#NEXUS
[written Mon Aug 24 21:37:59 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=10;
	TAXLABELS
		Thermoanaerobacter_ethanolicus_EGD52041.1 Thermoanaerobacter_siderophilus_EIW00248.1 'Caldanaerobacter subterraneus yonseiensis_ERM91250.1' 'Thermoanaerobacter wiegelii YP_004818833.1' 'Thermobrachium celere WP_018663245.1' 'Caloramator australicus WP_008908952.1' 'Thermococcus barophilus YP_004071064.1' Thermococcus_sp._AHF80262.1 'Pyrococcus yayanosii YP_004624105.1' 'Thermococcus onnurineus YP_002306880.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=120;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Thermoanaerobacter_ethanolicus_EGD52041.1             --------MIINVILGLVIFGLLLSFIRLVRSSSIESKVVAIDIMTTISSGLIVIFAFISDNGLFLDVALVYGILSFIGVVAIARYL------E-------GGI----------------
	Thermoanaerobacter_siderophilus_EIW00248.1            --------MIINVILGLVIFGLLLSFIRLVRSSSIESKVVAIDIMTTISSGLIVIFAFISDNGLFLDVALVYGILSFIGVVAIARYL------E-------GGI----------------
	'Caldanaerobacter subterraneus yonseiensis_ERM91250.1' --------MIINVILGLVIFGLLLSFIRLVRSSSIESKVVAIDIMTTISSGLIVIFAFISDNGLFLDVALVYGILSFIGVVAIARYL------E-------GGI----------------
	'Thermoanaerobacter wiegelii YP_004818833.1'          --------MIINVILGLVIFGLLLSFIRLVRSSSIESKVVAIDIMTTISSGLIVIFAFISDNGLFLDVALVYGI--YWGCSNSSLFR------R-------RNLVCSILDTFSCLLELFF
	'Thermobrachium celere WP_018663245.1'                ---------MFYVTIALIVLGMLLSIIRLVKGDSIESRVVAIDVLTTITSSLIIVFAFLTDNTLLIDVALVYGLLSFVGVVAVARYL------E-------GGI----------------
	'Caloramator australicus WP_008908952.1'              ---------MITFILVLSLLGMVLGIFRLIKGKSIESRVVAIDVLTTITSAIIVIFSFTNDNSLLLDVALVYGLLSFVGVVAIARYL------E-------GGI----------------
	'Thermococcus barophilus YP_004071064.1'              -------MIGINVYLAVIVVATLLSMYRFFRGPTTVDRLVAVDIMTTITTGLMVLFALYYRRAIFLDVALVYAVLAFLGVIAFARYL------E-------GGI----------------
	Thermococcus_sp._AHF80262.1                           -------MIGINIYLAVIAIATLLSMYRVFRGPTTVDRLVAVDIMTTITTGLMVLFALYYKRAIFLDVALVYAVLAFLGVIAFARYL------E-------GGI----------------
	'Pyrococcus yayanosii YP_004624105.1'                 -------MIGINVYLALIAIATLLSMYRVFRGPTIVDRLVAVDIMTTITTGLMVLFALYYKRMIFLDVALIYAVLAFGGVIAFARYL------E-------GGL----------------
	'Thermococcus onnurineus YP_002306880.1'              -------MIGINVYLALIAIATLLSMYRIFRGPTTVDRIVAVDIMTTITTGLMVLFALYYQRMIFLDVALVYAILAFGGVMAFARYM------E-------GGL----------------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  120;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  10;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  120;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  120;
END;

BEGIN TREES;
	Title 'Trees from "MbxB.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Thermoanaerobacter_ethanolicus_EGD52041.1,
[1] 		2 Thermoanaerobacter_siderophilus_EIW00248.1,
[2] 		3 'Caldanaerobacter subterraneus yonseiensis_ERM91250.1',
[3] 		4 'Thermoanaerobacter wiegelii YP_004818833.1',
[4] 		5 'Thermobrachium celere WP_018663245.1',
[5] 		6 'Caloramator australicus WP_008908952.1',
[6] 		7 'Thermococcus barophilus YP_004071064.1',
[7] 		8 Thermococcus_sp._AHF80262.1,
[8] 		9 'Pyrococcus yayanosii YP_004624105.1',
[9] 		10 'Thermococcus onnurineus YP_002306880.1';
	TREE tree_1 = (((3:0.000001,((4:0.208922,1:0.000001)0.0000:0.000001,2:0.000001)0.0000:0.000001)0.9430:0.151971,(6:0.212749,5:0.17049)0.8680:0.125799)1.0000:0.2043665,(7:0.017599,(8:0.011805,(10:0.081138,9:0.026019)0.9380:0.058672)0.4470:0.037999)1.0000:0.3874525)root;

END;


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