NEXUS [File created by TreeBASE: 7/26/07 21:02:41] [Matrix accession#: M1519] BEGIN TAXA; TITLE M1519; DIMENSIONS NTAX=13; TAXLABELS Fusarium_sporotrichioides_M27246 Fusarium_sporotrichioides_IBT9969 Fusarium_sporotrichioides_IBT9950 Fusarium_sporotrichioides_IBT8804 Fusarium_sporotrichioides_IBT1906 Fusarium_pseudograminearum Fusarium_poae_U15658 Fusarium_poae_IBT9926 Fusarium_poae_BBA70744 Fusarium_langsethiae_IBT9990 Fusarium_langsethiae_IBT9956 Fusarium_kyushuense_BBA70813 Fusarium_kyushuense_BBA70812 ; END; BEGIN CHARACTERS; TITLE M1519; DIMENSIONS NCHAR=622; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Fusarium_sporotrichioides_M27246 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTATACCTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTAAACTATTTCGACGATCTTCAAGCTGGACGCGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCACTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCCTCCACATCCCGAAG----TTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGATTACCCTCAGTTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_sporotrichioides_IBT9969 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAACGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTACACGTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTGAACTATTTCGACGATCTTCAAGCCGGACGTGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCATTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCCCCCACATCCCGAGG----CTGACCATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGACTACCCTCAGTTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_sporotrichioides_IBT9950 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTATACCTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTAAACTATTTCGACGATCTTCAAGCTGGACGCGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCACTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCCTCCACATCCCGAAG----TTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGATTACCCTCAGTTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_sporotrichioides_IBT8804 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTACACGTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTGAACTATTTCGACGATCTTCAAGCCGGACGTGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCATTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCTGGCCTTGTTATTCCCCCACATCCCGAAG----CTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGACTACCCTCAGTTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTGTTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_sporotrichioides_IBT1906 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTATACCTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTAAACTATTTCGACGATCTTCAAGCTGGACGCGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCACTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCCTCCACATCCCGAAG----TTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGATTACCCTCAGTTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_pseudograminearum CGCCAACAGCAGCTGCTCAAGGTAGACCCTAAGCGACTACAGGCTTCTCTCCAAACAATCGTTGGCATGGTCGTATACAGTTGGGCAAAGGTGTCCAAAGAGTGCATGGCGGATCTATCTATTCACTACACCTACACTCTCGTTTTGGATGACAGCAGCGATGATCCTTATCCTGCTATGCTGAACTATTTTGGCGACCTTCAAGCCGGACGAGAGCAGGCCCATCCATGGTGGGCACTTGTCAACGAGCACTTTCCCAACGTCCTTCGCCATTTTGGACCCTTCTGCTCATTAAATCTTATCCGTAGCACGATGGACTGTAAGTAACTAACTTGGATTATATTATTTACCTGTATGAAGAAAGAAGCTGACGGCGGTGGAACGACAGTTTTTGAGGGATGCTGGATTGAGCAGTACAACTTTGGAGGATTCCCAGGATCTGATGACTACCCTCAATTCCTTCGACGCATGAACGGTTTGGGTCACTGTGTTGGGGCTTCTCTATGGCCCAAGGACCTGTTCGATGAGCGGAAGCATTTCCTTGAAATCACGTCAGCCGTTGCCCAGATGGAGAACTGGATGGTTTGGGTCAACGATCTCATGTCGTTCTACAAGGAATTCG Fusarium_poae_U15658 CGACAACAGCAGCTACTCAAGGTAGACCCTAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTATACAGTTGGGCAAAGGTCTCTAAAGAGTGTATGGCGGATCTATCTATTCATTACACGTACACGCTCGTTTTGGATGACAGCAGCGACGACCCATATGCAGCCATGATGAACTATTTCAACGATCTTCAGGCCGGACGAGAACAGGCTCACCCGTGGTGGGCGCTTGTCAATGAGCACTTTCCCAATGTCCTTCGACATTTTGGTCCCTTCTGCTCGTTGAACCTTATCCGCAGCACTCTTGACTGTAAGTA-----CACTGGATACATTGTTTCACCACGACATGAAA----CTGACAGTTATGGAATTAAAGTTTTTGAGGGATGCTGGATCGAGCAGTACAACTTTGGAGGATTCCCAGGATCCCATGACTATCCTCAGTTTCTTCGACGCATGAATGGCTTGGGTCACTGTGTCGGGGCTTCTTTGTGGCCCAAGGAGCAGTTTGATGAACGAAGTCTATTCCTTGAAATCACATCAGCCATTGCTCAGATGGAGAACTGGATGGTCTGGGTCAACGATCTTATGTCATTCTACAAGGAATTCG Fusarium_poae_IBT9926 CGACAACAGCAGCTACTCAAGGTAGACCCTAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTATACAGTTGGGCAAAGGTCTCTAAAGAGTGTATGGCGGATCTATCTATTCATTACACGTACACGCTCGTTTTGGATGACAGCAGCGACGACCCATATCCAGCCATGATGAACTATTTCAACGATCTTCAGGCCGGACGAGAACAGGCTCACCCGTGGTGGGCGCTTGTCAATGAGCACTTTCCCAATGTCCTTCGACATTTTGGTCCCTTCTGCTCGTTGAACCTTATCCGCAGCACTCTTGACTGTAAGTA-----CACTGGATACATTGTTTCACCACGACATGAAA----CTGACAGTTATGGAATTAAAGTTTTTGAGGGATGCTGGATCGAGCAGTACAACTTTGGAGGATTCCCAGGATCCCATGACTATCCTCAGTTTCTTCGACGCATGAATGGCTTGGGTCACTGTGTCGGGGCTTCTTTGTGGCCCAAGGAGCAGTTTGATGAACGAAGTCTATTCCTTGAAATCACATCAGCCATTGCTCAGATGGAGAACTGGATGGTCTGGGTCAACGATCTTATGTCATTCTACAAGGAATTCG Fusarium_poae_BBA70744 CGACAACAGCAGCTACTCAAGGTAGACCCTAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTATACAGTTGGGCAAAGGTCTCTAAAGAGTGTATGGCGGATCTATCTATTCATTACACGTACACGCTCGTTTTGGATGACAGCAGCGACGACCCATATCCAGCCATGATGAACTATTTCAACGATCTTCAGGCCGGACGAGAACAGGCTCACCCGTGGTGGGCGCTTGTCAATGAGCACTTTCCCAATGTCCTTCGACATTTTGGTCCCTTCTGCTCGTTGAACCTTATCCGCAGCACTCTTGACTGTAAGTA-----CACTGGATACATTGTTTCACCACGACATGAAA----CTGACAGTTATGGAATTAAAGTTTTTGAGGGATGCTGGATCGAGCAGTACAACTTTGGAGGATTCCCAGGATCCCATGACTATCCTCAGTTTCTTCGACGCATGAATGGCTTGGGTCACTGTGTCGGGGCTTCTTTGTGGCCCAAGGAGCAGTTTGATGAACGAAGTCTATTCCTTGAAATCACATCAGCCATTGCTCAGATGGAGAACTGGATGGTCTGGGTCAACGATCTTATGTCATTCTACAAGGAATTCG Fusarium_langsethiae_IBT9990 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTACACGTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTAAACTATTTCGACGATCTTCAAGCCGGACGTGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCATTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCC-CCACATCCCGAAG----CTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGACTACCCTCAATTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_langsethiae_IBT9956 CGCCAACAGCAGCTACTCAAGGTAGACCCCAAGCGACTACAGGCTTCCCTCCAAACAATCGTTGGCATGGTCGTGTACAGTTGGGCAAAGGTCTCTAAAGAATGCATGGCCGATCTATCTATACATTACACGTACACTCTCGTTTTGGACGATAGCAAGGATGACCCGTACCCAACCATGGTAAACTATTTCGACGATCTTCAAGCCGGACGTGAACAAGCCCATCCGTGGTGGGCACTCGTCAACGAGCACTTTCCCAATGTCCTTCGGCATTTTGGTCCCTTCTGCTCATTGAACCTTATTCGCAGCACTCTGGACTGTAAGTA-----CCCCGGCCTTGTTATTCC-CCACATCCCGAAG----CTGACAATGATGGAATTATAGTTTTCGAGGGATGCTGGATCGAACAGTACAACTTTGGAGGATTTCCAGGATCTCATGACTACCCTCAATTTCTTCGACGTATGAACGGCTTGGGTCATTGTGTCGGGGCTTCTCTATGGCCCAAGGAGCAGTTCAATGAGCGAAGTCTATTCCTTGAGATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTCTGGGTCAATGATCTTATGTCATTCTACAAGGAATTCG Fusarium_kyushuense_BBA70813 CGCCAACAGCAGCTGCTCAAGGTAAACCCCAAACGACTACAGGCTTCCCTCCAAACAATTGTTGGCATGGTCGTATACAGTTGGGCAAAAGTCTCCAAAGAGTGTATGGCGGATCTCTCCATTCATTACACCTACACGCTCGTTTTGGATGACAGCAGCGATGATCCGTACCCAGCCATGATGAACTACTTCAACGATCTTCAAGCTGGGCGAGAACAGGCCCATCCGTGGTGGGCGCTTGTTAATGAGCACTTCCCTAATGTCCTCCGTCATTTCGGTCCCTTCTGCTCGTTGAATCTTATCCGCAGCACTCTCGATTGTAAGTA-----CCCTGACTATATCAATTCACCGCCTCAGAAAA----CTGACCGCGATCGAATCACAGTTTTTGAAGGATGCTGGATCGAGCAGTACAACTTTGGAGGATTTCCAGGATCCCATGATTATCCTCAGTTTCTTCGACGCATGAACGGCTTAGGCCATTGTGTCGGGGCTTCTTTGTGGCCCAAGGAGCAGTTTGATGAGCGAAGTCTGTTTCTTGAAATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTTTGGGTCAATGATCTTATGTCGTTCTACAAGGAATTCG Fusarium_kyushuense_BBA70812 CGCCAACAGCAGCTGCTCAAGGTAAACCCCAAACGACTACAGGCTTCCCTCCAAACAATTGTTGGCATGGTCGTATACAGTTGGGCAAAAGTCTCCAAAGAGTGTATGGCGGATCTCTCCATTCATTACACCTACACGCTCGTTTTGGATGACAGCAGCGATGATCCGTACCCAGCCATGATGAACTACTTCAACGATCTTCAAGCTGGGCGAGAACAGGCCCATCCGTGGTGGGCGCTTGTTAATGAGCACTTCCCTAATGTCCTCCGTCATTTCGGTCCCTTCTGCTCGTTGAATCTTATCCGCAGCACTCTCGATTGTAAGTA-----CCCTGACTATATCAATTCACCGCCTCAGAAAA----CTGACCGCGATCGAATCACAGTTTTTGAAGGATGCTGGATCGAGCAGTACAACTTTGGAGGATTTCCAGGATCCCATGATTATCCTCAGTTTCTTCGACGCATGAACGGCTTAGGCCATTGTGTCGGGGCTTCTTTGTGGCCCAAGGAGCAGTTTGATGAGCGAAGTCTGTTTCTTGAAATTACATCAGCCATTGCCCAGATGGAGAACTGGATGGTTTGGGTCAATGATCTTATGTCGTTCTACAAGGAATTCG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 622 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;