NEXUS
[File created by TreeBASE:  7/26/07  20:58:24]
[Matrix accession#: M802]

BEGIN TAXA;
	TITLE M802;
	DIMENSIONS  NTAX=11;
	TAXLABELS
		Panellus_stypticus_New_Zealand	Dictyopanus_pusilus	Panellus_stypticus_Montreal	Panellus_stypticus_Tennessee	Panellus_stypticus_Sweden	Panellus_stypticus_Switzerland	Panellus_stypticus_Alaska	Panellus_stypticus_Eastern_Rus	Panellus_stypticus_California	Panellus_stypticus_Australia	Panellus_stypticus_Tasmania
	;
END;

BEGIN CHARACTERS;
	TITLE M802;
	DIMENSIONS NCHAR=664;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Panellus_stypticus_New_Zealand       TGAACCTGCGGAAGGATCATTATTGAATACGCTTTTGGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAA-CTGTTTAAATCTTCACTTGTGCACCTTTT-GTAGTC----------------------------------TTGGG--AG--------------------AGAGACTATGTTTTCATATACA-TTCAAAAGTTACAGAATGTCTT------------GAGGCCTTTATAAAGTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGGAGG-CTTTC--------CTAGGCTTGGATGTGAGGGCTTTTGCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTGGGTTCC------ACAA--GTCGCTCGGTGTGATAAATTATCTACACCGTATTGACTTGCA---------CCTGCTTATAACC----------AACCGTAGTTTGACATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Dictyopanus_pusilus                  TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGCTGATGCTGGCCTTTCGGGGCATGT-GCTCGCATTCAAA-CTATTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTT-GAGGTTGTCTCCGCTGCAAATGCGGGTTTTCAGGGTTGA-CTTGCTCTCCCTGGGCTTCAAAGACTATGTTTTCATATACATTTGAAAAGTTATTGAATGTCTTCTTATCGGCCGCAAGGCCTT--TAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTT---GTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTCAAATGCATTAGTGGGAT-CTCTTGCAGAACCGTCACTTGGTGTGATAA-TTATCTACGCC-TCCTGACTTGCAATTGAGAGTCTTGCTCATAACCGTCTTCGGAC-AGCTT--TTCAACATTTGACCTCAAATCAGGTAGGAGTACCCGCTGAACTT
		Panellus_stypticus_Montreal          TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCTTG-TCTCCCTGGGCTTCAGAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATTGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGGTCCTCTTGTGGAACCGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACCGTGTTCGGACAAGCTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Tennessee         TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTCAGAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATTGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGGTCCTCTTGTGGAACCGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACCGTCTTCGGACAAGCTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Sweden            TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTTAAAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGATCCTCTTGTGGAACTGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACTGTCTTCGGACAA-CTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Switzerland       TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTTAAAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGATCCTCTTGTGGAACTGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACTGTCTTCGGACAA-CTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Alaska            TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTCAAAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAAAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGATCCTCTTGTGGAACTGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACTGTCTTCGGACAA-CTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Eastern_Rus       TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTCGAAGTCATCTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTCAAAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGATCCTCTTGTGGAACTGTCGCTCGGTGTGATAA-TTATCTACGCCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACTGTCTTCGGACAA-CTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_California        TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCATTTCCGCTGCAAATGCGGG-TTTTTGGG--AGTCT-G-TCTCCCTGGGCTTCAAAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGAAGG-CTTTTGTGGTCTTCTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTAGGATCCTCTTGTGGAACTGTCGCTCGGTGTGATAA-TTATCTACGCTGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACTGTCTTCGGACAA-CTTC-TTTAATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Australia         TGAACCTGCGGAAGGATCATTATTGAATACGCTTT-GGGTGTTGACGCTGGCCTTTCGAGGCATGT-GCTCGCGTTCAAA-CTGTTTAA-TCTTCACTTGTGCACCTTTT-GTAGTCTTTTGAAGTCGTCTCCGCTGCAAATGCGGGTTTTTTGGG--AGTCTTG-TCTCCCTGGGCTTCAGAGACTATGTTTTCATATACA-TTGAAAAGTTACAGAATGTCTTCTTATCGGCCGCGAGGCCTTTATAAACTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGGAGGTCTTTC--------CTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTGGGTTCC------ACAA--GTCGCTCGGTGTGATAA-TTATCTACACCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACCGTCTTCGGACAAGC----TTTGATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
		Panellus_stypticus_Tasmania          TGAACCTGCGGAAGGATCATTATTGAATACGCTTTTGGGTGTTGACGGTGGCCTTTCGAGGCATGTTGCTCGCATTCAAAACTGTTTAA-TCTTCACTTGTGCACCTTTTTGTAGTCTTTTGAAGTCGTCTCCGCTGCAAATGCGGGTTTTTTGGG--AGTCT-G-TCTCCCTGGGCTTCAGAGACTATGTTTTCATATACG-TTGAAAAGTTACAGAATGTCTT-T----------GAGGCCTTTATAAAGTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCCCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTATCAACCTTGGAGG-CTTTTC-------CTAGGCTTGGATGTGAGGGCTT--GCTGGCTTCCTTCAGTGGATTGGTCTGCTCCCTTTAAATGCATTAGTGGGTTCC------ACAA--GTCGCTCGGTGTGATAATTTATCTACACCGTATTGACTTGCAAT-GAGAG-CCTGCTTATAACCGTCTTCGGACAAGC----TTTGATATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 664 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;