#NEXUS
[written Tue Aug 25 00:20:06 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=10;
	TAXLABELS
		'Caldanaerobacter subterraneus yonseiensis_ERM91259.1' Thermoanaerobacter_siderophilus_EIW00258.1 'Thermoanaerobacter wiegelii YP_004818843.1' Thermoanaerobacter_ethanolicus_EGD52031.1 Thermoanaerobacter_thermohydrosulfuricus_EMT39651.1 'Caloramator australicus WP_008908962.1' 'Thermobrachium celere WP_018663227.1' 'Aciduliprofundum boonei YP_003482748.1' Beggiatoa_sp._EDN67260.1 'Aciduliprofundum sp. YP_007246715.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=394;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus yonseiensis_ERM91259.1' MMDAPSYMLSKIAEKDNLTVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVADPDPNEVAYCTAIEKILRVDIPDRAKFLRTITLEMSRLSSFLMGMGALAASVGLYTAMNIMTADRDLILDLFEWLTGARVYHMFSIPGGVRNDLPDGFVERLYKVLDHLEKRLIEYDKLLFENPIIHKRLKGLGYVSKDDAVKYGLTGPNLRASGNPYDVRVDDPYAAYPYLDVRVITQE----------GGDALTRAVQIRLEFEETIKLIRQALKTMP--EGEIRLNLGNLSTLKVPKGEAYARVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMASLAICPPDIDK
	Thermoanaerobacter_siderophilus_EIW00258.1            MMDAPSYMLSKIAEKDNLTVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVADPDPNEVAYCTAIEKILRVDIPDRAKFLRTITLEMSRLSSFLMGMGALAASVGLYTAMNIMTADRDLILDLFEWLTGARVYHMFSIPGGVRNDLPDGFVERLYKVLDHLEKRLIEYDKLLFENPIIHKRLKGLGYVSKDDAVKYGLTGPNLRASGNPYDVRVDDPYAAYPYLDVRVITQE----------GGDALTRAVQIRLEFEETIKLIRQALKTMP--EGEIRLNLGNLSTLKVPKGEAYAKVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMASLAICPPDIDK
	'Thermoanaerobacter wiegelii YP_004818843.1'          MMDSPSYMLSKIAEKDNLTVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVADPDPNEVAYCTAIEKILRVDIPDRAKFLRTITLEMSRLSSFLMGMGALAAAVGLYTAMNIMTADRDLILDLFEWLTGARVYHMFSIPGGVRNDLPDGFVERLYKVLDHLEKRLIEYDKLLFENPIIHKRLKGLGYVSKEDAVKYGLTGPNLRASGNPYDVRVDDPYAAYPYLDVRVITQE----------GGDALTRAIQIRLEFEETINLIRRALKTMP--EGEIRLNLGNLSALKVPKGEAYAKVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMASLAICPPDIDK
	Thermoanaerobacter_ethanolicus_EGD52031.1             MMDSPSYMLSKIAEKDNLTVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVADPDPNEVAYCTAIEKILRVDIPDRAKFLRTITLEMSRLSSFLMGMGALAAAVGLYTAMNIMTADRDLILDLFEWLTGARVYHMFSIPGGVRNDLPDGFVERLYKVLDHLEKRLIEYDKLLFENPIIHKRLKGLGYVSKEDAVKYGLTGPNLRASGNPYDVRVDDPYAAYPYLDVRVITQE----------GGDALTRAIQIRLEFEETINLIRRALKTMP--EGEIRLNLGNLSALKVPKGEAYAKVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMASLAICPPDIDK
	Thermoanaerobacter_thermohydrosulfuricus_EMT39651.1   MMDSPSYMLSKIAEKDNLTVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVADPDPNEVAYCTAIEKILRVDIPDRAKFLRTITLEMSRLSSFLMGMGALAAAVGLYTAMNIMTADRDLILDLFEWLTGARVYHMFSIPGGVRNDLPDGFVERLYKVLDHLEKRLIEYDKLLFENPIIHKRLKGLGYVSKEDAVKYGLTGPNLRASGNPYDVRVDDPYAAYPYLDVRVITQE----------GGDALTRAIQIRLEFEETINLIRRALKTMP--EGEIRLNLGNLSALKVPKGEAYAKVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMASLAICPPDIDK
	'Caloramator australicus WP_008908962.1'              -MDAPSYMLTKIAEKDDLAVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGQLHRGFEKLMEQKLWVQNIALVPRICVVDPDPNEVAYCTAIEKIMGIEIPDRAKFIRTITLEMSRLTSFLMGMGALGAALGLYTPMYIMTADRDLILDLFEWLTGGRIYHIFNIPGGVRNDLPEGWVDRLNKVLDHLEKRLIEYDKILFENPIVHKRLKGLGYVSKEDAVRFGLTGPNLRASGNPYDVRVDDPYAAYAYLDVKVIIQE----------GGDALTRAVQVRIEFEETIKLIRQALKLMP--EGEVRLNLGNLAMLKVPKGEAYAKVESSKGEFGYYVVSDGGMKPYRVAVRGPSLPAGLLLAQKHLPKMKIDDVAAWMGSLAICPPDIDK
	'Thermobrachium celere WP_018663227.1'                -MDAPSYTLSKIAERDNLAVYELFFGPNHPGMHGNFGYVLEMIGTEIVKVRPNAGHLHRGFEKLMEQKLWVQNIALVPRICVVDPDPNEVAYCTAIEKIMGVDIPDRAKFIRTITLEMSRLTSFLMGMGALGAALGLYTPMYIMMADRDLILDLFEWLTGARIYHIFNIPGGVRNDLPEGWVERLNEVLDHLEKRLIEYDKLVFENPIIHKRLKGLGYISKEEAIRTGITGPNLRASGAAYDVRVDDPYAAYPYLDVKVITQD----------GGDALTRAVQVRLEFEETIKLIRQALKEMP--DGDVRLNLGNLSMLKVPKGEAYAKVESSKGEFGYYVVSDGGLKPYRVGVRGPSLPAGLLYAQKHLPKMKIDDVAAWMASLAICPPDIDK
	'Aciduliprofundum boonei YP_003482748.1'              -------------MKE----FELFIGPQHPGITGNFMYHLWVDGDTIVKAEAHPGYLHRGFEKLMEKRTWQMNVALIPRICVPEPDVNEAVYAMAVESLMDWDIPERAKYIRTIVLEMARLSSHLLTLGGYAGAIGLYTVGQWTIGDRDYLLDLFEQLTGARVYHIFIFPGGVRWDLPDGFLRKLEKVLNYLESRLEFYDKLLFANEVFFRRAPDVGVVPKDKAIEWGITGPNLRACGYEYDVRKVDPYAAYPDLDFEIPHYPKFGDFEVLGHGCDCYSRMIVRRLEIEQSIRILRQVIKKIP--DGPHTLKLPNPIAWKVPAGYAYARVESSKGEYGYFVISDGGKMPYRVHVRGPSYTHGINVTETIAKGLNIADFSQTIFSLDVCAPDIER
	Beggiatoa_sp._EDN67260.1                              MRPENYQPVEHPASHE----YELYFGPNHPGIEGNYALKVRLSGDEVVGVKADAGYLHRGFEKIMEERLWIQNVALVPRICVPDPPPMEETYARAVEMLGGLEVPERAQWIRVMMLEMSRIAAHLFIAGGTSATTGQYSNMFWGIADRDLILDLFEELTGARIYNMFITPGGVRRDIPDGFLDRLGQVLDFLEARLPEYDDLFFDNPVFHRRAEGIGKMTQEQALAWGVTGPNLRACGLPFDVRRNDPYLVYEQLDFDIPTET----------GGDVLDRIRVRRSEIIESTKILRQVIQRLPHVKGPIRCHLPNPLAWNVPEGDAYARTEAQKGELGFYAVSTGGTKPWRVHVRGPSCMHAVQVLEKLCLGARIEDIAMIMFSLDACPPEVDR
	'Aciduliprofundum sp. YP_007246715.1'                 -------------MKE----FELFVGPQHVGVTGNMMYHVWVDGDTVVKVETNVGYLHRGFEKLMERRSWLMNVALIPRICVPEPDVNEAVYAMAVESLMDWDIPERAKYIRTIVLEMARISGHLLAISGYAGAIGLYTLPNWAIGDRDYLLDLFEQLTGARVYHIFIFPGGVRWDLPDGFLRKLKKVLDYLEERLKLYDEVMFRNEIFFRRAIDVGVIPKDKAIEWGVTGPNLRACGYPYDVRKVDPYAAYPDLEFEIPHYPKFGEFEAYGHGCDAYSRMIVRRLEIEQSIRILRQIIKKIP--EGPHTLKLPNPLAWKVPAGYAFARVESSKGEFGYLVVSDGGKMPYRVHVRGPSYTHGINVIEKISPGLNIADFSPTAFSLDVCPPDIER

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  394;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  10;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  394;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  394;
END;

BEGIN TREES;
	Title 'Trees from "MbxL.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus yonseiensis_ERM91259.1',
[1] 		n1 Thermoanaerobacter_siderophilus_EIW00258.1,
[2] 		n2 'Thermoanaerobacter wiegelii YP_004818843.1',
[3] 		n3 Thermoanaerobacter_ethanolicus_EGD52031.1,
[4] 		n4 Thermoanaerobacter_thermohydrosulfuricus_EMT39651.1,
[5] 		n5 'Caloramator australicus WP_008908962.1',
[6] 		n6 'Thermobrachium celere WP_018663227.1',
[7] 		n7 'Aciduliprofundum boonei YP_003482748.1',
[8] 		n8 Beggiatoa_sp._EDN67260.1,
[9] 		n9 'Aciduliprofundum sp. YP_007246715.1';
	TREE tree_1 = (((((n3:0.000001,n2:0.000001)0.0000:0.000001,n4:0.000001)0.8940:0.009189,(n1:0.000001,n0:0.002783)0.8770:0.007625)0.8260:0.023206,(n6:0.052001,n5:0.038832)0.9280:0.039039)1.0000:0.407479,(n8:0.43911,(n9:0.081739,n7:0.086651)0.9990:0.339037)1.0000:0.059409)root;

END;


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		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
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			tell It;
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						namesAngle ?;
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				tell It;
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				tell It;
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				endTell;
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				tell It;
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				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
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			tell It;
				getWindow;
				tell It;
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				endTell;
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				getWindow;
				tell It;
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				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
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				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
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				getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip;
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				getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip;
				tell It;
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				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;