#NEXUS [written Fri Jan 13 23:41:31 CST 2012 by Mesquite version 2.5 (build j77) at WangY-PC/192.168.53.236] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=74; TAXLABELS Fnj7405_2 Fnj7409_2 Fnj7402_2 Neotyphodium_australiense_937_2 Neotyphodium_chisosum_134_3 Epichloe_typhina_ATCC201669 Neotyphodium_tembladerae_1169_2 Neotyphodium_tembladerae_4055_2 Epichloe_liyangensis_Ply9101_2 Epichloe_liyangensis_Ply9102_2 Neotyphodium_huerfanum_ATCC64040 Epichloe_typhina_ATCC201667 Neotyphodium_typhinum_var._canariense_989 Epichloe_clarkii_ATCC200742 Epichloe_clarkii_ATCC200741 Epichloe_typhina_ATCC200740 Epichloe_typhina_ATCC200738 Epichloe_typhina_E432 Epichloe_typhina_ATCC200851 Epichloe_typhina_ATCC201666 Epichloe_sylvatica_ATCC200748 Epichloe_typhina_ATCC200739 Epichloe_sylvatica_ATCC200751 Neotyphodium_melicicola_827 Neotyphodium_aotearoae_829 Epichloe_festucae_ATCC201550 Epichloe_festucae_ATCC90661 Neotyphodium_lolii_135 Neotyphodium_coenophialum_e19_1 Neotyphodium_tembladerae_1169_1 Neotyphodium_tembladerae_4055_1 Neotyphodium_australiense_937_1 Neotyphodium_siegelii_e915_2 Neotyphodium_coenophialum_e19_2 Neotyphodium_occultans_992_2 Epichloe_sp._9924 Neotyphodium_stromatolongum_Cnj6611 Neotyphodium_stromatolongum_Cnj6617 Epichloe_baconii_ATCC76552 Epichloe_amarillans_906 Epichloe_amarillans_ATCC200743 Neotyphodium_chisosum_134_2 Epichloe_baconii_ATCC200745 Epichloe_glyceriae_ATCC200747 Epichloe_glyceriae_ATCC200755 Neotyphodium_gansuense_var._inebrians_817 Neotyphodium_gansuense_var._inebrians_818 Epichloe_brachyelytri_ATCC200752 Epichloe_brachyelytri_ATCC201561 Epichloe_elymi_ATCC200850 Epichloe_elymi_ATCC201554 Epichloe_bromicola_9633 Neotyphodium_occultans_992_1 Epichloe_bromicola_9630 Epichloe_yangzii_Rnj3302 Neotyphodium_uncinatum_e167 Neotyphodium_siegelii_e915_1 Neotyphodium_chisosum_134_1 Neotyphodium_sinicum_Rts2102_1 Neotyphodium_sinofestucae_Fnj4602_1 Fnj7409_1 Fnj7405_1 Fnj7402_1 Neotyphodium_sinofestucae_Fnj6606_1 Neotyphodium_sinicum_Rts2102_2 Neotyphodium_sinofestucae_Fnj6606_2 Neotyphodium_sinofestucae_Fnj4602_2 Neotyphodium_sinicum_Rxy6106_2 Epichloe_liyangensis_Ply9102_1 Neotyphodium_sinicum_Rxy6106_1 Epichloe_yangzii_Rnj4301 Epichloe_yangzii_Rnj4201 Epichloe_liyangensis_Ply9101_1 Claviceps_purpurea_ATCC20102 ; END; BEGIN CHARACTERS; TITLE 'Character Matrix_tefA'; DIMENSIONS NCHAR=581; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Fnj7405_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Fnj7409_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Fnj7402_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_australiense_937_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_chisosum_134_3 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC201669 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_tembladerae_1169_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_tembladerae_4055_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_liyangensis_Ply9101_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_liyangensis_Ply9102_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_huerfanum_ATCC64040 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTATAGTCGTT Epichloe_typhina_ATCC201667 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_typhinum_var._canariense_989 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_clarkii_ATCC200742 GTGAGATATATCTTTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_clarkii_ATCC200741 GTGAGATATATCTTTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC200740 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC200738 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_E432 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC200851 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC201666 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_sylvatica_ATCC200748 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_typhina_ATCC200739 GTGAGATATATCTCTTTCACTTCACGCATAATATGTGACGTTCAATCGTT Epichloe_sylvatica_ATCC200751 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_melicicola_827 GTGAGATATTCCTCTTTCACTCCACGCATAATATGTGACGTTCACTCGTT Neotyphodium_aotearoae_829 GTGAGATATTCCTCTTTCACTCCACGCATAATATGTGACGTTCACTCGTT Epichloe_festucae_ATCC201550 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Epichloe_festucae_ATCC90661 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_lolii_135 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_coenophialum_e19_1 GTAAGATAT-TTTACCCCTCT-CACGCATGATATCCGATGTTCACTCGCT Neotyphodium_tembladerae_1169_1 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_tembladerae_4055_1 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_australiense_937_1 GTAAGATAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_siegelii_e915_2 GTAAGACAT-TTTACCCCTCT-CACGCATAATATCCGATGTTCACTCGCT Neotyphodium_coenophialum_e19_2 GTAAGATAT-TCTACCCCTCT-CACGCATAATATCTGATGTTCACTCGTT Neotyphodium_occultans_992_2 GTAAGATAT-TCTACCCCTC---ACGCATAATATCTGATGTTCACTCGTT Epichloe_sp._9924 GTAAGATAT-TCTACCCCT?T-CACGCATAATATCTGATGTTCACTCGTT Neotyphodium_stromatolongum_Cnj6611 GTAAGATAC-TCTACCCCTC---ACGCATAATATCTGATGTTCACTCGTT Neotyphodium_stromatolongum_Cnj6617 GTAAGATAC-TCTACCCCTC---ACGCATAATATCTGATGTTCACTCGTT Epichloe_baconii_ATCC76552 GTAAGATAT-TCTACCCCTCT-CACGCATAATATCTGATGTTCACTCGTT Epichloe_amarillans_906 GTAATATAT-TCTACTCCTCT-CACGCATAATATCTGATGTTCACTCGTT Epichloe_amarillans_ATCC200743 GTAATATAT-TGTACTCCTCT-CACGCATAATATCTGATGTTCACTCGTT Neotyphodium_chisosum_134_2 GTAATATAT-TCTACCCCTCT-CACGCATAATATCTGATGTTCACTCGTT Epichloe_baconii_ATCC200745 GTAAGATAT-TCTACCCCTCT-CACGCATAATATCTGATGTTCACTCGTT Epichloe_glyceriae_ATCC200747 GTAAGATACTCTTCTTTCACGTCGCGCATAATATGTGATGTTCACTCGTT Epichloe_glyceriae_ATCC200755 GTAAGATACTCTTCTTTCACGTCGCGCATAATATGTGATGTTCAGTCGTT Neotyphodium_gansuense_var._inebrians_817 GTAAGATA---TTATTTTACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_gansuense_var._inebrians_818 GTAAGATA---TTATTTTACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_brachyelytri_ATCC200752 GTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_brachyelytri_ATCC201561 GTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_elymi_ATCC200850 GTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_elymi_ATCC201554 GTAAGATATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_bromicola_9633 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_occultans_992_1 GTAAGACGTTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_bromicola_9630 GTAAGACATTCTTCTTTCACCTCACGCATAATATGTGATGTTCACTCGTT Epichloe_yangzii_Rnj3302 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_uncinatum_e167 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_siegelii_e915_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_chisosum_134_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_sinicum_Rts2102_1 GTAAGACATTCTTCTTTCAATTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_sinofestucae_Fnj4602_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Fnj7409_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Fnj7405_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Fnj7402_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_sinofestucae_Fnj6606_1 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_sinicum_Rts2102_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_sinofestucae_Fnj6606_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_sinofestucae_Fnj4602_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Neotyphodium_sinicum_Rxy6106_2 GTGAGATATATCTCTTTCACTCCACGCATAATATGTGACGTTCAGTCGTT Epichloe_liyangensis_Ply9102_1 GTAAGACATTCTTCTTTCAATTCACGCATAATATGTGATGTTCACTCGTT Neotyphodium_sinicum_Rxy6106_1 GTAAGACATTCTTCTTTCAATTCACGCATAATATGTGATGTTCACTCGTT Epichloe_yangzii_Rnj4301 GTAAGACATTCTTCTCTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_yangzii_Rnj4201 GTAAGACATTCTTCTTTCACTTCACGCATAATATGTGATGTTCACTCGTT Epichloe_liyangensis_Ply9101_1 GTAAGACATTCTTCTTTCAATTCACGCATAATATGTGATGTTCACTCGTT Claviceps_purpurea_ATCC20102 GTAAGAGCT-TTTTTATTATTGTTCACGTCGATTTCAGAGATTGCTTGCG Fnj7405_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Fnj7409_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Fnj7402_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_australiense_937_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_chisosum_134_3 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_typhina_ATCC201669 GCAATGTGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_tembladerae_1169_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_tembladerae_4055_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_liyangensis_Ply9101_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_liyangensis_Ply9102_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_huerfanum_ATCC64040 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_typhina_ATCC201667 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_typhinum_var._canariense_989 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_clarkii_ATCC200742 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTCAAGG Epichloe_clarkii_ATCC200741 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTCAAGG Epichloe_typhina_ATCC200740 GCAATTCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTCAAGG Epichloe_typhina_ATCC200738 GCAATGTGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTCAAGG Epichloe_typhina_E432 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTCAAGG Epichloe_typhina_ATCC200851 GCAACGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACTTCAAGG Epichloe_typhina_ATCC201666 GCAACGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACTTCAAGG Epichloe_sylvatica_ATCC200748 GCAATGTGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_typhina_ATCC200739 GCAATGTGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_sylvatica_ATCC200751 GCAATGTGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_melicicola_827 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--TG Neotyphodium_aotearoae_829 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--TG Epichloe_festucae_ATCC201550 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_festucae_ATCC90661 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_lolii_135 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_coenophialum_e19_1 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_tembladerae_1169_1 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_tembladerae_4055_1 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_australiense_937_1 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_siegelii_e915_2 GCATTGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_coenophialum_e19_2 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_occultans_992_2 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_sp._9924 GCAATGCGAGCCTGC--------CTTGTGTATCGCTTTGCAACCTTG-G- Neotyphodium_stromatolongum_Cnj6611 GCAATGCGAGCCTGCTTGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G- Neotyphodium_stromatolongum_Cnj6617 GCAATGCGAGCCTGCTTGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_baconii_ATCC76552 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_amarillans_906 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_amarillans_ATCC200743 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-GG Neotyphodium_chisosum_134_2 GCAATGCGAGCCTGC--------TTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_baconii_ATCC200745 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTTG-G- Epichloe_glyceriae_ATCC200747 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_glyceriae_ATCC200755 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_gansuense_var._inebrians_817 GCAATGCGAGCC--------------------CGCTATGCGACCTT--GG Neotyphodium_gansuense_var._inebrians_818 GCAATGCGAGCC--------------------CGCTATGCGACCTT--GG Epichloe_brachyelytri_ATCC200752 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--AG Epichloe_brachyelytri_ATCC201561 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_elymi_ATCC200850 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_elymi_ATCC201554 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_bromicola_9633 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_occultans_992_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_bromicola_9630 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_yangzii_Rnj3302 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_uncinatum_e167 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_siegelii_e915_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_chisosum_134_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinicum_Rts2102_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinofestucae_Fnj4602_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Fnj7409_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Fnj7405_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Fnj7402_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinofestucae_Fnj6606_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinicum_Rts2102_2 GCCATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinofestucae_Fnj6606_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinofestucae_Fnj4602_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinicum_Rxy6106_2 GCAATGCGAGCCTGC--------CTTGCGTGTCGCTTTGCAACCTT--GG Epichloe_liyangensis_Ply9102_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Neotyphodium_sinicum_Rxy6106_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_yangzii_Rnj4301 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_yangzii_Rnj4201 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Epichloe_liyangensis_Ply9101_1 GCAATGCGAGCCTGC--------CTTGTGTGTCGCTTTGCAACCTT--GG Claviceps_purpurea_ATCC20102 CGGTCACCAAAGTGT-----------GAATTTGATTCT---ACCTT--AG Fnj7405_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Fnj7409_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Fnj7402_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_australiense_937_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_chisosum_134_3 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC201669 TGGGCAAGCAAGC----GACTGCTCC----------------TCTTTTCG Neotyphodium_tembladerae_1169_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_tembladerae_4055_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_liyangensis_Ply9101_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_liyangensis_Ply9102_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_huerfanum_ATCC64040 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC201667 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_typhinum_var._canariense_989 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_clarkii_ATCC200742 TGGGCAAGCAAGC----GACTGCCCC----------------TCTCTTCG Epichloe_clarkii_ATCC200741 TGGGCAAGCAAGC----GACTGCCCC----------------TCTCTTCG Epichloe_typhina_ATCC200740 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC200738 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_E432 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC200851 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC201666 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_sylvatica_ATCC200748 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_typhina_ATCC200739 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_sylvatica_ATCC200751 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_melicicola_827 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_aotearoae_829 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_festucae_ATCC201550 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Epichloe_festucae_ATCC90661 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_lolii_135 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_coenophialum_e19_1 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_tembladerae_1169_1 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_tembladerae_4055_1 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_australiense_937_1 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_siegelii_e915_2 TGGGCAAGCAAGC----GACTTGCCC---------------CTCTTTTCG Neotyphodium_coenophialum_e19_2 TGGGCAAGCAAGC----GACTTTGCC--------------CCTCTTTTCG Neotyphodium_occultans_992_2 TGGGCAAGCAAGC----GACTTTGCC--------------CCTCTTTTCG Epichloe_sp._9924 TGGGCAAGCAAGC----GACTT-GCC--------------CCTCTTTTCG Neotyphodium_stromatolongum_Cnj6611 TGGGCAAGCAAAC----GACTT-GCC--------------CCTCTTTTCG Neotyphodium_stromatolongum_Cnj6617 TGGGCAAGCAAAC----GACTT-GCC--------------CCTCTTTTCG Epichloe_baconii_ATCC76552 TGGGCAAGCAAGC----GACTTTGCC--------------CCTCTTTTCG Epichloe_amarillans_906 TGGGCAAGCAAGC----GACTTGCCCGCCCACCAAAGCCCCTCTTTTTCG Epichloe_amarillans_ATCC200743 TGGGCAAGCAAGC----GACTTGCCCGCCCACCAAAGCCCCTCTTTTTCG Neotyphodium_chisosum_134_2 TGGGCAAGTAAGC----GACTTGCCCGCCCACCAAAGCCCCTCTTTTTCG Epichloe_baconii_ATCC200745 TGGGCAAGCAAGC----GACTTGCCC--------------CTCTTTTTCG Epichloe_glyceriae_ATCC200747 TGGGCAAGCAAGCAAGCAACTGCCCC----------------TCTTTTCG Epichloe_glyceriae_ATCC200755 TGGGCAAGCAAGCAAGCAACTGCCCC----------------TCTTTTCG Neotyphodium_gansuense_var._inebrians_817 TGGGCAAAC--------AACTGCCCC----------------TCTTTTCG Neotyphodium_gansuense_var._inebrians_818 TGGGCAAAC--------AACTGCCCC----------------TCTTTTCG Epichloe_brachyelytri_ATCC200752 TGGGCAAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_brachyelytri_ATCC201561 TGGGCAAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_elymi_ATCC200850 TGGGCAAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_elymi_ATCC201554 TGGGCAAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_bromicola_9633 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_occultans_992_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_bromicola_9630 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_yangzii_Rnj3302 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_uncinatum_e167 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_siegelii_e915_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_chisosum_134_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_sinicum_Rts2102_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_sinofestucae_Fnj4602_1 TGGGCGAGCAAGC----ATCTGCCCC---------------TCTTTTTCG Fnj7409_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Fnj7405_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Fnj7402_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_sinofestucae_Fnj6606_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_sinicum_Rts2102_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_sinofestucae_Fnj6606_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_sinofestucae_Fnj4602_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Neotyphodium_sinicum_Rxy6106_2 TGGGCAAGCAAGC----GACTGCCCC----------------TCTTTTCG Epichloe_liyangensis_Ply9102_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Neotyphodium_sinicum_Rxy6106_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_yangzii_Rnj4301 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_yangzii_Rnj4201 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Epichloe_liyangensis_Ply9101_1 TGGGCGAGCAAGC----ATCTGCCCC----------------TCTTTTCG Claviceps_purpurea_ATCC20102 CGGGCATGCAATG-------TGCCCC----------------TCTTTGAG Fnj7405_2 CCCGCGATACGA--TTTTTTTTTTTTTT------CGG-----------TC Fnj7409_2 CCCGCGATACGA--TTTTTTTTTTTTTT------CGG-----------TC Fnj7402_2 CCCGCGATACGA--TTTTTTTTTTTTTT------CGG-----------TC Neotyphodium_australiense_937_2 CCCGCGATACGA--TTTTTTTTTTTTTTTT----CGG-----------TC Neotyphodium_chisosum_134_3 CCCGCGATACGAGTTTTTTTTTTTTTTTTT----CGG-----------TC Epichloe_typhina_ATCC201669 CCCGCGATACGAGTTTTTTTTTTTTTTT------CGG-----------TC Neotyphodium_tembladerae_1169_2 CCCGCGATACGAAATTTTTTTTTTTTTTT-----CGG-----------TC Neotyphodium_tembladerae_4055_2 CCCGCGATACGAAATTTTTTTTTTTTTTT-----CGG-----------TC Epichloe_liyangensis_Ply9101_2 CCCGCGATACGAAATTTTTTTTTTTTTTT-----CGG-----------TC Epichloe_liyangensis_Ply9102_2 CCCGCGATACGAAATTTTTTTTTTTTTTT-----CGG-----------TC Neotyphodium_huerfanum_ATCC64040 CCCGCGATACGAAAATTTTTTTTTTTTT------CGG-----------TC Epichloe_typhina_ATCC201667 CCCGCGATACGAAATTTTTTTTTTT---------CGG-----------TC Neotyphodium_typhinum_var._canariense_989 CCCGCGATACG--ATTTTTTTTTTTT--------CGG-----------TC Epichloe_clarkii_ATCC200742 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Epichloe_clarkii_ATCC200741 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Epichloe_typhina_ATCC200740 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Epichloe_typhina_ATCC200738 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Epichloe_typhina_E432 CCCGCGATACGATTTTTTTTTTTTTTT-------CGG-----------TC Epichloe_typhina_ATCC200851 CCCGCGATACGAATTTTTTTTTTTTTTT------TGG-----------TC Epichloe_typhina_ATCC201666 CCCGCGATACGAATTTTTTTTTTTTTTT------TGG-----------TC Epichloe_sylvatica_ATCC200748 CCCGCGATACGAAATTTTTTTTTTTTT-------CGG-----------TC Epichloe_typhina_ATCC200739 ACCGCGATACGAA--TTTTTTTTTTTT-------CGG-----------TC Epichloe_sylvatica_ATCC200751 CCCGCGATACGAAATTTTTTTTTTTTT-------CAG-----------TC Neotyphodium_melicicola_827 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Neotyphodium_aotearoae_829 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Epichloe_festucae_ATCC201550 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Epichloe_festucae_ATCC90661 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Neotyphodium_lolii_135 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Neotyphodium_coenophialum_e19_1 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Neotyphodium_tembladerae_1169_1 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Neotyphodium_tembladerae_4055_1 CCCGCGATACGAAATTTTTTTTTTTT--------CGG-----------TC Neotyphodium_australiense_937_1 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Neotyphodium_siegelii_e915_2 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Neotyphodium_coenophialum_e19_2 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Neotyphodium_occultans_992_2 CCCGCGATACGAAATTTTTTTTT-----------CGG-----------TC Epichloe_sp._9924 CCCGCGATACGAAATTTTTTTTT-----------CGG-----------TC Neotyphodium_stromatolongum_Cnj6611 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Neotyphodium_stromatolongum_Cnj6617 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Epichloe_baconii_ATCC76552 CCCGCGATACGAATTTTTTTTTTTTT--------CGG-----------TC Epichloe_amarillans_906 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Epichloe_amarillans_ATCC200743 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Neotyphodium_chisosum_134_2 CCCGCGATACGAAATTTTTTTTTT----------CGG-----------TC Epichloe_baconii_ATCC200745 CCCGCGATACGAAATTTTTTTTT-----------CGG-----------TC Epichloe_glyceriae_ATCC200747 CCCGCGATTCGAATTTTTTTTTTTTTCGG-------------------TC Epichloe_glyceriae_ATCC200755 CCCGCGATTCGAATTTTTTTTTTTTTCGG-------------------TC Neotyphodium_gansuense_var._inebrians_817 GCCGCCATTTGATTTTTTTTTTTTTTTTGG----GGGGGGGGGGGGGCTC Neotyphodium_gansuense_var._inebrians_818 GCCGCCATTTGATTTTTTTTTTTTTTTTGG----GGGGGGGGGGGG-CTC Epichloe_brachyelytri_ATCC200752 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Epichloe_brachyelytri_ATCC201561 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Epichloe_elymi_ATCC200850 CCCGCGATACGAATTTTTTTTTTTTTTT------CGG-----------TC Epichloe_elymi_ATCC201554 CCCGCGATACGAATTTTTTTTTTTTTT-------CGG-----------TC Epichloe_bromicola_9633 CCCGCGATACGAACTTTTTTTTTTTTT-------CGG-----------TC Neotyphodium_occultans_992_1 CCCGCGATACGAACTTTTTTTTTTT---------CGG-----------TC Epichloe_bromicola_9630 CCCGCGATACGAACTTTTTTTTTTT---------CGG-----------TC Epichloe_yangzii_Rnj3302 CCCGCGATACGAACTTTTTTTTTTTTTTT-----CGG-----------CC Neotyphodium_uncinatum_e167 CCCGCGATACGAACTTTTTTTTTTTTTTT-----CGG-----------TC Neotyphodium_siegelii_e915_1 CCCGCGATACGAACTTTTTTTTTTTTTTTTTTTTCGG-----------TC Neotyphodium_chisosum_134_1 CCCGCGATACGAATATTTTTTTTT----------CGG-----------TC Neotyphodium_sinicum_Rts2102_1 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Neotyphodium_sinofestucae_Fnj4602_1 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Fnj7409_1 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Fnj7405_1 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Fnj7402_1 CCCGCGATACGAATTTTTTTTTT-----------CGG-----------TC Neotyphodium_sinofestucae_Fnj6606_1 CCCGCGATACGAATTTTTTTTTTTT---------CGG-----------TC Neotyphodium_sinicum_Rts2102_2 CCCGCGATACGATTTTTTTTTTTTTTTT------CGG-----------TC Neotyphodium_sinofestucae_Fnj6606_2 CCCGCGATACGATTTTTTTTTTTTTTTT------CGG-----------TC Neotyphodium_sinofestucae_Fnj4602_2 CCCGCGATACGATTTTTTTTTTTTTTT-------CGG-----------TC Neotyphodium_sinicum_Rxy6106_2 CCCGCGATACGATTTTTTTTTTTTTTTT------CGG-----------TC Epichloe_liyangensis_Ply9102_1 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Neotyphodium_sinicum_Rxy6106_1 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Epichloe_yangzii_Rnj4301 CCCGCGATACGAACTTTTTTTTCTTT--------CGG-----------TC Epichloe_yangzii_Rnj4201 CCCGCGATACGAACTTTTTTTTTTTTTTT-----CGG-----------CC Epichloe_liyangensis_Ply9101_1 CCCGCGATACGAATTTTTTTTTTT----------CGG-----------TC Claviceps_purpurea_ATCC20102 GCAG-GACTCGAAAAAAATTCTTCAGCCG-----TGGGG--------CTC Fnj7405_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Fnj7409_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Fnj7402_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_australiense_937_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_chisosum_134_3 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC201669 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CATCTCTCAACCCGTCACTGG Neotyphodium_tembladerae_1169_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_tembladerae_4055_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_liyangensis_Ply9101_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_liyangensis_Ply9102_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_huerfanum_ATCC64040 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC201667 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTTAACCCGTCACTGG Neotyphodium_typhinum_var._canariense_989 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_clarkii_ATCC200742 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_clarkii_ATCC200741 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC200740 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC200738 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_E432 GCGGGGCTCAGTTTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC200851 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC201666 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_sylvatica_ATCC200748 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_typhina_ATCC200739 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_sylvatica_ATCC200751 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_melicicola_827 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACTTCTCAACCCGTCACTGG Neotyphodium_aotearoae_829 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACTTCTCAACCCGTCACTGG Epichloe_festucae_ATCC201550 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCT-TCAACCCGTCACTGG Epichloe_festucae_ATCC90661 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCT-TCAACCCGTCACTGG Neotyphodium_lolii_135 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_coenophialum_e19_1 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_tembladerae_1169_1 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_tembladerae_4055_1 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_australiense_937_1 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_siegelii_e915_2 GCGGGGCTCAGTATGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_coenophialum_e19_2 GCGGGGCTCAGTCTGACTCTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_occultans_992_2 GCGGGGCTCAGTCTGACTCTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_sp._9924 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_stromatolongum_Cnj6611 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAATCCGTCACTGG Neotyphodium_stromatolongum_Cnj6617 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAATCCGTCACTGG Epichloe_baconii_ATCC76552 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_amarillans_906 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_amarillans_ATCC200743 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_chisosum_134_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_baconii_ATCC200745 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_glyceriae_ATCC200747 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGT Epichloe_glyceriae_ATCC200755 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGT Neotyphodium_gansuense_var._inebrians_817 TCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTC--AACCCCTCACTGG Neotyphodium_gansuense_var._inebrians_818 TCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTC--AACCCCTCACTGG Epichloe_brachyelytri_ATCC200752 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTTG Epichloe_brachyelytri_ATCC201561 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTTG Epichloe_elymi_ATCC200850 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCTACCCGTCACTGG Epichloe_elymi_ATCC201554 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCTACCCGTCACTGG Epichloe_bromicola_9633 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_occultans_992_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_bromicola_9630 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_yangzii_Rnj3302 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_uncinatum_e167 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_siegelii_e915_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_chisosum_134_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_sinicum_Rts2102_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CTCCTCTCAACCCGTCACTGG Neotyphodium_sinofestucae_Fnj4602_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Fnj7409_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCATCACTGG Fnj7405_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Fnj7402_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_sinofestucae_Fnj6606_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_sinicum_Rts2102_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CGCCTCTCAACCCGTCACTGG Neotyphodium_sinofestucae_Fnj6606_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_sinofestucae_Fnj4602_2 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Neotyphodium_sinicum_Rxy6106_2 GCGGGGCTCAGTCTGACTTTTGGTGTGG-CACCTCTCAACCCGTCACTGG Epichloe_liyangensis_Ply9102_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CTCCTCTCAACCCGTCACTGG Neotyphodium_sinicum_Rxy6106_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CTCCTCTCAACCCGTCACTGG Epichloe_yangzii_Rnj4301 GCGGGGCTCAGTCTGACTTTTGGTGGGGGCACCTCTCAACCCGTCACTGG Epichloe_yangzii_Rnj4201 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CACCTCTCAACCCGTCACTGG Epichloe_liyangensis_Ply9101_1 GCGGGGCTCAGTCTGACTTTTGGTGGGG-CTCCTCTCAACCCGTCACTGG Claviceps_purpurea_ATCC20102 ACCCTCTCATGTCTGACTCGCCGAGGCGGGGTGTCTCCACCTACC-CCAA Fnj7405_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Fnj7409_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Fnj7402_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Neotyphodium_australiense_937_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Neotyphodium_chisosum_134_3 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Epichloe_typhina_ATCC201669 TCT-GTGCTAGA-GACGCAAACGAGAGA---AATAACATG-----ACATT Neotyphodium_tembladerae_1169_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Neotyphodium_tembladerae_4055_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_liyangensis_Ply9101_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_liyangensis_Ply9102_2 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Neotyphodium_huerfanum_ATCC64040 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_ATCC201667 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Neotyphodium_typhinum_var._canariense_989 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_clarkii_ATCC200742 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_clarkii_ATCC200741 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_ATCC200740 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_ATCC200738 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_E432 TCT-GTGCTAGA-GACGCAAACGAGAGA---TACAACATG-----ACATT Epichloe_typhina_ATCC200851 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_ATCC201666 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_sylvatica_ATCC200748 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_typhina_ATCC200739 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Epichloe_sylvatica_ATCC200751 TCT-GTGCTAGA-GACGCAAACGAGAGA---TATAACATG-----ACATT Neotyphodium_melicicola_827 TCT-GAGCTAGA-GACGCAAACGAGAGA---CATAACATG-----ACATT Neotyphodium_aotearoae_829 TCT-GAGCTAGA-GACGCAAACGAGAGA---CATAACATG-----ACATT Epichloe_festucae_ATCC201550 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Epichloe_festucae_ATCC90661 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Neotyphodium_lolii_135 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGA------------TT Neotyphodium_coenophialum_e19_1 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Neotyphodium_tembladerae_1169_1 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Neotyphodium_tembladerae_4055_1 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Neotyphodium_australiense_937_1 TCTTGAGCTAAAAAACGCAAACGAGAAA-GACATGACATG-----ACATT Neotyphodium_siegelii_e915_2 TCTTGAGCTAAAAAACGCAAACGAGAAAAGACATGACATG-----ACATT Neotyphodium_coenophialum_e19_2 TCTTGAGCTAGAAGACGCAAACAAGAGA-GACATGACATG-----ACATT Neotyphodium_occultans_992_2 TCTTGAGCTAGAAGACGCAAACAAGAGA-GACATGACATG-----ACATT Epichloe_sp._9924 TCTTGAGCTAGAAGACGCAAACGGGAGA-GACATGACATG-----ACTTG Neotyphodium_stromatolongum_Cnj6611 TCTTGAGCTAGAAGACGCAAAT--GAGA-GACATGACATG-----ACATT Neotyphodium_stromatolongum_Cnj6617 TCTTGAGCTAGAAGACGCAAAT--GAGA-GACATGACATG-----ACATT Epichloe_baconii_ATCC76552 TCTTGAGCTTGAAGACGCAAACGAGAGA-GACAGAACATG-----ACATT Epichloe_amarillans_906 TCTTGGGCTAGAAGACGCAAACGAGAGA-GACATGACATG-----ACATT Epichloe_amarillans_ATCC200743 TCTTGAGCTAGAAGACGCAAACGAGAGA-GACATGACATG-----ACATT Neotyphodium_chisosum_134_2 TCTTGAGCTAGAAGACGCAAACGAGAGA-GACATGACATG-----ACATT Epichloe_baconii_ATCC200745 TCT-AAGCTAGAAGACGCAAACGAGAGA---CATGACATG-----ACATT Epichloe_glyceriae_ATCC200747 TAT-GAGCTAGA-GACGCAAACGAGAGA-GACATGACATGGCATGACATT Epichloe_glyceriae_ATCC200755 TAT-GAGCTAGA-GACGCAAACGAGAGA-GACATGACATGGCATGACATT Neotyphodium_gansuense_var._inebrians_817 TCT-GGGCTAGA-GACGCAAACGAGAGA-GACGTGACAGG-----ACATT Neotyphodium_gansuense_var._inebrians_818 TCT-GGGCTAGA-GACGCAAACGAGAGA-GACGTGACAGG-----ACATT Epichloe_brachyelytri_ATCC200752 GTCTGAGCTAGA-GACGCAAACGAGAGA-GACATGACATG-----ACATT Epichloe_brachyelytri_ATCC201561 GTCTGAGCTAGA-GACGCAAACGAGAGA-GACATGACATG-----ACATT Epichloe_elymi_ATCC200850 TCT-AAGCTAGA-GACGCAAACGAGAGA-GACATGACATG-----GGATT Epichloe_elymi_ATCC201554 TCT-AAGCTAGA-GACGCAAACGAGAGA-GACATGACATG-----GGATT Epichloe_bromicola_9633 TCT-AAGCTAGAGACCGCAAACGAGAGA-GTCATGACATG-----ACATT Neotyphodium_occultans_992_1 TCT-AAGCTAGAGAC-GCAAACGAGA---GTCATGACATG-----ACATT Epichloe_bromicola_9630 TCT-AAGCTAGAGACCGCAAACGAGAGA-GTCATGACATG-----ACATT Epichloe_yangzii_Rnj3302 TCT-AAGCTAGAGAC-GCAAACGAGAGA-GTCATGACATG-----ACATT Neotyphodium_uncinatum_e167 T?T-AAGCTAGAGAC-GCAAACGAGAGA-GTCATGACATG-----ACATT Neotyphodium_siegelii_e915_1 TCT-AAGCTAGAGAC-GCAAACGAGAGA-GTCATGACATG-----ACATT Neotyphodium_chisosum_134_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Neotyphodium_sinicum_Rts2102_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Neotyphodium_sinofestucae_Fnj4602_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Fnj7409_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Fnj7405_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Fnj7402_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Neotyphodium_sinofestucae_Fnj6606_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Neotyphodium_sinicum_Rts2102_2 TCT-GTGCTAGA-GACGCAAACGAGAGA-A--ATAACATG-----ACATT Neotyphodium_sinofestucae_Fnj6606_2 TCT-GTGCTAGA-GACGCAAACGAGAGA-A--ATAACATG-----ACATT Neotyphodium_sinofestucae_Fnj4602_2 TCT-GTGCTAGA-GACGCAAACGAGAGA-A--ATAACATG-----ACATT Neotyphodium_sinicum_Rxy6106_2 TCT-GTGCTAGA-GACGCAAGCGAGAGA-A--ATAACATG-----ACATT Epichloe_liyangensis_Ply9102_1 TCT-AAGCTAGA-GGCGCAAACGAGAGA-GGCATGACATG-----ACATT Neotyphodium_sinicum_Rxy6106_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Epichloe_yangzii_Rnj4301 TCT-AAGCTAGA-GACGCAAACGAGAGA-GTCATGACATGACATGACATT Epichloe_yangzii_Rnj4201 TCT-AAGCTAGA-GACGCAAACGAGAGA-GTCATGACATG-----ACATT Epichloe_liyangensis_Ply9101_1 TCT-AAGCTAGA-GACGCAAACGAGAGA-GGCATGACATG-----ACATT Claviceps_purpurea_ATCC20102 TCCGTCCGGCGAGCATGGAATTGATCGC---TGCGACATCTATC--AATG Fnj7405_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Fnj7409_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Fnj7402_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Neotyphodium_australiense_937_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Neotyphodium_chisosum_134_3 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Epichloe_typhina_ATCC201669 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Neotyphodium_tembladerae_1169_2 CGCGTGACCTCCCA------------------ATAAATT--GTGATGACA Neotyphodium_tembladerae_4055_2 CGCGTGACCTCCCA------------------ATAAATT--GTGATGACA Epichloe_liyangensis_Ply9101_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Epichloe_liyangensis_Ply9102_2 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Neotyphodium_huerfanum_ATCC64040 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Epichloe_typhina_ATCC201667 CGCGTGACCTCCCA------------------AAAAATT--GTGATGACA Neotyphodium_typhinum_var._canariense_989 CGCGTGACCTCCCA------------------AAAAACT--GTGATGACA Epichloe_clarkii_ATCC200742 CGCGTGACCTCCCA------------------AAAAAAT-TGTGATGACA Epichloe_clarkii_ATCC200741 CGCGTGACCTCCCA------------------AAAAAAT-TGTGATGACA Epichloe_typhina_ATCC200740 CGCGTGATCTCCCA------------------AAAAAAA-TGTGATGACA Epichloe_typhina_ATCC200738 CGCGTGATCTCCCA------------------AAAAAAAATGTGATGACA Epichloe_typhina_E432 CGCGTGATCTCCCA------------------AAAAAAA-TGTGATGACA Epichloe_typhina_ATCC200851 CGCGTGACCTCCCA------------------AAAAAAT-TGTGATGACA Epichloe_typhina_ATCC201666 CGCGTGACCTCCCA------------------AAAAAAT-TGTGATGACA Epichloe_sylvatica_ATCC200748 CGCGTGACCTCCCA------------------AAAAAAATTGTGATGACA Epichloe_typhina_ATCC200739 CGCGTGACGTCCCA------------------AAAAAA-TTGTGATGACA Epichloe_sylvatica_ATCC200751 CGCGTGACCTCCCA------------------AAAAAA-TTGTGATGACA Neotyphodium_melicicola_827 CGCGTGACCTCCCA------------------AAAAAATCGTTGATGACA Neotyphodium_aotearoae_829 CGCGTGACCTCCCA------------------AAAAAATTGTTGATGACA Epichloe_festucae_ATCC201550 CGCGTGGCCCACCTCTCCCCCCCCCCCCC---AA-CAAATTGTGATAAAA Epichloe_festucae_ATCC90661 CGCGTGGCCCACCTCTCCCCCCCCCCCCC---AA-CAAATTGTGATAAAA Neotyphodium_lolii_135 CGCGTGGCCCACCTCTCCCCCCCCCCCCC---AAACAAATTGTGATAAAA Neotyphodium_coenophialum_e19_1 CGCGTGGCCCACCTCTCCCCCCCCCCCCA---A--CAAATTGTGATAAAA Neotyphodium_tembladerae_1169_1 CGCGTGGCCCACCTCTCCCCCCCCCCC-----AA-CAAATTGTGATAAAA Neotyphodium_tembladerae_4055_1 CGCGTGGCCCACCTCTCCCCCCCCCCC-----AA-CAAATTGTGATAAAA Neotyphodium_australiense_937_1 CGCGTGGCCCACCTCTCCCCCCCCCCCT-----AACAAATTGTGATAAAA Neotyphodium_siegelii_e915_2 CGCTTGGCCCACCTCTCCCCCCCCCCTCCCCCAAACAAATTGTGATAAAA Neotyphodium_coenophialum_e19_2 CGCGGGGCCCCCCCAA----------------AAAAAAATTGTGATAAAA Neotyphodium_occultans_992_2 CGCGGGGGCCCCCCAA----------------AAAAAA-TTGTGATAAAA Epichloe_sp._9924 CGCGTGGCCCCCC-------------------AAAAAAATTGTGATAAAC Neotyphodium_stromatolongum_Cnj6611 GGCGTGGCCGCCCC------------------AAAAAAATTGTGATAAAA Neotyphodium_stromatolongum_Cnj6617 GGCGTGGCCGCCCC------------------AAAAAAATTGTGATAAAA Epichloe_baconii_ATCC76552 CGCGTGGCCCCCCA------------------AAAAAAATTGCGATAAAA Epichloe_amarillans_906 CGCGTGGCCCCCCAA-----------------AAAAAA-TTGTGATTAAA Epichloe_amarillans_ATCC200743 CGCGTGGCCCCCCAA-----------------AAAAAA-TTGTGATTAAA Neotyphodium_chisosum_134_2 CGCGTGGCCCCCCAA-----------------AAAAAA-TTGTGATTAAA Epichloe_baconii_ATCC200745 CGCGTGGCCTCCCAA-----------------AAAAAAATTGTGATGACA Epichloe_glyceriae_ATCC200747 CGCGTGGCCTCCCAAAA-----------AAAAA------CTGTGATGACA Epichloe_glyceriae_ATCC200755 CGCGTGGCCTCCCAAAA-----------AAAAA------CTGTGATGACA Neotyphodium_gansuense_var._inebrians_817 CGCGTGGCCTTCCAAAA-----------AAAAAAAAAAATTGTGATGACG Neotyphodium_gansuense_var._inebrians_818 CGCGTGGCCTTCCAAAA-----------AAAAAAAAAAATTGTGATGACG Epichloe_brachyelytri_ATCC200752 CGCGTGACCTCCCA------------------AAAAAAATTGTGATGACA Epichloe_brachyelytri_ATCC201561 CGCGTGGCCTCCCA------------------AAAAAAATTGTGATGACA Epichloe_elymi_ATCC200850 CGCGTGGCCTCCCA------------------AAAAAAACTGTGATGACA Epichloe_elymi_ATCC201554 CGCGTGGCCTCCCA------------------AAAAAAACTGTGATGACA Epichloe_bromicola_9633 CGCGTGCCCTCCCAAA----------------AAAAAA-CTGTGATGACA Neotyphodium_occultans_992_1 CGCGTGCCCTCCCAAA----------------AAAAAA-CTGTGATGACA Epichloe_bromicola_9630 CGCGTGCCCTCCCAAA----------------AAAAAA-ATGTGATGACA Epichloe_yangzii_Rnj3302 CGCGTGCCCTCCCAAA----------------AAAAAAACTGTGATGACA Neotyphodium_uncinatum_e167 CGCGTGCCCTCCCAAA----------------AAAAAAACTGTGATGACA Neotyphodium_siegelii_e915_1 CGCGTGCCCTCCCAAA----------------AAAAAA-CTGTGATGACA Neotyphodium_chisosum_134_1 CGCGTGCCCTCCCA------------------AAAAAAATTGTGATGACA Neotyphodium_sinicum_Rts2102_1 CGCGTGCCCTCCCAAA----------------AAAAAAATTGTGATGACA Neotyphodium_sinofestucae_Fnj4602_1 CGCGTGCCCTCCCCAAA---------------AAAAAAATTGTGATGACA Fnj7409_1 CGCGTGCCCTCCCCAAA---------------AAAAAAATTGTGATGACA Fnj7405_1 CGCGTGCCCTCCCCAAA---------------AAAAAAATTGTGATGACA Fnj7402_1 CGCGTGCCCTCCCCAAA---------------AAAAAAATTGTGATGACA Neotyphodium_sinofestucae_Fnj6606_1 CGCGTGCCCTCCCCAAA---------------AAAAAAATTGTGATGACA Neotyphodium_sinicum_Rts2102_2 CGCGTGACCTCCCAA-----------------AAAA---TTGTGATGACA Neotyphodium_sinofestucae_Fnj6606_2 CGCGTGACCTCCCAA-----------------AAAA---TTGTGATGACA Neotyphodium_sinofestucae_Fnj4602_2 CGCGTGACCTCCCAA-----------------AAAA---TTGTGATGACA Neotyphodium_sinicum_Rxy6106_2 CGCGTGACCTCCCAA-----------------AAAA---TTGTGATGACA Epichloe_liyangensis_Ply9102_1 CGCGTGCCCTCCCAA-----------------AAAAAAATTGTGATGACA Neotyphodium_sinicum_Rxy6106_1 CGCGTGCCCTCCCAA-----------------AAAAAAATTGTGATGACA Epichloe_yangzii_Rnj4301 CGCGTGCCCTCCCCAAA--------------AAAAAAAACTGTGATGACA Epichloe_yangzii_Rnj4201 CGCGTGCCCTCCCAAA----------------AAAAAAACTGTGATGACA Epichloe_liyangensis_Ply9101_1 CGCGTGCCCTCCCAA-----------------AAAAAAATTGTGAAGACA Claviceps_purpurea_ATCC20102 AGCATGGCTGCGCAGAAGATGAAAGTC-----CACACACATACGACATTG Fnj7405_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Fnj7409_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Fnj7402_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_australiense_937_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_chisosum_134_3 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC201669 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_tembladerae_1169_2 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_tembladerae_4055_2 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_liyangensis_Ply9101_2 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_liyangensis_Ply9102_2 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_huerfanum_ATCC64040 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC201667 AATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_typhinum_var._canariense_989 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_clarkii_ATCC200742 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_clarkii_ATCC200741 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC200740 AATCACTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC200738 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_E432 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC200851 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC201666 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_sylvatica_ATCC200748 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_typhina_ATCC200739 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_sylvatica_ATCC200751 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_melicicola_827 AATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_aotearoae_829 AATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_festucae_ATCC201550 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_festucae_ATCC90661 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_lolii_135 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_coenophialum_e19_1 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_tembladerae_1169_1 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_tembladerae_4055_1 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_australiense_937_1 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_siegelii_e915_2 AATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_coenophialum_e19_2 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_occultans_992_2 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_sp._9924 AATCACTGACTTGCCTCCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_stromatolongum_Cnj6611 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAAGG Neotyphodium_stromatolongum_Cnj6617 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAAGG Epichloe_baconii_ATCC76552 AATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_amarillans_906 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_amarillans_ATCC200743 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_chisosum_134_2 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_baconii_ATCC200745 AATTACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_glyceriae_ATCC200747 AATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGC Epichloe_glyceriae_ATCC200755 AATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGC Neotyphodium_gansuense_var._inebrians_817 AATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_gansuense_var._inebrians_818 AATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_brachyelytri_ATCC200752 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_brachyelytri_ATCC201561 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_elymi_ATCC200850 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_elymi_ATCC201554 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_bromicola_9633 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_occultans_992_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTTGGAAAGGG Epichloe_bromicola_9630 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_yangzii_Rnj3302 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_uncinatum_e167 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAAGG Neotyphodium_siegelii_e915_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_chisosum_134_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinicum_Rts2102_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinofestucae_Fnj4602_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Fnj7409_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Fnj7405_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Fnj7402_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinofestucae_Fnj6606_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinicum_Rts2102_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinofestucae_Fnj6606_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinofestucae_Fnj4602_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinicum_Rxy6106_2 AATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_liyangensis_Ply9102_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Neotyphodium_sinicum_Rxy6106_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_yangzii_Rnj4301 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_yangzii_Rnj4201 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Epichloe_liyangensis_Ply9101_1 AATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGG Claviceps_purpurea_ATCC20102 --TCGCTGACCTGT-TTTAAACTATAGGAAGCCGCCGAACTCGGAAAGGG Fnj7405_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGCGAGC Fnj7409_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGCGAGC Fnj7402_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGCGAGC Neotyphodium_australiense_937_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_chisosum_134_3 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC201669 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_tembladerae_1169_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_tembladerae_4055_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_liyangensis_Ply9101_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_liyangensis_Ply9102_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_huerfanum_ATCC64040 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC201667 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_typhinum_var._canariense_989 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_clarkii_ATCC200742 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_clarkii_ATCC200741 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC200740 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC200738 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_E432 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC200851 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC201666 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_sylvatica_ATCC200748 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_typhina_ATCC200739 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_sylvatica_ATCC200751 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_melicicola_827 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_aotearoae_829 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_festucae_ATCC201550 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_festucae_ATCC90661 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_lolii_135 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_coenophialum_e19_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_tembladerae_1169_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_tembladerae_4055_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_australiense_937_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_siegelii_e915_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_coenophialum_e19_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_occultans_992_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_sp._9924 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_stromatolongum_Cnj6611 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_stromatolongum_Cnj6617 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_baconii_ATCC76552 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_amarillans_906 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_amarillans_ATCC200743 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_chisosum_134_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_baconii_ATCC200745 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_glyceriae_ATCC200747 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_glyceriae_ATCC200755 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_gansuense_var._inebrians_817 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_gansuense_var._inebrians_818 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_brachyelytri_ATCC200752 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_brachyelytri_ATCC201561 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_elymi_ATCC200850 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_elymi_ATCC201554 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_bromicola_9633 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_occultans_992_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_bromicola_9630 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_yangzii_Rnj3302 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_uncinatum_e167 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_siegelii_e915_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_chisosum_134_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinicum_Rts2102_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinofestucae_Fnj4602_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Fnj7409_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Fnj7405_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Fnj7402_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinofestucae_Fnj6606_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinicum_Rts2102_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinofestucae_Fnj6606_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinofestucae_Fnj4602_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinicum_Rxy6106_2 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_liyangensis_Ply9102_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Neotyphodium_sinicum_Rxy6106_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_yangzii_Rnj4301 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_yangzii_Rnj4201 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Epichloe_liyangensis_Ply9101_1 TTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Claviceps_purpurea_ATCC20102 TTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGC Fnj7405_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7409_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7402_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_australiense_937_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_chisosum_134_3 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC201669 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_tembladerae_1169_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_tembladerae_4055_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_liyangensis_Ply9101_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_liyangensis_Ply9102_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_huerfanum_ATCC64040 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC201667 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_typhinum_var._canariense_989 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_clarkii_ATCC200742 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_clarkii_ATCC200741 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC200740 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC200738 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_E432 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC200851 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC201666 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_sylvatica_ATCC200748 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_typhina_ATCC200739 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_sylvatica_ATCC200751 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_melicicola_827 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_aotearoae_829 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_festucae_ATCC201550 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_festucae_ATCC90661 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_lolii_135 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_coenophialum_e19_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_tembladerae_1169_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_tembladerae_4055_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_australiense_937_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_siegelii_e915_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_coenophialum_e19_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_occultans_992_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_sp._9924 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_stromatolongum_Cnj6611 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTTCCAAGTAC Neotyphodium_stromatolongum_Cnj6617 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTTCCAAGTAC Epichloe_baconii_ATCC76552 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_amarillans_906 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_amarillans_ATCC200743 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_chisosum_134_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCTCAAGTAC Epichloe_baconii_ATCC200745 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_glyceriae_ATCC200747 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_glyceriae_ATCC200755 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_gansuense_var._inebrians_817 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_gansuense_var._inebrians_818 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_brachyelytri_ATCC200752 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_brachyelytri_ATCC201561 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_elymi_ATCC200850 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_elymi_ATCC201554 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_bromicola_9633 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_occultans_992_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_bromicola_9630 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_yangzii_Rnj3302 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_uncinatum_e167 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_siegelii_e915_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_chisosum_134_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinicum_Rts2102_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinofestucae_Fnj4602_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7409_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7405_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7402_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinofestucae_Fnj6606_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinicum_Rts2102_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinofestucae_Fnj6606_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinofestucae_Fnj4602_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinicum_Rxy6106_2 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_liyangensis_Ply9102_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Neotyphodium_sinicum_Rxy6106_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_yangzii_Rnj4301 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_yangzii_Rnj4201 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Epichloe_liyangensis_Ply9101_1 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Claviceps_purpurea_ATCC20102 GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTAC Fnj7405_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Fnj7409_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Fnj7402_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_australiense_937_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_chisosum_134_3 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Epichloe_typhina_ATCC201669 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_tembladerae_1169_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Neotyphodium_tembladerae_4055_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Epichloe_liyangensis_Ply9101_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Epichloe_liyangensis_Ply9102_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Neotyphodium_huerfanum_ATCC64040 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Epichloe_typhina_ATCC201667 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Neotyphodium_typhinum_var._canariense_989 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTA Epichloe_clarkii_ATCC200742 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTA Epichloe_clarkii_ATCC200741 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTA Epichloe_typhina_ATCC200740 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTA Epichloe_typhina_ATCC200738 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTA Epichloe_typhina_E432 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTA Epichloe_typhina_ATCC200851 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTA Epichloe_typhina_ATCC201666 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTA Epichloe_sylvatica_ATCC200748 TATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTCT-ATCGA Epichloe_typhina_ATCC200739 TATGTCACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTAT-ATCTA Epichloe_sylvatica_ATCC200751 TATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTCT-ATCTA Neotyphodium_melicicola_827 TATGTCACCGTCATTGGTAAGCCTTGGTCGACATATTAGACTCT-ATCTA Neotyphodium_aotearoae_829 TATGTCACCGTCATTGGTAAGCCTTGGTCGACATATTAGACTCT-ATCTA Epichloe_festucae_ATCC201550 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Epichloe_festucae_ATCC90661 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Neotyphodium_lolii_135 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Neotyphodium_coenophialum_e19_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Neotyphodium_tembladerae_1169_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Neotyphodium_tembladerae_4055_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAA Neotyphodium_australiense_937_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAA Neotyphodium_siegelii_e915_2 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAA Neotyphodium_coenophialum_e19_2 TATGTCACTGTCATTGGTAAGCCTTGGTCGACACGTTAGACTCT-ACCAA Neotyphodium_occultans_992_2 TATGTCACTGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAA Epichloe_sp._9924 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTGT-ACCAA Neotyphodium_stromatolongum_Cnj6611 TATGTCACCGTCATTGGTAAGTCTTGGTCGATGCATTAGACTCT-ATCAA Neotyphodium_stromatolongum_Cnj6617 TATGTCACCGTCATTGGTAAGTCTTGGTCGATGCATTAGACTCT-ATCAA Epichloe_baconii_ATCC76552 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAA Epichloe_amarillans_906 TATGTCACCGTCATTGGTAAGCCTTGGTCGATGCATTAGACTCT-TCTTA Epichloe_amarillans_ATCC200743 TATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTCT-TCTCA Neotyphodium_chisosum_134_2 TATGTCACCGTCATTGGTAAGCCTTGGTCGATGCACTAGACTCT-?TCAA Epichloe_baconii_ATCC200745 TATGTCACCGTCATTGGTAAGCCTTGGTCGATACACTAGACTCT-ATCAA Epichloe_glyceriae_ATCC200747 TTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAA Epichloe_glyceriae_ATCC200755 TTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAA Neotyphodium_gansuense_var._inebrians_817 TATGTCACCGTCATTGGTAAGCCTTGGTCGGCACATTATACTCTTATCAA Neotyphodium_gansuense_var._inebrians_818 TATGTCACCGTCATTGGTAAGCCTTGGTCGGCACATTATACTCTTATCAA Epichloe_brachyelytri_ATCC200752 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTA Epichloe_brachyelytri_ATCC201561 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTA Epichloe_elymi_ATCC200850 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAA Epichloe_elymi_ATCC201554 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAA Epichloe_bromicola_9633 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCTTATCAA Neotyphodium_occultans_992_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Epichloe_bromicola_9630 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Epichloe_yangzii_Rnj3302 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_uncinatum_e167 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_siegelii_e915_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_chisosum_134_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_sinicum_Rts2102_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_sinofestucae_Fnj4602_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Fnj7409_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Fnj7405_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Fnj7402_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_sinofestucae_Fnj6606_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_sinicum_Rts2102_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_sinofestucae_Fnj6606_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_sinofestucae_Fnj4602_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Neotyphodium_sinicum_Rxy6106_2 TATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTA Epichloe_liyangensis_Ply9102_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Neotyphodium_sinicum_Rxy6106_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Epichloe_yangzii_Rnj4301 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Epichloe_yangzii_Rnj4201 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Epichloe_liyangensis_Ply9101_1 TATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAA Claviceps_purpurea_ATCC20102 ATGGTCACTGTCATTGGTAAG--TTGATCGATGCACGA----TTGAATAA Fnj7405_2 CCCGATCTGTATCATTAACGCGCATCTATTA Fnj7409_2 CCCGATCTGTATCATTAACGCGCATCTATTA Fnj7402_2 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_australiense_937_2 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_chisosum_134_3 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC201669 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_tembladerae_1169_2 CCCGAT--GTATCATTAACGCGCATCTATTA Neotyphodium_tembladerae_4055_2 CCCGAT--GTATCATTAACGCGCATCTATTA Epichloe_liyangensis_Ply9101_2 CCCGAT--GTATCATTAACGCGCATCTATTA Epichloe_liyangensis_Ply9102_2 CCCGAT--GTATCATTAACGCGCATCTATTA Neotyphodium_huerfanum_ATCC64040 CCCGAT--GTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC201667 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_typhinum_var._canariense_989 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_clarkii_ATCC200742 CCCAATCTGTATCATTAACGCGCATCTATTA Epichloe_clarkii_ATCC200741 CCCAATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC200740 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC200738 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_E432 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC200851 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC201666 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_sylvatica_ATCC200748 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_typhina_ATCC200739 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_sylvatica_ATCC200751 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_melicicola_827 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_aotearoae_829 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_festucae_ATCC201550 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_festucae_ATCC90661 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_lolii_135 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_coenophialum_e19_1 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_tembladerae_1169_1 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_tembladerae_4055_1 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_australiense_937_1 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_siegelii_e915_2 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_coenophialum_e19_2 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_occultans_992_2 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_sp._9924 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_stromatolongum_Cnj6611 CCCGATCTGTATCATTAACGTGCATCTATTA Neotyphodium_stromatolongum_Cnj6617 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_baconii_ATCC76552 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_amarillans_906 CCCGATCTGCATCATTAACGTGCATCTATTA Epichloe_amarillans_ATCC200743 CCCGATCTGCATCATTAACGTGCATCTATTA Neotyphodium_chisosum_134_2 CCCGATCTGCATCAATAACGTGCATCTATTA Epichloe_baconii_ATCC200745 CCCGATCTGTATCATTAACGTGCATCTACTA Epichloe_glyceriae_ATCC200747 CCCGATCTGTATCATTAACGTACATATACTA Epichloe_glyceriae_ATCC200755 CCCGATCTGTATCATTAACGTACATATACTA Neotyphodium_gansuense_var._inebrians_817 CCCGATCTGTATCATTAACATGCATTTATTA Neotyphodium_gansuense_var._inebrians_818 CCCGATCTGTATCATTAACATGCATTTATTA Epichloe_brachyelytri_ATCC200752 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_brachyelytri_ATCC201561 CCCGATCTGTATCATTAACGTGCATCTATTA Epichloe_elymi_ATCC200850 CCCGATCTGTATCATTAACGTGCATCTTTTA Epichloe_elymi_ATCC201554 CCCGATCTGTATCATTAACGTGCATCTTTTA Epichloe_bromicola_9633 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_occultans_992_1 CCTGATCTGTATCACTAACGTGCATCTACTA Epichloe_bromicola_9630 CCTGATCTGTATCACTAACGTGCATCTACTA Epichloe_yangzii_Rnj3302 CCTGATCTGTATCACTAACGTGCATCTGCTA Neotyphodium_uncinatum_e167 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_siegelii_e915_1 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_chisosum_134_1 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_sinicum_Rts2102_1 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_sinofestucae_Fnj4602_1 CATGATCTGTATCACTAACGTGCATCTAC-- Fnj7409_1 CATGATCTGTATCACTAACGTGCATCTACTA Fnj7405_1 CATGATCTGTATCACTAACGTGCATCTACTA Fnj7402_1 CATGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_sinofestucae_Fnj6606_1 CATGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_sinicum_Rts2102_2 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_sinofestucae_Fnj6606_2 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_sinofestucae_Fnj4602_2 CCCGATCTGTATCATTAACGCGCATCTATTA Neotyphodium_sinicum_Rxy6106_2 CCCGATCTGTATCATTAACGCGCATCTATTA Epichloe_liyangensis_Ply9102_1 CCTGATCTGTATCACTAACGTGCATCTACTA Neotyphodium_sinicum_Rxy6106_1 CCTGATCTGTATCACTAACGTGCATCTACTA Epichloe_yangzii_Rnj4301 CCTGATCTGTATCACTAACGTGCATCTACTA Epichloe_yangzii_Rnj4201 CCTGATCTGTATCACTAACGTGCATCTGCTA Epichloe_liyangensis_Ply9101_1 CCTGATCTGTATCACTAACGTGCATCTACTA Claviceps_purpurea_ATCC20102 TTGGAATTGG--CATTAACTTTCTCCACACA ; END; BEGIN TREES; Title 'Trees from "tefA_SUBMIT.NXS.con"'; LINK Taxa = Taxa; TRANSLATE 1 Fnj7405_2, 2 Fnj7409_2, 3 Fnj7402_2, 4 Neotyphodium_australiense_937_2, 5 Neotyphodium_chisosum_134_3, 6 Epichloe_typhina_ATCC201669, 7 Neotyphodium_tembladerae_1169_2, 8 Neotyphodium_tembladerae_4055_2, 9 Epichloe_liyangensis_Ply9101_2, 10 Epichloe_liyangensis_Ply9102_2, 11 Neotyphodium_huerfanum_ATCC64040, 12 Epichloe_typhina_ATCC201667, 13 Neotyphodium_typhinum_var._canariense_989, 14 Epichloe_clarkii_ATCC200742, 15 Epichloe_clarkii_ATCC200741, 16 Epichloe_typhina_ATCC200740, 17 Epichloe_typhina_ATCC200738, 18 Epichloe_typhina_E432, 19 Epichloe_typhina_ATCC200851, 20 Epichloe_typhina_ATCC201666, 21 Epichloe_sylvatica_ATCC200748, 22 Epichloe_typhina_ATCC200739, 23 Epichloe_sylvatica_ATCC200751, 24 Neotyphodium_melicicola_827, 25 Neotyphodium_aotearoae_829, 26 Epichloe_festucae_ATCC201550, 27 Epichloe_festucae_ATCC90661, 28 Neotyphodium_lolii_135, 29 Neotyphodium_coenophialum_e19_1, 30 Neotyphodium_tembladerae_1169_1, 31 Neotyphodium_tembladerae_4055_1, 32 Neotyphodium_australiense_937_1, 33 Neotyphodium_siegelii_e915_2, 34 Neotyphodium_coenophialum_e19_2, 35 Neotyphodium_occultans_992_2, 36 Epichloe_sp._9924, 37 Neotyphodium_stromatolongum_Cnj6611, 38 Neotyphodium_stromatolongum_Cnj6617, 39 Epichloe_baconii_ATCC76552, 40 Epichloe_amarillans_906, 41 Epichloe_amarillans_ATCC200743, 42 Neotyphodium_chisosum_134_2, 43 Epichloe_baconii_ATCC200745, 44 Epichloe_glyceriae_ATCC200747, 45 Epichloe_glyceriae_ATCC200755, 46 Neotyphodium_gansuense_var._inebrians_817, 47 Neotyphodium_gansuense_var._inebrians_818, 48 Epichloe_brachyelytri_ATCC200752, 49 Epichloe_brachyelytri_ATCC201561, 50 Epichloe_elymi_ATCC200850, 51 Epichloe_elymi_ATCC201554, 52 Epichloe_bromicola_9633, 53 Neotyphodium_occultans_992_1, 54 Epichloe_bromicola_9630, 55 Epichloe_yangzii_Rnj3302, 56 Neotyphodium_uncinatum_e167, 57 Neotyphodium_siegelii_e915_1, 58 Neotyphodium_chisosum_134_1, 59 Neotyphodium_sinicum_Rts2102_1, 60 Neotyphodium_sinofestucae_Fnj4602_1, 61 Fnj7409_1, 62 Fnj7405_1, 63 Fnj7402_1, 64 Neotyphodium_sinofestucae_Fnj6606_1, 65 Neotyphodium_sinicum_Rts2102_2, 66 Neotyphodium_sinofestucae_Fnj6606_2, 67 Neotyphodium_sinofestucae_Fnj4602_2, 68 Neotyphodium_sinicum_Rxy6106_2, 69 Epichloe_liyangensis_Ply9102_1, 70 Neotyphodium_sinicum_Rxy6106_1, 71 Epichloe_yangzii_Rnj4301, 72 Epichloe_yangzii_Rnj4201, 73 Epichloe_liyangensis_Ply9101_1, 74 Claviceps_purpurea_ATCC20102; TREE con_50_majrule = (74:1.760955,(46:0.00368,47:0.003579)1.00:0.100863,(44:0.00422,45:0.007723)1.00:0.066071,(((((((1:0.004387,2:0.00458,3:0.004395)0.97:0.008548,4:0.004251,5:0.004278,6:0.01707,65:0.012723,66:0.004097,67:0.00432,68:0.012628)0.91:0.011849,(((7:0.004202,8:0.004261)0.99:0.008313,9:0.004083,10:0.004171,11:0.016961,12:0.008712)0.98:0.008785,13:0.008759)0.98:0.012422)0.99:0.01336,((14:0.004119,15:0.004463)1.00:0.017552,((16:0.012911,17:0.0090,18:0.016994)0.99:0.01346,(19:0.00411,20:0.004176)1.00:0.016884)1.00:0.018653)0.92:0.009632,(21:0.009937,22:0.030724,23:0.008574)1.00:0.01828)1.00:0.031018,(24:0.008118,25:0.004353)1.00:0.027392)0.99:0.051328,(((26:0.003703,27:0.003716,28:0.003732,29:0.009597,30:0.003857,31:0.007475,(32:0.008613,33:0.017519)0.51:0.007559)1.00:0.088951,((34:0.00867,35:0.012267)1.00:0.021503,36:0.039555,(37:0.004404,38:0.004431)1.00:0.057608,39:0.026606)0.87:0.013017)0.84:0.020288,(((40:0.010014,41:0.014405)0.99:0.022418,42:0.029148)1.00:0.027566,43:0.032718)0.58:0.0231)1.00:0.064384)0.81:0.015114,((48:0.012462,49:0.004321)0.99:0.025173,((50:0.004105,51:0.004313)0.94:0.026526,((((52:0.004262,53:0.012653,54:0.012579,55:0.009875,56:0.008013,57:0.004123)0.69:0.012117,72:0.011442)0.52:0.009278,71:0.016691)0.96:0.015519,58:0.008532,(59:0.004158,69:0.008249,70:0.004321,73:0.008447)1.00:0.01264,(60:0.012398,61:0.008164,62:0.00424,63:0.00424,64:0.004038)0.99:0.012359)0.96:0.038568)0.60:0.009407)0.63:0.008663)0.53:0.014111); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 581; END; BEGIN MRBAYES; Lset nst = 6 rates = gamma; Prset statefreqpr = fixed ( equal ); outgroup Claviceps_purpurea_ATCC20102; mcmcp ngen = 5000000 relburnin = yes burninfrac = 0.25 printfreq = 1000 samplefreq = 1000 nchains = 4 savebrlens = yes; mcmc; sumt; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 581; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 581; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4331342364790476505; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8259924691185754503; checksum 0 3475155476 null; endTell; getWindow; tell It; setResourcesState false false 214; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 598; setLocation -8 0; setFont SanSerif; setFontSize 10; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4331342364790476505 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4331342364790476505; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 502; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 531; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 531; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4331342364790476505 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 3862.1326468847426.5131478483454791061; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 531; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.interchange; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; stretchToggle off; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientRight; toggleCorners off; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(74:1.760955,(46:0.00368,47:0.003579)1.00:0.100863,(44:0.00422,45:0.007723)1.00:0.066071,(((((((1:0.004387,2:0.00458,3:0.004395)0.97:0.008548,66:0.004097,67:0.00432,68:0.012628,65:0.012723,4:0.004251,5:0.004278,6:0.01707)0.91:0.011849,(((7:0.004202,8:0.004261)0.99:0.008313,9:0.004083,10:0.004171,11:0.016961,12:0.008712)0.98:0.008785,13:0.008759)0.98:0.012422)0.99:0.01336,((14:0.004119,15:0.004463)1.00:0.017552,((16:0.012911,17:0.0090,18:0.016994)0.99:0.01346,(19:0.00411,20:0.004176)1.00:0.016884)1.00:0.018653)0.92:0.009632,(21:0.009937,22:0.030724,23:0.008574)1.00:0.01828)1.00:0.031018,(24:0.008118,25:0.004353)1.00:0.027392)0.99:0.051328,(((26:0.003703,27:0.003716,28:0.003732,29:0.009597,30:0.003857,31:0.007475,(32:0.008613,33:0.017519)0.51:0.007559)1.00:0.088951,((34:0.00867,35:0.012267)1.00:0.021503,36:0.039555,(37:0.004404,38:0.004431)1.00:0.057608,39:0.026606)0.87:0.013017)0.84:0.020288,(((40:0.010014,41:0.014405)0.99:0.022418,42:0.029148)1.00:0.027566,43:0.032718)0.58:0.0231)1.00:0.064384)0.81:0.015114,((48:0.012462,49:0.004321)0.99:0.025173,((50:0.004105,51:0.004313)0.94:0.026526,((((52:0.004262,53:0.012653,54:0.012579,55:0.009875,56:0.008013,57:0.004123)0.69:0.012117,72:0.011442)0.52:0.009278,71:0.016691)0.96:0.015519,58:0.008532,(73:0.008447,69:0.008249,70:0.004321,59:0.004158)1.00:0.01264,(60:0.012398,64:0.004038,62:0.00424,63:0.00424,61:0.008164)0.99:0.012359)0.96:0.038568)0.60:0.009407)0.63:0.008663)0.53:0.014111);'; useSuggestedSize on; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8259924691185754503 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 250; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 531; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;