NEXUS
[File created by TreeBASE:  7/26/07  20:58:15]
[Matrix accession#: M773]

BEGIN TAXA;
	TITLE M773;
	DIMENSIONS  NTAX=12;
	TAXLABELS
		Fusarium_sambucinum_NRRL13708	Memnoniella_subsimplex_ATCC32334	Memnoniella_subsimplex_ATCC18838	Memnoniella_subsimplex_ATCC22700	Memnoniella_subsimplex_ATCC32888	Memnoniella_sp._ATCC22699	Memnoniella_echinata_ATCC22697	Memnoniella_echinata_ATCC20513	Memnoniella_echinata_NRRL1694	Memnoniella_echinata_ATCC34173	Memnoniella_echinata_NRRL1982	Memnoniella_echinata_UAMH6594
	;
END;

BEGIN CHARACTERS;
	TITLE M773;
	DIMENSIONS NCHAR=756;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Fusarium_sambucinum_NRRL13708          CGCCCGTCGCTACTACCGATTGAATGGCTCAGTGAGGCGTCCGGACTGGCCCAGAGTGGTGGGCAACTACCGCTCAGGGCCGGAAAGCTCTCCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCC-C-TGTGAAC-ATACCTTAATGTTGCCTCGGCGGATCAGCCCGCGCCCCGTAAAAC---GGGACG---GCCCGCCAGAGGACCC---AAACTCTAATGTTTCTTATTGTAACTTCTGAGTAAAACAAACAAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGTATTCCGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAAGCCCCC-----------------GGGTTTGGTGTTGGGGATCGGCTCTGCCCTTCTGGCGGCGCCGCCCCCGAAATACATTGGCGGTCTCGCTGCAGCCTCCATTGCGTAGTAGCTAACACCTCGCAACTGGAACGCGGCGCG-CCATGCCGTAAAACCCC--AA-CTTCTGAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCT
		Memnoniella_subsimplex_ATCC32334       CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGCCCAGGGAGGCGGGTAACTGCCCCCCAGGGCCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTAACAAA--CTCCCAA-CCCAC-TGTGGAC-ATACCCATTCGTTGCTTCGGCGGTAGCGCCCCGGC----T-GAGCCCGGAGCAAGGCGCCCGCCGAGGGACCCCC-AAACCAGTTTTCTTACAGCGGGATATTCTGAGTAAAAA-CACAAAT-CATCAAAACTTTTAACAACGGATCTCTTGGCTCTGCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTGACAACCCTCAGGCCCCCGCTGACCTTCGGCGGGGGGACCTGGCATTGGGGATCAGCCCGGCCCTCG-GGCGGTGCTGTCCCCCAAACCCAGCGGCGGTCACGCTTAGCCCTCCCCTGCGTAGTAGC-AT-ACCTCGCA-CCGGATCTAGGCATGGCCATGACCCAAAACCCCCTAATTTTCAAGACGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_subsimplex_ATCC18838       CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGCCCAGGGAGGCGGGTAACTGCCCCCCAGGGCCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTAACAAAA-CTCCCAA-CCCAC-TGTGAAC-ATACCTATTTATTGCTTCGGCGGTAGCGCCCCGGC----T-GAGCCCGGAGCAAGGCGCCCGCCGAGGGACCCCC-AAACCAGTTTTCTTATAGCGGAATATTCTGAGTAAAA--CACAAAT-CATTAAAACTTTTAACAACGGATCTCTTGGCTCTGCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTGACAACCCTCAGGCCCCCGCTGACCTTCGGCGGGGGGACCTGGCATTAGGGATCAGCCTGCCCCTCG-GGCGGTGCTGTCCCCCAAACCCAGCGGCGGTCACGCTTAGCCCTCCCCTGCGTAGTAAT-AT-ACCTCGCA-CTGGATCTAGGCATGGCCATGACCTAAAACCCC-TAATTTTCAAGACGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_subsimplex_ATCC22700       CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGCCCAGGGAGGCGGGTAACTGCCCCCCAGGGCCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTAAAAAAAACTCCCAA-CCCAC-TGTGAAC-ATACCTATTTGTTGCTTCGGCGGTAGCGCCCCGGC----T-GAGCCCGGAGCAAGGCGCCCGCCGAGGGACCCCCAAAACCAGTTTTCTTATAGCGGGATATTCTGAGTAAAAAACACAAAT-CATCAAAACTTTTAACAACGGATCTCTTGGCTCTGCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTGACAACCCTCAGGCCCCCGCTGATCTCCGGCGGGGGGACCTGGCATTAGGGATCAGCCTGCCCCTCG-GGCGGTGCTGTCCCCCAAACCTAGCGGCGGTCACGCTTAGCCCTCCCCTGCGTAGTAGC-AT-ACCTCGCA-CCGGATCTAGGCGTGGCCATGACCTAAAACCCC-TAAATCTCAAGACGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_subsimplex_ATCC32888       CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGCCCAGGGAGGCGGGTAACTGCCCCCCAGGGCCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTAACAAA--CTCCCAA-CCCAC-TGTGGAC-ATACCTATTTGTTGCTTCGGCGGTAGCGCCCCGGC----T-GAGCCCGGAGCAAGGCGCCCGCCGAGGGACCCCC-AAACCAGTTTTCTTATAGCGGGATACTCTGAGTAAAA--CACAAAT-CATCAAAACTTTTAACAACGGATCTCTTGGCTCTGCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTGACAATCCTCAGGCCCCCGCTGACCTTCGGCGGGGGGACCTGGCATTAGGGATCAGCCTGCCCCTCG-GGCGGTGCTGTCCCCCAAACTCAGCGGCGGTCACGCTTAGCCCTCCCCTGCGTAGTAGC-AT-ACCTCGCA-CTGGATCTAGGCATGGCCATGACCTAAAACCCC-TAATTTTCAAGACGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_sp._ATCC22699              CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCTTACCCA-TCGTTGCTTCGGCGGGAGAGCCCCGGCGCCCTCGGGCCCGGAACCAGGCGCCCGCCG-GAGACCCC--AAACTCCATGTTTTAAC-GAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTCCGAGCGTCATTT-CAACCCTCAGGCTCCCCCT--TCCG-GG-GGAGGAGCCTGGCGTTGGGGATCGGCCCGCCCCC-GCG-CGGAGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-CCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_ATCC22697         CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCC-GCGGCGGCGCCGTCCCCGAAACCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_ATCC20513         CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCCCGCGGCGGCGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_NRRL1694          CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCC-GCGGCGGCGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_ATCC34173         CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTACAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCCCGTGGCGGCGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_NRRL1982          CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCC-GTGGCGGCGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
		Memnoniella_echinata_UAMH6594          CGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCGTTCGGACTGGTCCAGGGAGGTGGGCAACTACCACCCAGGACCGGAAAGTTCTCCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACCGAGTTTACAA---CTCCCAAACCCTTATGTGAACCATACCTA-TCGTTGCTTCGGCGGGAGAGCCCCGGCCCCCTCGGGCCCGGAGTCAGGCGCCCGCCG-GAGACCCC--AAACTCTTTGTTTTACTTGAGTATCGTCTGAGTGGTATAAACAAATACATCAAAACTTTTAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGTCAGCATTCTGGCGGGCATGCCTGTTCGAGCGTCATTT-CAACCCTCAGGACCCCCCT--TTCGCGG-GGAGGGACCTGGCGTTGGGGATCGGCCCGCCCCCCGTGGCGGCGCCGTCCCCGAAATCTAGTGGCGGTCTCGCTGCAGCCTCCCCTGCGTAGTAGTTACAACCTCGCA-TCGGAGCGCGGCGCGGCCACGCCGTAAAACCCCC-GACTTTCTGAACGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTC
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 756 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS GAPMODE = NEWSTATE ; 
 END;