#NEXUS [written Mon Dec 19 15:23:43 EST 2011 by Mesquite version 2.75 (build 564) at wpa032021.wireless.mcgill.ca/142.157.32.21] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=91; TAXLABELS Arabidopsis_thaliana_ARK1 Arabidopsis_thaliana_ARK3 Leavenworthia_alabamica_LaSRK30 Leavenworthia_alabamica_LaSRK34 Leavenworthia_alabamica_LaSRK47 Leavenworthia_alabamica_LaSRK1 Leavenworthia_alabamica_LaSRK49 Leavenworthia_alabamica_LaSRK10 Leavenworthia_stylosa_LsSRK04 Leavenworthia_alabamica_LaSRK40 Leavenworthia_stylosa_LsSRK09 Leavenworthia_exigua_LeSRK01a Leavenworthia_exigua_LeSRK01c Leavenworthia_exigua_LeSRK01b Leavenworthia_alabamica_LaSRK18 Leavenworthia_alabamica_LaSRK46 Leavenworthia_alabamica_LaSRK17 Leavenworthia_stylosa_LsSRK02 Leavenworthia_torulosa_LtSRK01a Leavenworthia_torulosa_LtSRK01d Leavenworthia_torulosa_LtSRK01c Leavenworthia_torulosa_LtSRK01b Leavenworthia_torulosa_LtSRK01e Leavenworthia_alabamica_LaSRK48 Leavenworthia_alabamica_LaSRK45 Leavenworthia_stylosa_LsSRK13 Leavenworthia_alabamica_LaSRK50 Leavenworthia_alabamica_LaSRK54 Leavenworthia_alabamica_LaSRK43 Leavenworthia_alabamica_LaSRK51 Leavenworthia_alabamica_LaSRK26 Leavenworthia_stylosa_LsSRK10 Leavenworthia_alabamica_LaSRK27 Leavenworthia_crassa_LcSRK09 Leavenworthia_stylosa_LsSRK01 Leavenworthia_alabamica_LaSRK22 Leavenworthia_crassa_LcSRK07 Leavenworthia_alabamica_LaSRK6 Leavenworthia_alabamica_LaSRK12 Leavenworthia_alabamica_LaSRK13 Leavenworthia_crassa_LcSRK06 Leavenworthia_stylosa_LsSRK12 Leavenworthia_alabamica_LaSRK31 Leavenworthia_alabamica_LaSRK44 Leavenworthia_alabamica_LaSRK37 Leavenworthia_alabamica_LaSRK11 Leavenworthia_alabamica_LaSRK15 Leavenworthia_crassa_LcSRK01 Leavenworthia_alabamica_LaSRK23 Leavenworthia_alabamica_LaSRKa2 Leavenworthia_alabamica_LaSRK32 Leavenworthia_stylosa_LsSRK03 Leavenworthia_alabamica_LaSRK14 Leavenworthia_alabamica_LaSRK35 Leavenworthia_alabamica_LaSRK28 Leavenworthia_alabamica_LaSRK29 Leavenworthia_crassa_LcSRK04 Leavenworthia_alabamica_LaSRK36 Leavenworthia_crassa_LcSRK10 Leavenworthia_crassa_LcSRK02 Leavenworthia_crassa_LcSRK05 Leavenworthia_stylosa_LsSRK08 Leavenworthia_alabamica_LaSRK16 Leavenworthia_crassa_LcSRK03 Leavenworthia_alabamica_LaSRK21 Leavenworthia_alabamica_LaSRK5 Leavenworthia_alabamica_LaSRK19 Leavenworthia_alabamica_LaSRK53 Leavenworthia_alabamica_LaSRK41 Leavenworthia_stylosa_LsSRK11 Leavenworthia_alabamica_LaSRK25 Leavenworthia_stylosa_LcSRK08 Leavenworthia_stylosa_LsSRK06 Leavenworthia_alabamica_LaSRKa4 Leavenworthia_alabamica_LaSRKr Leavenworthia_alabamica_LaSRKtu Leavenworthia_alabamica_LaSRK56 Leavenworthia_stylosa_LsSRK05 Leavenworthia_alabamica_LaSRK38 Leavenworthia_alabamica_LaSRK52 Leavenworthia_alabamica_LaSRK20 Leavenworthia_alabamica_LaSRK55 Leavenworthia_alabamica_LaSRK33 Leavenworthia_stylosa_LsSRK07 Leavenworthia_uniflora_LuSRK01a Leavenworthia_uniflora_LuSRK01c Leavenworthia_alabamica_LaSRK24 Leavenworthia_alabamica_LaSRK39 Leavenworthia_alabamica_LaSRK42 Leavenworthia_alabamica_LaSRK Leavenworthia_alabamica_LaSRKb ; END; BEGIN CHARACTERS; TITLE 'Matrix in file "FinalignPLUS2_ARK_LX.nex"'; DIMENSIONS NCHAR=335; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Arabidopsis_thaliana_ARK1 TTATACTCGAGATTATACTTAAACTCTGC-GGGTTTATTACAACGATTGACTTGGTTTGAGACAACAC-AGAGTTGGAAGCAACTATGGTACTCACCGAAGGAC------CTATGCGATAACTACAAAGTGTGCGGGAA---TTTCGGTTATTGCGAC----TCG--AACAGTTTACCAAATTGTTATTGTATCAAAGGGTTTAAGCCAGTGAATGAGCAAG------------CGTGGGACTTGAGAGATGGCTCCGCTGGTTGCATGAGGAAGACGAGGCTGAGCTGTGACGGTAGAGATGGTTTTACCCGGTTGAAGAGGATGAAATTGCCA Arabidopsis_thaliana_ARK3 GTTTACTCGAGATTAAGCATAAGCTCCAC-GGGATTGTTACAAAGATTCACTTGGATTGAGACAGCAC-AGAATTGGAACCAATTCTGGTACGCACCAAAAGAC------CAATGTGATGAGTACAAAGAGTGTGGTGT---TTACGGTTATTGCGAT----TCG--AACACTTCACCTGTTTGTAATTGTATTAAAGGGTTTAAGCCGAGGAATCCGCAAGT------------GTGGGGATTGAGAGACGGATCGGATGGTTGCGTGAGGAAGACGCTACTGAGCTGTGGTGGCGGAGATGGGTTTGTGCGGTTGAAGAAGATGAAATTGCCG Leavenworthia_alabamica_LaSRK30 TCTATATCGCTATTGCAAATGACGGCCGTTGGATC-ATTAGAGCTGTTTGGGTTTAT------AGGAGAGAAA-AGGCATTCTCTTTTTTATGTTCCCTACGACCT------CTGTGATTATTACAATGCGTGTGG---CGATAACAGTTACTGTAACTTCGTCATCAACAAAGGCAGGAACTGTGCATGTATAGCAGGGTTTCAGCCAGGTGGCCAGTATGCAA------------GGGGCTTGACAAAATCGGAGCCGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK34 TCTATTTGGCTATTGCAAATGACGTACGTTGGAAC-ATTGCGGATGATGGAGTTTAT------AGGAGGAGAA-GTGCAGACT---TCATATTTTGCAGAGGATTT------TTGTGATTTTTATAATAAGTGTGG---CGATAACAGTTACTGTA------------ACACAAGCAGGAGCTGTGTATGTATCGCAGGGTTTCAGCCAGGTGGCCAATATGCAA------------AGGGCTTGACAAAATCGAAGGCGAGATGTGTGAGGAAGTCGCAGTTGAGCTGCCAAGAAAAGGAG---TTTAAAAAGATAAGTAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK47 TCTATCTCACTATTGCAACTGACGTACGTTGGATT-ATTGGAGCTGATGGAGTTTAT------AGGAGGAGAA-ATTCATATTTTATTTAATTTTCCAGAGGACCT------CTGTGATTCTTACAATGTGTGTGG---CGATAACAGTTACTGTA------------ACACGAGCGGGAACTGTGTATGTATCGCAGGGTTTCAACCCGATGGCCAATATGCAG------------TGGGATTGACAAAATCAGAGCGGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTCAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK1 TTGTTCTCGCTATTGCGAATTACGTACACTGGAAT-ATTGCATTTGGTGGAGTTCAT------AGGAGGAGAA-ATGTATATTTTATTTTATTTGCCTGACGACAG------ATGTGATTTTTACAATGTTTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAGGAAATGTGAATGTATCGTAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGCTTGACAAAATCGGAACAGAGATGTGTGAGGAAATCACAATTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGTAATATAAAGCTGCCA Leavenworthia_alabamica_LaSRK49 TCTCTCTCGCTATTGCAAATGACGCACACTGGATC-ACTGGATCTGATGGAGTTGAT------AGGAGGAGAA-ATGAATATTTTATTTCAGTTTCCAGTAGACGA------CTGTGATTTTTACAATAGTTGTGG---CGGTAACAGTTACTGTAAC------------ACAAACAAGAAATGTGTTTGTATCGCAGGGTTTCAGTTGGGTGGCCAATATGCAG------------TGGGCATAACAAAATCGGAGCAGACATGTGTGAGGAAGTCACAATTGAACTGCCAGGAAAACGAG---TTTAAGAAGATAAAGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK10 TCTATGTCGTTAATGCAACTGACGTACACTGGATC-ACTGGAGCTGCTGGAGTTTAT------AGGAAGAGAA-AGGCAGAGTTTACTTTACTTTCCAAACGACAT------ATGTGATAGTTACAATAGGTGCGG---CGATAACACTTACTGTAAC------------ACAAGCAGGAAATGTGAATGTATCGCAGGGTTTCAGAGGGGTGGCCAGGATGCAG------------TGGGGTTGACAAAATGGGAGCAGAGATGTGTGAGAAAGTCACCCTTGAGCTGCAACAAAAATGAA---ATTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK04 TCTATGTCGTTAATGCAACTGACGTACACTGGAGT-ACTGGAGCTGATTGAGTTTAT------AGGAAGAGAA-AGGCAGAGTTTACTTTACTTTCCAGACAACAT------ATGTGATCGTTACAATAGGTGCGG---CGATAACACTTACTGTAAC------------ACAAGCAGGAAATGTGAATGTATCGCAGGGTTTCAGAGGGGTGGCCAGGATGCAA------------TGGGGTTGACAAAATGGGAGCAGAGATGTGTGAGAAAGTCACCCTTGAGCTGCAACAAAAATGAG---TTTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK40 TATATCTCGCTATTGCAAATGGCGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-AAGCAGAGATTATTTTATTTTCCTGTGGACGA------ATGTGATTATTACAATACGTGTGG---CGATAACAGGTACTGTAAC------------ACAAGCAGAAAATGTGAATGTATCGCAGGGTTTCAGTTGGGTGGCCAATACGCAG------------TGGGGTTGACAAAAGCGGAGCAGAGATGTGTGAGAAAGTCACAATTGAGCTGTCACGAAAAGGAG---TTTAAGAAGATAAGTAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK09 TATATCTCGCTATTGCAAATGGCGTACACTGGATC-ATTGCAGCTGACGGAGTTTAT------AGGAGGAGAA-AAGCAGAGATTATTTTATTTTCCAGTGGACGA------ATGTGATTATTACAATACGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAGAAAATGTGAATGTATCGCAGGGTTTCAGTTGGGTGGCCAATACGCAG------------TGGGGTTGACAAAAGCGGAGCAGAGATGTGTGAGAAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGAAATATGAAGCTGCCA Leavenworthia_exigua_LeSRK01a TCTATCTCGCTATTGCAAATGACGTACACTGGATC-ATTGCAGCTGCTGGAGTTTAA------AGAAGGAGAA-AGGAACATTTTATTTTACTTTCCAATGGACAG------CTGTGATTTTTACAATACGTGTGG---CGATAACAGTTATTGTAAC------------ACAAGCGAAAACTGTGTATGCATCGCAGGGTTTCAGTTGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAATAATATGAAGCTGCCA Leavenworthia_exigua_LeSRK01c TCTATCTCGCTATTGCAAATGACGTACACTGGATC-ATTGCAGCTGCTGGAGTTTAA------AGAAGGAGAA-AGGAACATTTTATTTTACTTTCCAATGGACAG------CTGTGATTTTTACAATACGTGTGG---CGATAACAGTTATTGTA?C------------ACAAGCGAAAACTGTGTATGCATCGCAGGGTTTCAGTTGGG?GGCCAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---?TTAAGAAGATAAATAATATGAAGCTGCCA Leavenworthia_exigua_LeSRK01b TCTATCTCGCTATTGCAAATGACGTACACTGGATC-ATTGCAGCTGCTGGAGTTTAA------AGAAGGAGAA-AGGAACATTTTATTTTACTTTCCAATGGACAG------CTGTGATTTTTACAATACGTGTGG---CGATAACAGTTATTGTAAC------------ACAAGCGAAAACTGTGTATGCATCGCAGGGTTTCAGTTGGGTGG?CAATATGCAG------------YGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAATTGAGCTGCCMCGAAAAGGAG---TTTAAGAAGATAAATAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK18 TCTATCTTGCTACTGCAAATGACTTACATTGGATC-ACTGCAGCTGCTGGAGTTTAT------AGAAGGAGAA-AGGCATATTTTAATATATTTTCCAATGGACGA------CTGTGATTTTTACAATTGGTGTGG---CCATAACAGTTACTGTAAC------------ACAAGCTGGAACTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGAGG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTAAGAGGATAAGGAATATAAAGCTGCCA Leavenworthia_alabamica_LaSRK46 TCTATCTCGCTGTTGCAAATGACGTACGCTGGATC-ATTGCAGCTGCTGGAGTTTAT------AGAAGGAGAA-ATGCGTACTTTCTTTTATTTTGCAACGGACCT------CTGTGATACTTACAATTGGTGTGG---CGATAACAGTTACTGTAGC------------ACAAGCAGGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCGCAATTAAGCTGCCACGAAAAGGAG---TTCAAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK17 TCTATCTCGATATTGCGAATGACGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-CGGCATACTACATTTTATTTTCCAGACGACAT------TTGTGATTTTTACAATTGGTGTGG---TAATAACAGTTACTGTAAC------------ACAAGCATCAACTGTGTATGTATCGCAGGGTTTCAGCCAGGTGGCCAATATGCAG------------AGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAGGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK02 TCTATCTGGCTATTGCGAATGTCGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-CGGCATACTTCAGTTTTTTTTTCGACGGATCT------CTGTGATTCTTACAATTGGTGTGG---CGATAACACTTACTGTAAC------------ACAAGCAAAAACTGTGAATGTCTCGCAGGGTTTCAGTTGGGTGGCCAATATGCGG------------TGGGGTTGACAAAATCGGAGCAAAGATGTGTGAGGAAATCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_torulosa_LtSRK01a TCTATCTCGCAATTGCGAATGTGGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-ATGCATACTAAATTTTTTTTGCCAGATAACAG------CTGTGATTTTTACAATACGTGTGG---CGATAATAGTTACTGTAAC------------ACAAGCAGGAACTGTGAATGTATCGCAGGCTTTCAGTG-------------------------------------------------------------AGGAAGTCACAGTTGAGCTGCTACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_torulosa_LtSRK01d TCTATCTCGCAATTGCGAATGTGGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-ATGCATACTAAATTTTTTTTGCCAGATAACAG------CTGTGATTTTTACAATACGTGTGG---CGATAATAGTTACTGTAAC------------ACAAGCAGGAACTGTGAATGTATCGCAGGCTTTCAGTGGGGT-------------------------------TGACAAAATCGAAGCGGAGATGTGTGAGGAAGTCACAGTTGAGCTGCTACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_torulosa_LtSRK01c TCTATCTCGCAATTGCGAATGTGGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-ATGCATACTAA?TTTTTTTTGCCAGATAACAG------CTGTGATTTTTACAATACGTGTGG---CGATAATAGTTACTGTAAC------------ACAAGCAGGAACTGTGAATGTA?CGCAGGCTTTCAGTGGGGT-------------------------------TGACAAAATCGAAGCGGAGATGTGTGAGGAAGTCACAGTTGAGCTGCTACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_torulosa_LtSRK01b TCTATCTCGCAATTGCGAATGTGG?ACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-ATGCATACTAAATTTTTTTTGCCAGATAACAG------CTGTGATTTTTACAATACGTGTGG---CGATAATAGTTACTGTAAC------------ACAAGCAGGAACTGTGAATGTATCGCAGGCTTTCAGTGGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAGCGGAGATGTG?GAGGAAGTCACAGTTGAGCTGCTACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_torulosa_LtSRK01e TCTATCTCGCAATTGCGAATGTGGTACACTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-ATGCATACTAAATTTTTTTTGCCAGATAACAG------CTGTGATTTTTACAATACGTGTGG---CGATAATAGTTACTGTAAC------------ACAAGCATGAACTGTGAATGTATCGCAGGCTTTCAGTGGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAGCGGAGATGTGTGAGGAAGTCACAGTTGAGCTGCTACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK48 TCTATCTCGCTATTGCAATTGACGTACACTGGATT-ATTGGAGATGCTGGAGTTTAT------AGGAGGAGAA-AGGCATTCCTTCTTTTTTTTCCCAGACGACAG------CTGTGATTTTTACAACACGTGTGG---CGATAACACTTACTGCAAC------------ACAAGCATGAACTGTGAATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAG------------TGGGATTGACAAAATCGAAGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTCAAGAAGATAAGTAATATGAAACTGCCA Leavenworthia_alabamica_LaSRK45 TCGATCCAGTTATTGCAAATGACGCACATTGGATC-ATTGATGCTGATGGAGTTAGT------AGGAGGAGAA-AGGCGTAGATTGTTTTATTTTCCAACGGACAC------CTGTGATGATTACAATTTTTGTGG---CGATAACAGTTACTGTAACTTCGTCCTCCCCACAGGCAGGAACTGTGCATGTATCGCAGGGTTTCAGCGGAGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAGCCGCCATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATGTGAAGCTGCCA Leavenworthia_stylosa_LsSRK13 TCGATCCAGTTATTGCAAATGACGCACATTGGATC-ATTGTTGCTGATGGAGTTAGT------AGGAGGAGAA-AGGCGTAGATTGTTTTATTTTCCAACGGACAC------CTGTGATGATTACAATTTTTGTGG---CGATAACAGTTACTGTAACTTCGTCCTCCCCACAGGCAGGAACTGTGCATGTATCGCAGGGTTTCAGCCCAGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAGCCGCCATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATGTGAAGCTGCCA Leavenworthia_alabamica_LaSRK50 TCTGTCTCGCTATTGCAAATGCCGTACACTGGATC-ATTGGAGCTGCTGGAGTTAAT------AGGAGGAGAA-AGGCATAGGTTATTTTATTTTCCAGAGGACAG------CTGTGATTATTACAATGTATGTGG---CGATAACGGTTACTGTAAC------------ACAAGCGGGAGCTGTGTATGCATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCAACGAAAAGGAG---TTTATGAAGATAAGGAATATGAAGCTCCCA Leavenworthia_alabamica_LaSRK54 TCTATCTCGCTATTGCAAATGACGTATGTAGGATC-ACTGGAGCTGTTGGAGTTAAT------AGGAGGAGAA-AGGCATAGGTTATTTTATTTTCCAGATGTCAA------TTGTGATTTTTACAATGTGTGTGG---CGATAACAGTTGCTGTAACTTCA------ACACAAGCAGGAATTGTACATGTATCGCAGGGTTTCAGTTGGGTGGCCAATATGAAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTATCAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTTCCA Leavenworthia_alabamica_LaSRK43 TCTATCTCGTTATTGCAAATGACGTACTTTGGATC-GTTGCAGCTGCTGGAGTTGAT------AGGAGGAGAA-ATGCGTACTTCATTTTATTTTCCTATGGAAAT------CTGTGATTCATACAATGCATGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAGCAACTGTGTATGTATCGCAGGGTTTCAACCGGGTGGCCAATATGCAC------------TGGGCTTGACAAAATCGAAGCCGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCAGGAAAAGGAG---TTTAAGAAGATAAGGAACATGAAGCTCCCA Leavenworthia_alabamica_LaSRK51 TCTATCTCGCTATTGCAAATGACGTACACTGGATC-ATTGCAGCTGATGGAGTTCAT------AGGAGGAGAA-ACGCATACGTTATTTTATTTTCCAAACGATAT------CTGTGATTTTTACAATACATGTGG---CGATAACACTTACTGTAAC------------ACAAGCTTGAACTGTGTATGTATCGCAGGGTTTCAACCCGGTGTCCAAAATACAG------------TGGGGTTGACAAAATCGAAGACGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGAAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK26 TCTATCTCGATATTGCAGTTGACGTACTTTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGTAGAA-AATCAGATATTATTTTATTTTCCAAAGAACGG------CTGTGATTCTTACAATAAGTGTGG---CGATAACACATACTGTAACTTCA------ACACAAGCAGCAACTGTACATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCCA------------TGGGGTTGACAAAATCGAAACAGAGATGTGTAAGGAAGTCACAATTGAGCTGCGACGAAAAGGAG---TTTAAGAAGTTAAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK10 TCTATCTTGATATTGCAGTTGACGCACTTTGGATC-ATTGCAACTGATGGAGTTTAT------AGGAGTAGAA-AATCAGATATTATTTTATTTTCCAAAGAACAG------CTGTGATTCTTACAATAAGTGTGG---CGATAACACATACTGTAACTTCA------ACACAAGCAGCAACTGTACATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCCG------------TGGGGTTGACAAAATCGAAACAGAGATGTGTGAGGAAGTCACAATTGAGCTGCGACGAAAAGGAG---TTTAAGAAGTTAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK27 TCTGTCTTGGTATTGCGATTGTGGTACATTGGAAC-ATTGCAGCTGTCGGAGTATGT------AGGAGAAGAA-ATACATACTTTGTTTTATTTTCCAAAGGACAC------ATGTGATTCTTACAATGCTTGTGG---CGACAACACTTACTGTAAC------------ACAAGCAGCAACTGTGAATGTATCGCAGGGTTTCAGCCTGGTGGCCAATATGCAA------------GAGGTTTGACAAAATCAAAGCCGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAGGGAG---TTTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK09 TCTGTCTTGGTATTGCGATTGTGGTACATTGGAAC-ATTGCAGCTGTCGGAGTATGT------AGGAGAAGAA-ATGCATACTTTGTTTTATTTGCCAAAGGACAC------ATGTGATTCTTACAATGCTTGTGG---CGACAACACTTACTGTAAC------------ACAACCAGCAACTGTGTATGTATCGCAGGGTTTCAGCCAGGTGGCCAGTATGCCA------------GAGGTTTGACAAAATCAAAGCCGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAGGGAG---TTTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK01 TCTATCTCGGTATTGCGATTGTGGTACATTGGAAC-ATTGCAGCTGTCGGAGTATGT------AGGAGAAGAA-ATACATACTTTGTTTTATTTTCCAAAGGACAC------ATGTGATTCTTACAATGCTTGTGG---CGACAACACTTACTGTAAC------------ACAAGCAGCAACTGTGTATGTATCGCAGGGTTTCAGCCAGGTGGCCAATATGCAA------------GAGGTTTGACAAAATCAAAGCCGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAGGGAG---TTTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK22 TCTATCTCGCTATTGCAAATGACTAACATCGGATC-ATTGCGGCTGGTGGAGTTAAT------AGGAGGAGAC-AGACATATTTTATATCAATTTCCAGCGGATTT------CTGTGATTTTTACAATAAGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAACAACTGTGTATGTATCGCAGGGTTTCAGCCGGATGGCCAAAATT---------------TGGGGTTGGCAAAATCGAAGCCGATATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTGAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK07 TCTATCTCGCTATTGCAAATGACTAACATCGGATC-ATTGCGGGTGGTGGAGTTAAT------AGGAGGAGAC-AGACATATTTTATATCAATTTCCAGCGGATTT------CTGTGATTTTTACAATAAGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAACAACTGTGTATGTATCGCAGGATTTCAGCCGGATGGCCAAAATT---------------TGGGGTTGGCAAAATCGAAGCCGATATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTGAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK6 GCAATCTCGCTATTGCGAATGACGTATACTGGATC-ATTGCGGCTGATGGAATATAT------AGGAGGAGAA-AGGCATATTTTATATGATTTTCCAGTGGACTT------CTGTGATTATTACAACAAGTGTGG---CGATAACAGTTACTGTAAT------------ACAAGCAACAACTGTGTATGCATCGCAGGGTTTAAGTGGGGTGGCCAATATGCAA------------TGAGGTTGACAAAATCGAAGCCGAGATGTGTGAGGAAGTCACAACTGAGCTGCCAAGAAAAGAAG---TTTAAGAAGATAAGCAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK12 TCTATCTCGCTATTGCAATTGACGTCCGGTGGAGC-ATTGCGGCTGATAGAGTTAAT------AGGAGGAGAA-AGTCATATTTTATTTTATTTTCCACTGGACCT------CTGTGATACTTACAATAAGTGTGG---CGATAACACTTACTGTAAC------------ACAAGCATGAACTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAAAATGAAG------------TGGGGTTGACAAAATCGAAGCCGAGATGTGTGAGGAAGTCACAATTGAGCTGCCACGAAAAGGAG---TTTAAGAAGGTAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK13 TCTATCTTGCTATTACAATTAACGCACTTTGGATC-ATTGCTGCTGACGGAGTTTAT------AGGAGGAGAA-AGACATACTTTATTTTTTTTTCCTAAGGACCT------CTGTGATACTTACAATCGGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGAATGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAGCCTAAATGTCTGAGGAAGTCACAATTGAGCTGTCATGAAAAGGAG---TTTAAGAAGATAAAGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK06 TCTATCTCGCTGTTGCAAATGACGTACGCTGGGTC-ATTGGAACTGCTGGAGTTAAT------AGGAGGAGAA-AGGCATAGATTATTTTATTTTCCAGATGACCT------ATGTGACTTTTACAATACGTGTGG---CGAGAACACTTACTGTAAC------------ACAAGCTGGAACTGTGTATGTATTGCAGGGTTTCAGCCGGGTGGCCAATATGCAT------------GGGAATTGACAAAATCGAAGCCGAGATGTCTGAGGAAATCACAATTGAGCTGCCGCGAAAAGGAG---TTTAAGAAGATGAGGAACATGAAGCTTCCA Leavenworthia_stylosa_LsSRK12 TCTATCTCGCTGTTGCAAATGACGTACGCTGGGTC-ATTGGAACTGCTGGAGTTAAT------AGGAGGAGAA-AGGCATAGATTATTTTATTTTCCAGATGACCT------ATGTGACTTTTACAATACGTGTGG---CGAGAACACTTACTGTAAT------------ACAAGCTGGAACTGTGTATGTATTGCAGGGTTTCAGCCGGGTGGCCAATATGCAT------------GGGAATTGACAAAATCGAAGCCGAGATGTCTGAGGAAATCACAATTGAGCTGCCGCGAAAAGGAG---TTTAAGAAGATGAGGAACATGAAGCTTCCA Leavenworthia_alabamica_LaSRK31 TCTATCTCGCTATTGCAATTGACGTACGTTGGGAT-ATTGGAGCTGCTGGAGTTTAT------AGGAGGAGAA-AGGCATTCTTTATTTTATTTTCCAAATGACAT------CTGTGATTTTTACAATACGTGTGG---CGATAACACTTACTGTAAC------------ACAAGCATAAACTGTGTATGTATAGCAGGGTTTCAGCCGGGTGGCCAATATGCAT------------GGGAATTGACAAAATCGAAGCCGAGATGTCTGAGGAAGTCACAATTGAGCTGCCGCGAAAAGGAG---TTTAAGAAGATGAGGAACATGAAGCTGCCA Leavenworthia_alabamica_LaSRK44 TCTATCTCGGTATTGCAAATGACGTACGCTGGAGC-ATTGCGGCTGATGGAGTTAAT------AGGAGGAGAA-AGGCATTTTTTATTTTATTTTCCAGTCGACAA------CTGTGACTATTACAATACGTGTGG---CGAAAACACTTACTGTAAC------------ACAAGCAGGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCTAAGCGGAGATGTCTGAGGAAGTCACAACTGAGCTGCCGCGAAAAGAAG---TTTAAGAAGATGAGGAATATGAAACTGCCA Leavenworthia_alabamica_LaSRK37 TCTATCTCGCTATTGCAAATGACATACGCTGGATC-ATTAGAGTTGATAGAGTTAAT------AGGTGGAGAA-AGGCATAGGTTATTTTATTTTCCACAGGACAT------CTGTGATACTTACAATACGTGTGG---CGATAACACTTACTGTAAC------------ACAAGCTGGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAGTATGCAG------------TGGGGTTAACAAAATCAAAACGGAGATGCCTGAGGAAGTCACAATTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK11 TCGATCTCGCTATTGCAAATGTCGTACACTGGATC-ATTGCAGCTGGTGGAGTTTAT------AGGAGGAGAA-AGACATATTTTATTTCATTTTCCAATGGACCT------CTGTGATTTTTACAATACATGTGG---CGATAACAGTTACTGTAACACA------------AGCAGGAGTTGTGCATGTATCTCAGGGTTTCAGCCGGGTGGCCAATATGAATATG------CATGGAGCATGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCGCGAAACGGAG---TTTAAGAAGATAAGGAATATGAAGCTACCA Leavenworthia_alabamica_LaSRK15 TCTATCTTGCTATTACAAATAACGTACGCTGGATC-ATTGCAGCTGGTGGAGTTTAT------AGGAGAAGAA-ATGCATTTTTTATTTATTTTTCCAAAGGACGA------CTGTGATACTTATAATGAGTGTGG---CAATAACAGTTACTGTAACTTGGT------CAACAACACAAGCTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGAATATG------CATGGAGAATGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCTCAGTTGAGCTGCCAGGAAAAGGAG---TTTAAGAATATAAGGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK01 TCCATTTCGCTATTGCAAATGACGTACTTTGGATC-TTTGCAGCTGTTGGAGTTTAT------AGGAGGAAAA-AGACATATTTTATTTAATTTTCCAGAGGACAT------CTGTGATGTTTACAATACGTGTGG---CGATAACACTTACTGTAACACA------------AGCTGGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGTCAATATGA-----------TGTGG-GCTTGACAAAGTCGAAGCGGATATGCGTGAGGAAATCACAGTTGAGCTGCCACGAAAAGGAG---TTTAGGAAGATAAGGGATATGAAGCTTCCA Leavenworthia_alabamica_LaSRK23 TCTATCTGGCTATTGCAAATGATGTATACTGGATC-ACTGCAGCTGCTGGAGTTTAT------AGGAGAAAAA-AGGCGTACTTTATTTGCTTTTCCAATAGAACT------CTGTGATTTTTACAATACCTGTGG---CGAGAACACTTACTGTAACACA------------AGCTGGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATG------------CATGGGAATTGACAAAATCGAAGCAGAGATGTGTGAGGCAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGTAATATAAAGCTGCCA Leavenworthia_alabamica_LaSRKa2 TCTATCTCGCTATTGCAAATGATGTACACTGGATC-ACTGCAGCTGTTGGAGTTTAT------AGGAGGAGAA-AGACATATTTTATTTCATTTTCCAGATGGCAC------CTGTGATTTTTACAATACGTGTGG---CTATAACACTTACTGTAACACA------------AGCAGCAACTGTGAATGTATCCCAGGGTTTCAGCCGGGTGGCCAGTACG------------CATGGGGCTTGACAAAATCGAAGCCGAGATGTGTGAGGAATTTACAGTTGAGCTGCCAAGAAAGAGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK32 TCTATCTCGCTATTGCAAATGACGTACATTGGATC-ATTGCAGCTGATGGAGTTTAT------AGGAGAAGAA-AAACATACTTTATTCGTTTTTCCGGAGGACAA------CTGTGATACTTACAATACGTGTGG---CGCTAACACTTACTGTAACACA------------AGCATGAACTGTGTGTGTATAGCAGGGTTTCAGCCGGGTAGCCAATATG------------CATGGGAATTAACAAAATCGAAGCCGAGTTGTCTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGAAG---TTTAAGAAAATAAGCAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK03 TTTATCTCGTTACTGCAAATGATGTCCGTTGGATC-ATTGCGGCTGCTAGAGTTTGT------AGGAGGAGAA-AGACATATTTTATTTCAGTTTCCAAACGACAA------CTGTGATACTTACAATGTGTGTGG---CGATAACACTTACTGTAACACA------------AGCATGAACTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGTCAATATG------------CATGGGAATTGACAAAATCCAAGCAGAGATGTTTGAGAAAGTCAGACTTGAGCTGCCGAGAAAAGGAG---TTTACGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK14 TCTATCTCGCTACTGCAATTGACGTACCTTGGAAC-TTTGGAGCTGCTGGAGCTTGT------AGGACAAGAA-AGGCATACTTTATTTTATTTTCCAGAGAACCT------CTGTGATTCTTACAATGCGTGTGG---CCCTAACAGCTACTGTAAAA------------CAAGCAGAGATTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAA------------GGGGCTTGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCC---TTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAACGAATACGAAACTGCCA Leavenworthia_alabamica_LaSRK35 TCTATCTCCCTATTGCAAATGACGTACATCGGATC-ATTGGAGCTGCTGGAGTTAAT------AGGAGGAGAA-AGGCATTCTTTATTTTATTTTCCAGACGACTT------CTGCGATGCTTACAATGAGTGTGG---CGTTAACAGTTACTGTAACATCGCCCGCAACACGAGCACGGAGTGTGTATGTATCGAAGGGTTTCAGCGGGGTGGCCAATATGCAA------------GGGGCTTGACAAAATCGAGGCAGGGATGTGCGAGAAAGTCC---TTTAGCTGCCAGGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK28 TCTATCTCGCTATTGCAATTGACGTACCTTGGATC-AGTGGAGTTGTTGGAGTTAAT------AGGAGGAGAA-AGGCATTCTTTACTTTTTTTCCCAGAGGACTT------CTGTGATACTTACAATGAGTGTGG---CGATAATAGATACTGCAACATCCCCAGAAACACAAGCAGGGAATGTCTATGTATCGCAGGGTTTGAGCCGGGTGACCAATATGCATATGAATATGCGTGGAGCATGACAAAATCGAGGACGGGATGTGTGAGGAATTCACAGTTGAGCTGCCAGGAAAAGGAG---TTTAAGAAGATGAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK29 TCTATCTCGCTATTGCAGATGACGTACACTGGATC-ATTGCAGTTGCTGGAGTTAAT------AGGAGGAGAA-ATGAAATTTTTATTTTATTTTCCTTTAGACTT------CTGTGACTATTACAATGTGTGTGG---CGATAACAGTTACTGTAACTACTCCATCAACACAAGCAGGGACTGTGGATGTATCGCAGGGTTTGAGCCGGGTGGCCAATATGCATATG------CATGGGGCATGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCC---TTGAGCTGCCAGGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK04 TCTATCTCGCTATTGCAAATGACGTCCGCTGGATC-ATTGGAGTTGCTGGAGTTAAT------AGGAGGAGAA-TTGCATTCTTTATTTTATTTTCCATTGAACTT------TTGTGATTTTTACAATGTGTGTGG---CGATAACAGTTACTGTAACTTCGGTATCAACAGAAGCAGGAACTGTACATGTATAGCAGGGTTTCAGCCTGGTGGCCAATATGCATATG------CATGGGGATTGACAAAATCGCAGCAGAGATGTGTGAGGAAGTCACAGTTAAGCTGCCAGGAAAAGGAG---TTTAAGAAGATAAGGAATACGAAGCTGCCA Leavenworthia_alabamica_LaSRK36 TCTATCTCGTTATTGCAATTGACGTCCGTGGGATC-ATTGCGGCTGACAGAGTTTAT------AGGAGGAGAA-AGGCATACTTTGTTTAATTTTCCAATGGACTT------CTGTGATTATTACAATGTGTGTGG---CGATAACAGTTACTGTAACTACGTCGTCAACACAAGCAGGGACTGTGGATGTATCGCAGGGTTTCAGCCGGGTGCCCAAAATGCATATG------CATGGGGCTTGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCC---TTTAGCTGCCACGAAAAAGAG---TTTAAGAAGATAATGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK10 TCTATCTCGTTATTGCAATTGACGTCCGTGGGATC-ATTGCGGCTGACAGAGTTTAT------AGGAGGAGGA-AGGCATACTTTGTTTAATTTTCCAATGGACTT------CTGTGATTATTACAATGTGTGTGG---CGATAACAGTTACTGTAACTACGTCGTCAACACAAGCAGGGACTGTGGATGTATCGCAGGGTTTCAGCCGGGTGCCCAAAATGCATATG------CATGGGGCTTGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCC---TTTAGCTGCCACGAAAAAGAG---TTTAAGAAGATAATGAATATGAAGTTGCCA Leavenworthia_crassa_LcSRK02 TCTATCTCGCTATTGCAACTGACGCACGCTGGAGC-ATTGCGGCTGATGGAGTTTAT------AGAAGGAGAA-AGGCATATCTTATTTTATTTTGACGTGGACTT------CTGTGATTTTTACAATGTGTGTGG---CGATAACAATTACTGTAATTTCGTCATCAACACTGGTGGCAACTGTGTATGTATCCCAGGGTTTCAGCAGGGTGGCCAATATGCATATG------CATGGGGCATGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCC---TTGAGCTGTCACGTAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_crassa_LcSRK05 TCTATCTCGCTATTGCAAATGACGTACACGGGATC-ATTGGAGCTGCTGGAGTTTAA------AGGAGGAGAA-AGGCATAGTTTATTTTATTTCCCAGTGGACCT------CTGTGATTCTTACAATGTGTGCGG---CGATAACAGTTACTGTAAC------------ACAAGCAGCAACTGTGCATGTATCTCAGGATTTCAGCCGGGTGGCCAGTATGCAA------------GGGGCTTGACGAAATCGAAGCTGATATGTGTGAGAAACTCACACTTGAGCTGCCGAGAAAAGGAG---TTCACGAAGATAGTGAATGTGAAGCTGCCA Leavenworthia_stylosa_LsSRK08 TCTATCTCGCTATTGCAAATGACGTACGCTGGATC-ATTGCAACTGCTGGAATTTAT------AGGAGGAGAA-AGGAATAGGTTATTTTATTTTCCATTGGACCT------CTGTGATACTTACAATGTGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCAGCAACTGTGTATGTATCGCAGGGTTTCAGCGGGGTGGCCAATATGCAC------------GTGACTTCACAAAATCGAAGCAGAGATGTGTGAGGAATTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGTTAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK16 TCTATCTCGCTATTGCGAATGTCGTACACTGGATC-ATTGCAGCTGCTGGAGTTTAT------AGGAGGAGAA-AGACATACTTTATTTTATTTTCCAGACGACAT------CTGTGATTTTTACAATACTTGTGG---CGACAATAGTTACTGTAACA------------CGAACAGGAAATGTGTATGTATGGCAGGGTTTCAGTTGGGTGGCCAGTATGCAA------------AGGCCTTGACAAAATCGAGACAAATATGTGTGAGGAAGTTACAGTTGAGCTGCCAGGAAAAGGAG---TTTAAGAAGAAAAGGAATATGAAGCTGCCT Leavenworthia_crassa_LcSRK03 TCTATCTCGCTATTGCAAATGACGTATACTGGATC-ACTGCAGCTGATGGAGTTTAT------AGGAGGAGAA-AGTCATAATCTATTTTATTTTCCAAACGACAG------CTGCGATTTTTACAATACGTGTGG---CAATAACAGTTACTGTAACA------------CAAGCGGGAATTGTGTATGTATCGCAGGGTTTCAGGGGGATGGCCAATATGCAC------------GGGGCTTGACAATATCGAGGCAGATATGTGTGAGGAAGTCACACTTGACCTGCCAGGAAAAGGAT---TTTAAGAAGATAATGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK21 TCTATCTCGCTATTGCGAATATCGTCCATTGGAAC-ATTGCGGCTATTGGCGTTTAT------AGGAGGGGAA-ATGCATATTTTATTTCATTTCCCAAGAGACGA------CTGTGATTTTTACAATACGTGTGG---CGAAAATAGTTACTGTAACA------------CAAGCGGGGACTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAT------------TGGGCTTGACAAAATCGAGGCAGAGATGTGTGAGGAAGTC---CTTGAGCTGTCAGGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK5 TCAATCTTGATATTGCGAATGTTGTACACTGGATC-ATTGGAACTGATGGAGTTTAT------TGGAGGAGAA-AGGCATACTTTATTTTATTTCCCAGTTGAAGA------GTGTGATTTTTACAATACGTGTGG---CGATAACAGTTACTGTAATA------------CAAACAGCAATTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAT------------GGGGCTTGACAAAATCGAGGCGGACATGTTTGAGGAAGTCACACTTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGTTAACGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK19 TCTATCTCGCTATTGCAAATAACGTCCACTGGATC-ATTGCAGTTGCTGGAGTTTAT------AGGAGAAGAA-AGGCATACTTTATTTTATTTGCCAGAAGACGA------CTGTGATTTTTACAATACGTGTGG---CGATAACAGTTACTGTAACA------------CAAGCGGGAACTGTCTATGTATCGCAGGATTTCAGTGGGGTGGCCAATATGCAA------------GTGGATTGACAAAATCAAGGCAGACATGTTTGAGGAAGTCACCTTTGAGCTGCAACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK53 TCTACCTCGCTATTGCAATTGACGTACACTGGATC-ATTGGACCTGCTCGAGTTAAT------AGGAGGAGAA-AGACATTCTTCAATCTTTTTCCCAGAAGACAG------CTGTGATCCTTACAATGTGTGTGG---CGGTAACAGTTACTGTAACTTCC---TCAGCCCAGGCAGGAACTGTGTATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAA------------GTGGATTGACAAAATCGAGGCAGACATGTTTGAGGAAGTCACGTTTGAGCTGCCGCGAAAAGGAG---TTTAAGAAGATAACGAATATGAAACTGCCA Leavenworthia_alabamica_LaSRK41 TCTATCTCGCTATTGCAAATGACGTACATCGGATC-ACTGCAGCTGCTGAAGTTTAT------AGAAGGGAAA-AGGCATATTTTATTTTATTTTCCAAGTGACAC------TTGTGATCCTTACAATTCATGTGG---CGGTAACAGTTATTGTAACTACGGCATCAACGGAAGCAGGAACTGTGTTTGTATCCCAGGGTTTCAGTGGGGTGGCCAGTATGCAT------------GGGAATTGACAAAATCGAGGCCAACATGCTTGAGGAAGTCAAGCTTGAGTTGCCGCGAGAAGGAG---TTTAAGAAGACAATGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK11 TCTATATCGCTATTGCAAATGACGTACATTGGATC-ACTGCAGCTGCTAAAGTTTAT------AGAAGGAAAA-AGGCATGTTTTATTTTATTTTCCAATGGACAG------TTGTGATCCTTACAATTCATGTGG---CGGTAACAGTTATTGTAACTACGGCATCAACGCAAGCAGGAACTGTGTATGTATCCCAGGGTTTCAGTGGGGTGGCCAGTATGCAT------------GGGAATTGACAAAATCGAGGCCAACATGCTTGAGGAAGTCGAGCTTGAGTTGCCGCGAGAAGGAG---TTTAAGAAGACAATGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK25 TCTATCTCGCTATTACAAATAACGTCCGCTGGATC-ATTACATCTGATAGGGTTTAC------AGGAGGAGAA-CTGCATACTTTATTTGCTTATCCAAGGAACAT------CTGTGATTTTTACAATACGTGTGG---CGCTAACAGTAACTGTAAC------------ACAAGCATGAACTGTGAATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAC------------GGGGATTGACAAAAACGAGGCAGAATTGTGTGAGGAAGTCACAACTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LcSRK08 TCTATCTCGCTATTACAAATAACGTCCGCTGGATC-ATTACATCTGATAGGGTTTAC------AGGAGGAGAA-CTGCATACTTTATTTGCTTATCCAAGGAACAT------CTGTGATTTTTACAATACGTGTGG---CGCCAACAGTAACTGTAAC------------GCAAGCATGAACTGTGAATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAC------------GGGGATTGACAAAAACGAGGCAGAATTGTGTGAGGAAGTCACAACTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK06 TCTATCTCGCTATTACAAATAACGTCCGCTGGATC-ATTACAGCTGATAGGGTTTAT------AGGAGGAGAA-GTGCATACTTTATTTTCGTATCCAAGGAACAT------CTGTGATTTTTACAATACGTGTGG---CGCTAACAGTAACTGTAAC------------ACAAGCATGAACTGTGAATGTATCGCAGGGTTTCAGTGGGGTGGCCAATATGCAC------------GGGGATTGACAAAAACGAGGCAGAATTGTGTGAGGAAGTCACAACTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATAAGTAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRKa4 TCTATCTCGATATTGCAACTGACGTCCGCTGGAGC-ATTGCGGCTGACGGAGTTAAT------AGGAGGAGAA-AAACGTACTTTATTTTATTTTCCAAACGACAG------GTGTGATTATTACAATTCGTGTGG---CGAAAACAGTTACTGTAAC------------ACAAGCAACAACTGTGAATGTATGGCAGGGTTTCAGTGGGGTGGCCAATATGCAT------------GGGGCTTGACAAAATCGAGGCAGATTTGTGTGAGAAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRKr TCTATCTCGATATTGCAACTGACGTCCGCTGGAGC-ATTGCGGCTGACGGAGTTAAT------AGGAGGAGAA-AAACGTACTTTATTTTATTTTCCAAACGACAG------GTGTGATTATTACAATTCGTGTGG---CGAAAACAGTTACTGTAAC------------ACAAGCAACAACTGTGAATGTATGGCAGGGTTTCAGTGGGGTGGCCAATATGCAT------------GGGGCTTGACAAAATCGAGGCAGATTTGTGTGAGAAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRKtu TCTATCTCGATATTGCAACTGACGTCCGCTGGAGC-ATTGCGGCTGACGGAGTTAAT------AGGAGGAGAA-AAACGTACTTTATTTTATTTTCCAAACGACAG------GTGTGATTATTACAATTCGTGTGG---CGAAAACAGTTACTGTAAC------------ACAAGCAACAACTGTGAATGTATGGCAGGGTTTCAGTGGGGTGGCCAATATGCAT------------GGGGCTTGACAAAATCGAGGCAGATTTGTGTGAGAAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAAAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK56 TCTATCTCGATATTGCAAATAACGTCCGTTGGAGC-GTTACGGCTGATGGAGTTAAT------AGGAGGAGAA-ATGCATACTTTATTTTATTTTCCAGGGGACAT------CTGTGATTTTTACAATACGTGTGG---CGATAACAGTTACTGTAAC------------ACAACCAGAGACTGTGAATGTATCGCAGGGTTTCAGCCAGGTGGCCAATATGCAT------------GGGGCTTAACAAAATCTAAGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCAGGAAAAGGAG---TTTAAGAATATAAGGAATATGAAGCTGCCA Leavenworthia_stylosa_LsSRK05 TCTATCTCGCTATTGCAAATGACGTACACTGGATT-GTTAGAGCTAATGGAGTTAAC------AGGAGGAGAA-AAGCATACTTTATTTTTGTTTCCAGAGGACAA------ATGCGATATTTACAATATGTGTGA---CGATAACAGTTACTGTAAC------------ACAAGCGAGAACTGTGTATGTATCGCAGGGTTTCAGCCCGGTGGACAATATGCAA------------GGAGCTTGACAAAATCGAAGCAGAGATGTGTGAGGAAGTCACAGTTAAGCTGCCTTGAAAATGAG---TTTAAGAAGATAAGGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK38 TCTATCTCGCTATTGCAATTGACGTTCCCTGGAGC-ATTGCGGCTGATAGAGTTAAA------AGGAGGAGAA-AGGCATTTTTTATTTTATTTTCCAGTGGACAG------CTGTGATTTTTACAATAAGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCGGGAACTGTGTATGTATCGCAGGGTTTCAGCCCGGTGGCCAATATGCAA------------TGGGGTTGACAAAATCGGAGCAAAAATGTGTGAGGAAGTCACAGTTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGATAAAGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK52 TCTATCTCGCTATTGCAATTGACGTCCATTGGAGC-ATTGCGGCTGATGGAGTTAAT------AGGAGGAGAA-AGTTATATTTTATTTTATTTTCCAGATGACAA------CTGTGATTTTTACAATAAGTGTGG---CGATAACAGTTACTGTAAC------------ACAAGCGGGAACTGTGTATGTATCGCAGGGTTTCAGCCCGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGATAAAGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK20 TCTATCTCGCTGTTGCAATTGACGTCCGTTGGATC-ATTGCGGCTGCTAGAGTTCAT------AGGAGGAGAA-ATGCATATTTTATTTCAGTTTCCAAAGGACGA------CTGTGATGATTACAATACCTGCGG---CGATAACAGTTACTGTAAC------------ATAAGCGGGAAGTGTGTATGTATCGCAGGGTTTCAGCCCGGTGGCCAATATGCAA------------TGGGGTTGACAAAATCGGAGCAAAGATGTGTGAGGAAGTCACAGTTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGATAAAGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK55 TCTATCTCGCTATTGCAATTGACTTCCACTGGAGC-ATTGCGGCTGATGGAGTTAAT------AGGAAGAGAA-AGGCATATTTTATTTTATTTTCCCGAGGACAT------CTGTGATTTTTACAATACATGTGG---CGATAACACCTACTGTAAC------------ACAAGCAGGAAGTGTGAATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TCGGTTTGACAAAATCGAAGCAGAGATGTGTAAGGAAGTCACAGTTGAGCTGCCAGGAAAAGGAA---TTTAAAAAGATAATGAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK33 TCTACCTCGCTATTGCAATTGACGACCGCTGGAAC-ATTGCAATTGACAGAGTTTAT------AGGAGGAGAA-AGACATTTTTTATTTCTATTTCCACTGGACAG------GTGTGATTTTTACAATAAGTGTGG---CGAAAACAGCTACTGTATC------------ACAAATGAGACCTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAACCGAGATGTCTGAGGAAGTCAAACTTGAGCTGCCTCGAAAAGGAG---TTTAAGAAGATAAGGAATGTGAAGCTTCCA Leavenworthia_stylosa_LsSRK07 TCTATCTCGCTATTGCAATTGACGACCGCTGGAAC-ATTGCAACTGACAGAGTTTAT------AGGAGGAGAT-AGACATTTCTTATTTCAATTTCCATTGGACAG------GTGTGATTTTTACAATAAGTGTGG---CGAAAACAGCTACTGTATC------------ACAAATGAGACCTGTGTATGTATCGCAGGGTTTCAGCCGGGTGGCCAATATGCAG------------TGGGGTTGACAAAATCGAAACCGAGATGTCTGAGGAAGTCAAACTTGAGCTGCCTCGAAAAGGAG---TTTAAGAAGATAAGGAATATGAAGCTTCCA Leavenworthia_uniflora_LuSRK01a TCTATATCTCTATTGAAGTTGACGAACGTTGGATC-ATTGCAGCTAATGGAGTTTAT------AGGAGGAGAC-ATGAATACTATACTTTATCTTCCACACGATAT------CTGTGATTTATACAATACTTCTGG---GGATAATAGGTATTGTGAC------------ATAATTAAGAAGTGTGAATGTATCGAAGGGTTT?AGTTGGGTGACATA??TGCAT------------GGGACTTAA?AAAATCGAACCGGAGATGTGTGAGGAAGTCAAACTTGACTTGTCATGAAAAGGAG---TTTATAAA?ATAAAGA?C?TG?AGGTTC-A Leavenworthia_uniflora_LuSRK01c TCTATATCTCTATTGAAGTTGACGAACGTTGGATC-ATTGCAGCTAATGGAGTTTAT------AGGAGGAGAC-ATGAATACTATACTTTATCTTTCACACGATAT------CTGTGATTT-TACAATACTTGTGG---TGATAATAGGTATTGTGAC------------ATAATTAAGAAGTGTGAATGTATCGAAGGGTTTAAGTTGGATGACATAAATGCAT------------GGGACTTAACAAAATCGAACCGGAGATGTGTGAGGAAGTCAAACTTGACTTGTCATGAAAAGGAG---TTTATAAAGATAAAGAACATGAATTCACTA Leavenworthia_alabamica_LaSRK24 TCTATCTCGCTATTGCGAATGAATTCCTTTGGAGC-ATTGCGGCTGACGGAGTTTAT------AGGAGGAGAA-AGGCATATTTTATTTCATTTTCCAGACGACAT------GTGTGATCCTTACAATACGTGTGG---CGATAACAGTTACTGTAAC------------ACTAGTGGAAAATGTGTATGTCTCGCAGGATTTAAGTGGGGTGGCGAATATGCAG------------TGGGGTTGACAAAATCGGAGCAGAGATGTGTGAGGAAGTCACAATTGAGCTGCCAAGAAAAGGAG---TTTAAGAAGATAAGTAATATGAAGCTGCCA Leavenworthia_alabamica_LaSRK39 TCTATCTCGCTATTGCGAATGAATTCTGCCGGATC-ATTGCAGCTGATAGAGTTTAT------AGGAGGAGAA-AGACATTTTTTATTTCATTTTCCAAACGACCT------CTGTGATTATTACAATGTGTGTGG---CGAAAACAGTTACTGTAAC------------ACAAGCATGAAGTGTGTATGTCTCGCAGGGTTTCAGTGGGGTGGCCAATATTCAA------------GGGGCTTGACAAAATCGAGGCAGAGATGTGTGAGGAAGTCACAGTTGAGCTGCCACGAAAAGGAG---TTTAAGAAGATCAGGAATATGAAGTTGCCA Leavenworthia_alabamica_LaSRK42 TCTATCTCGCTATTGCAAATGAATTCTGCTGGATC-ATTGCGGCTGACCGAGTTTAT------AGGAGAAGAA-AGGCATATTTTATTTCATTTTCCAGAGGACAT------CTGTGATAAGTACAATGTTTGTGG---CGATAACAGGTACTGTAAAATCCCCAGAAACACAAGCAGGGAGTGTGTATGTATTGCAGGGTTTCGGCCCGGTAACCAGTATGCATATGAATATGCATGGGGCTTGACAAAATCGAGAGAGGGATGTGTGAGGAAGGCACATTTGAGCTGCCATGAAAAAGAG---TTTAAGAAATTAAGAAATATGAAGCTTCCA Leavenworthia_alabamica_LaSRK CGCTACTCGAGATTGGTATTAAATTCCGAAGGGTC-ACTACAGCGATTTACATGGAGT---AATCAAGAAGGA-TGGAACTTGTACTCATCGCTTTTACCGAAGGA---TAAGTGTGATACGTTTCAAATTTGTGG---TCCTTACGCTTACTGTGACATG------AACACATCGCCAATGTGTAACTGTATTAAAGGGTTTTTACCGAATAACTCGGAAAAGT------------GGGAGTCGGGAAACCCATCGGATAGATGTCAACGAAAGACGCAGTTGACCTGTGGCGGAGATGAT---TTTGTACAGCTGAGCAACATGAAGTTGCCC Leavenworthia_alabamica_LaSRKb CGCTACTCCAGACTGATATTAAATTCTGACGGG-ATTTTACAGCGATTTACATGGAGTAA-TCAAGATG-GA--TGGAACATGTACTCGTCTATACCAAAGGACAAA------TGTGACATTTATCAACTTTGTGG---CCCTTACGCTTACTGTGACATG------AACACATCGCCAATGTGTAACTGTATCGAAGGGTTT--------GTACC-GAATAACTCGGAAAA---GTGGGAGTCGGGAAACCCGTCGGATAGATGTCAACGAAAGATGCAGTTGACCTGCGGCGGAGATAA---TTTTGTACAGCTGAGTAACATGAAGTTGCCG ; END; BEGIN TREES; Title 'Trees from "FinalignPLUS2_ARK_LX.nex"'; LINK Taxa = Taxa; TRANSLATE 1 Arabidopsis_thaliana_ARK1, 2 Arabidopsis_thaliana_ARK3, 3 Leavenworthia_alabamica_LaSRK30, 4 Leavenworthia_alabamica_LaSRK34, 5 Leavenworthia_alabamica_LaSRK47, 6 Leavenworthia_alabamica_LaSRK1, 7 Leavenworthia_alabamica_LaSRK49, 8 Leavenworthia_alabamica_LaSRK10, 9 Leavenworthia_stylosa_LsSRK04, 10 Leavenworthia_alabamica_LaSRK40, 11 Leavenworthia_stylosa_LsSRK09, 12 Leavenworthia_exigua_LeSRK01a, 13 Leavenworthia_exigua_LeSRK01c, 14 Leavenworthia_exigua_LeSRK01b, 15 Leavenworthia_alabamica_LaSRK18, 16 Leavenworthia_alabamica_LaSRK46, 17 Leavenworthia_alabamica_LaSRK17, 18 Leavenworthia_stylosa_LsSRK02, 19 Leavenworthia_torulosa_LtSRK01a, 20 Leavenworthia_torulosa_LtSRK01d, 21 Leavenworthia_torulosa_LtSRK01c, 22 Leavenworthia_torulosa_LtSRK01b, 23 Leavenworthia_torulosa_LtSRK01e, 24 Leavenworthia_alabamica_LaSRK48, 25 Leavenworthia_alabamica_LaSRK45, 26 Leavenworthia_stylosa_LsSRK13, 27 Leavenworthia_alabamica_LaSRK50, 28 Leavenworthia_alabamica_LaSRK54, 29 Leavenworthia_alabamica_LaSRK43, 30 Leavenworthia_alabamica_LaSRK51, 31 Leavenworthia_alabamica_LaSRK26, 32 Leavenworthia_stylosa_LsSRK10, 33 Leavenworthia_alabamica_LaSRK27, 34 Leavenworthia_crassa_LcSRK09, 35 Leavenworthia_stylosa_LsSRK01, 36 Leavenworthia_alabamica_LaSRK22, 37 Leavenworthia_crassa_LcSRK07, 38 Leavenworthia_alabamica_LaSRK6, 39 Leavenworthia_alabamica_LaSRK12, 40 Leavenworthia_alabamica_LaSRK13, 41 Leavenworthia_crassa_LcSRK06, 42 Leavenworthia_stylosa_LsSRK12, 43 Leavenworthia_alabamica_LaSRK31, 44 Leavenworthia_alabamica_LaSRK44, 45 Leavenworthia_alabamica_LaSRK37, 46 Leavenworthia_alabamica_LaSRK11, 47 Leavenworthia_alabamica_LaSRK15, 48 Leavenworthia_crassa_LcSRK01, 49 Leavenworthia_alabamica_LaSRK23, 50 Leavenworthia_alabamica_LaSRKa2, 51 Leavenworthia_alabamica_LaSRK32, 52 Leavenworthia_stylosa_LsSRK03, 53 Leavenworthia_alabamica_LaSRK14, 54 Leavenworthia_alabamica_LaSRK35, 55 Leavenworthia_alabamica_LaSRK28, 56 Leavenworthia_alabamica_LaSRK29, 57 Leavenworthia_crassa_LcSRK04, 58 Leavenworthia_alabamica_LaSRK36, 59 Leavenworthia_crassa_LcSRK10, 60 Leavenworthia_crassa_LcSRK02, 61 Leavenworthia_crassa_LcSRK05, 62 Leavenworthia_stylosa_LsSRK08, 63 Leavenworthia_alabamica_LaSRK16, 64 Leavenworthia_crassa_LcSRK03, 65 Leavenworthia_alabamica_LaSRK21, 66 Leavenworthia_alabamica_LaSRK5, 67 Leavenworthia_alabamica_LaSRK19, 68 Leavenworthia_alabamica_LaSRK53, 69 Leavenworthia_alabamica_LaSRK41, 70 Leavenworthia_stylosa_LsSRK11, 71 Leavenworthia_alabamica_LaSRK25, 72 Leavenworthia_stylosa_LcSRK08, 73 Leavenworthia_stylosa_LsSRK06, 74 Leavenworthia_alabamica_LaSRKa4, 75 Leavenworthia_alabamica_LaSRKr, 76 Leavenworthia_alabamica_LaSRKtu, 77 Leavenworthia_alabamica_LaSRK56, 78 Leavenworthia_stylosa_LsSRK05, 79 Leavenworthia_alabamica_LaSRK38, 80 Leavenworthia_alabamica_LaSRK52, 81 Leavenworthia_alabamica_LaSRK20, 82 Leavenworthia_alabamica_LaSRK55, 83 Leavenworthia_alabamica_LaSRK33, 84 Leavenworthia_stylosa_LsSRK07, 85 Leavenworthia_uniflora_LuSRK01a, 86 Leavenworthia_uniflora_LuSRK01c, 87 Leavenworthia_alabamica_LaSRK24, 88 Leavenworthia_alabamica_LaSRK39, 89 Leavenworthia_alabamica_LaSRK42, 90 Leavenworthia_alabamica_LaSRK, 91 Leavenworthia_alabamica_LaSRKb; TREE one = (1:0.181247,(2:0.065922,((90:0.202414,91:0.125546)1.00:0.35652,(43:0.032916,(41:0.004947,42:0.009683)1.00:0.081941,(51:0.114053,52:0.161368,(49:0.123193,(4:0.148133,29:0.123961,46:0.099683,47:0.16481,48:0.123188,56:0.099153,60:0.124559,63:0.121958,64:0.108506,65:0.136343,77:0.098038,78:0.142046,88:0.11307,(3:0.150209,57:0.093249)0.93:0.036556,(58:0.004663,59:0.01363)1.00:0.107623,(61:0.149336,62:0.083657)0.54:0.01974,(85:0.019811,86:0.031748)1.00:0.363292,(73:0.016315,(71:0.004804,72:0.014321)1.00:0.0236)1.00:0.125311,(74:0.004739,75:0.004582,76:0.004661)1.00:0.117515,(50:0.096804,(35:0.0051,(33:0.014221,34:0.030136)0.99:0.014785)1.00:0.153335)0.66:0.021947,(53:0.148038,(54:0.102815,(55:0.128712,89:0.185608)0.57:0.03216)0.62:0.033759)0.51:0.034315,(66:0.135158,(67:0.08047,(68:0.139102,(69:0.035975,70:0.027595)1.00:0.1656)0.79:0.038755)0.76:0.023766)0.75:0.024382,(6:0.16148,7:0.152161,15:0.104755,30:0.088889,39:0.089649,40:0.134555,44:0.099741,45:0.116205,82:0.086966,87:0.141886,(25:0.012634,26:0.011478)1.00:0.161298,(27:0.072712,28:0.104002)0.96:0.038704,(31:0.017281,32:0.019478)1.00:0.135462,(83:0.027703,84:0.016581)1.00:0.168804,(12:0.004789,13:0.004923,14:0.004627)1.00:0.070805,(38:0.133954,(36:0.004924,37:0.014618)1.00:0.121205)0.62:0.032371,(80:0.024799,(79:0.04565,81:0.10484)0.84:0.019098)0.98:0.033837,((5:0.111617,16:0.086676)0.79:0.025204,(17:0.067925,18:0.112706)0.95:0.027155)0.51:0.015393,((8:0.026274,9:0.033315)1.00:0.177397,(10:0.022929,11:0.011024)1.00:0.069204)0.71:0.032554,(24:0.106952,(19:0.005719,20:0.005118,21:0.005125,22:0.004913,23:0.00944)1.00:0.084738)0.69:0.023118)0.53:0.021281)0.56:0.019959)0.54:0.022727)0.73:0.049137)1.00:1.020136)1.00:0.451712):0.181247)[% ] [% ] [% setBetweenBits = selected ]; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 335; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 335; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 335; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1324326224061; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2266318601750404216; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8756179111153199944; mqVersion 275; checksumv 0 3 2460923126 null getNumChars 335 numChars 335 getNumTaxa 91 numTaxa 91 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 595838.0 sumSquares -1.3835058055281723E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1113 716; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8756179111153199944 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;