#NEXUS
[written Tue Aug 25 00:29:25 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=15;
	TAXLABELS
		'Caldanaerobacter subterraneus pacificus_EEB76411.1' 'Caldanaerobacter subterraneus tengcongensis_NP_621744.1' 'Caldanaerobacter subterraneus yonseiensis_ERM91216.1' Dehalobacter_restrictus_AHF10737.1 'Dehalobacter sp. WP_019226050.1' 'Dehalobacter sp. WP_020491764.1' 'Dehalobacter sp. YP_006910695.1' 'Thermoanaerobacter brockii YP_004187137.1' Thermoanaerobacter_ethanolicus_EGD52043.1 'Thermoanaerobacter pseudethanolicus YP_001666161.1' Thermoanaerobacter_siderophilus_EIW00246.1 'Thermoanaerobacter sp. X513 YP_003902998.1' 'Thermoanaerobacter sp. X514 YP_001661689.1' Thermoanaerobacter_thermohydrosulfuricus_EMT39687.1 'Thermoanaerobacter wiegelii YP_004818831.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=250;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus pacificus_EEB76411.1'     ------MPKESYSILLAGDSISRGVVLDREKNKYVITERNYVNLVKGRIKGTIKNISRFGATILKGIEMIKKEFVREKPDVVVLEFGGNDCDFDWEQVAKNPEMEHFPKTDYQLFIQKLKEIIEFLKEFDVVPVLMTLPPLDADRYLKWISKASKEMEENILRWLGSVTKIYWWQERYNSAIRIIAEETKTLVIDVRSAFLYYPDFRNFLCEDGIHPNEEGHKIMAHKIGEYLKKHYPFLLKI-------
	'Caldanaerobacter subterraneus tengcongensis_NP_621744.1' ------MPKESYSILLAGDSISRGVVLDREKNKYVITERNYVNLVKGRIKGTIKNISRFGATILKGIEMIKKEFVREKPDVVVLEFGGNDCDFDWEQVAKNPEMEHFPKTDYHLFIQKLKEIIEFLKEFEVVPVLMTLPPLDADRYLKWISKASKEVEENILRWLGSVTKIYWWQERYNSAIRVIAEETKTLVIDVRSAFLYYPDFRNFLCEDGIHPNEEGHKIMAHKIGEYLKKHYPFLLKI-------
	'Caldanaerobacter subterraneus yonseiensis_ERM91216.1'   --MASVTLQNYYDIVVAGDSISRGVVYSEEKNKYVISDVNYVNLLKNNIKGTVKNIAKFGNTLLKGIDTLKRYLSKDKPDIVVIEFGGNDCDFNWEEIAKNPHAEHRPKTDFYIFKEKLKELIKSLDDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICADGIHPNERGHKIIAHKVYEYLQRNYTHLLKE-------
	Dehalobacter_restrictus_AHF10737.1                       -------MKDNYTFLIVGDSISKGVIYNEDQGKYSLLDRNYVSLVQNSLKGMVYNAAKFGNTIKKGIERLNRDVSKTCPDIVLIEFGGNDCDFDWMQIASDPMAEHEPKTDFNVFGKMLTDTIISLKNNNIIPVLMTLPPLDADRYFKWISKNSNEIGKSILIWLGSVTKIYWWQERYNSMIVNIAEETRTRWIDVRGAFLKTPDFTQLLCIDGIHPNEDGHKVIAQKVTEYLRQNYNFLLKDSSADTLS
	'Dehalobacter sp. WP_019226050.1'                        MDNNQPELKENYTFLIVGDSISKGVIYNEDQGKYSLLDRNYVSLVQNSLKGMVYNAAKFGNTIKKGIERLHRDVSKTRPDIVLIEFGGNDCDFDWMQIASDPMAEHEPKTDFNVFGKMLTDTIISLKNNNIIPVLMTLPPLDADRYFKWISKNSNEIGKNILIWLGSVTKIYWWQERYNSMIVNIAEETRTRWIDVRGAFLKTPDFTQLLCIDGIHPNEDGHKVIAQKVTEYLRQNYNFLLKDSSADSLS
	'Dehalobacter sp. WP_020491764.1'                        MDNNQPELKDNYTFLIVGDSISKGVIYNEDQGKYSLLDKNYVSLVQNSLKGIVYNAAKFGNTIKKGIERLHRDVSKTRPDIVLIEFGGNDCDFNWMQIASDPMAEHEPKTDFNVFGKMLTDTIISLKNNNIIPVLMTLPPLDADRYFKWISKNSNEIGKNILIWLGSVTKIYWWQERYNSMIVNIAEETKTKWIDVRGAFLKTPDFTQLLCIDGIHPNEDGHKVIAQKVTEYLRQNYNFLLKDSSADSLS
	'Dehalobacter sp. YP_006910695.1'                        MDNNQSELKENYTFLIVGDSISKGVIYNEDQGKYSLLDRNYVSLVQNSLKGMVYNAAKFGNTIKKGIERLNRDVSKTRPDIVLIEFGGNDCDFDWMQIASDPMAEHEPKTDFNAFGKMLTDTIISLKNNNIIPVLMTLPPLDADRYFKWISKNSNEIGKNILIWLGSVTKIYWWQERYNSMIVNIAEETKTKWIDVRGAFLKTPDFTQLLCIDGIHPNEDGHKVIAQKVTEYLRQNYNFLLKDSSADSLS
	'Thermoanaerobacter brockii YP_004187137.1'              --MAGMTLENYYDIVVAGDSISKGVVYSKEKSKYVISDVNYVNLLKDNIKGTVKNIAKFGNTLLKGIDILKRYLLKDKPDIVLIEFGGNDCDFDWEEIAKNPYDEHSPKTDFYIFKEKLKELIKSLEDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICTDGIHPNEKGHKIIAHKIYEYLQRNYAYLLKE-------
	Thermoanaerobacter_ethanolicus_EGD52043.1                --MASVTLQNYYDIVIAGDSISRGVVYSEEKNKYVISDVNYVNLLKNNIKGTVKNIAKFGNTLLKGIDTLKRYLSKDKPDIVVIEFGGNDCDFDWEEIAKNPYDEHRPKTDFYIFKEKLKELIKSLDDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLNYPDFRQFICADGIHPNEKGHKIIAHKIYEYLQRNYTYLLKE-------
	'Thermoanaerobacter pseudethanolicus YP_001666161.1'     --MAGMTLENYYDIVVAGDSISKGVVYSKEKSKYVISDVNYVNLLKDNIKGTVKNIAKFGNTLLKGIDILKRYLLKDKPDIVLIEFGGNDCDFDWEEIAKNPYDEHSPKTDFYIFKEKLKELIKSLEDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICTDGIHPNEKGHKIIAHKIYEYLQRNYAYLLKE-------
	Thermoanaerobacter_siderophilus_EIW00246.1               --MASVTLQNYYDIVIAGDSISRGVVYSEEKNKYVISDVNYVNLLKNNIKGTVKNIAKFGNTLLKGIDTLKRYLSKDKPDIVVIEFGGNDCDFDWEEIAKNPYDEHRPKTDFYIFKEKLKELIKSLDDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICADGIHPNEKGHKIIAHKIYEYLQRNYTYLLKE-------
	'Thermoanaerobacter sp. X513 YP_003902998.1'             --MAGMTLENYYDIVVAGDSISKGVVYSKEKSKYVISDVNYVNLLKDNIKGTVKNIAKFGNTLLKGIDILKRYLLKDKPDIVLIEFGGNDCDFDWEEIAKNPYDEHSPKTDFYIFKEKLKELIKSLEDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICTDGIHPNEKGHKIIAHKIYEYLQRNYAYLLKE-------
	'Thermoanaerobacter sp. X514 YP_001661689.1'             --MAGMTLENYYDIVVAGDSISKGVVYSKEKSKYVISDVNYVNLLKDNIKGTVKNIAKFGNTLLKGIDILKRYLLKDKPDIVLIEFGGNDCDFDWEEIAKNPYDEHSPKTDFYIFKEKLKELIKSLEDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICTDGIHPNEKGHKIIAHKIYEYLQRNYAYLLKE-------
	Thermoanaerobacter_thermohydrosulfuricus_EMT39687.1      --MASVTLQNYYDIVIAGDSISRGVVYSEEKNKYVISDVNYVNLLKNNIKGTVKNIAKFGNTLLKGIDTLKRYLSKDKPDIVVIEFGGNDCDFDWEEIAKNPYDEHRPKTDFYIFKEKLKELIKSLDDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICADGIHPNEKGHKIIAHKIYEYLQRNYTYLLKE-------
	'Thermoanaerobacter wiegelii YP_004818831.1'             --MASVTLQNYYDIVIAGDSISRGVVYSEEKNKYVISDVNYVNLLKNNIKGTVKNIAKFGNTLLKGIDTLKRYLSKDKPDIVVIEFGGNDCDFDWEEIAKNPYDEHRPKTDFYIFKEKLKELIKSLDDANIIPVLMTLPPLDADRYFKWISKNSEEMGKNILKWLGSVTKIYWWQEKYNSAILSIAEETKTRLIDIRSAFLDYPDFRQFICADGIHPNEKGHKIIAHKIYEYLQRNYTYLLKE-------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  250;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  15;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  250;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  250;
END;

BEGIN TREES;
	Title 'Trees from "O163_11495.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus pacificus_EEB76411.1',
[1] 		n1 'Caldanaerobacter subterraneus tengcongensis_NP_621744.1',
[2] 		n2 'Caldanaerobacter subterraneus yonseiensis_ERM91216.1',
[3] 		n3 Dehalobacter_restrictus_AHF10737.1,
[4] 		n4 'Dehalobacter sp. WP_019226050.1',
[5] 		n5 'Dehalobacter sp. WP_020491764.1',
[6] 		n6 'Dehalobacter sp. YP_006910695.1',
[7] 		n7 'Thermoanaerobacter brockii YP_004187137.1',
[8] 		n8 Thermoanaerobacter_ethanolicus_EGD52043.1,
[9] 		n9 'Thermoanaerobacter pseudethanolicus YP_001666161.1',
[10] 		n10 Thermoanaerobacter_siderophilus_EIW00246.1,
[11] 		n11 'Thermoanaerobacter sp. X513 YP_003902998.1',
[12] 		n12 'Thermoanaerobacter sp. X514 YP_001661689.1',
[13] 		n13 Thermoanaerobacter_thermohydrosulfuricus_EMT39687.1,
[14] 		n14 'Thermoanaerobacter wiegelii YP_004818831.1';
	TREE tree_1 = (((n5:0.016263,n6:0.008132)0.6010:0.003668,(n3:0.020312,n4:0.000001)0.6910:0.004363)1.0000:0.400468,((((((n10:0.000001,n14:0.000001)0.0000:0.000001,n13:0.000001)0.0000:0.000001,n8:0.004079)0.0000:0.000001,(n7:0.000001,(n11:0.000001,(n12:0.000001,n9:0.000001)0.0000:0.000001)0.0000:0.000001)1.0000:0.056128)0.2500:0.006937,n2:0.022071)0.9040:0.119509,(n1:0.012025,n0:0.004787)1.0000:0.383125)1.0000:0.029993)root;

END;


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end;