NEXUS [File created by TreeBASE: 7/26/07 21:00:20] [Matrix accession#: M1153] BEGIN TAXA; TITLE M1153; DIMENSIONS NTAX=18; TAXLABELS Stylidium_calcaratum Stylidium_bulbiferum Stylidium_graminifolium Stylidium_emarginatum Phyllachne_uliginosa Phyllachne_rubra Phyllachne_colensoi Phyllachne_clavigera Oreostylidium_subulatum_97.292 Oreostylidium_subulatum_7273 Levenhookia_leptantha Forstera_tenella Forstera_bidwillii Forstera_sedifolia Forstera_mackayi Forstera_bellidifolia Donatia_fascicularis 'Donatia novae-zelandiae' ; END; BEGIN CHARACTERS; TITLE M1153; DIMENSIONS NCHAR=782; FORMAT MISSING = ? GAP = - DATATYPE = DNA ; MATRIX Stylidium_calcaratum TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAACCCTGCAAACGCAGAGCGACCAGAGAACACGTATA----------AAACTTCACGTCGGGGGACT----------------------------------TCC----CCC--------GGCGGCCGGC-ATGCCCGGCACAAACAACGAACCCCGGCGCGAACCGCGCCAAGGAATACATAAA-CTCGTG----CGGCTGCCGCCGC--------------ATACGAGAAC------------TATAT---AAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCTGAGGGCACGTCTGCCTGGGCATCACGCATCGCGTCGCCCCCCACAACTCCCTCCAC----------GGGGGGCTGCTTGTGTTGGGGCGGATAATGGCCTCCCGTGACGTG-TCGC--GGATGGCC-GAAAACAGAGTCCTTC--GTCGGCGATACGCTCGGCAAATGGTGGTTTGATAAA------AATTCTCCTGCTGAGCGTCTCCT-TACTTACGAGACTCTCTGACCCCTT------GAGGCGCGCCCCT-------------------------------------TCGGGTGTGTG-CGCCAC------GACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Stylidium_bulbiferum TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCA-GCAGAACGACCGGAGAACACGTAAAA-AGAATC--GGCCGGCGCGTGATGCGTCGCGGCCAG-CCCGTGAC-----------------GCCGAA-CCCC--------GGCCGCCGGC-ATGCCCGGCACAAACAACGAACCCCGGCGCGATCCGCGCCAAGGAAAACATACAGCTCGAG----CGGCTGCCGCCGC--------------GCGCGAGAA-------------TGAAT-CACAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACTCATCGCGTCGCCCCCCGCAACCTCTCA-------------CGAGGGCTGCG------GGGGCGGACAGTGGCCTCCCGTGACCTGCTCGC--GGCTGGCCTAAAAG?GAAGTCCCCC--GTCGGCGA-ACGCACGGCAAAGTGGTGGTTGACAAA---CTCGTTGCTCCTGCTGTGCGACC----CGCGGGCACGACCGCACGACCCCG-------ACGGCATCACCTC----------------------------------TAAACCAGGAGGCGAAGCCAC------GACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Stylidium_graminifolium TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAA?CCTGCCCA-GCAGAACGACCCGAGAACAAGTTAA---CAAAC--GGCCGGCGGGT?GTGCGCCCAGGCCAG-CCCGAGGC-----------------GCCGAT-CCCT--------GGCCGCCGGC-ATGCCCGGCACAAACAACGAACCCCGGCGCGATCCGCGCCAAGGAAAACTCAAAGCTCGAG----CGGCTGCCGCCGC--------------ATGCGAGAAG------------TAAAA-CACAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACTCATCGCGTCGCCCCCCGCAACCTCTCC-------------GGAGGACTGCGC-----GGGGCGGACAGTGGCCTCCCGTGACCCGATCGC--GGCTGGCCCAAAAGAGAAGTCCCCC--GTCGGCAA-ACGCACGGCAAAGTGGTGGTCGATAA----CTCGTTGCTCCTGCCGTGCGTCCT---CGCGGGCGCGACCGAACGACCCCG-------ACGGCCCACCCTC----------------------------------CCCTCCCGGAGGCGACGCCACA----CGACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Stylidium_emarginatum TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCA-GCAGAACGACCGGAGAACACGTACA------GA--AACTGGACGGTCGGGGGTCT------------CGAT-----------------CCCG----CCC--------GTCCGCCGGC-CAGCCCGGCACAAACAACGAACCCCGGCGCGAACCGCGCCAAGGAAAACTCAATGCTCGAG----CGGCTGCCGCCGC--------------GTA-GAGAA-------------TAAAT-CTAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCAAAATGCGACACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACTCATCGCGTCGCCCCCGCAAACCCCCTTCACTTCACTCAGTGGAGGGAAGCGGA-GCGAGGGCGGAAACTGGCCTCCCGTGACGCGATCGC--GGCCGGCCTAAATACGGAGTCCCCC--GTCGGCGC-ACGCACGGCAAAGTGGTGGTTGGAAAATAACTCGTTGCTCCTGCCGTGCGGCAC---AGGGCGCGACCCCAAGCGACCCCGTACTGTCGCGGCTCCGCCCCGTCCTCGCGTGCCAGGACCCCGGTGCCCGGCAAGCGAGCGGAGGGGCAGAGACGCAGTCACGACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Phyllachne_uliginosa TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAATGACCAGCGAACCTGTAAAA-ATATAA--GTCGAGGAGATGGAGATACACAGCCTG-TCTTTGGGGT--AG------ATGTCGCCTGATCCTT--------GGCCGTCGGC-TTGTCCGGCCCAAATAACGAACCCCGACGCAATCTGCGTCAAGGAAAACTCATA-CTTGAG----CGGCTTTTGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAA?GACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTGAGGGCACGTCTGCCTGGGCATCACACATTGTGTT-ACCACTCC----AATACCTCT---------CACGGGCTTTGGGGATGGTG-CGGACATTGGCCTCCCGTGCCATGAGTGC--GGTTGGCCAAAAGATAGTGTCACCCTCGTCTGCGG-GTGCACGACAT-TTGGTGGTTTACAA----TTTGTTTCTGCTGTCGTGCGTCCTCA-ACGGG-CAAGGACCGTTTCACCCAT-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Phyllachne_rubra TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAAA-GTCGAGGTGAAGGAGAGACAGAGCCCG-CCTTCGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGTACCCCGACGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGGCTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-AAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCCCAATACCACCTAT---------CACGGTGTTTGTGGGAGG---CGGATATTGGTCTCCCGTGCCATGATTGC--GGTTGGCCCAAAGATAGTGTCACCCACGTCTGCGG-ACGCACGACAT-TTGGTGGTTTACAAA---TTTGTTTCTGCTGTCGTGCTT?CTCA-ATGTG-GTAAGACCGTTTGACCCAC-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Phyllachne_colensoi TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCGAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACAGAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGTACCCCGGCGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGGCTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCTGCC-AATACCACCTAT---------CACGGTGTTTGTGGGCGG---CGGATATTGGTCTCCCGTGCCATGATTGCGCGGATGGCCCAAAGATAGTGTCACCCACGTTTGCGG-ACGCACGACAT-TTGGTGGTTTACAAA---TTTGTTTCTGCTGTCGTGCTTCCTCA-ATGGG-CTAAGAC?GTTTGACCCAC-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Phyllachne_clavigera TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCGAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACAGAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGTACCCCGGCGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGGCTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCC-AATACCACCTAT---------CACGGTGTTTGTGGGCGG---CGGATATTGGTCTCCCGTGCCATGATTGCGCGGTTGGCCCAAAGATAGTGTCACCCACGTTTGCGG-ACGCACGACAT-TTGGTGGTTTACAAA---TTTGTTTCTGCTGTCGTGCTTCCTCA-ATGGG-CTAAGACCGTTTGACCCAC-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Oreostylidium_subulatum_97.292 TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCA-GCAGAACGACCCGAGAACAAGTTAAA--CAAAC--GGCCGGCGGGTCGTGCGCCC-----------GAGGC-----------------GTCGAT-CCCC--------GGCCGCCGGC-ACGCCCGGCACAAACAACGAACCCCGGCGCGATCCGCGCCAAGGAAAACTTAAAGCTCGAG----CGGCTGCCGCCGC--------------ATGCGAGAAG------------TAAAAACACAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACTCATCGCGTCGCCCCCCGCAACCTCTCC-------------GGAGGGCTGCGC-----GGGGCGGACAGTGGCCTCCCGTGACCCGCTCGC--GGCTGGCCCAAAAGCAAAGTCCCCC--GTCGGCAA-ATGCACGGCAAAGTGGTGGTCGATAA----CTCGTTGCTCCTGCCGTGCGTCCT---CACGGGCGCGACCGAACGACCCCG-------ACGGCCCACCCTC----------------------------------CCATCCGGGAGGCGACGCCACA----CGACCGCGATCCCAGGTCAGGCGGGAA???????????????? Oreostylidium_subulatum_7273 TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCA-GCAGAACGACCCGAGAACAAGTTAAA--CAAAC--GGCCGGCGGGTCGTGCGCCC-----------GAGGC-----------------GTCGAT-CCCC--------GGCCGCCGGC-ACGCCCGGCACAAACAACGAACCCCGGCGCGATCCGCGCCAAGGAAAACTTAAAGCTCGAG----CGGCTGCCGCCGC--------------ATGCGAGAAG------------TAAAAACACAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACTCATCGCGTCGCCCCCCGCAACCTCTCC-------------GGAGGGCTGCGC-----GGGGCGGACAGTGGCCTCCCGTGACCCGCTCGC--GGCTGGCCCAAAAGCAAAGTCCCCC--GTCGGCAA-ATGCACGGCAAAGTGGTGGTCGATAA----CTCGTTGCTCCTGCCGTGCGTCCT---CACGGGCGCGACCGAACGACCCCG-------ACGGCCCACCCTC----------------------------------CCATCCGGGAGGCGACGCCACA----CGACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Levenhookia_leptantha TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCACA-GCAGAACGACCAGCGAAC-TGTATGT-AAACCA--GGCCGGGGAGAAGGCGAGCG-GGTAAC-GCCGCAAC-----------------CCGGGA-CCCT--------GGCCGCCGGC-TCGTCCGGCACAAACAACGAACCCCGGCGCAATCCGCGCCAAGGAAAACG-AATGCTCGAG----CGGCTGCCGCCGC--------------CCACGAGAA-------------CATAATCACAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTTTGCCTGGGCATCACACATCGCGTCGCTCCCCCAAGCCCCCAA-------------AACGGGCTGCAG-----GGGGCGGAAATTGGCCTCCCGTGAT-CGATCGC--GGATGGCCCAAATA-AGAGTCCCCC--GTCTGCGG-ACGCACGGCAA-GTGGTGGTTGATAAA---CTCGTTGCTCATGCCGCGCGTCCT---CACGGTTAGGACCCCACAGCCCGA-------ACGGCTGCCTCCC-----------------------------------GAGCGGAGCCGTA-GCCCAC------GACCGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Forstera_tenella TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACACAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGAACCCCGACGCAATCTGCGTCAAGGAAAACTCATG-CTCGTG----CGACTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCCCAATACCGCATGT---------CACGGTGTTTGTGGGCGG---CGGATATTGGTCTCCCGTGCCATGATTGC--GGTTGGCCCAAAGACAGTGTCAGCCACGTCTGCGG-ACGCACGACAT-TTGGTGGTTTACAA----TCTGTTTCTGCTGTCGTGCCTCCTCA-ACGGGGCCAAGACCGTTTGACCCAC-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Forstera_bidwillii TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACACAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGAACCCCGACGCAATCTGCGTCAAGGAAAACTCATG-CTCGTG----CGACTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCCCAATACCGCATGT---------CACGGTGTTTGTGGGCGG---CGGATATTGGTCTCCCGTGCCATGATTGC--GGTTGGCCCAAAGACAGTGTCAGCCACGTCTGCGG-ACGCACGACAT-TTGGTGGTTTACAA----TCTGTTTCTGCTGTCGTGCCTCCTCA-ACGGGGCCAAGACCGTTTGACCCAC-----CATTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGCTGAATTTAA Forstera_sedifolia TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAAAAGTCGAGGTGAAGGAGAGACACAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-CTGTCCGGCCCAAACAACGAACCCCGACGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGACTGTCGTCGC--------------TTTCGAGAA-------------AAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCC-AATACCACCTGT---------CGCGGTGTTTGTGGGCGGGGGCGGATATTGGTCTCCCGTGCCATGATCGC--GGTTGGCCCAAAGATAGTGTCACCCACGTCTGCGG-ACGCACGACAT-TTGGTGGCTTACAA----TCTGTTTCTGCTGTCGTGCTTCCTCA-ACGGGGCTAAGACCGTTTGACCCAC-----CACTGGCTGTCTCC-------------------------------------TTCGGGAAGTGATGCCAC------GAACGCGATCCCAGGTCAGGCGGGAACACCCGC????????? Forstera_mackayi TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCAA-GCAGAACTACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACACATCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGAACCCCGACGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGGCTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCATCACACATTGCGTCGACCCCCCC-AATACCACCTGT---------CACGGTGTTTGTGGGCGG---CGGATATTGGTCTCCCGTGCCATGATTGC--GGTTGGCCCAAAGATAGTGTCACCCACGTCTGCGG-ACGCACGACAT-TTGGTGG?TTACAAA---TTTGTTTCTGCTGTCGTGCTTCCTCA-ACGGG?TAAA?ACCGTTTGACCCAC-----CACGGG-TGTCTCC-------------------------------------T-CGGGAAATGATGCCAC------AA--GCGATCCC?????????????????????????????? Forstera_bellidifolia TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCGAA-GCAGAACGACCAGCGAACCCGTACAA-ATAAAA--GTCGAGGTGAAGGAGAGACAGAGCCCG-CCTTTGGTGGCAAG------ATGTCGCCAGATCCTT--------GGCCGCCGGC-TTGTCCGGCCCAAACAACGTACCCCGGCGCAATCTGCGTCAAGGAAAACTCATA-CTCATG----CGGCTGTCGTCGC--------------TTTCGAGAA-------------TAAAT-CAAAAACGACTCTCGGCAACGGATATCTAGGCTCTCGCAACGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATTCGGCCGAGGGCACGTCTGCCTGGGCGTCACACATCGCGTCGCCCCCACC-ATGGCATCCTTT---------TGGGATGCTTGGCTAGGGG--CGGATACTGGCCT?CCGTTCCT?ACCCGAGCGGTTGGCCAAAATA-AGAGTCCCCT---TC?ACGG-ACGCACGACTA-GTGGTGGTTGACAAA---CCCA?AATC?C-GTCGTGTGTCTTGT-TGCGA--GGG?GTATCTTAACAGAC-----CCCAACGTGTCGTC-------------------------------------T---TGTAACGACGCTTC------?ACCGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA Donatia_fascicularis TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAATCCTGCACA-GCAGAGTGACCAGTGAACATGTCTAACACACTAGGGTTGCGGGGATCGGGTGCATGCCCCTGATCCGTGACCCCCCG-TCGGTGTACATCCCTGCCCCTTCCGGGGGAGCAGTGGGTGTTGCCCGACACAAA-AACGAACCCCGGCACGATCTGTGCCAAGGAAACTCCAAA-CTTAAGAGCACGCCTCCCGTTGCCCCGTCCGCGGTGTGCGCGGGAGGCCGTCGCTT?TGAGAAAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGACACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCAAAACCTGCGCCCTGA-------AAATGGGCATTCAGATACGGGGGCGGATACTGGCCTCCCGTGCCCCTGGTGC--GGTTGGCCCAAAAACAGAGTCATCG---TTGATAA-ATGCACGACAA-GTGGTGGTTGATTGTT--CTCAGTGCTCCTGTTGTGCATTTGTTCTTTAGGCGGCGACATCTCACTTGAC-----CCTGACGCGTCGTC-----------------------------------------CCTGACGATGCTAC------GACCGCGACCCCAGGTCAGGCGGGAC?ACCCGCTGAGTTTAA 'Donatia novae-zelandiae' TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCACA-GCAGACCGACCCGTGAACATGTATAACACACTAGGGTTACGGGGATCGGGTGCAAGCCCCTGATCCGTGACCCCCCGGCCAGAGCACGTCCTTGCCCCTTCCGGGGGAGCAGTGGGCGTTGCCCGGCACAAA-AACAAACCCCGGCGCGATCTGCGCCAAGGAAACTCCAA--CTTAAGAGCACGTCTCCCGTTGCCCCGTTCGCGGTGCGCGCGGGAGGCCGTCGCTTATGAGAAAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGACACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGCCGAGGGCACGTCTGCCTGGGCGTCAC?CATCGCGTCGCCCCCAAAACATGCGCCCTGA-------AAATGGGCGTTAAGATGCGGGGGCGGATACTGGCCTCCCGTGCCCCTGGCGC--GGTTGGCCCAAAA-CAGAGTCATCG---CCGATAA-ATGCACGACAA-GTGGTGGTTGAATGTT--CTCCGTGCTCCTGCCGTGTGTTTGTTCTTTAGGCGGCGGCATCTCACTTGAC-----CCTGACGCGTCGTC-----------------------------------------CCCGACGATGCTAC------GACCGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA ; END; BEGIN CODONS; GENCODE UNIVNUC ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;