NEXUS
[File created by TreeBASE:  7/26/07  21:15:34]
[Matrix accession#: M2979]

BEGIN TAXA;
	TITLE M2979;
	DIMENSIONS  NTAX=19;
	TAXLABELS
		Micromeria_varia_FU14_FU13_FU15_FU16_etc	Micromeria_benthamii_tenuis_GC40B	Micromeria_varia_91	Micromeria_tenuis_107	Micromeria_leucantha_GC30A	Micromeria_pineolens_GC36B_GC38_GC11A	Micromeria_tenuis_GC42	Micromeria_lanata_GC6a	Micromeria_tenuis_110	Micromeria_tenuis_GC26A_GC44	Micromeria_lasiophylla_Ten46_Ten47_Ten49	Micromeria_lachnophylla_Ten_52_Ten53_etc	Micromeria_varia_lepida_GOFT7	Micromeria_herpyllomorpha_LP22_LP19	Micromeria_teneriffae_Ten67_Ten66_etc	Micromeria_cf_varia_Ten23	Micromeria_hyssopifolia_HI17_HII8_etc	Micromeria_inodora	Satureja_montana
	;
END;

BEGIN CHARACTERS;
	TITLE M2979;
	DIMENSIONS NCHAR=565;
	FORMAT DATATYPE = DNA MISSING = - GAP = #  ;
	MATRIX
		Micromeria_varia_FU14_FU13_FU15_FU16_etc       CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTAATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_benthamii_tenuis_GC40B              CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCC-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTNCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_varia_91                            CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTAATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATTTATA
		Micromeria_tenuis_107                          CCCCANAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCGTTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_leucantha_GC30A                     CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTCTGACTATTTACTCTCGGTGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTGTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTNCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_pineolens_GC36B_GC38_GC11A          CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTCTGACTATTTACTCTCGGTGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_tenuis_GC42                         CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTCTGACTATTTACTCTCGGTGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTAGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTNCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_lanata_GC6a                         CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATATACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----GTGCAATAATCTCATAATCGAAAAGTTGCCATCC-------ATAATGCTTGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTNCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_tenuis_110                          CCCCAGAATTTTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGTGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTMTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_tenuis_GC26A_GC44                   CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_lasiophylla_Ten46_Ten47_Ten49       CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCGTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATGTCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATGTAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCG----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTATCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_lachnophylla_Ten_52_Ten53_etc       CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTATTTACTCTCGATGGCAGATGTCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATGTAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCG----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTATCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_varia_lepida_GOFT7                  CCCCAGAATTCTGAAGAAGCAGTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAACGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAANAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTNAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCAAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_herpyllomorpha_LP22_LP19            CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAACGAGGTACTGTGACTAGTTACTGTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCAAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_teneriffae_Ten67_Ten66_etc          CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAACGAGGTACTGTGACTATTTGCTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_cf_varia_Ten23                      CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAACGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCAAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCGTTCCACTTATTTTGATCTATA
		Micromeria_hyssopifolia_HI17_HII8_etc          CCCCAGAATTCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAACGAGGTACTGTGACTATTTACTCTCGATGGCAGATATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACACAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCAAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAAGTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Micromeria_inodora                             CCCCAGAATCCTGAAGAAGCACTTCAGAGCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTACTGTGACTAGTTACTCTCGATGGCAGTTATCAGTTTATTTTATGTACTATGCTTATTTCTCCATTTCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACAATTGAAGGAGAAAAAGATTTGTCAAAATACTCATTGCCTCTGTGAGTACTGAATATAAAAAATTGGCATAATACCACAAAATTTGTTTCATTGAAAAGAGTCGCTAAGTGCTGATTATCATGCTCGTTGGGCAAATTATTGCT----ATGCAATAATCTCATAATCGAAAAGTTGCCATCT-------ATAATGCATGTTGAAGAAGATTGTCATATATGCTGCATCCAAACTCTTCTTTTCTCTTTCCTGATGTTTTCTGGTTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTATGTGGAAAATCCTTCTTTCCACTTATTTTGATCTATA
		Satureja_montana                               CCCCAGAATTCTGAAGAAGCACTTTAGATCAAAGCCTTACTATGTGGATCTGCTGGATTTGTTCAATGAGGTAATGTGAWTATTTTCTCTCGATGACAGGTATTAATTCATTT-ATGTGCTATGCTTATTTCTGCATATCATGTTTTCAGGTGGAGTTTCAAACTGCCTCTGGACAGATGATAGATTTAATTACCACTATCGAAGGAGAAAAGGATTTGTCAAAATACTCATTGCCTCTGTGAGTAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGACTGGC-AT----AATACCYCATGCTCGTTTAGCAAGTTATTGCATTGCATGCAWTAATCTCATAATTGAAAAGTTGGCATCTTTGCATTATACTGCATGTTGA-GAAGATTGTYGTTTATGCTGCATCYGAACTCTCYTTTTCTCTTTCCTAMTGTTTCCTGATTTTACTTTTTGCATCATCGCCGCATTGTTCATACAAGACTGCCTACTACTCATTTTACCTCCCCGTGAGTGGAAAATCCCTCATTCAACTAACTTTGATCTGTA
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 565 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;