NEXUS
[File created by TreeBASE:  7/26/07  21:01:47]
[Matrix accession#: M1360]

BEGIN TAXA;
	TITLE M1360;
	DIMENSIONS  NTAX=37;
	TAXLABELS
		Colpoma_quercinum	Tryblidiopsis_pinastri	Lirula_macrospora	Terriera_2	Terriera_1	Lophodermium_picea	Lophodermium_actinothyrium1	Lophodermium_agathidis_2	Lophodermium_agathidis	Lophodermium_baculiferum_2	Lophodermium_sp_5	Lophodermium_molitoris	Lophodermium_baculiferum_3	Lophodermium_baculiferum_4	Lophodermium_baculiferum	Leptostroma_decipiens_2	Leptostroma_decipiens	Lophodermium_nitens	Lophodermium_nitens_BRMC17M	Lophodermium_nitens_NS4	Meloderma_desmazieri_CBS	Leptostroma_sp	Lophodermium_sp_4	Lophodermium_pinastri_2	Lophodermium_pinastri	Elytroderma_deformans	Lophodermium_seditiosum	Lophodermium_sp_3	Lophodermium_australe_2	Lophodermium_australe	Lophodermium_conigenum_2	Lophodermium_conigenum	Meloderma_desmazieri_MD3	Lophodermium_sp2	Lophodermium_sp._1	Lophodermium_indianum	Lophodermium_indianum_2
	;
END;

BEGIN CHARACTERS;
	TITLE M1360;
	DIMENSIONS NCHAR=484;
	FORMAT MISSING = - GAP = " DATATYPE = DNA ;
	MATRIX
		Colpoma_quercinum                 AAGAA-TA-CA-GGC-TTCGCGGCCGCT-ATTCTCCTTCTT-TGTATACC-AAACT-TTGTTGCTTTGGCAGGCCCCTGGC--TTCG---GCTGGATAGCGCCTGCCAGAGGACC-AAAACCCTTGAATCTTTGCCGTCTGAGT-ATTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCTCCCTGGTATTCCGGGGAGCATGCCTGTTCGAGCGTCATTACAACCCTCACGCCCAGCGTGGTATTGGGCT-CGCCCTG-T------AGGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCCT-AAGCGTAGTAA-TACTCGTCGCTT-TTGGGCTTGGGCGGGC--GCTCGCT---AGCAACCCCC-AC-CATT--AAAGG
		Tryblidiopsis_pinastri            AAGAA-TATC--GGCC-TCACGGCC-CT-GTTCTCACCCAA-TGTATACC-CAACTCTTGTTGCTTTGGCAGGCCCCTGGC--TCCG---GCTGGATCGCGCCTGCCAGAGGACGT-AAACTCTGGAATCTTTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCACGCCCAGCGTGGTATTGGGCTCCGCC-T--TC----GA-GGCGGGCCTCAAAGTCAGTGGCGG-CACTGCCGGACCCT-AAGCGTAGTA-CTACTCGTCGCTTGTTGGGCTTCCGGCAGC-AGCCTGCC---AGCAACCCCC-A-TTTTTTCAA-GG
		Lirula_macrospora                 AAGAA-TATCA-GGCCTT-ACAGCC-CT-ATTCTCACCCAA-TGTATTTG-AAACT-TTGTTGCTTTGGCAGGCCCCTGGC--TCCG---GCTGGACAGCGCCTGCCAGAGGATCT-AAACCCTTGAATCTCTGCTGTCTGAGTTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCACGCTTTGCGTGGTGTTGGGCCT-GCCC-CCT----AAAGGGCTTGCCTCAAAATCAGTGGCGGCCGCTGTTCGACCCT-AAGCGTAGTAACTATTCGTCGCTT-CTGGG-TGAGA--G-CAAGCCTGCT---AG-AACCCCC-A--C-TT-CAAAGG
		Terriera_2                        AAGAA-TA-CA-GGC-TTCACGGCCGCT-ATTCTCACCCTT-TGTAAACAAAAACT-T-GTTGCTTTGGCAGGCCTCCGGCGCTCCGCGCGCTGGGCTGCGCCTGCCAGAGGATTT-AAACCCTAGAATCACTGCTGTCTGAGT-ATTACTTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTTTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTTGAGCGTCATTACAACCCTCACGCTTCGCGTGGTATTGGGCT-CGCC-TGCTC-----A-GGCTTGCCTTAAAATCAGTGGCGG-CGGCATCGAACCCT-AAGCGTAGTAA-TACTCGCAGCTT-CTGGGAGCCGGTGG-C-AGCTTGCTA--ACAAACCCCC-A-ATTTTT-AAAGG
		Terriera_1                        AAGAA-TA-CA-GGC-TTCACGGCCGCT-ATTCTCACCCTT-TGTATACAAAAACT-T-GTTGCTTTGGCAGGCCTCCGGCGCTCCAGGCGCTGGGTTGCGCCTGCCAGAGGATTT-AAACCCTGGAATCATTGCTGTCTGAGT-ATTACTTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTTTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTTGAGCGTCATTACAACCCTCACGCTTCGCGTGGTATTGGGCT-CGCC-TGCTC-----A-GGCTTGCCTTAAAATCAGTGGCGG-CGGCATCGAACCCT-AAGCGTAGTAA-TACTCGCAGCTT-CTGGGAGCCGGTGG-C-AGCTTGCTA--ACAAACCCCC-A-ATTTTT-AAAGG
		Lophodermium_picea                AAGAA-TTT-AC-GTCTTC--GGACGCT-ATTCTCACCCTT-TGTATA--TTAACT-TTGTTGCTTTGGCAGGCCTCCGGC--TTCG---GCTGGGTCGTGTCTGCCAGAGG-CCT--AACTCTTGAATCACTGCGGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAATTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCT-CGCCCTG-T------AGGGCCTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCCT-AAGCGTAGTAA-TACTCGCCGCTTG-TGGACTCAG-CG--CGTGGCCTGCCA-GCCAACCCCC-AC-CAT--C-AAGG
		Lophodermium_actinothyrium1       AAGAA-T-CGGTGGCCCTCGCGGCCCC--ATTCTCACCCTT-TGCGTACCTAAACTACAGTTGCTTTGGCCGGCCTCCGG--------------------GCCGGCCAGAGGACCT-AAACCCTTGAATCATTGCTGTCTGAGT-ACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCT-CGCCCCCC----CGG-GGGCCTGCCTCAAAGTCAGTGGCGG-CCCCGTCCGGTC-TCAAGCGCAGTAA-TGCTCGTCGCTTGTCAGGCCCGGGCGG-C--GGTTGGCC--AGCAACCCCCCATACTTTAC-AAGG
		Lophodermium_agathidis_2          AAGAAAT--GGTGGCCCTCGTGGCCCC--GTTTTCACCCTA-TGCATACGATAT-TCTAGTTGCTTCGGCCAGCCGCAAG--------------------GCCGGTCGGAAGACCTGAAACTCTTGAATTTTTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTTCGCCCCCC----CGGA-GGCCGGCCTCAAATTCAGTGGCGG-TTCCGTCCGGTC-TCAAGCGCAGTAA-TACTCGTCGCTTGCTAGGCTTGGGCGG-C-AGCTTGCTA--TGTTACCCCC-A-ATTTTACAAAGG
		Lophodermium_agathidis            AAGAAAT--GGCGGCCCTCGTGGTCCC--GTTTTCACCCTG-TGCATACGATAT-TCTAGTTGCTTCGGCCAGCCGCAAG--------------------GCCGGCCAGAAGACCTGAAACTCTTGAATTTTTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTTCGCC-TCT-C--CGGA-GGCCGGCCTCAAATTCAGTGGCGG-TTCCGTCCGGTC-TCAAGCGCAGTAA-TGCTCGTCGCTTGCTAGGCTTGGGCGG-C-GGCTTGCCA--T-CTACCCCC-A-ATTTTACAAAGG
		Lophodermium_baculiferum_2        AAGAA-T-ACCGGGCCCTCCGGGGCCCTCATTCTAACCCTT-TGTCTATCT-AACT-TTGTTGCTTTGGCGG------------------------T--AAAACGCCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGCC-TCC--------GGGCTGGCCTAAAAATCAGTGGCGG-CACAGTCTGACCTT-AAGCGCAGTAA-TACTCGTCGCTTG-TAGGCTCAGGTTG-C-GGCTTGCTA--AACAACCCCC-AC-CAT-AC-AAGG
		Lophodermium_sp_5                 AAGAA-TAACAGGG-TCTTCGGGCCCCT-ATTCTCACCCTT-TGTATACCT-AACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAAGGGACCT-AAACCCTCGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGTT-CGCC-TCC--------GGGCTTACCTCAAAATCAGTGGCGGCCTC-GTCTGACC-TCAAGCGTAGTAA-TACTCGTCGCTTGG-AGAATCAGGCGGGT--GCTTGCT---ATCAACCCCC-AC-C-ATACT-AGG
		Lophodermium_molitoris            AAGAA-TAACAGGG-TCTTCGGGCCCCT-ATTCACACCCTTATGTCTACCT-AACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACCT-AAACTCTAGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGTT-CGCC-TCC--------GGGCTTACCTCAAAATCAGTGGCGGCCTCGG-CTGACA-TCAAGCGTAGTAA-TACTCGTCGCTTGG-AGAATCAGTCGTAA-AGCCTGCT---AGCAACCCCC-ACACTATACT-AGG
		Lophodermium_baculiferum_3        AAGAA-TAACAAGG-CCTCCGGGC-CCT-ATTCTCACCCTT-TGTATAC-TTAACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACCGTCTGGTATTCCGGACGGTATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCC--------GGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCTT-AAGCGCAGTAA-TTACCGCCGCTTG-TAGGACCAGAGGGAT-GGCTCGCTA--AG-AACCCCC-ACT-TT-ACAAAGG
		Lophodermium_baculiferum_4        AAGAA-TAACAAGG-CCTCCGGGC-CCT-ATTCTCACCCTT-TGTATAC-TTAACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACCGTCTGGTATTCCGGACGGTATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCC--------GGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCTT-AAGCGCAGTAA-TTACCGCCGCTTG-TAGGACCAGAGGGAT-GGCTCGCTA--AG-AACCCCC-ACT-TT-ACAATGG
		Lophodermium_baculiferum          AAGAA-T-ACACGG-CCTCACGGC-CCT-ATTCTCACCCTT-TGTATAC-TTAACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCC--------GGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCTT-AAGCGCAGTAA-TACTCGCCGCTTG-TAGAATCAGGAGGAT-AGCTTGCTA--AG-AACCCCC-A-TCAT-ACAAAGG
		Leptostroma_decipiens_2           AAGAA-T-ACACGG-CCTCACGGC-CCT-ATTCTCACCCTT-TGTATAC-TTAACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCC--------GGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCTT-AAGCGCAGTAA-TACTCGCCGCTTG-TAGAATCAGGAGGAT-AGCTTGCTA--AG-AACCCCC-A-TCAT-ACAAA-G
		Leptostroma_decipiens             AAGAA-T-ACACGG-CCTCACGGC-CCT-ATTCTCACCCTT-TGTATAC-TTAACT-TTGTTGCTTTGGCGG----------------------------AAACGTCAGAGGACC-GAAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCC--------GGGCTTGCCTCAAAGTCAGTGGCGG-CACCGTCTGACCTT-AAGCGCAGTAA-TACTCGCCGCTTG-TAGAATCAGGAGGAT-AGCTTGCTA--AG-AACCCCC-A-TCAT-ACAAA-G
		Lophodermium_nitens               AAGAA-T-ACATGG-CCTTCGGG-TCCT-ATTCTCACCCTT-TGTCTACCAAAACTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATC-AAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGTC-TCCTCT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-CACACGACGCTTGCC--GGT--GAAGGTT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Lophodermium_nitens_BRMC17M       --------------------------------------------CCTACCAACCCTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATT-TTTTCCTTGAATCTCTGCTGGCTGAGT-ACTATATAAGAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCCTTT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-TACACGACGCTTGCT--GGC--GAAGGTT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Lophodermium_nitens_NS4           --------------------------------------------TTTACCAAAACTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATC-AAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCCTTT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-TACACGACGCTTGCC--GGT--GAAGGTT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Meloderma_desmazieri_CBS          AAGAA-T-ACATGG-CCTTCGGG-TCCT-ATTCTCACCCTT-TGTTTACCAAAACTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATC-AAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TCCTCT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-TACACGACGCTTGCC--GGT--GAAGGTT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Leptostroma_sp                    AAGAA-T-ACATGG-CCTTCGGG-TCCT-ATTCTCACCCTT-TGTCTACCAAAACTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATC-AAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TGCTCT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-TACACGACGCTTGCC--GGT--GAAGATT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Lophodermium_sp_4                 AAGAA-T-ACATGG-CCTTCGGG-TCCT-ATTCTCACCCTT-TGTCTACCAAAACTCTTGTTGCCTTGGCGC----------------------ATTCGT--GCGCCAAAGGAATC-AAACCCTTGAATCTCTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCC-TGCTCT-----GGCCT-GCCTCAAAATCAGTGGCGG-CACAGTCCGATCCTCAAGCGCAGTAA-TACACGACGCTTGCC--GGT--GAAGATT--GCTGCTCC--AGAAACCCCCCAC--AAACTAAAGG
		Lophodermium_pinastri_2           AAGAA-TAACCGGG-CCTTCGGGCCCCCTATTCTCACCCTT-TGTCTACCA-CACT-TTGTTGCCTTGGCGC--------------------------TTCGGCGCCAGTGGAA-CGAAACCCTGGAATCATTGCTGTCTGAAT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCT-CGCCCTG---TA---GGGCCT-GCCTCAAAATCAGTGGCGGCCACCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGTAAGGGA-GGGCCGAA--G-CCGTCATG-ACAACCCCC-AC---TTTACAAGG
		Lophodermium_pinastri             AAGAA-TAAACGGG-CCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCA-TAC-ATTGTTGCCTTGGCGC--------------------------CTCG-CGCCAGTGGACA-GAAACCCTTGAATCATTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCT-CGCCCTC---TA----GGGCTTGCCTCAAAATCAGTGGCGGCCACAGCCCGACCTCT-AGCGCAGTAC-TACTCGTCGC-TGGAAGG-AGAGGCC-TA--GGCGCT-ATG-ACAACCCCC----TTTTTACAAGG
		Elytroderma_deformans             AAGAA-TTAC-GGG-CTTTCGGGCCCTCTATTCTCACCCTT-TGTTTACCA-CACT-TTGTTGCCTTGGCGC---------------------------CTAGCGCCAGCGGA-TCAAAACCCTTGAATCATTGCTGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCAGCTTGGTGTTGGGCT-CGCCCCG-CTTACCCGGGGCTTGCCTCAAAATCAGTAGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TACTCGTCGC-TCGGAGGGAAAGACGGTA--T-CGTTAACCCG-AACCCCC-------ACACAAGG
		Lophodermium_seditiosum           TAGAA-T-ACACGCGCC-GCGAGGTGCT-ATTCTCACCCTT-TGTTTACCA-CACTC-AGTTGCCTTGGCGC---------------------------ACAGCGCCAGCGGA-TTGAAACTCCTGAATCATTGCTGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCT-CGCCTTCGTC-ACGAAGGCCT-GCCTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGACAGCAGGTGCCGTCAGC-ACAACCCCC-----ACATACAAGG
		Lophodermium_sp_3                 AAGAAAGGAT----GCCTTCGGGCTCA--CTTCTCACCCTT-TGTTTACCA-CAC-CTAGTTGCCTTGGCGC---------------------------ACAGCGCCAGTGGA-TCGAAACCCATGAATCATTGCTGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCGGC-TACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGTTAGGGAAGGGCAGCAAGTGCCGTCATGTACAACCCCC---ACACACACAAGG
		Lophodermium_australe_2           CAGAA-GGATAT-CGCCCTCGGGCTTCT-CTTCTCACCCTT-TGTTTACCA-CAC-GTAGTTGCCTTGGCGC---------------------------TCCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGTTAGGGAAGGGTAGCAAGGGCCGTCAT--ACAACCCCC-----ACACACAAGG
		Lophodermium_australe             CAGAA-GGATAT-CGCCCTCGGGCTTCT-CTTCTCACCCTT-TGTTTACCA-CAC-GTAGTTGCCTTGGCGC---------------------------TCCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGCCGC-TGTTAGGGAAGGGTAGCAAGGGCCGTCAT--ACAACCCCC-----ACACACAAGG
		Lophodermium_conigenum_2          CAGAA-GGATAT-CGCCCTCGGGCTTCT-CTTCTCACCCTT-TGTTTACCA-CAC-GTAGTTGCCTTGGCGC---------------------------TCCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGCCGC-TGTTAGGGAAGGGCAGCAAGGGCCGTCAT--ACAACCCCC-----ACACACAAGG
		Lophodermium_conigenum            CAGAA-GGATAT-CGCCCTCGGGCTTCT-CTTCTCACCCTT-TGTTTACCA-CAC-GTAGTTGCCTTGGCGC---------------------------TCCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTCTGAGT-ACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGCCGC-TGTTAGGGAAGGGCAGCAAGGGCCGTCAT--ACAACCCCC-----ACACACAAGG
		Meloderma_desmazieri_MD3          --------------------------------------------TTTACCA-CAC-GTAGTTGCCTTGGCGC---------------------------ACCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTGTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCG-CTTACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCC---ACACACACAAGG
		Lophodermium_sp2                  CAGAA-GAACACAAGCCTTCGGGCTCAT-CTTCTCACCCTT-TGTTTACCA-CACT-TAGTTGCCTTGGCGC---------------------------ATCGCGCCAGTGGA-TCGAAACTCGTGAATCATTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCG-CTTACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCC---ACACACACAAGG
		Lophodermium_sp._1                CAGAA-GAACACACGCCTTCGGGCTCGT-CTTCTCACCCTT-TGTTTACCA-CACT-TAGTTGCCTTGGCGC---------------------------ACCGCGCCAGTGGA-TCGAAACTCCTGAATCATTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCG-CTTACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCC-ACACACACACAAGG
		Lophodermium_indianum             CAGAA-GAAAGCACGCCTTCGGGCTCCT-CTTCTCACCCTT-TGTTTACCA-CACT-TAGTTGCCTTGGCGC---------------------------ACCGCGCCAGTGGA-TCGAAACTCGTGAATCATTGCCGTCTGAGT-ACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCG-CTTACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCC-ACACACACACAAGG
		Lophodermium_indianum_2           CAGAA-GAAAGCACGCCTTCGGGCTCCT-CTTCTCACCCTT-TGTTTACCA-CACT-TAGTTGCCTTGGCGC---------------------------ATCGCGCCAGTGGA-TCAAAACTCGTGAATCATTGCCGTCTGAGT-ACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCC-CGCCCCG-CTTACCCGGGGCTCGCTTCAAAATCAGTGGCGGCCGCCGTCCGACCTTC-AGCGCAGTAA-TGCTCGTCGC-TGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCC-----ACACACAAGG
	;
END;

BEGIN CODONS;
GENCODE UNIVNUC 
 ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 
 END;