#NEXUS
[written Wed Aug 26 01:01:21 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=14;
	TAXLABELS
		'Caldanaerobacter subterraneus tengcongensis_NP_621824.1' 'Caldanaerobacter subterraneus yonseiensis_ERM91335.1' 'Thermoanaerobacter ethanolicus WP_003868938.1' 'Thermoanaerobacter wiegelii YP_004818929.1' 'Thermoanaerobacter indiensis WP_019907184.1' 'Thermoanaerobacter thermohydrosulfuricus WP_004399990.1' 'Thermoanaerobacter siderophilus WP_006569904.1' 'Thermoanaerobacter mathranii YP_003677325.1' 'Thermoanaerobacter italicus YP_003477429.1' 'Thermoanaerobacterium xylanolyticum YP_004469842.1' 'Thermoanaerobacterium saccharolyticum YP_006391299.1' 'Thermoanaerobacterium thermosaccharolyticum YP_007297549.1' 'Thermoanaerobacterium thermosaccharolyticum YP_003850791.1' 'Coprothermobacter platensis WP_018962516.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=307;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus tengcongensis_NP_621824.1'   ---------MIKEILIF-VAAVILAPIIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDIVKLLYKQKILVNNFQVFSAYMYLLTAILSVGLFAIKADLLMILFVMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIALYNATGSFNIGQIMTHGR-LLLDLPLMFILLALVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYEMVLILMMIAILWSENL----LIGALIALLTFFLDIVLDNITARMTVKWML-AFSWTISILFTIVNIAYI-YF---RR----
	'Caldanaerobacter subterraneus yonseiensis_ERM91335.1'      ---------MIKEILIF-VAAIILAPIIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDIVKLLYKQKILVNNFQVFSAYMYLLTAILSVGLFAIKADLLMILFVMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIALYNATGSFNIGQIMIHGR-LLLDLPLMFILLALVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYEMVLILMMIAILWSENL----LIGALIALLTFFLDIVLDNITARMTVKWML-AFSWTISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter ethanolicus WP_003868938.1'             ---------MIKEIGIF-VVAVILAPLIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDVIKLLYKQRLLVNDFQVFSAYMYLLSAILSVGLFAIKADLLMILFIMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIAVYNVTGSFNLAQIMTHGK-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYEMILILAMIAILWSQNL----VIGALIALATFFVDIVIDNITARMTVKWML-AFSWSISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter wiegelii YP_004818929.1'                ---------MIKEIGIF-VVAVILAPLIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDVIKLLYKQRLLVNDFQVFSAYMYLLSAILSVGLFAIKADLLMILFIMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIAVYNVTGSFNLAQIMTHGK-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYELVLILAMIAILWSQNL----VIGALIALATFFVDIVIDNITARMTVKWML-AFSWSISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter indiensis WP_019907184.1'               ---------MIKEIRIF-VVAVILAPLIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDVIKLLYKQRLLVNDFQVFSAYMYLLSAILSVGLFAIKADLLMILFIMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIAVYNVTGSFNLAQIMTHGK-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYELVLILAMIAILWSQNL----VIGALIALATFFVDIVIDNITARMTVKWML-TFSWSISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter thermohydrosulfuricus WP_004399990.1'   ---------MIKEIGIF-VVAVILAPLIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDVIKLLYKQRLLVNDFQVFSAYMYLLSAILSVGLFAIKADLLMILFIMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIAVYNVTGSFNLAQIMTHGK-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYELVLILAMIAILWSQNL----VIGALIALATFFVDIVIDNITARMTVKWML-TFSWSISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter siderophilus WP_006569904.1'            ---------MIKEIGIF-VVAVILAPLIGGFLSGIDRKLTAFIQGRYGPPIWQPFYDVIKLLYKQRLLVNDFQVFSAYMYLLSAILSVGLFAIKADLLMILFIMSVGLVFYIAGALSTKSPYSQVGAQRELMQMLAYEPMLIFFAIAVYNVTGSFNLAQIMTHGK-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLALIHIADWYELVLILAMIAILWSQNL----VIGALIALAAFFVDIVIDNITARMTVKWML-AFSWSISILFTIVNIAYI-YF---RR----
	'Thermoanaerobacter mathranii YP_003677325.1'               --------MTLYKIIIF-VTAIIVAPLIGGFLSGIDRKLTAHIQGRYGPPIWQPFYDVIKLLHKQRLLVNDFQVFSAYMYLLSGILSVGLFALKTDLLMILFIMSVGVVFYIAGALSTKSPYSQVGAQRELMQMLGYEPMLIFFVIAVYNVTGSFNLAQIMIHGR-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLGLIQIADWYELVLILAMIAILWSQNL----VIGALIALATFFADIVLDNISARMTVKWML-VFSWSISILLTIVNVAYI-YF---RR----
	'Thermoanaerobacter italicus YP_003477429.1'                --------MTLYKIIIF-VTAIIVAPLIGGFLSGIDRKLTAHIQGRYGPPIWQPFYDVIKLLHKQRLLVNDFQVFSAYMYLLSGILSVGLFALKTDLLMILFIMSVGVVFYIAGALSTKSPYSQVGAQRELMQMLGYEPMLIFFVIAVYNVTGSFNLAQIMIYGR-LLLDLPLMFILLGLVLTIKLKKSPFDLSASEHAHQELVRGILTDYSGPYLGLIQIADWYELVLILAMIAILWSQNL----VIGALIALATFFADIVLDNISARMTVKWML-VFSWSISILLTIVNIAYI-YF---RR----
	'Thermoanaerobacterium xylanolyticum YP_004469842.1'        --------MTWVDYLVF-AAAVILTPLIGGFITGLDRKVTALIQGRYGPPVLQPFYDVVKLLSKEKMIVNDFQIFAAYIYLLSAILSVGFFAIKADLLMIIFIMSIGLVFYVIGALATRSPYSQVGAQRELMQMLAYEPLLIFVLIGMYYVAGSFNLHDIMSHGR-LLLDLPLIFVVLSLVLDIKIKKSPFDFSTSEHAHQELVRGILTDYAGPYLALIEIADWYELVLLLAMLAIFWSQNL----VIGALISLFVFFLDIIIDNISARMTLKWML-SFSWIVGISFTVLNIAYL-YF---SNVSR-
	'Thermoanaerobacterium saccharolyticum YP_006391299.1'      --------MTWTDYLIF-LAAVILTPLIGGLITGLDRKVTALIQGRYGPPVLQPFYDVVKLLSKEKMIVNDFQIFAAYIYLLSAILSVGFFAIKADLLMIIFIMSIGLVFYVIGALATRSPYSQVGAQRELMQMLAYEPLLIFVLIGMYYVAGSFNLHDIMSHGR-LLLDLPLIFVVLSLVLDIKIKKSPFDFSTSEHAHQELVRGILTDYAGPYLALIEIADWYELVLLLAMLAIFWSQNL----VIGALISLFVFFLDIIVDNISARMTLKWML-SFSWIVGISFTVLNIAYL-YF---SNVSR-
	'Thermoanaerobacterium thermosaccharolyticum YP_007297549.1' --------MTWMEYLVF-AIAIIVTPIIGGFITGLDRKVTALIQGRYGPPILQPFYDVTKLLSKEKMIVNDFQIFAAYIYLLSAILSIGFFAIKADLLMIVFIMSIGLVFYIVGALATRSPYSQVGAQRELMQMLAYEPLLIFVLIGMYYVSGSFSLKSIMSHGR-LLLDLPLIFLVLCLVLDIKIKKSPFDFSTSEHAHQELVRGILTDYSGPYLALIEIADWYELVLLLSMIAIFWSQNL----IIGALISLLILFLDIIVDNISARMTLKWML-SFSWIVGIVFTVVNIGYL-YF---SNLLR-
	'Thermoanaerobacterium thermosaccharolyticum YP_003850791.1' --------MTWMEYLVF-AIAVIVTPIIGGLITGLDRKVTALIQGRYGPPILQPFYDVTKLLSKEKMIVNDFQIFAAYIYLLSAILSIGFFAIKADLLMIIFIMSIGLVFYIVGALATRSPYSQVGAQRELMQMLAYEPLLIFVLIGMYYVSGSFSLKSIMSHGR-LLLDLPLIFLVLCLVLDIKIKKSPFDFSTSEHAHQELVRGILTDYSGPYLALIEIADWYELVLLLSMIAIFWSQNL----IIGALISLLILFLDIIVDNISARMTLKWML-SFSWIVGIVFTVVNIGYL-YF---SNVSR-
	'Coprothermobacter platensis WP_018962516.1'                --------MNVLNIVFRLLLALVVFPIIGGLIVGLDRKLTARLQGRYGPPILQPFYDVLKLFSKQRIIVNEFQVISVFIYLASSVLSLVLFTFQSDLLMIIFVMSIGAVFLVVGALSVKSAYSQVGAQRELMQMLSYEPLLILIIVGMYLMRGSFNIAVIMSQGRPLIEELPLLFLVMVIVLGIKMRKSPFDLSASEHAHQELVRGLLTDYSGLYLGLIDIAHWFDLMLLLGISTLFFYPHI----VLGIIASLFLVILEIVIDNVTARLTVKWML-TYSYGLGLVLAAINIAVV-YI---L---R-

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  307;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  14;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  307;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  307;
END;

BEGIN TREES;
	Title 'Trees from "echB.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus tengcongensis_NP_621824.1',
[1] 		n1 'Caldanaerobacter subterraneus yonseiensis_ERM91335.1',
[2] 		n2 'Thermoanaerobacter ethanolicus WP_003868938.1',
[3] 		n3 'Thermoanaerobacter wiegelii YP_004818929.1',
[4] 		n4 'Thermoanaerobacter indiensis WP_019907184.1',
[5] 		n5 'Thermoanaerobacter thermohydrosulfuricus WP_004399990.1',
[6] 		n6 'Thermoanaerobacter siderophilus WP_006569904.1',
[7] 		n7 'Thermoanaerobacter mathranii YP_003677325.1',
[8] 		n8 'Thermoanaerobacter italicus YP_003477429.1',
[9] 		n9 'Thermoanaerobacterium xylanolyticum YP_004469842.1',
[10] 		n10 'Thermoanaerobacterium saccharolyticum YP_006391299.1',
[11] 		n11 'Thermoanaerobacterium thermosaccharolyticum YP_007297549.1',
[12] 		n12 'Thermoanaerobacterium thermosaccharolyticum YP_003850791.1',
[13] 		n13 'Coprothermobacter platensis WP_018962516.1';
	TREE tree_1 = (n13:0.360671,(((n12:0.003884,n11:0.00737)0.9780:0.056311,(n10:0.015292,n9:0.000001)0.9240:0.045476)0.9790:0.107308,((n2:0.00405,(((n8:0.000001,n7:0.003744)1.0000:0.074348,(n5:0.000001,n4:0.000001)0.7220:0.003744)0.0000:0.000001,(n6:0.003743,n3:0.000001)0.0000:0.000001)0.7420:0.003415)0.4720:0.028006,(n1:0.003728,n0:0.000001)0.9870:0.055874)0.9910:0.136507)0.9980:0.214799)root;

END;


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				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;