#NEXUS [written Thu May 13 16:00:23 EDT 2010 by Mesquite version 2.7 (build 510) at dhcp128036182040.central.yale.edu/128.36.182.40] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=20; TAXLABELS Ruppia_tuberosa_TUE0101 Ruppia_tuberosa_TUE0102 Ruppia_maritima_ANA01 Ruppia_polycarpa_DEV01 Ruppia_maritima_DUB0201 Ruppia_maritima_DUB0202 Ruppia_polycarpa_POB01 Syringodium_isoetifolium_Sis03 Ruppia_maritima_MAR01 Ruppia_maritima_SKA0202 Ruppia_tuberosa_TUA0100 Ruppia_tuberosa_TUA0114 Ruppia_megacarpa_MED01 Ruppia_maritima_UTA01 Ruppia_maritima_YHO01 Ruppia_maritima_GRA01 Potamogeton_maackianus_Pm052 Ruppia_maritima_FAL0111 Ruppia_maritima_FAL0113 Ruppia_maritima_MAH02 ; END; BEGIN CHARACTERS; TITLE RuppiaPhyB_38Fdw; DIMENSIONS NCHAR=1050; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Ruppia_tuberosa_TUE0101 CGCTTGCAGGCTTTGCCTGGGGGAGATATTAAGTTTCTGTGTGATACTGTTGTGGATCATGTTAGGGAGCTGACTGGGTATGATAGGGTTATGGTTTATA Ruppia_tuberosa_TUE0102 CGCTTGCAGGCTTTGCCTGGGGGAGATATTAAGTTTCTGTGTGATACTGTTGTGGATCATGTTAGGGAGCTGACTGGGTATGATAGGGTTATGGTTTATA Ruppia_maritima_ANA01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTCCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_polycarpa_DEV01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_maritima_DUB0201 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTACA Ruppia_maritima_DUB0202 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGATAGGGTTATGGTGTATA Ruppia_polycarpa_POB01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACTGTTGTTGACCATGTTAGGGAGCTCACTGGGTATGACAGGGTTATGGTGTACA Syringodium_isoetifolium_Sis03 CGGCTGCAAGCTCTACCTGGTGGAGACATCAAGCTTCTCTGTGACACGGTTGTGAACCACGTCAGGGAGCTCACGGGCTACGACAGGGTCATGGTCTACA Ruppia_maritima_MAR01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGATAGGGTTATGGTGTATA Ruppia_maritima_SKA0202 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTACA Ruppia_tuberosa_TUA0100 CGGTTGCAGGCTCTGCCTGGGGGAGATATTAAGTTCCTGTGTGATACTGTTGTGGATCATGTTAGGGAGCTTACTGGTTATGATAGAGTTATGGTTTATA Ruppia_tuberosa_TUA0114 CGGTTGCAGGCTCTGCCTGGGGGAGATATTAAGTTTCTGTGTGATACTGTTGTGGATCATGTTAGGGAGCTCACTGGGTATGATAGAGTTATGGTGTATA Ruppia_megacarpa_MED01 CGGTTACAGGCTTTGCCAGGTGGAGATATTAAGTTTCTGTGTGACACAGTTGTGGACCATGTTAGGGAACTCACTGGATATGATAGGGTTATGGTCTACA Ruppia_maritima_UTA01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTACA Ruppia_maritima_YHO01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTCCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_maritima_GRA01 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGATAGGGTTATGGTGTATA Potamogeton_maackianus_Pm052 AGGTTGCAGGCGCTGCCTGGTGGGGATATCAATCTTTTATGTGACACAGTTGTGGACCATGTTAGGGAACTCACAGGATATCACAGGGTCATGGTCTACA Ruppia_maritima_FAL0111 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTTTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_maritima_FAL0113 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_maritima_MAH02 CGTTTACAGGCTTTGCCGGGTGGGGATATTAAGTTTCTGTGTGACACGGTTGTTGACCATGTTAGGGAGCTCACTGGATATGACAGGGTTATGGTGTATA Ruppia_tuberosa_TUE0101 AGTTTCATGAGGATGAGCATGGGGAGGTGCTTGCTGAGAGTAAGAGGAGTGACTTGGAACCGTATATTGGGCTCCATTATCCTGCGACGGATATTCCCCA Ruppia_tuberosa_TUE0102 AGTTTCATGAGGATGAGCATGGGGAGGTGCCTGCTGAGAGTAAGAGGAGTGACTTGGAACCGTATATTGGGCTCCATTATCCTGCGACGGATATTCCCCA Ruppia_maritima_ANA01 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_polycarpa_DEV01 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAGGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_DUB0201 AGTTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGCGACTTGGAACCTTATATAGGTCTTCACTACCCTGCCACAGATATACCCCG Ruppia_maritima_DUB0202 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_polycarpa_POB01 AGTTCCATGAGGATGAGCATGGGGAAGTTCTTGCTGAGAGTAAAAGAAGTGACTTGGAACCTTACATAGGTCTCCATTACCCTGCCACAGACATACCCCA Syringodium_isoetifolium_Sis03 GGTTCCATGAGGATGAGCATGGGGAGGTTGTCGCAGAGAGCAAAAGGGGCGACTTGGAGCCGTATATAGGACTCCATTATCCTGCCACCGACATACCTCA Ruppia_maritima_MAR01 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACGGACATACCCCA Ruppia_maritima_SKA0202 AGTTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGCGACTTGGAACCTTATATAGGTCTTCACTACCCTGCCACAGATATACCCCA Ruppia_tuberosa_TUA0100 AGTTTCATGAGGATGAGCATGGGGAGGTGCTTGCTGAGAGTAAGAGGAGTGATTTGGAGCCGTATATTGGGCTCCATTATCCTGCGACGGATATTCCCCA Ruppia_tuberosa_TUA0114 AGTTTCATGAGGATGAGCATGGGGAGGTGCTTGCTGAGAGTAAGAGGAGTGATTTGGAGCCGTATATTGGGCTCCATTATCCTGCGACGGATATTCCCCA Ruppia_megacarpa_MED01 AGTTCCATGAGGATGAGCATGGGGAAGTTCTTGCTGAGAGTAAAAGAAGTGACTTGGAACCGTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_UTA01 AATTCCACGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAGGTGACTTGGAACCCTATTTAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_YHO01 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_GRA01 AATTCCATGAGGATGAGCATGGGGAAGTTCTCTCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACGGACATACCCCA Potamogeton_maackianus_Pm052 AGTTCCATGAGGATGAACATGGCGAGGTTGTTGCAGAGAGTAAAAGGGACGACTTAGAACCATATATGGGTCTTCACTACCCTGCCACAGATATACCCCA Ruppia_maritima_FAL0111 AGTTCCATGAGGATGAGCATGGGGAAGTTCTGGCCGAGAGTAAAAGAAATGACTTGGAACCTTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_FAL0113 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAGGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_maritima_MAH02 AATTCCATGAGGATGAGCATGGGGAAGTTCTCGCCGAGAGTAAAAGAAGTGACTTGGAACCCTATATAGGTCTCCATTACCCTGCCACAGACATACCCCA Ruppia_tuberosa_TUE0101 GGCGTCGAGGTTCTTGTTTAAGCAGAATAGAGTTAGGATGATTGCTGATTGTCGTGCGACTCCGGTTAGTATGATACAAGATGAGAATTTGATGCAGCCG Ruppia_tuberosa_TUE0102 GGCGTCGAGGTTCTTGTTTAAGCAGAATAGAGTTAGGATGCTTGCTGATTGTCGTGCGACTCCGGTTAGTATGATACAAGATGAGAATTTGATGCAGCCG Ruppia_maritima_ANA01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_polycarpa_DEV01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_DUB0201 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGAATGATAGCTGACTGTCGTGCAACGCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_DUB0202 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTGCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_polycarpa_POB01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCA Syringodium_isoetifolium_Sis03 GGCCGCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGATTGCCGGGCAACGCCCGTCCGAATGGTACAAGATGAGAATCTAATGCAGCCC Ruppia_maritima_MAR01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_SKA0202 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGAATGATAGCTGACTGTCATGCAACGCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_tuberosa_TUA0100 GGCGTCGAGGTTCTTGTTTAAGCAGAATAGAGTTAGGATGATCGCTGATTGTCGTGCGACTCCGGTTAGTATGATACAGGATGAGAATCTTATGCAGCCT Ruppia_tuberosa_TUA0114 GGCGTCGAGGTTCTTGTTCAAGCAGAATAGAGTTAGGATGATTGCTGATTGTCGTGCGACTCCGGTTAGTATGATACAGGATGAGAATTTGATGCAGCCG Ruppia_megacarpa_MED01 AGCCTCAAGGTTCTTATTTAAACAGAACAGAGTTAGGATGATAGCTGATTGTCGTGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCA Ruppia_maritima_UTA01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_YHO01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_GRA01 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Potamogeton_maackianus_Pm052 AGCCTCAAGATTCTTGTTCAAACAAAATAGAGTTAGGATGATAGCAGATTGTCGTGCAACCCCTGTTCGAGTCATACAAGATGAGAATCTGATGCAACCA Ruppia_maritima_FAL0111 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGCCATGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_FAL0113 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCTGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_maritima_MAH02 AGCCTCAAGGTTCTTGTTTAAACAGAACAGAGTTAGGATGATAGCTGACTGTCGTGCAACTCCAGTTAGCATGATACAAGATGAGAACCTGATGCAGCCG Ruppia_tuberosa_TUE0101 CTTTGCCTTGTTGGATCGACGCTACGAGCACCTCATGGGTGCCACGCGCAGTACATGGCGAACATGGGGTCGATTGCTTCGCTTGTTATGGCTGTTATTA Ruppia_tuberosa_TUE0102 CTTTGCCTTGTTGGATCGACGCTACGAGCACCTCATGGGTGCCACGCGCAGTACATGGCGAACATGGGGTCGATTGCTTCGCTTGTTATGGCTGTTATTA Ruppia_maritima_ANA01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_polycarpa_DEV01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCGCAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_DUB0201 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGATGCCATGCGCAATACATGGCTAACATGGGCTCAGTTGCTTCTCTTGTCATGGCTGCTATCA Ruppia_maritima_DUB0202 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_polycarpa_POB01 CTTTGCCTTGTAGGATCCACACTACGTGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAGTTGCTTCTCTTGTCATGGCTGTTATCA Syringodium_isoetifolium_Sis03 CTCTGCCTTGTTGGATCCACTTTGCGAGCTCCACATGGTTGCCATGCACAATACATGGCCAACATGGGCTCAATTGCTTCGCTTGTTATGGCTGTAATCA Ruppia_maritima_MAR01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_SKA0202 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGATGCCATGCGCAATACATGGCTAACATGGGTTCAGTTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_tuberosa_TUA0100 CTTTGCCTTGTCGGATCGACGCTACGAGCGCCTCATGGTTGTCATGCGCAGTACATGGCTAACATGGGGTCGATTGCTTCGCTTGTTATGGCTGTTATCA Ruppia_tuberosa_TUA0114 CTTTGCCTTGTCGGATCGACGCTGCGAGCACCTCATGGTTGTCATGCGCAGTACATGGCGAACATGGGGTCGATTGCTTCGCTTGTTATGGCTGTTATTA Ruppia_megacarpa_MED01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGGTCAGTTGCTTCTCTTGTTATGGCTGTTATCA Ruppia_maritima_UTA01 CTTTGCCTTGTAGGATCCACATTACGAGCTCCTCATGGCTGCCATGCGCAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_YHO01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_GRA01 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Potamogeton_maackianus_Pm052 CTTTGCCTTGTGGGTTCCACTCTACGAGCTCCCCATGGTTGCCATGCACAGTATATGGCCAACATGGGATCAATTGCATCTCTTGCCATGGCTGTAATTA Ruppia_maritima_FAL0111 CTTTGCCTTGTAGGATCCACACTAAGAGCTCCTCATGGCTGCCATGCGCAATACATGGCTAACATGGGCTCAGTTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_FAL0113 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCGCAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_maritima_MAH02 CTTTGCCTTGTAGGATCCACACTACGAGCTCCTCATGGCTGCCATGCACAATACATGGCTAACATGGGCTCAATTGCTTCTCTTGTCATGGCTGTTATCA Ruppia_tuberosa_TUE0101 TTAATGGGGGTGAGGAGGATGGGACAAGGAACTCTATGAAGCTTTGGGGGCTTGTTGTTTGCCACCATACTTCTCCGAGATGCATTCCGTTTCCGTTGCG Ruppia_tuberosa_TUE0102 TTAATGGGGGTGAGGAGGATGGGACAAGGAACTCTATGAAGCTTTGGGGGCTTGTTGTTTGCCACCATACTTCTCCGAGATGCATTCCGTTTCCGTTGCG Ruppia_maritima_ANA01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_polycarpa_DEV01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_maritima_DUB0201 TCAATGGGGGCGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_maritima_DUB0202 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_polycarpa_POB01 TTAATGGGGGTGAAGAAGATGGCACACGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Syringodium_isoetifolium_Sis03 TTAATGGAGGTGAAGAGGAGAGCTCCAGGAAATCCATGAAGCTATGGGGCCTAGTTGTCTGTCATCACACTTCCCCTAGATGCATTCCATTTCCACTGCG Ruppia_maritima_MAR01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_maritima_SKA0202 TCAATAGGGGCGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_tuberosa_TUA0100 TTAATGGGGGTGAGGAGGATGGGACTAGGAACTCTATGAAGCTTTGGGGGCTTGTTGTTTGCCACCATACTTCTCCGAGATGCATTCCGTTTCCGTTGCG Ruppia_tuberosa_TUA0114 TTAATGGGGGTGAGGAGGATGGGTCAAGGAACTCTATGAAGCTGTGGGGGCTTGTTGTTTGCCACCATACTTCTCCGAGATGCATTCCGTTCCCATTGCG Ruppia_megacarpa_MED01 TTAATGGGGGAGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_maritima_UTA01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATATCCATTGCG Ruppia_maritima_YHO01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_maritima_GRA01 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Potamogeton_maackianus_Pm052 TCAATGGAGGTGAAGAAGAGGGTACGAAGAACTCGATGAAGTTATGGGGTCTCGTTGTTTGTCACCACACTTCTCCGAGGTTCATACCCTTCCCATTGCG Ruppia_maritima_FAL0111 TCAATGGGGGCGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCACTGCG Ruppia_maritima_FAL0113 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTTTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCACTGCG Ruppia_maritima_MAH02 TCAATGGGGGTGAAGAAGACGGCACAAGGAACTCTATGAAGCTATGGGGCCTTGTTGTTTGCCACCATACTTCTCCCAGATGCATTCCATTTCCATTGCG Ruppia_tuberosa_TUE0101 CTATGCTTGTGAGTTTCTTATGCAGGCTTTGGGTCTTCAGCTTAATATGGAGGTTCAGTTGGCTGCCCAGATGTCTGAGAAGCACATATTGAGAACTCAG Ruppia_tuberosa_TUE0102 CTATGCTTGTGAGTTTCTTATGCAGGCTTTGGGTCTTCAGCTTAATATGGAGGTTCAGTTGGCTGCCCAGATGTCTGAGAAGCACATATTGAGAACTCAG Ruppia_maritima_ANA01 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_polycarpa_DEV01 CTATGCCTGTGAGTTCCTCATGCAGGCTCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_maritima_DUB0201 CTATGCCTGTGAGTTCCTCATGCAGGCTCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTAAGAACTCAA Ruppia_maritima_DUB0202 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_polycarpa_POB01 CTATGCCTGTGAGTTCCTAATGCAGGCTCTAGGCCTCCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Syringodium_isoetifolium_Sis03 ATATGCCTGCGAGTTCCTCATGCAGGCCTTTGGGCTTCAGCTAAATATGGAACTTCATTTGGCATCTCAGCTGTCCGAGAAGCACATCTTGCGGACTCAG Ruppia_maritima_MAR01 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_maritima_SKA0202 ATATGCCTGTGAGTTCCTCATGCAGGCTCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTAAGAACTCAA Ruppia_tuberosa_TUA0100 CTATGCTTGTGAGTTTCTTATGCAGGCTTTGGGTCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAGAAGCACATATTGAGAACTCAG Ruppia_tuberosa_TUA0114 CTATGCTTGTGAGTTTCTTATGCAGGCTTTGGGTCTTCAGCTTAATATGGAGGTTCAGTTGGCTGCCCAGATGTCTGAGAAGCACATATTGAGAACTCAG Ruppia_megacarpa_MED01 CTATGCCTGTGAGTTCCTCATGCAGGCTCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAACACATATTAAGAACTCAA Ruppia_maritima_UTA01 CTATGCCTGTGAGTTCCTCATGCAGGCTCTAGGCCTTCAGCTAAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_maritima_YHO01 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_maritima_GRA01 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Potamogeton_maackianus_Pm052 GTATGCATGCGAGTTCCTTATGCAGGCTTTTGGCCTTCAGTTGAATATGGAACTCCAGTTGGCCTCCCAAATGTCTGAGAAGCATATCTTGAGAACCCAG Ruppia_maritima_FAL0111 CTATGCCTGTGAGTTCCTCATGCAGGCTTTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCCGAAAAGCACATATTAAGAACTCAA Ruppia_maritima_FAL0113 CTATGCCTGTGAGTTCTTCATGCAGGCTCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_maritima_MAH02 CTATGCCTGTGAGTTCCTCATGCAGGCCCTAGGCCTTCAGCTTAATATGGAAGTTCAGTTGGCTGCCCAGATGTCTGAAAAGCACATATTGAGAACTCAA Ruppia_tuberosa_TUE0101 ACGCTTCTGTGTGATATGCTTCTTAGAGATTCTCCTACTGGGATTGTTACACAGAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCTGCGCTCT Ruppia_tuberosa_TUE0102 ACGCTTCTGTGTGATATGCTTCTTAGAGATTCTCCTACTGGGATTGTTACACAGAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCTGCGCTCT Ruppia_maritima_ANA01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCACTCT Ruppia_polycarpa_DEV01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Ruppia_maritima_DUB0201 ACCCTTCTATGTGATATGCTTCTTCGGGATTCTCCTACTGGAATTGTTACACAAAATCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCAGCGCTCT Ruppia_maritima_DUB0202 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Ruppia_polycarpa_POB01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCGCTCT Syringodium_isoetifolium_Sis03 ACACTTTTGTGTGACATGCTTCTTCGTGATTCTCCCACTGGAATTGTCACACAGAGTCCTAGCATAATGGATCTTGTTAAGTGTGATGGGGCTGCGCTCT Ruppia_maritima_MAR01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Ruppia_maritima_SKA0202 ACCCTTCTATGTGATATGCTTCTTCGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCAGCGCTCT Ruppia_tuberosa_TUA0100 ACGCTTCTGTGTGATATGCTTCTTCGGGATTCTCCTACTGGGATTGTTACACAGAGTCCTAGTATAATGGACCTTGTAAAGTGTGATGGTGCGGGGCTCT Ruppia_tuberosa_TUA0114 ACGCTTCTGTGTGATATGCTTCTTAGGGATTCTCCTACTGGGATTGTTACACAGAGTCCTAGTATAATGGATCTTGTGAAGTGTGATGGTGCGGCGCTCT Ruppia_megacarpa_MED01 ACCCTTTTATGTGATATGCTTCTTCGTGATTCTCCTACTGGAATTGTTACACAAAGTCCGAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCACTCT Ruppia_maritima_UTA01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Ruppia_maritima_YHO01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCACTCT Ruppia_maritima_GRA01 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Potamogeton_maackianus_Pm052 ACCCTTTTGTGCGATATGATCCTTCGAGATTCACCTACTGGAATTGTCACACAAAGCCCTAGCATAATGGATCTTGTGAAGTGTGACGGCGCAGCGCTTT Ruppia_maritima_FAL0111 ACCCTTCTATGTGATATGCTTCTTCGGGATTCTCCTATTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCACTCT Ruppia_maritima_FAL0113 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGTGCGGCACTCT Ruppia_maritima_MAH02 ACCCTTCTATGTGATATGCTTCTTAGGGATTCTCCTACTGGAATTGTTACACAAAGTCCTAGTATAATGGACCTTGTGAAGTGTGATGGCGCGGCACTCT Ruppia_tuberosa_TUE0101 ATTATCATGGTAAGTATTGGCCACTCGGTGTTGCCCCTTCTGAGGAGAAGATTAAGGATATCATTGGCTGGTTGTTGACAAGTCATGGAGACTCCACGGG Ruppia_tuberosa_TUE0102 GTTATCATGGTAAGTATTGGCCACTCGGTGTTGCCCCTTCTGAGGAGAAGATTAAGGATATCATTGGCTGGTTGTTGACAAGTCACGGAGACTCCACGGG Ruppia_maritima_ANA01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_polycarpa_DEV01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_maritima_DUB0201 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCTTCCGAGGAAAAGATTAAAGATATTATTGGCTGGTTATTGGCAAGTCATGGAGACTCCACGGG Ruppia_maritima_DUB0202 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_polycarpa_POB01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCGTCTGAGGAAAAGATTAAAGATATTATTGGCTGGTTATTGGCAAGTCATGGAGACTCCACAGG Syringodium_isoetifolium_Sis03 ATTACCAGGGTAGTTATTGGCCACTTGGTGTTACTCCTTCTGAGGCAGAGATTAAGGATATTATTGGGTGGCTGTTGGAAAGTCATGGAGACTCCACAGG Ruppia_maritima_MAR01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_maritima_SKA0202 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCTTCCGAGGAAAAGATTAAAGATATTATTGGCTGGTTATTGGCAAGTCATGGAGACTCCACGGG Ruppia_tuberosa_TUA0100 GTTACCATGGGAAGTATTGGCCACTCGGTGTTGCCCCTTCTGAGGAGAAGATTAAGGATATTATTGGGTGGTTGTTGACGAGTCATGGAGACTCCACGGG Ruppia_tuberosa_TUA0114 ATTACCATGGTAAGTATTGGCCACTTGGGGTTGCCCCTTCTGAGGAGAAGATTAAGGATATTATTGGCTGGTTGTTGACGAGTCATGGAGACTCCACGGG Ruppia_megacarpa_MED01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCTTCTGAGGAAAAAATTAAAGATATCATTGGCTGGTTATTGGCAAGTCATGGAGACTCCACGGG Ruppia_maritima_UTA01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_maritima_YHO01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_maritima_GRA01 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Potamogeton_maackianus_Pm052 ATTACCATGGAAAGTATTGGCCACTAGGTGTAACTCCTTCAGAATCACAAATTAAGGATATCGTGGAATGGCTGTTGGCAACCCACGGAGACTCCACAGG Ruppia_maritima_FAL0111 ATTACCATGGTAAGTATTGGCCGCTCGGTGTTGCCCCGTCTGAGGAAAAGATTAAAGATATTATTGGCTGGTTATTGGCAAGTCATGGAGACTCCACGGG Ruppia_maritima_FAL0113 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGTTAACTCATGGAGACTCCACAGG Ruppia_maritima_MAH02 ATTACCATGGTAAGTATTGGCCACTCGGTGTTGCCCCCTCCGAGGAAAAGATTAAAGATATTATCGGCTGGTTATTGGCAACTCATGGAGACTCCACAGG Ruppia_tuberosa_TUE0101 GTTGAGCACAGACAGCTTGGCGGATGCTAGCTACCCTGGTGCTGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCGTATATCACCTCGAGAGAT Ruppia_tuberosa_TUE0102 GTTGAGCACAGACAGCTTGGCGGATGCTAGCTACCCTGGTGCTGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCGTATATCACCTCGAGAGAT Ruppia_maritima_ANA01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_polycarpa_DEV01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_DUB0201 CTTGAGCACGGACAGTTTGGCGGATGCTAGCTACCCGGCTGCCGCTTCACTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_DUB0202 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_polycarpa_POB01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Syringodium_isoetifolium_Sis03 CTTGAGCACAGACAGTTTGGCTGATGCTGGCTATCCAGGAATTGCTTCCTTTGGTGATGCAGTTTGTGGTATTGCGGTGGCCTACATCGCCCCAGGGGAC Ruppia_maritima_MAR01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_SKA0202 CTTGAGCACGGACAGTTTGGCGGATGCTAGCTACCCGGCTGCCGCTTCACTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_tuberosa_TUA0100 GTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCTGGTGCTGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCGTATATCACCACGAGAGAT Ruppia_tuberosa_TUA0114 GTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCTGGTGCTGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCGTATATCACCTCGAGAGAT Ruppia_megacarpa_MED01 CTTGAGCACAGATAGTTTGGCGGATGCTAGCTACCCAGGTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_UTA01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCGAGAGAT Ruppia_maritima_YHO01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_GRA01 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Potamogeton_maackianus_Pm052 CCTGAGCACAGATAGTTTGGCTGATGCCGGATACCCTAGTGCTGCATCACTTGGTGATGCTGTTTGTGGTATGGCTGTGGCTTACATCACATCAAGAGAT Ruppia_maritima_FAL0111 CTTGAGCACGGACAGTTTGGCGGATGCTAACTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCTGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_FAL0113 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCTCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_maritima_MAH02 CTTGAGCACAGACAGTTTGGCGGATGCTAGCTACCCAGCTGCCGCTTCCCTTGGGGATGCAGTTTGTGGCATGGCAGTGGCATATATCACCTCAAGAGAT Ruppia_tuberosa_TUE0101 TTTTTGTTTTGGTTTAGATCACATACTGCAAAAGAGGTAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGACGACGGACAGCGTATGCATCCCC Ruppia_tuberosa_TUE0102 TTTTTGTTTTGGTTTAGATCACATACTGCAAAAGAGATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGACGACGGACAGCGTATGCATCCCC Ruppia_maritima_ANA01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCAC Ruppia_polycarpa_DEV01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_maritima_DUB0201 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCGGAAGACAAGGACGATGGACAGCGTATGCATCCCC Ruppia_maritima_DUB0202 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_polycarpa_POB01 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAAATAAAGTGGGGTGGAGCTAAACATCACCCGGAAGACAAGGACGATGGACAGCGTATGCATCCCC Syringodium_isoetifolium_Sis03 TTCTTGTTTTGGTTCAGATCACATACAGAAAAAGAGATAAAATGGGGTGGTGCAAAGCACCATCCTGAAGACAAGGATGATGGGCAGCGTATGCACCCAC Ruppia_maritima_MAR01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_maritima_SKA0202 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCGGAAGACAAGGACGATGGACAGCGTATGCATCCCC Ruppia_tuberosa_TUA0100 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAGATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGACGACGGACAGCGTATGCATCCCC Ruppia_tuberosa_TUA0114 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAGGTAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGACGACGGACAGCGTATGCATCCCC Ruppia_megacarpa_MED01 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAAGACGATGGACAGCGTATGCATCCCC Ruppia_maritima_UTA01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_maritima_YHO01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_maritima_GRA01 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Potamogeton_maackianus_Pm052 TTCTTGTTTTGGTTTAGATCCCACACAGCTAAAGAGGTTAAGTGGGGTGGTGCAAAACATCACCCTGAAGACAAGGATGATGGGCAGCGGATGCATCCTC Ruppia_maritima_FAL0111 TTTTTGTTTTGGTTTAGATCCCATACTGCAAAAGAAATCAAGTGGGGTGGTGCTAAACATCATCCGGAAGACAAGGACGATGGACAGCGTATGCATCCCC Ruppia_maritima_FAL0113 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_maritima_MAH02 TTTTTGTTTTGGTTTAGATCCCACACTGCAAAAGAAATAAAGTGGGGTGGTGCTAAACATCATCCTGAAGACAAGGATGATGGACAGCGTATGCATCCCC Ruppia_tuberosa_TUE0101 GCACATCTTTTAACGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Ruppia_tuberosa_TUE0102 GCACATCTTTTAACGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Ruppia_maritima_ANA01 GCACGTCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_polycarpa_DEV01 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_DUB0201 GCACATCGTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_DUB0202 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_polycarpa_POB01 GCACATCTTTTAACGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Syringodium_isoetifolium_Sis03 GCACATCTTTCAATGCCTTCCTGGAAGTAGTGAAAAGTAGAAGCCTTCCA Ruppia_maritima_MAR01 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_SKA0202 GCACATCGTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_tuberosa_TUA0100 GCACATCTTTTAACGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Ruppia_tuberosa_TUA0114 GCGCATCTTTTAACGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Ruppia_megacarpa_MED01 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAAAGTAGGAGCCTTCCA Ruppia_maritima_UTA01 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_YHO01 GCACGTCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_GRA01 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Potamogeton_maackianus_Pm052 GGACATCTTTTAATGCTTTCCTCGAAGTAGTGAAAAGTGAGAGCCTTCCG Ruppia_maritima_FAL0111 GCACATCTTTTAATGCCTTCCTAGAAGTTGTGAAGAGTAGGAGCCTTCCG Ruppia_maritima_FAL0113 GCACATCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA Ruppia_maritima_MAH02 GCACGTCTTTTAATGCCTTCCTGGAAGTTGTGAAGAGTAGGAGCCTTCCA ; END; BEGIN TREES; Title RuppiaPhyB_38Fdw_ML_TB; LINK Taxa = Taxa; TRANSLATE 1 Ruppia_tuberosa_TUE0101, 2 Ruppia_tuberosa_TUE0102, 3 Ruppia_maritima_ANA01, 4 Ruppia_polycarpa_DEV01, 5 Ruppia_maritima_DUB0201, 6 Ruppia_maritima_DUB0202, 7 Ruppia_polycarpa_POB01, 8 Syringodium_isoetifolium_Sis03, 9 Ruppia_maritima_MAR01, 10 Ruppia_maritima_SKA0202, 11 Ruppia_tuberosa_TUA0100, 12 Ruppia_tuberosa_TUA0114, 13 Ruppia_megacarpa_MED01, 14 Ruppia_maritima_UTA01, 15 Ruppia_maritima_YHO01, 16 Ruppia_maritima_GRA01, 17 Potamogeton_maackianus_Pm052, 18 Ruppia_maritima_FAL0111, 19 Ruppia_maritima_FAL0113, 20 Ruppia_maritima_MAH02; TREE RuppiaPhyB_38Fdw_ML = ((8:0.1329,17:0.1526):0.03415,((((((((3:0.0010,15:0.0):0.0010,20:0.0):0.0019,(6:0.0010,(9:0.0,16:0.0010):0.0010):0.0010):0.0028,(4:0.0,14:0.0068,19:0.0058):0.0011):0.0121,((5:0.0030,10:0.0037):0.0135,18:0.0189):0.0039):0.0069,7:0.0144):0.0135,13:0.0133):0.0178,((11:0.0203,12:0.0112):0.0071,(1:0.0,2:0.0048):0.0114):0.0795):0.03415); END; BEGIN TREES; Title RuppiaPhyB_38Fdw_TB; LINK Taxa = Taxa; TRANSLATE 1 Ruppia_tuberosa_TUE0101, 2 Ruppia_tuberosa_TUE0102, 3 Ruppia_maritima_ANA01, 4 Ruppia_polycarpa_DEV01, 5 Ruppia_maritima_DUB0201, 6 Ruppia_maritima_DUB0202, 7 Ruppia_polycarpa_POB01, 8 Syringodium_isoetifolium_Sis03, 9 Ruppia_maritima_MAR01, 10 Ruppia_maritima_SKA0202, 11 Ruppia_tuberosa_TUA0100, 12 Ruppia_tuberosa_TUA0114, 13 Ruppia_megacarpa_MED01, 14 Ruppia_maritima_UTA01, 15 Ruppia_maritima_YHO01, 16 Ruppia_maritima_GRA01, 17 Potamogeton_maackianus_Pm052, 18 Ruppia_maritima_FAL0111, 19 Ruppia_maritima_FAL0113, 20 Ruppia_maritima_MAH02; TREE PAUP_1 = (((((((((3:1.0,15:0.0):1.0,20:0.0):2.0,(6:1.0,(9:0.0,16:1.0):1.0):1.0):3.0,((4:0.0,19:6.0):0.0,14:7.0):1.0):9.0,((5:4.0,10:3.0):14.0,18:17.0):6.0):9.0,7:12.0):15.0,13:13.0):20.0,((11:15.0,12:16.0):7.0,(1:1.0,2:4.0):17.0):63.0):27.5,(8:85.0,17:103.0):27.5); TREE PAUP_2 = ((((((((((3:1.0,15:0.0):1.0,20:0.0):2.0,(6:1.0,(9:0.0,16:1.0):1.0):1.0):4.0,(4:0.0,19:6.0):0.0):1.0,14:6.0):10.0,((5:4.0,10:3.0):13.0,18:18.0):6.0):8.0,7:12.0):15.0,13:13.0):20.0,((11:15.0,12:16.0):7.0,(1:1.0,2:4.0):17.0):63.0):27.5,(8:85.0,17:103.0):27.5); TREE PAUP_3 = (((((((((3:1.0,15:0.0):1.0,20:0.0):2.0,(6:1.0,(9:0.0,16:1.0):1.0):1.0):3.0,(4:0.0,14:7.0,19:6.0):1.0):9.0,((5:4.0,10:3.0):14.0,18:17.0):6.0):9.0,7:12.0):15.0,13:13.0):20.0,((11:15.0,12:16.0):7.0,(1:1.0,2:4.0):17.0):63.0):27.5,(8:85.0,17:103.0):27.5); TREE PAUP_4 = (1:1.0,2:4.0,((((((((((3:1.0,15:0.0):1.0,20:0.0):2.0,(6:1.0,(9:0.0,16:1.0):1.0):1.0):4.0,4:0.0,19:6.0):1.0,14:6.0):10.0,((5:4.0,10:3.0):13.0,18:18.0):6.0):8.0,7:12.0):15.0,13:13.0):20.0,(8:85.0,17:103.0):55.0):63.0,(11:15.0,12:16.0):7.0):17.0); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1050; END; begin paup; set autoclose = yes warnreset = no increase = auto; set criterion = likelihood; Lset Base = equal Nst = 2 TRatio = 2.3471 Rates = gamma Shape = 0.3583 Pinvar = 0; hsearch addseq = random nreps = 10; savetrees brlens = yes maxDecimals = 4 file = PhyBml.tre replace = yes; bootstrap nrep = 1000 treefile = PhyBmlBootstrap.tre search = heuristic / addseq = asis; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1050; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1050; END; BEGIN TREES; Title RuppiaPhyB_38Fdw_Bayes; LINK Taxa = Taxa; TRANSLATE 1 Ruppia_tuberosa_TUE0101, 2 Ruppia_tuberosa_TUE0102, 3 Ruppia_maritima_ANA01, 4 Ruppia_polycarpa_DEV01, 5 Ruppia_maritima_DUB0201, 6 Ruppia_maritima_DUB0202, 7 Ruppia_polycarpa_POB01, 8 Syringodium_isoetifolium_Sis03, 9 Ruppia_maritima_MAR01, 10 Ruppia_maritima_SKA0202, 11 Ruppia_tuberosa_TUA0100, 12 Ruppia_tuberosa_TUA0114, 13 Ruppia_megacarpa_MED01, 14 Ruppia_maritima_UTA01, 15 Ruppia_maritima_YHO01, 16 Ruppia_maritima_GRA01, 17 Potamogeton_maackianus_Pm052, 18 Ruppia_maritima_FAL0111, 19 Ruppia_maritima_FAL0113, 20 Ruppia_maritima_MAH02; TREE con_50_majrule = ((8:0.141469,17:0.160044)1.00:0.037196,((((((((3:0.002097,15:9.73E-4)0.98:0.00199,20:9.74E-4)1.00:0.003047,(6:0.00204,(9:9.41E-4,16:0.002007)0.97:0.001995)0.93:0.002042)1.00:0.004293,(4:0.00105,14:0.008044,19:0.007155)0.68:0.002361)1.00:0.014078,((5:0.004053,10:0.004939)1.00:0.015238,18:0.020757)0.86:0.00534)0.98:0.008339,7:0.016107)1.00:0.015315,13:0.01509)0.99:0.020081,((11:0.020435,12:0.013267)0.71:0.008528,1:0.016506,2:0.020951)1.00:0.083612)1.00:0.037196); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8963262504570424632; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5111952798356512867; checksumv 0 2 2401545465 null; endTell; getWindow; tell It; suppress; setResourcesState true false 328; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1070 580; setLocation 91 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;