#NEXUS
[written Wed Aug 26 01:04:37 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=9;
	TAXLABELS
		'Caldanaerobacter subterraneus tengcongensis_NP_621825.1' 'Caldanaerobacter subterraneus yonseiensis_ERM91336.1' 'Thermoanaerobacter ethanolicus WP_003868939.1' 'Thermoanaerobacter wiegelii YP_004818930.1' 'Thermoanaerobacter italicus YP_003477428.1' 'Thermoanaerobacter mathranii YP_003677324.1' 'Thermoanaerobacterium xylanolyticum YP_004469843.1' 'Thermoanaerobacterium thermosaccharolyticum YP_003850792.1' 'Thermoanaerobacterium saccharolyticum YP_006391300.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=363;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus tengcongensis_NP_621825.1'   ----------------MGLKEFIEKSFKKSPWVLHYNASSCNGCDIEILACMTPIYDMERFGMMNVGNPKHADILVVTGSVNTRNKDVLKNIYDQMPEPKVVVAVGVCAATGGVFRDTYNVLGGVDKVIPVDVYVPGCPAKPEAIIDGLYKATEILKEKYKK--MGKAEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Caldanaerobacter subterraneus yonseiensis_ERM91336.1'      ----------------MGLKEFIEKSFKKSPWVLHYNASSCNGCDIEILACMTPIYDMERFGMVNVGNPKHADILVVTGSVNTRNKDVLKNIYDQMPEPKVVVAVGVCAATGGVFRDTYNVLGGVDKVIPVDVYVPGCPAKPEAIIDGLYKATEILKEKYKK--MGKAEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter ethanolicus WP_003868939.1'             ----------------MGLKEFVEKSFKKSPWVLHYNCSSCNGCDIEILACMTPLYDMERFGMVNVGNPKHADILVVTGTVNTRNKEVLKNIYDQMPDPKVVVAVGVCAATGGVFREAYNVIGGIDKVIPVDVYVPGCPAKPEAIIDGLYKAAEILKEKYEK--MGKAEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter wiegelii YP_004818930.1'                ----------------MGLKEFVEKSFKKSPWVLHYNCSSCNGCDIEILACMTPLYDMERFGMVNVGNPKHADILVVTGTVNHKNKEVLKNIYDQMPEPKVVVAVGVCAATGGIFREAYNVLGGIDKVIPVDVYVPGCPAKPEAIIDGLYKAAEILKEKYEK--MGKAEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter italicus YP_003477428.1'                ----------------MGLKEFIEKSFKKSPWVIHYDCGSCNGCDIELLSCMTPLYDMERFGMVNVGNPKHADILVVTGTVNHKNKVVLKNIYDQMPEPKVVVAVGVCAATGGIFRECYNVVGGVDKIIPVDVYVPGCPAKPEAIIDGLYKATEILKEKYDK--MAKAEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter mathranii YP_003677324.1'               ----------------MGLKEFIEKSFKKSPWVIHYDCGSCNGCDIELLSCMTPLYDMERFGMVNVGNPKHADILVVTGTVNHKNKVVLKNIYDQMPEPKVVVAVGVCAATGGIFRECYNVVGGVDKIIPVDVYVPGCPAKPEAIIDGLYKATEILKEKYDK--MAKTEEVLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium xylanolyticum YP_004469843.1'        ----------------MGLKEFVKKSFSKSPWVVHYDCGSCNGCDIEVLACMTPIYDMERFGMVNVGNPKHADILIVTGTVNEKNKDVLKNVYDMMPDPKVVVAAGICACSGGIFRDCYNVLGGIDKVIPVDVYVPGCPAKPEAMIDGLYKAAQILKEKYSRKEVIVSAKSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium thermosaccharolyticum YP_003850792.1' ----------------MGLKEFVKKSFSKSPWVVHYDCGSCNGCDIEVLACMTPIYDMERFGMVNVGNPKHADILIVTGTVNEKNKDVLKNVYDMMPEPKVVVAAGICACSGGIFRDCYNVLGGIDKVIPVDVYIPGCPAKPEAMIDGLYKAAQILKDKYSRREVIVSAKSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium saccharolyticum YP_006391300.1'      ----------------MGLKEFVKKSFSKSPWVVHYDCGSCNGCDIEVLACMTPIYDMERFGMVNVGNPKHADILIVTGTVNEKNKDVLKNVYDMMPDPKVVVAAGICACSGGIFRDCYNVLGGIDKVIPVDVYVPGCPAKPEAMIDGLYKAAQILKDKYSRREVIVSAKSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  363;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  9;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  363;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  363;
END;

BEGIN TREES;
	Title 'Trees from "echC.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus tengcongensis_NP_621825.1',
[1] 		n1 'Caldanaerobacter subterraneus yonseiensis_ERM91336.1',
[2] 		n2 'Thermoanaerobacter ethanolicus WP_003868939.1',
[3] 		n3 'Thermoanaerobacter wiegelii YP_004818930.1',
[4] 		n4 'Thermoanaerobacter italicus YP_003477428.1',
[5] 		n5 'Thermoanaerobacter mathranii YP_003677324.1',
[6] 		n6 'Thermoanaerobacterium xylanolyticum YP_004469843.1',
[7] 		n7 'Thermoanaerobacterium thermosaccharolyticum YP_003850792.1',
[8] 		n8 'Thermoanaerobacterium saccharolyticum YP_006391300.1';
	TREE tree_1 = (((n8:0.000001,n7:0.018965)0.8030:0.009451,n6:0.000001)0.9740:0.129005,((n5:0.000001,n4:0.000001)0.9650:0.069065,(((n1:0.000001,n0:0.009202)0.9910:0.079888,n2:0.016949)0.8940:0.031076,n3:0.000001)0.9240:0.045616)0.8180:0.036266)root;

END;


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