAAAAGTGAAAATTGGGATATATTTTGCA? Caragana_arborescens ATAACGATCAGTGGTTCTGATGTTGTTTTGAGGAATAGACATGCAACCCTAGTTCAG------CCAAGGTCGTTT---TTACCTTCTCTGGCAAGAGAAAAAACTCAGAGATCTCTTGTTTCTGTGAAAAAGCCTCTTCACCTTGCA---TCTCTTGGTGTTGGG---AATTTTGGGGCAGTGAAGAGTTTTGAG------ACAGAG---AAGAGTTTTGAAAGG---GATGATTTGGTGAAGTGTGGTGCATATGAAGCAGACAGATCAGAGGTTGAAGCTGCAGGG------ACACCATCTGAGGCTGCCAAAAAGGTTAAAATTGGGATATATTTTGCAR Alhagi_maurorum ATASCGATCARTGGTTCTGAYGTTGTTTTGCGCAATAGACATGCAACCCTAGTTCAG------CCACGGTCGTTT---TTACCTTCTCTGGCAAGAGAAAAAGGTCAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTTCACCTTGCA---TSTCTTGGTGTTGGA---AATTTTGGGGCAGTGAAGAATTTTGAG------TCAGAR---AAGGGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCATATGAAGCWGATASATCAGAGGTTGAAGSTGCAGGS------ACACCATSTGAGGCTGCMAAAAAAGTGAAAATTGGCATAKATTTTGCAA Astragalus_canadensis ATAACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACTTGCAACCCCAATTCAG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCACTGCAAAAGCCTCTGCACCTTGCA---TGTCTTGGTGTTGGA---AACTTTGGATCAGTGAAGAATTTTGAG------TCAGAA---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGGG------ACACCAAGTGAGGCTGCCAAAAAGGTGAAAATTGGGTTATATTTTGC?? Astragalus_nothoxys ATAACGATCAGTGGTTCCGATATTGTTTTGGGGAAAAGACATGCAACCCCAATTCAG------GCACTGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTTGGTGTYGGA---AAATTTGGA------------------------TCAGAG---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGGG------ACACCAACTGAGGCTGCCAAAAAGGTCAAAATTGGGTTATATTTTGCAA Astragalus_alpinus ATAACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACATGCAACTCCAATTCGG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTTGGTGTTGGT---AAATTTGGATCAGTGAAGAATTTTGAG------TCAGAG---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGGG------ACACCAACTGAGGCTGCC??????????????????????????????? Astragalus_americanus ATAACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACATGCAACCCCAATTCAG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTCTTGGTGTTGGA---AAATTTGGGTCAGTGAAGAATTTTGAG------TCAGAG---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGAAGCCTATGAAGCTGATAAATCAGATGTTGAAGCTGCAGGG------ACACCAACTGAGGCTGCCAAAAAGGTGAAAATTGGGTTATATTTTGCAA Oxytropis_deflexa ATAACGATCAGTGGTTATGAAATTGTTTTGGGGAAAAGACATGCAACCCTAATTCAG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAGAAAACTCAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAT---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGAG------ACACCAACTGAGGCTGCAAAAAAAGTGAAAATTGGGTTATATTTTGCAA Oxytropis_lambertii ATAACGATCAGTGGTTCTGAAATTGTTTTGGGGAAAAGACATGCAACCCTAGTTCAG------CCACGGTCGTTT---TTACCTTCTRTGGGAAGAGAAAAAACTGAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTSCACCTTGCA---TGTGTTGGTGTTGGG---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAT---YAGAGTTTTGYAAGG---GATGATTTGGTGAAGTGTGGAGCATATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGAG------ACACCAACTGAGGCTGCAAAAAAGGTGAAA??????????????????? Oxytropis_parryii ATAACGATCAGTGGTTCTGAAATTGTTTTGGGGAAAAGACATGCAACCCTAGTTCAG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAACTCAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTCCACCTTGCA---TGTGTTGGTGTTGGG---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAT---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCATATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGAG------ACACCAACTGAGGCTGCCAAAAAGGTGAAAATTGGGTTATATTTTGCAA Oxytropis_viscida ATAACGATCAGTGGTTCTGAAATTGTTTTGGGGAAAAGACATGCAACCCTAGTTCAG------CCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAACTCAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTCCACCTTGCA---TGTGTTGGTGTTGGG---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAT---AAGAGTTTTGAAMGG---GATGATTTGGTGAAGTGTGGAGCATATGAAGCTGATAAATCAGAGGTTGAAGGTGCAGAG------ACACCAACTGAGGCTGCCAAAAAGGTGAAAATTGGGTTATATTTTGCAA Oxytropis_pillosa ATAACGATCAGTGGTTCTGAAATTGTTTTGGGGAAAAGACATGCAACCCTAATTCAG------CCACGGTCGTTT---TTACCTTCTCTAGGAAGAGASAAAACTCAAAGATCTCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAT---AAGAGTTTTGGAAGG---GATGATTTGGTGAAGTGTGGAGCCTATGAAGCTGATAAATCAGAGGTTGAAGGTTCAGAG------ACACCAACTGAGGCTGCAAAAAARGTGAAAATTGGGTTATATTTTGCAA Colutea_arborescens ??AACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACATGCAACCCCAGTTCAG------GCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCGGTGCAAAAGCCTCTGCACCTTGCA---TGCCTTGGTGTTGGA---AATTTTGGGTCGGTGAAGAATTTTGAG------TCAGAC---TTGAGTTTTGGAAGA---GATGATTTGGTGAAGTGTGGGGCCTATGAAGCTGATAAATCAGAGATTGAAGCGGCAGGG------ACACCAACAGAGGCTGCCAAAAAGGTGAAAATTGGGTTATATTTTGCAA Sutherlandia_frutescensWOJ266 ATAACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACATGCAACCCCAGTTCAG------GCACGATCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATCTCTTGTTTCGGTGCAAAAGCCTCTGCACCTTGCA---TGCCTTGGTGTTGGA---AATTTTGGGTCGGTGAAGAATTTTGAG------TCAGAC---TTGAGTTTTGGAAGG---GATGGTTTGGTGAAGTGTGGGGCCTATGAAGCTGATAAATCAGAGATTGAAGCGGCAGGG------AAACCAACAGAGGCTGCCAAAAAGGTGAAAA?????????????????? Swainsonia_pterostylis ATAACGATCAGTGGTTCCGAAATTGTTTTGGGGAAAAGACATGCAACCCCAGTTCAG------GCACGGTCGTTT---TTACCTTCTCTGGGAAGAGAAAAAGCTCAGAGATTTCTTGTTTCGGTGCAAAAGCCTCTGCACCTTGCA---TGCCTTGGTGTTGGA---AATTTTGGGTTGGTGAAGAATTTTGAG------TCAGAC---TTGAGTTTTGGAAGG---GATGGTTTGGTGAAGTGTGGGGCCTATGAAGCTGATAAGTCAGAGATTGAAGCGACAGGG------ACACCAACAGAGGCTGCCAAAAAGGTYAAAA?????????????????? Vicia_faba ATTTCGATCAGTGGTTCTGATGTTGTTTTAAGGAAAAGACATGCAACCCTAATTCAGCCACAACCACAATCGTTT---TTACCTTTACTGTCAAGAGGGAAATCACTGAGATCTGTTGTTTCGTTGAAGAAGCCTCTTCATCTTGCA---TGTATTGGTGTTGGA---AATTTTGGGTCAGTGGAGAAATTTGAA------TCAGAT---GAGAGTTTTGGGAAA---AGTGATTTGGTGAAGTGTGGAGCTTATGAAGGTGATAGATCAGAGGTTGAAGGTGGTGGT---GGAGCATCATCAGAGGCTGCTAAGAAGGTGAAAATCGGGATATACTTTG??? Lathyrus_sativus ?TTTCGATCAGTGGTTCCGGTGTTGTTTTAAGGAAAAGACATGTAACCCTAATTCAGCCACAACCACAATCGTTT---TCACCTCTCTTGTCAAGAGAGAAATCACATAGATCTGTTGTTTCAATGAAGAAGCCTCTTCATCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCTGTGAAGAATTTTGAG------TCCGAG---GAGAGTTTTGGGAAA---AGTGATTTGGTGAAGTGTGGGGCTTATGAGGCTGATAGATCAGAGGTTGAAGGTGGTGGTGGTGGAGCCCCATCTGAGGCTGCTAAGAAGGTGAAAATTGGGATATATTTTGCG? Medicago_truncatula ?TTGTGATCACTGGTTCTGATGCCGGTTTAAGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---CTCCCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTGATTTCAATGAAGAAGCCTCTTCATATTGCA---TGTGCTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAATTTGAATCAGAGAAGAAGAGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGGAGCAGAA------ACACCTTCAGAGGCTGCAAAGAAAGTGAAAA?????????????????? Medicago_sativa ?TTGTGATCACTGGTTCTGATGCTGGTTTAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTTTTTTCATTGAAAAAGCCTYTTCATATTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAG---AAGAGTTTTGAAAAG---GGAGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGATTGAAGGTGCAGGA------ACACCTTCAGAGGCTGCAAAGAAATTGAAAATTGG?????????????? Medicago_lonigera ATTGTGATCACTGGTTCTGATGCTGTTTTAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTGGAAAATCACAAAGATCCGTGATTTCAATGAAAAAGCCTTTGCATCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTAAAGAATTTTGAA------TCAGAG---AAGAGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGGTGCAGGA------ACACCTTCAGAGGCTGCAAAAAAAGTGAAAATTGGGATATATTTTGCAA Medicago_monantha ATTGTGATCAATAGTTCTGATTCTGTTTTAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTGGAAAATCACAAAGATCTATGATTTCAATGAAAAAGCCTCTTCATATTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAC---AAGAGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGGTGCAGGA------ACACCTTCAGAGGCTGCAAARAAAGTGAAAATTGGGATATATTTTGCAA Medicago_arabica ATTGTGATCACTGGTTCTGATGCTGGTTTAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTGATTTCAATGAAGAAACCTCTTCATATTGCA---TGTGCTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAATTTGAATCAGAG---AAGAGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGATTGAAGGTGCAGAA------ACACCTTCAGAGGCTGCAAAGAAAGTGAAAATTGGGATATATTTTGCAA Trigonella_foenumgraecum ????????CAATGGTTGTGATGTTGTTTCAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTGATTTCAGTGAAAAAGCCTTTGCATATTACA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAAAG------AGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAGGCTTATGAAGCCGATAGATCAGAGGTTGAAGGTGCAGAA------ACACCATCAGAGGCTGCTAAGGAAGTGAAAATTGGGATATATTTTGCAA Trigonella_kotschyi TTAGGGATCAATGGTTGTGATGTTGTTTTAGGGAAAAGACATGCAACCCTAGTTCAA------CCACAATCTTTT---TTACCATCTTTGGTTGGTAGAAAATCACAAAGATCTGTGATTTCAGTGAAAAAGCCTTTGCATATTACA---TGTATTGGTGTTGGA---AATTTTGGGTCAGTGAAGAATTTTGAA------TCAGAG---AAAGGTTTTGAAAAG---GGTGATTTGGTGAAGTGTGAGGCTTATGAAGCTGATAGATCAGAGGTTGAAGGTGCAGGA------ACACCTTCAGAGGCTGCTAAGAAAGTGAAAATTGGGATATATTTTGCAA Trifolium_repens ???GCGATCAGTGGTTCTGATGTTGTTTTTGGGAAAAGACATGCAACCCTAATTCAA------CCACGGTCTTTT---TTACCATCTTTGATWAGTGAAAAATCACATAGATCTGTTGTTTCATTGAAAAGGCCTCTTCATATTGCA---TGTCTTGGTGTTGGA---AATTTTGGGTCAGTGAAAAATTTTGAG------ACAGAG---AAGAGTTTTGAAAAG---GGTGATTTGGTTAAGTGTGGTGCTTATGAAGCTGATAGATCAGAGGTTGAAGATGCAGGA------ACACCATCAGAAGCTGCAAAAAAAGTGAAAATGGGAATATATTTTGCAA Cicer_pinnatifidum ????????????GGTTCTGATGGTGTTTTAAGGAAAAGACATGGAACCCTAGTTCAA------CCACAGTCGTTT---TTACCTTCATTGGTAAGAGGAAAATCCCAGAGATCTCTTGTTTCAGTGCAAAAGCCTCTTCACCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGCGAAGAGTTTTGAT------TCAGTG---AAGGGTTTTGGAAGT---GATGACTTGGTTAAGTGTGAAGCCTATGAAGCTGATAGATCAGAGGTTGAAGGTGCAGGA------ACACCATCAGAAGCTGCAAAAAAAGTGAAAATTGGG????????????? Cicer_arietinum ATAGCGATCAGTGGTTCTGATGTTGTTTTAAGGAAAAGACATGGAACCCTAGTTCAA------CCACAGTCGTTT---TTACCTTCACTGGTAAGAGGAAAATCACAGAGATCTCTTGTTTCAGTGCAAAAGCCTCTTCACCTTGCA---TGTGTTGGTGTTGGA---AATTTTGGGTCAGTGAAGAGTTTTGAT------TCAGTG---AAGGGTTTTGGAAGT---GATGATTTGGTTAAGTGTGAAGCCTATGAAGCTGATAGATCGGAGGTTGAAGGTGCAGCA------ACACCATCAGAAGCTGCAAAAAAAGTGAAAATTGGGATATATTTTGCA? Galega_orientalis ATTGCGATCAGTGGTTCTGATGTTGTTTTAGGGAAAAGACATGCAACCCTAGTTCAG------CCACAGTTGTTTTTTTTACCTTCATTGGTGAGAGAAAAAACACATAGATCTATTGTTTCAGTGCAAAAACCTCTTCATCTTGCA---TGTCTTGGTGTTGGA---AATTTAGGGTCAGTGAAGAATTTTGAG------TTAGGG---AAGAGTGTTGGAAAA---AATGATTTGGTGAAGTGTGAGGCTTATGAAGCTGATAGATCAGAGATTGAACCTGCAGGA------ACACCATCAGAAGCTGCAAAAAAAGTGAAAATTGGGATATATTTTGCA? ; END; BEGIN TREES; Title Triosephosphate_Translocator_TB; LINK Taxa = Taxa; TRANSLATE 1 Glycine_max, 2 Sesbania_vesicaria, 3 Sesbania_punicea, 4 Sesbania_herbacea, 5 Sesbania_tomentosa, 6 Sesbania_rostrata, 7 Sesbania_tetraptera, 8 Sesbania_sesban, 9 Sesbania_cinerascens, 10 Sesbania_brachycarpa, 11 Sesbania_formosa, 12 Sesbania_grandiflora, 13 Sesbania_bispinosa, 14 Sesbania_microphylla, 15 Sesbania_quadrata, 16 Lotus_grandiflora, 17 Lotus_purshianus, 18 Peteria_thompsonae, 19 Robinia_neomexicana, 20 Olneya_tesota, 21 Coursetia_glandulosa, 22 Glycyrrhiza_lepidota, 23 Wisteria_floribunda, 24 Caragana_arborescens, 25 Alhagi_maurorum, 26 Astragalus_canadensis, 27 Astragalus_nothoxys, 28 Astragalus_alpinus, 29 Astragalus_americanus, 30 Oxytropis_deflexa, 31 Oxytropis_lambertii, 32 Oxytropis_parryii, 33 Oxytropis_viscida, 34 Oxytropis_pillosa, 35 Colutea_arborescens, 36 Sutherlandia_frutescensWOJ266, 37 Swainsonia_pterostylis, 38 Vicia_faba, 39 Lathyrus_sativus, 40 Medicago_truncatula, 41 Medicago_sativa, 42 Medicago_lonigera, 43 Medicago_monantha, 44 Medicago_arabica, 45 Trigonella_foenumgraecum, 46 Trigonella_kotschyi, 47 Trifolium_repens, 48 Cicer_pinnatifidum, 49 Cicer_arietinum, 50 Galega_orientalis; TREE PAUP_1 = (1,((2,3)99.330002,(4,5,6,7,8,9,(10,(11,12)82.000000,13)75.736664,14,15)94.823387),(16,17),(18,19,20,21)99.000000,22,(((((23,(((40,44)87.559998,41)69.346664,42,43,(45,46)98.180000)62.454323)94.870003,47)67.949997,(38,39))63.939999,50)68.309998,(48,49))96.820000,(24,25)59.160000,((((26,27,28)68.757690,29)56.515354,(35,(36,37)64.150002))55.679958,((30,34)93.356232,(31,(32,33)57.004581)67.732941)98.199997)93.610001); END;