#NEXUS
[written Wed Aug 26 01:07:56 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=11;
	TAXLABELS
		'Caldanaerobacter subterraneus yonseiensis_ERM91337.1' 'Caldanaerobacter subterraneus tengcongensis_NP_621826.1' 'Thermoanaerobacter ethanolicus WP_003868940.1' 'Thermoanaerobacter WP_004399988.1' 'Thermoanaerobacter indiensis WP_019907185.1' 'Thermoanaerobacter wiegelii YP_004818931.1' 'Thermoanaerobacter italicus YP_003477427.1' 'Thermoanaerobacterium thermosaccharolyticum YP_003850793.1' 'Thermoanaerobacterium xylanolyticum YP_004469844.1' 'Thermoanaerobacterium saccharolyticum YP_006391301.1' 'Coprothermobacter platensis WP_018962514.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=649;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus yonseiensis_ERM91337.1'      ----------------------------------------------MIKTREVK-LEEVEKEAKYYYDNGYRFVTETCLEED-GKFRIIYTFEK-D--SE--------------------LESFHTY-V-SPEEEVPSISKVYFAAIPVENEIHEMFGLRFKNLALDFQGLLFLGEFAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Caldanaerobacter subterraneus tengcongensis_NP_621826.1'   ----------------------------------------------MIKTREVK-LEEVEKEAKYYYDNGYRFVTETCLEED-GKFRIIYTFEK-D--SE--------------------LESFHTY-V-SPEEEVPSISKVYFAAIPVENEIHEMFGLRFKNLALDFQGLLFLGEFAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter ethanolicus WP_003868940.1'             ----------------------------------------------MITTKEIK-LEDIEKETKYYYENGYRFVTETCLEEE-GKFKIIYTFEK-D--YQ--------------------MDSFHVF-V-SPQEEVPSISKIYFAALPVENEIHEMFGMKFKNLVLDFQGLLFLGEYAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter WP_004399988.1'                         ----------------------------------------------MINSREVK-VDEIEKEAKYYYDNGYRFVTETCLEED-GKFKIIYTFER-E--YE--------------------LENFHVY-V-NPAEEVPSISKIYFAALLVENEIQELFGVKFKNLAIDFEGLLFLGEYAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter indiensis WP_019907185.1'               ----------------------------------------------MINSREVK-VDEIEKEAKYYYDNGYRFVTETCLEED-GKFKIIYTFER-E--YE--------------------LENFHVY-V-NPAEEVPSISKIYFAALLIENEIQELFGVKFKNLAIDFEGLLFLGEYAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter wiegelii YP_004818931.1'                ----------------------------------------------MINSREVK-VDEIEKEAKYYYDNGYRFVTETCLEED-GKFKIIYTFER-D---E--------------------LENFHVY-V-NPAEEVPSISKIYFAALLVENEIQELFGVKFKNLAIDFEGLLFLGEYAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIMRRDK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacter italicus YP_003477427.1'                ----------------------------------------------MINSREVK-IDEIEKEAKYYYDNGYRFVTETCLEED-GKFKIIYTFAK-E--YE--------------------LENFHVY-V-NTSEEVPSISKIYFAALLVENEIQEMFGLKFKNLVIDFEGLLLLGEYSP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-SIEIIKKNK------GDKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium thermosaccharolyticum YP_003850793.1' ---------------------------------------------MIVNSREVT-VDNLKKEVKKYHDDGYRFVTETCLNFE-GQFKIIYTFAK-G--YD--------------------LDNIHIV---TDGKNVPSVSDVYSCALLVENEIKELFGVEFDGLVVDFGGKLMLGESSP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-DIEIIRREK------GGKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium xylanolyticum YP_004469844.1'        ---------------------------------------------MIVNSREVE-IGNLKSEVKKYHDGGYRFVTETCLNLE-DKFKIIYTFAI-G--YD--------------------LENIHII---TDGKNVPSVSDIYSCALAVENEIKELFGVEFDGLAVDFGGNFMLGESSP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-DIEIIRREK------GGKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Thermoanaerobacterium saccharolyticum YP_006391301.1'      ---------------------------------------------MIVNSREVE-IGNLKNEVKKYHDGGYRFVTETCLNLE-DKFKIIYTFAI-G--YD--------------------LENIHII---TDGKNVPSVSDIYSCALAVENEIKELFGVEFDGLAVDFGGNFMLGESSP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IS-PQA-DIEIIRREK------GGKNE--------------------------------------------------------------------------------------------------------------------------------------
	'Coprothermobacter platensis WP_018962514.1'                ----------------------------------------------MIEAKEIT-LDNLLSEVKNYHDNGYRLVTTTCMEVDDDKLEILYHFDK-D--FK--------------------LENLRLT-V-DKNQTIPSISSIYFCAVLSENEMQDMFGLKIDGMVVDYGGKFLLGEDSP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-PMA-HIQIVAKEQ------GENKEGGNNA---------------------------------------------------------------------------------------------------------------------------------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  649;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  11;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  649;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  649;
END;

BEGIN TREES;
	Title 'Trees from "echD.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus yonseiensis_ERM91337.1',
[1] 		n1 'Caldanaerobacter subterraneus tengcongensis_NP_621826.1',
[2] 		n2 'Thermoanaerobacter ethanolicus WP_003868940.1',
[3] 		n3 'Thermoanaerobacter WP_004399988.1',
[4] 		n4 'Thermoanaerobacter indiensis WP_019907185.1',
[5] 		n5 'Thermoanaerobacter wiegelii YP_004818931.1',
[6] 		n6 'Thermoanaerobacter italicus YP_003477427.1',
[7] 		n7 'Thermoanaerobacterium thermosaccharolyticum YP_003850793.1',
[8] 		n8 'Thermoanaerobacterium xylanolyticum YP_004469844.1',
[9] 		n9 'Thermoanaerobacterium saccharolyticum YP_006391301.1',
[10] 		n10 'Coprothermobacter platensis WP_018962514.1';
	TREE tree_1 = (n10:0.276726,(((n9:0.000001,n8:0.008265)0.9760:0.11313,n7:0.032449)0.9710:0.229751,(((n2:0.115473,(n1:0.000001,n0:0.000001)0.9650:0.075548)0.9880:0.105096,(n5:0.008203,(n4:0.008189,n3:0.000001)0.0000:0.000001)0.7690:0.035883)0.9420:0.049799,n6:0.000001)0.9900:0.259247)0.9750:0.213253)root;

END;


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