#NEXUS [written Wed Apr 07 15:09:37 EDT 2010 by Mesquite version 2.72 (build 527) at Macintosh-4.local/140.247.98.22] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=34; TAXLABELS Chenopodium_album Chenopodium_murale Atriplex_pleiantha Atriplex_suckleyi2_H95_UC Atriplex_covillei1_811 Atriplex_covillei2_953 Holmbergia_tweedii1_H89 Holmbergia_tweedii2_H17 Grayia_spinosa1_566 Grayia_spinosa2_1019 Zuckia_brandegeei_brandegeei_H38 Zuckia_brandegeei_arizonica2_H78_9115 Zuckia_brandegeei_plummeri Atriplex_californica3_1025 Atriplex_joaquiniana2_306 Atriplex_joaquiniana1_BE12 Atriplex_hortensis1_667 Atriplex_prostrata2_309 Atriplex_prostrata1_204 Atriplex_rosea Atriplex_patula Atriplex_leucoclada Atriplex_amnicola Atriplex_suberecta2_HF9 Atriplex_suberecta1_JeGr8 Atriplex_cinerea Atriplex_rusbyi Atriplex_patagonica Atriplex_peruviana Atriplex_seren_seren Atriplex_phyllostegia1_H84 Atriplex_phyllostegia2_992 Atriplex_watsonii Atriplex_lentiformis2_520 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1588; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Chenopodium_album TCGAAACCTGCCCAGCAGAgCGACCAGAGAACATGTTTaTCATGAACGGGGATGTGGTGAAAGCCCCATCCCTAAGCTGGGATGGTACTCCGCCTCGGTGGGGTATcTTCTC-AGCACAATAAcGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGAtACAAGTGTGCCCTTcTTCAGCTGGTTC--GCCAGATGTAGAGGTGGCACCAAGTcGTATATAACATTAAACGACTCTcGGCAACGGATATcTcGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTcTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTcTCCCCCC-ACCC-aCCTTGAGTGG---GAg-GGGTGGAGGATGATGGCCTCCCATGCCTCACCGGGTGtGGATGGCCTAAATAcGGAGCCCCCGGTTATGAAGTGCCGCGGC-ATAGGTGAGATACAAGGCCTAGCCTAgGATACA-TcGGAgTCGCGCACTTTTTAgCTTTTGAGGACTCGCAGGACCCTA-AGTTTGTTTGCCCAT-TaGGGCATCAAAACCGTTGCGACCCCaG???????????gtggtgattggttt?TTTGGCTGGCGGGCTCCAtGCTTGTGCATTGAACCGCACGCTGATAAACCTCTTCAKTGTTTGCTCCAA-TGCGGTAAGCCTTGGGCGAGGTATGGTTTTCTGTGTTTTATTCCTAATGATGGTATTGATGTCCATG-TAAATCTTTTGTTTCCGCCTGACATCCTTTT-GGG--TGTCTGGTGGACCT-TGTAGCTGGGTCCGTCCTCCAACCTCAACGGCAAAAATCAAGCGTTGTTGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCACATACCTAATTCAGCGTTTT-ACGCTAAGCACGAACGACGTCCGTGTACGAGTTGACTCTTTCCGTTAAAAGGGAGAGcTCATGCGTGCCGGTgtcgaacgaggagtgctacctg???????????TCttgtgctagaactttGTCtcgtaaACACAAAAGTACTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAACGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCTAAACGAA-----TGGGGG-ATAAGAAAAAAA--TTCATTTTTCTACTTTCTACTGAAATGTTTATGGAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTCCCCTCGGAGGGGAACTAAGTTTGAAATTTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGGTTTTtC-TTTtttt------AACAagGAAattaTctac?????? Chenopodium_murale TcGAAACCTGCCCAGCAGAgCGACCAGAGAACATRTTTATCATGAACGGGGATGTGGTGAAAGCCCCATCCCTAAGCTGGGATGGTACTCCGCCTCGGTGGGGTATcTTCTC-AGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGATACAAGTGTGCCCTTCTTCAGCTGGTTC--GCCAGATGTAGAGGTGGCACCAAGTcGTATATAACATTAAACGACTCTcGGCAACGGATATcTcGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTcTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCC-ACCTTCAGTGG---GAg-GGGCGGAgGATGATGGCCTCCCATGCCTCACCGGGTGTGGATGGCCTAAATACGGAGCCCCCGGTTATGAAGTGCCGCGGC-ATAGGTGAGATACAAGGCCTAGCCTAgGATACA-TcGGAGTCGTGCACTTTTTAgCTTTTGAGGACTCGCAGGACCcTA-AGTTTGTTTGCCCAT-TGGGGCATCAAAACCGTTGCGACCCCaG??????????agtggtgat?ggtttTTTTGGCTGgCGGGCTCCAtGCTTGTGCATCGAACcGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAA-TGCGGTAAGCCTTGGGCGAGGTATGGTTTTCTGTGTTTTATTCCTAATGACGGTATTGATGTCCATG-TAAATCTTTTGTTTCCGCCTGACATCCTTTT-GGG--TGTTTGGTGGACCT-TGTAGCTGGGTCCGTCCTCCAACCTCAACGGCGAAAATCAACCGTTGTTGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCACATACCTAATTCAGCGTTTT-ACGCTAAGCACGAACGACGTCCGTGTACGAGTTGACTCTTCCCGTTAAAAGGgAGAGCTCaTGCGTGCCGGtgtcgaacgaggagtgctacctg???????????tCTTGTgCtagaactttGTCtCgtaaACaCAAAAGTACTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAACGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCTAAACGAA-----TGGGGG-ATAAGAAAAAAA--TTCATTTTTCTACTTTCTACTGAAATGTTTATGGAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTCCCCTAGGAGGGGAACTAAGTTTGAAATTTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGGTTTttC-TTTtttt------aACAagGAaaTTatctactcca?? Atriplex_pleiantha TCGAAaCCTGCCTAGCAGAGTGACCAGAGAACGTGTTTATCATGAACGGGGAGGTGGCGAAAGCCCCCTCCCCATGCCGGGGAGGCGGTTCGCCTcGGCGGGACGCCCTCCC-GGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGATACAAGCGTGCCCTTTCGCGGCCGGTTCT-GTcGGCTGCGGAGGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTcGGCTCTCGCATCGATGAAGAAcGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAACCTTTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTAGTGCGG---GAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTTcGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGAAAGCA-TCGCAGTCGCGCACATCGTATCTCTTGAGGACTCGCAGGACCCTT-GGTT-GTTTGCCCTT-AGGGGCGGCAAAACCGTTGCGACCCCAG???????????????????????????????????????????????TTgtGCATcgaACCgCaCGcTGAtAAACCTcTTCaTTGTTTGCTCCaAGtGCaAtAAgCCTTGGGCGaGGtACGGTTTTCTGtGTTTTATTCCTAAtGaCGGAATTgTTGTCCa---TGAATCaTTTCTTTCCGTCAGaCaCCCTTT-CGGG--TGTTCGGTGGACCTTTGTAGCTGGGCCCGTCCACCTACcTCAACGGCGAAAACCAAGCGTTGATGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACTTCCGCGCACGGGTTGACCCTCCTCgTCAaAAGGGAgggCTCATgcgtgcaggtgTcGaaCGAggagTGcTAcCtg???????????tcttgtgctagaactttgtctcgtaaacaCAAAaGTaCTGTaCGCGCTTTTTTGAAAaGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTGCTTTCTTTGATCTTACCAAAAGATTTTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCGAAATCCAATTTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATTCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTTATTGAGTATTCAACTTTGTTTGAGCTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGGTTttTCTTTtttttt-----aACAaagaaattatctactccatc Atriplex_suckleyi2_H95_UC tCGAAACCTGCCCaGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGGAGCGGCGAAAGCCACTTCCCCGCGACGGGG-----------------------TCTCCCC-GTCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGGATACAAGCGTGCCCTTCTGCGGTCGGCTTT-GCCGGGCGTGGATGCGGCACCAAGTCGTAYATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTCGCGTGG---GAGCGGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCCAGCCTAGGAAGCA-TCGCAGCCGCGCACGTCGTATCCCACGAGGACTCGCAGGACCCTTTAGTT-GTt-----------------------GTTGCGACCCCAGtcacgtgtggagtggtgattggtttttttggctggcgggctccatgcttgtgcatcgaaccgcacGCTGATAAACCTCTTCAGtGtt-GcTCCaagtGcTGtaAGCCTTGggcGAGGTATGGTTTTCTGtGTTTCATTCctAAtGAAGGtattGATGTCCCGTTCAAATCAATCGATTCCGTCAGACATCCTTT-CGGGGGTGTTCGGTGGACCTATGTAGCTGGACCCGTCCTCCTACCACAGCGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGggAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGGACGATGTCCGAGCACGAGTtgaCCCTCCACgTCAAAAGGgagggctcatgcgtgccggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctcgaactttgtctcgtaaacacaaaagtactgtacgtgcttttttgaaaagattaggttcagaattgttcgaagaattctttacagaggacgaaaaagttctttctttgatcttaccaaaagattcttctatctcacggggattccatagagggcgcatttggtatttggatatt?tttgtatccacaatttgtccaatgataaatgattgattatgagactgtctaaatcaaatttcgattctatctaaacgaatggggtggggggataagataaaaaaattca---tttatttttctactgaaatctttat----taagggttgaatttattgagtattcaactttgtttgagctccctatgaggggaactgagtttgaaatgtatacatagggaaagccgtgtgcaatgaaaaatgcaagcacggtttggggaggggtttttctttt?tttt-----aacaaggaaattatctactccatc Atriplex_covillei1_811 TcGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGAGGCGGCGAAAGCCTcATCCCCACGCCGGGGAGGCGGTCCGCCACGGCGGGGCGCCCTCTc-GGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGATACAAGTGTGCCCCCCTGCGGCCGGTTT--GCCGGTGGCGGGGGCGGCACCAAGTcGTACATAACATTAAACGACTcTCGGCAAcGGATATcTcGGCTCTCGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTgTGAATTGCAgAATCCCGTGAACCATCGAGTCTTTgAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATCGcGTcTCCCCCCCaCCCCACCTcGCGTGGAAGGAg-GGGCGGAGGAGGATGGCCTCCCATGCCTcACCGGGCGTGGATGGCCTAAATAAgGAGCCCCCGGTTgCGAAgTgCCGCGGCGATTGGTGGAAgACAAGGCCTAGCCTAgGAAgcA-TcGCADCCGCGCACGTcGCATcTcTTgAGGACTCGCAGGACCCTT-AgTT-GCTcGCCCTY-AgGGGCGGCAAAACCTTTgCGACCCCaG?cacgtgtg-agtggtgattggtttTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCAATAAGCCTTGGGCGAGGTACGGTTTTCTGTGTTTTATTCCTAATGACGGTATTGTTGTCCATTATAA-TCGTTTGATTCCGTCAGACATCCTT--CGGGG-TGTTCGGTGGACCTGTGTAGCTGGGCCCGTCCTCCTACCTCAATGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGATCCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCTAGTTAAGCGTTTTTACGCTAAGCACGGACGACGTCCGCGCACGAGTTGACCCTCCTCGTCAAAAGGGAGGGCTCATGCGTGCCGGTGTCGAACGAGGAGtgctacctggttgatcctgctCTTGTgCTagAACtttgtctcgtaaacaCAAAAGTACTGCACGTGCTTTTTTGAAAAGATTAGGTTCAGCATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTAGTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGAGGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCGATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGaTTTTCCTTTTTttt------AaCAagGAAATtatctactccatc Atriplex_covillei2_953 tCGAAaCCTGCCCaGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGAGGCGGCGAAAGCCTCATCCCCACGCCGGGGAGGCGGTCTGCCACGGCGGGGCGCCCTCTC-GGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGGATACAAGTGTGCCCCCCTGCGGCCGGTTT--GCCGGTGGCGGGGGCGGCACCAAGTCGTACATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCCCACCCCACCTCGCGTGGAAGGAG-GGGCGGAGGAGGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTGCGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAGCCGCGCACGTCGCATCTCTTGAGGACTCGCAGGACCCTT-AGTT-GCTCGCCCTC-AGGGGCGGCAAAaCCTTTGCGACCCCAGtcacgtgtg-agtggtgattggtttttttggctggcgggctccatgcttgtgcaTCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCAATAAGCCTTGGGCGAGGTACGGTTTTCTGTGTTTTATTCCTAATGACGGTATTGTTGTCCATTATAA-TCGTTTGTTTCCGTCAGACATCCTT--CGGGG-TGTTCGGTGGACCTGTGTAGCTGGGCCCGTCCTCCTACCTCAATGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGATCCTAGTTGTGCCCTGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCTAGTTAAGCGTTTTTACGCTAAGCACGGACGACGTCCGCGCACGAGTTGaCCCTCCTCGTCAAAAGGGAGGGCTCATGcgtgccggtgtcgaacgaggagtgctacctg???????????tcttgtgctagaactttgtctcgtaaacacaaaaGTACTGcACGTGCTTTTTTgAAAaGAtTAGGTTCAGCATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTAGTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGAGGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCGATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTtGGGGAGGGattttccttttttt-------aacaaggaaattatctactccatc Holmbergia_tweedii1_H89 TCGAAaCCTGCCCaGCAGAGCAACCAGAGAACATGTTTATCATGAACGGGGAAGTGGCGAAAGCCCCTTCCCCATGCTGGGGAGGCGGTCCACCGCGGTGGGACGCCCTCCC-GGCACAATAACGAACCCCGGCGCGGTCCGCGCCAAGGAACATGGATACAAGTGTGCCCTTCCGCAGCCGGTTT--GCCGGCCGCGGAGGCGGCACCAAGTCGTACATAACATTTAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCCCACCC-ACCTCGTGTGG---GAA-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCC-GGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAGTCGCGCACATCGTATCTCTTGAGGACTCGCAGGACCCTT-AGTT-GTTCGCCCTT-AGGGGCGGCAAAACCGTTGCGaCCCCAGtcacgtgtg-agtggtgattggtttttttggttggcgggctccatgcttgtgcattgaaccgcacgctgataaacctcttcagtgTTTGCTCCAAGTGCAATAAGCCTTGGGCGAGGTACGGTTTTCTGTGTTTTATTCCTAATGACGGTATTGTTGTCCA-TATAAATCATTTATTTCCGTCAAACACCCTTT-CGGG--TGTTCGGTGGACCTATGTAGCTGGGCCCGTCCTCCTACCTCAATGGCGAAAACCAAGCATTGTTGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGTGCACGAGTTGaCCCTCCTCgTCAAAagggagggctcatgcgtgccggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaacacaaaagtACTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAATTTTTCGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATTCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTtgGGgAGGGgttttt---------------aacaaggaaattatctactccatc Holmbergia_tweedii2_H17 TcGAAACCTGCCCAGCAGAGCAACCAGAGAACATGTTTATCATGAACGGGGAAGTGGcGAAAGCCCcTtCCCCATGcTGGGGAGgCAGTCCACCGCGGTGGGACGCCCTcCC-GGCACAATAAcGAACCCCGGCGCGGTCCGCGCCAAGGAACATGGATACAAGTGTGCCCTTCCGCAgCCGGTTT--GCCGGCCGCGGAGGCGGCACCAAGTcGTACATAACATTTAACGACTcTCGGCAACGGATATcTCGGCTCTCGcATCGATGAAgAACGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCCCaCCC-aCCTcGTGTGG---GAA-GGGCGGAGGATgATGGCCTCCCATGCCTCACCGGGcGTGGATGGCCTAAATAAGGAgCCCC-GGTTACGAAgTGCCGCGGCGATTGGTGGAAgACAAGGCCTAGCCTAGGAAGCA-TcGCAGTcGCGCACATcGTATcTcTTGAGGAcTCGCAGGACCCTT-AgTT-GTTCGCCCTT-AGGGGCGGCAAAACCGTTGCGACCCCAG?cacgtgtg-agtggtgattggttttTTtGGTTGGCGGgCTCCaTGCTTGTGCATTGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCAATAAGCCTTGGGCGAGGTACGGTTTTCTGTGTTTTATTCCTAATGACGGTATTGTTGTCCA-TATAAATCATTTATTTCCGTCAAACACCCTTT-CGGG--TGTTCGGTGGACCTATGTAGCTGGGCCCGTCCTCCTACCTCAATGGCGAAAACCAAGCATTGTTGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGTGCACGAGTTGACCCTCCTCGTCAAAAGGGAGGGCTCATGCGTGCTgGTGTcgAAcGAGGAgtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaacacaaaagtactgtacgtgcttttttgaaaagattaggttcagaatttttcgaagaattctttacagaggacgaaaaagttctttctttgatcttaccaaaagattcttctatctcacggggattctatagagggcgcatttggtatttggatattatttgtatccataatttgtccaatgatgaatgattgattatgagactgtctaaatcaaatttcgattctatctaaacgaatggggtggggg-ataagataaaaaaattca---ttcatttttctactgaaatgtttatgcagtaagggttgaattcattgagtattcaactttgtttgagctccctatgaggggaactgagtttgaaatgtatacatagggaaagccgtgtgcaatgaaaaatgcaagcac?????????????????????????????????????????????????????????? Grayia_spinosa1_566 TcGAAACcTGCCcAGcAgAGcGAcCAgAgAAcGTGTTTAACATgAACGGGGAAgcGGcGAAAGCCCCTTCCCCATGCTRGGAAgGCGGTCCGCCTcGGCGGGGCGCCCTCCC-GGCACAATAAcGAACCCCGGcGCGGTcTGcGCCAAgGAACAtGGAtACAAGTGTGCCCTTCCgCGGCCGGTTc--GCCGGcTgCGGAGGMGGCaCCAAGTcGTATATAACATTAAACGACTcTcGGCAAcGGAtATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTgTGAAtTGCAGAATcCCGTGAACCATcGAGTcTTTgAACGCAAGTTGcGCCCGAAACCTTTAGGTcgAGGGCAcGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCC-aCCCCaCCTcGCGTgG---GAg-GGGMGGAgGATgATGGCCTcCCATGCCTcACCGGGcGtGGATGGCCTAAATAcGGAGCCCCCGGTTAcgAAgTGCCGCGGCGATTGGTGGAAgACAAGGCCTAGCCTAGGAAgcA-TcGCAaTcGcGCACATcGTATcTcTTGAGGACTcGCAGGACCCTT-ATcT-GTTcGCCCTC-AGGGGCGGCAAAACCGTTGCGACCCCAG?cacgtgtg-agtggtgattggtttttttGGTTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCTATAAGCCTTGGGCGAGGWAAGGTTTTCTGTRTTTTATTCCTAATGTCGGTATTGTTGTCCATT-TAARTCATTCGTTTCCGTCAGACATCCTT-YYGGG--TGTTCGGTGGACCTATGTAGCTGGGCCCGTCCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCCCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGCGCACGAGTTGACCCTCCCTGTCAAAAGGGAGGGCTCATGCGTGCCGGTgTCGAAcGAGGAGtgctacctggttgatcctgc??ttgtgctagaactTtGTCtcgtaaACACAAAAGTACTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGATTGTCTAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGATTTTtCTTTTtttt------AACAaGGAaaTtatctactccat? Grayia_spinosa2_1019 tcgaAACCtGCCcaGCAGAgCGAcCAGaGAACGTGTTTAAYATGAACGGGGAaGCGGCGAAAGCccCTTcCccATGCTRGGAAGGCGGTcCGCCTcGGCGGGGCGCcCTCTC-GGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGATACAAGTGTGCCcTTcCGCGGCCGGTTc--GCCGGCTGCGGAGGMGGCACCAAGTcGTATATAACATTAAACGACTcTcGGCAACGGATATcTcGGCTcTcGCATcgATGAAGAAcGTAGCGAAATGCGATACTTGGTGTGAATtGCAGAATCCCGTGAACCATcGAGTcTTTGAACGCAAGTTGCGCCCGAAACCTTTAGGTcGAGGGCACGCcTGCCTGGGCGTCACGCATCGCGTCTCCCCcC-ACccCACCTcGCGTGG---GAg-GGGCGGAgGATGATGGCcTcCCATGCCTCACCGGGCGTGGATGGCCTAAATACGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAgACAAGGCcTAGCcTAGGAAGCA-TcGCAGTCGCGCACATcGTATCTcTTGAGGACTCGCAGGAcCCTT-ATCT-GTTCGCcCTC-AGGGGCGGCAAAACCgtTGCgACCCCag?????????-agtggtgattggtttttttGGttGGCgGGctccatGcttgtGcAtcgAACCGCACGCTGAtAAAcCtCTTCaGtGTTtGCTcCAAGtGCTATAAGcCTtGGGCGAGGWAAGGTTTtCTGTRTTTTATtCCTAAtGTCGGTATtGTTGTCCATT-TAAgTCATtCGTTtCCGTCAGACAtCCTT-??GGG--TGTTCGGTGGACCTATGTAGCTGGGCCCGTCCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCCCTAGTTGTGCCCCGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCGcATACCCAGTTAAGCGTTTT-ACGCtAAGCACGAACGACGTCCGCGCACGAGTTgACCCtCCCYGTCaaAAGGgAGgGcTCaTgCgTGCCGgtgtcgaacgaggagtgctacctg???????????tct?gtgctAGaactttGTCtcgtaaacacaaaAGtactGTACGtGCTtttttGaAAAGAttaGGtTCAGAATttttaGAAGAAtTCTttaCAGAGGACGAAAAAgtTCTtTCTTTGATCTTaCCAAAAGAtTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTtGGTAtttGGATAtTATTTGTATCCATAATTtGTCCAATGATGAATGATTGATTATGAGATTGTCTAAATCAAATtTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATGCA---TTCATtTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTGAGTTTGAAATGTATACaTAGGGaaAGCCGTGTGCaATGAAAAATGCaAGCaCGGTTTGGggAGGgaTTTTTCTTTttttt------aacaaggaaattatctactccatc Zuckia_brandegeei_brandegeei_H38 TCGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTAACATGAACGGGGAAGCGGCGAAAGCCCCTTCCCCATGCTGGGGAGGCGGTCCGCCTCGGCGGGACGCCCTCCC-GGCAYAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGGATACAAGTGTGCCCTTCCGCGGCCGGTTC--GCCGGCTGCGGAGGCGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTCGCGTGG---GAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAGTCGCGCACATCGTATCTCTTGAGGACTCGCAGGACCCTT-ARCT-GTTCGCCCTR-AGGGGCGGCAAAACCGTTGCGACCCCAGtcacGtgtG-AgtgGtgattggtttttttggttggcgggctccAtGCtTgTGCATCGAACCGCACGCTGATARACCTCTTCAGTGTTTGCTCCAAGTGCAATAAgCCTTGGGCGAGGTAAGGTTTTCTGTGTTTTATTCCTAATGTCGGTATTGTTGTCCCTT-TAAATCATTCATTTCCGTCAGACATCCTT-CCGGG--TGTTCGGTGGACCTATGTAACTGGGCCCGTCCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCCCTAGTTGTGCCCCGGGATGCAGAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGCGCACGAGTTGACCCTCCCCGTCAAAAGgGAgGGCTCATGCgtgccRgtgTCgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaACacaaaAGTaCTGTacGtGCTtTtTtGAaaaGaTtagGTTCagAATTtTtAgAAGaAtTCTTtACAGAGGACGAAAAAGTTCtTTCTTTGAtCtTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTatTTGGATAttAttTGTATCCATAATTTGTCCAATGATGAATGATTGATTATgAGACTGTCTAAATCAAATTTCGATTCTATCTAAaCGAATGGGGTGGGGG-ATAaGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAatTCATtGAGTAtTCAACTtTGtTTGAGTTCCCTATGaGGGGAACTgAGTTTGAAATGtATACATAgGGAaAgCCGTGtGCAAtGAAAAATGCAaGCACGGTTTGgGgAGGGatttttctttttttt------aacaaggaaattatctactccatc Zuckia_brandegeei_arizonica2_H78_9115 TCGAaaCCTGCCCAGCAGAGCGACCAGAGAACGTGTTTAACATGAACGGGGAAGCGGCGAAAGCCCCTTCCCCATGCTGGGGAGGCGGTCCGCCTCGGCGGGACGCCCTCCC-GGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATGGATACAAGTGTGCCCTTCCGCGGCCGGTTC--GCCGGACTCGGAGGCGGCACCAAGTcGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTCGCGTGG---GAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAgTCGCGCACATCGTATCTCTTGAGGACTCGCAGGACCCTT-AGCT-GTTCGCCCTG-AGGGGCGGCAAAACCGtTGCGACCCCAGtcacgtgtg-agtggtgattggtttttttggttggcgggctccatgcttgtgcatcGAaCCGCACGCTGAtAAACCTCTTCaGTGTTtGCTCCAaGTGCAATAAGCCTTGGGCGAGGTAGGGTTTTCTGTGTTTTATTCCTAATGTCGGTATTGTTGTCCCTT-TAAATCATTCATTTCCGTCagACATCCTT-CCGGG--TGTTCGGTGGACCTATGTAGCTGGGCCCGTCCTCCTACCtcaATGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCCCTAGTTGTgCCCCGGGATGCAgAAtgttGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGcTAAGCACGAACGACGTCCGCGCACGAGTTGaCCCTCCCCGTCAAAAGGGAGGGcTCATgcgtgccggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaacacaaaagtactgtaCgTGCTTTTTTgAAAaGaTtAggTTCagAATTTTTAgAAgAATTCTttaCagAGGACgAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAgAGGGCGCATTTGGtATTTGGATATtATTTGTATCCATAATTTGTCCaATGAtGAATGAttGATTatgaGACTGTCTAAATCAAATTTCGATTCTATCtaaacGAAtGGGGTGGGGG-AtaaGAtAAAAAAAtGCA---TTCATTTtTctacTgaAATgTTTATgCaGTAAGGgTtgaattCAttGAGTAtTCAActtTGTTTGAGTTCCCTatgaggggaactgaGTttgaaatGTATACATAGGGAAAgCCGTGtgCAATGAAAAATgCAAGCACGGTTTGgggagggatttttctttttttt------aacaaggaaattatctactccatc Zuckia_brandegeei_plummeri tCGAAaCCTGCCCaGCAGAGCGACCAGAGAACGTGTTTAACATGAACGGGGAAGCGGCGAAAGCCCCTTCCCCATGCTGGGGAGGCGGTCCGCCTCGGCGGGACGCCCTCCC-GGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGGATACAAGTGTGCCCTTCCGCGGCCGGTTC--GCCGGAcKCGGAGGCGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTCGCGTGG---GAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAMGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAGTCGCGCACATCGTATCTCTTGAGGACTCGCAGGACCCTT-AKCT-GTTCGCCCTS-AGGGGCGGCAAAACCGTTGCGACCCCAGtcacgtgtg-agtggtgattggtttttttggttggcgggctccaTGCTTGtGcaTCGAACCGCACGCTGATAAACCTCTTCAGTGKTTGCTCCAAGTGCAATAAGCCTTGGGCGAGGTASGGTTTTCTGTGTTTTRTTCCTAATGWCGGTATTGTTGTCCMTT-TAAATCAYTCRTTTCCGTCAGACATCCTT-CYGGG--TGTTCGGTGGACCTATGTAGCTGGGcYcGTCCYCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTCAGGTGTACGGTCCCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGGCGTTCATTCGTCGCATACCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGCGCACGAGTTGaCCCTCCCCgTCAAAAGGGAGGGCTCATgcgtgccggtgtcgaacgaggagtgctacctg???????????tcttgtgctagaactttgtctcgtaaacacaaaagTACtgTACGTGCTTTTTTgaAAaGAtTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGATTGTCTAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTTAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGatttttctttttttt------aacaaggaaattatctactccatc Atriplex_californica3_1025 tCGAAaCCTGCCCaGCAGAGCGACCAGAGAACGTGTTTAACATGAACGGGGAAGCGGCGAAAGCCCCTTCCCCATGCCGGGGAGGCGGTCCGCCTAGGCGGGACGCCCTCCC-GGCGCAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATAGATACAAGCGTGCCTTTCCGCGGCCGGCTTTTGCCGGCAGCGGAGGCGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACCCCACCTCGCGTGG---GAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCCTAGCCTAGGAAGCA-TCGCAGCCGCGCACATCGTATCCCTTGAGGACTCGCAGGACCCTT-AGCT-GTTCGCCCTC-AGGGGCGGCAAAACCGTTGCGACCCCAGtcacgtGtg-agtggtgattggtttttttggctggcgggctccatgcttgtgcatCGAACCgCACGCTGATAAACCTCTTCaGTGTTTGCTACAAGTGCGGGAAGCCATGGGCGAGGTACTGTTTTCTGTGTTTCATACCTAGTGACGGTATTGTTGTCCTTT-TAAATCGTTTGTTTCCGTCAGACATCCTTT-CGGG--TGTTCGGTGGACCCATGTAGCTGGGCCTGTCCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTTAGGCGTACGGTCCCAAGCTGTGCCCCGGGATGCAGAATGTTGAGGGGGTATGGGCGTTCATTCGTCGCATGCCCAGTTAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGTGCACGAGTTGaCCCTCCCCGTCGAAAGGGAGGGcTCATGcgtgccggtgtcgaacgaggagtgctacctg???????????TCTtgtgctagaactttgtctcgtaaacacaaaagTACTGTACGTGCTTTTTTGAAAaGAtTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGGGGATTCTATAGAGGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCGAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGGGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATGTTTATGCAGTAAGGGTGGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAAtGAAAAATGCAAGCACGGTTTgGGGAGGGatttttcgttttttt------aacaaggaaattatctactccatc Atriplex_joaquiniana2_306 TcGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTaACATGAACGGGGGAGCGGCGAAAGCCCCTTCCCCATGTCGGGGcGGCGGTCCGCCTAGGCGGGACGCCGTGTc-GGcGCAATAAcGAACCCCGGCGCGGTcTGcGCCAAGGAACATGGAtACAAGcGTGCCCTTCCGCGGCCGGTTc--GCCGATcGTGGAGGCGGCaCCAAGTcGTATATAACATTAAACGACTcTcGGCAACGGATATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCgAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCC-aCCCCACCTcGCGTGG---GAgC-GGCGGAgGATgATGGCCTCCCATGCCTcACCGGGcGtGGATGGCCTAAATAAgGAGCCCCCGGTTAcgAAgTGCCGCGGCGATTGGTGGAAgACAAGGCCTAGCCTAgGAAgcA-TcGCAgTcGCGCACGTcGTATCCCTTGAGGACTcGCAGGACCCTT-AGTT-GcTGGCCCTCACGGGGCGGCAAAACCGTTGCGACCCCAG?cacgtgtg-AgtggtgATTggtttTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCAATAGTCCTTGGGCGAGGTACCGTTTTCTGTGTTTCATTCCTAAAGACGGTACTGTTGTCCCTT-TAAATCGTTTGTTTCCGTCAGACATCCTT-CCGGG--TGTTCGGTGGACCCATGTAGCTGGGCCCGTGCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTTGGGCGTACGGTACCTAGTTGTGCCCCGGGATGCGGAATGTTGCGAGGGTATGGGCGTTCATTCGTCGCATACCCAGTAAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGCGCACGAGTTGACCTTCCCCGTCAAAAGGGAGGGCTCATGCGTGCCGGTGTCGAAcGAGGAGTgctacctggttgatcctgc???tgtgctagaactttGTCtcgtaaaCACAAAAGTaCTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAAGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGAGGATTCTATAGAGGGTGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCGAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGAGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGgAGGGattTTT----TTtt-------AACAagGAAattatctactcc??? Atriplex_joaquiniana1_BE12 ?CGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTAACATGAACGGGGGAGCGGCGAAAGCCCCTTCCCCATGTCGGGGCGGCGGTCCGCCTAGGCGGGACGCCGTGTC-GGCGCAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGGATACAAGCGTGCCCTTCCGCGGCCGGTTC--GCCGATCGTGGAGGCGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATgAAgAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTcCCCCC-ACCCCACCTCGCGTGG---GAGC-GGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAAGACAAGGCTTAGCCTAGGAAGCA-TCGcAgTCGCGCACGTCGTATCCCTTGAGGACTCGCARGACCCTT-AgTT-GCTGGCCcTcACGGggCGGcAAAACCGTTGCgACCCcAGTCacGtGAG-ag?ggtgattgGTTtttttggCtggcgggCTcCAtGCTtGTGCaTCGAACcGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCAATAGTCCTTGGGCGAGGTACCGTTTTCTGTGTTTCATTCCTAAAGACGGTACTGTTGTCCCTT-TAAATCGTTCGTTTCCGTCAGACATCCTT-CCGGG--TGTTCGGTGGACCCATGTAGCTGGGCCCGTGCTCCTACCTCAACGGCGAAAACCAAGCGTTGTTGGTTGGGCGTACGGTACCTAGTTGTGCCCCGGGATGCGGAATGTTGCGAGGGTATGGGCGTTCATTCGTCGCATACCCAGTAAAGCGTTTT-ACGCTAAGCACGAACGACGTCCGCGCACGAGTTGACcTTCCCCGTCAAAAGGgaGGgcTCATGCgTgccGGtGTCGAaC??????????????????????????tcttgtgctagaactttgtctcgtaaacacaaaaGTACtgtACGTGCTTTTTTgAAAaGAtTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAAGACGAAAAAGTTCTTTCTTTGATCTTACCAAAAGATTCTTCTATCTCACGAGGATTCTATAGAGGGTGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCGAAATCAAATTTCGATTCTATCTAAACGAATGGGGTGGAGG-ATAAGATAAAAAAATGCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGTTCCCTATGAGGGGAACTGAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAAtGAAAAATGCAAGCACGGTTtgGgGAGGGattttt----tttt-------aacaaggaaattatctactccatc Atriplex_hortensis1_667 TCGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATcATGAACGGGGACGGGGTGAAAGCCCCTTCCTCGAgCCGGGGAATCGCTCCGCCTTGGCGGGGCGTCCTCCTCAGCACAATAAcGAACCCCGGCGCGGTcTGCGCCAAGGAACATGAAtACAAGTGTGCCCTTCCGCaATCGGTTc--GCCGGTCGCGGACGTGGCACCAAGTcGTATATAACATTAAACGACTcTCGGCAAcGGATATcTCGGCTCTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCGAAgCCATTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTcTCCCCCC-aCC--aCCCCGTGTGG---ATG-GGGCGGAGGATgATGGCCTCCCATGCCTcACCGGGcGTGGATGGCCTAAATgAGGAGCCCCCGGTTACGAAgTGCCGCGGCGATAGGTGGAATACAAGGCCTAGCCTAGGACGAAATcGTGGTCGCGCACATcGTAgCTcTTGAGGACTCGCAgGACCCTT-ACTT-GTTTGCCCCT-AgGGGCGGCAAAACCGTTgCGACCCCAG?cacgtgtg?agtggtgattggttTTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCTATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TAAATCATTTGTTTCCGCCAGACATCCTT-CCGGG--TGTTCGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACTAAAACAAGGCGTTGATGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGAGGGAATGGACGTTGATTCGTCGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCTTCTTCTTCAAAGGAGAtGGCTCATGCGTGCCGGTGTCGAAcGAGGAGtgctacctggttgatcctgctcttgtgctagaactttGTCtCGtAAaCACAAAAGTACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCAAGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATAATTGATTATGAGACTGTCTAACTGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAAATTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGgTTTttCTTTtttT-------aACAaGGAaattaTctactccatc Atriplex_prostrata2_309 TCGAAACCTGCCCAGCAGAGCGACCAGAGAACATGTTTATcATGAACGGGGTCGGGGTGAAAGCCCCTTCCTCAAGCCGGGGAATCGCTCCGCCTTGGCGGGGTGTCCTTcCCGGCACAATAAcGAACCCCGGcGCGGTcTGcGCCAAGGAACATGAAtACAAGTGTGCCCCTCCgCGGTCGGTTc--GCCGGCCGTGGAAgTGGCaCCAAGTcGTATATAACATTAAACGACTcTcGGCAAcGGATATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCGAAgCCATTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCCAACC--aCCCCGCGTGG---ATT-GGGAGGAGGATgATGGCCTCCCATGCCTcACCGGGcGTGGATGGCCTAAATAAGGAGCCCCCGGTTACgAAgTGCCGCGGCGATTGGTGGAATACAAGGCCTAgCCTAgGACGAAATcGAAGTcGCGCACATcGTAgCTcTTGAGGACTCGCAgGACCCTA-ACTT-GTTTGCCCcT-AGGGGCGGCAAAACCGTTGCGACCCCAg?cacgtgtg?agtggtgattggtttttttgGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTTTTTGCTCCAAGTGCATTAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTTATTCCTACCGATGGTATTGTTTCCT----TAA-TCAATTGTTTCCGCCAAATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGAACCGTCCTCCAACCTCGACGGCGATAACAAGGCGTTGATGGTCAGGCGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGACGTTCATTCGTCGCATGCCCAATCAAGCGTTTA-ACGCTAAGCACGGACGACGTCTGCGTACGAGTTGACCCTCTCTGTCAAAAGGGAGGGCTCATGCGTGCCGGTgTCGAAcGAGGAGtgctacctggttgatcctgctCTTGTgCtagaaCTttgtctcgtaAACaCAAAAGTACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACCAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCAAGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAACTGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAAATTTA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGgTTTTtCTTtttTT-------AAcAaGgaaattatctactccatc Atriplex_prostrata1_204 TcGAAACCTGCCCAGCAGAGCGACCAGAGAACATGTTTaTcATGAACGGGGTCGGGGTGAAAGCCCCTTCCTCAAGCCGGGGAATCGCTCCGCCTTGGCGGGGYGTCCTTcCCGGCACAATAAcGAACCCCGGCGCGGTcTGCGCCAAGGAACATGAAtACAAGTGTGCCCCTCCgCgGTCGGTTc--GCCGGCCGTGGAAgTGGCaCCaAGTcGTATATAACATTAAACGACTcTCGGCAACGGATATcTCGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAAtTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCgAAgCCATTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCCAACC--aCCCCGCGTGG---ATT-GGGAGGAGGATgATGGCCTCCCATGCCTcACCGGGcGTGGATGGCCTAAATAAgGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGACGAAATcGAAGTcGCGCaCATcGTAgcTctTGAGGACTCGCAGGACCCTA-ACTT-GTTTGCCCcT-AGGGGCGGCAAAACCGTTgCGACCCCAGtcacgtgtg?agtggtgattggtttttttggctggcgggctccatgcttgtgcaTYGAACCgCACGCTGATAAACCTCTTCAGTTTTTGCTCCaAGTGCATTAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTTATTCCTACCGATGGTATTGTTTCCT----TAA-TCAATTGTTTCCGCCARATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGAACCGTCCTCCAACCTCGACGGCGATAACAAGGCGTTGATGGTCAGGCGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGGGGGAATGGACGTTCATTCGTCGCATGCCCAATCAAGCGTTTA-ACGCTAAGCACGGACGACGTCYGCGTACGAGTTGaCCCTCTCYGTCAAAAGGGAGGGcTCATgcgtgccggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaacacAAAagTACtgtACGTGCTTTTTTgaAgAGATTAGGtTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCAAGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAACTGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAAATTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAAtGAAAAATGCAAGCACGGTTtgGGGAGGGgtttttcttttttt-------aacaaggaaattatctactccatc Atriplex_rosea TCGAAaCCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGTAGGGGTGAAAGCCCCTTCCTCGAGCGGGGGAATCGCTTCGCCTCGGCGGGGTGTCCTCCCCGGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATCAATACAAGTGTGCCCTTCCGCAACCGGTTC--GCCGGTTGTGGGCGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGTAGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCATGTGTGG---AAG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCAATTGGTGGAATACAAGGCCTAGCCTAGGACGAAACGGTAGTCGTGCACATCGTAGCTGTTGAGGACTCGCAGGACCCTTT-CTT-GTTTGCCCCT-AGGGGCGGCAAAACCGTTGCGACCCcagtcacgtgtg-agtggtgattggtttttttggctggcgggctccaTGCTGGTGcatCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TAAATCATTTGTTTCCGCCAGATACCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGATGAAGACAAGGCGTTGATGGTCAGGTGTACGG-CTCTAGTTGTGCCCCGGGATGCAGAATGTTGACAGGGGATGGACGTTCATTCGTCGCATGCCCAATTTGGCGTTCT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTAAAAAGAGAtggctcatgcgtgccggtgtcgaacgaggagtgctacctg???????????tctTgtgctagaactttgtctcgtaaacacaaaagtACtgtACGTGCTTTTTTgaAgAGatTAGGtTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTTTATAAAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAAtGAAAAATGCAAGCACGGTTtgGGGAGGggTttttctttttt--------aacaaggaaattatctactccatc Atriplex_patula tCgAAaCCTGCCCaGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGACGGGGTGAAAGCCCCTTCCTCAAGCCGGGGAATCGCTCCGCCTTGGCGGGGCGTCCTCCTCAGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGAATACAAGTGTGCCCTTCCGCAATCGGTTC--GCCGGTCGCGGACGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCCCGGGTGG---ATG-GGGCGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATGAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATAGGTGGAATACAAGGCCTAGCCTAGGACGAAATCGTGGTCGCGCACATCGTAGCTCTTGAGGACTCGCAGGACCCTT-ACTT-GTTTGCCCCT-AGGGGCGGCAAAACCGTTGCGACCCCAGtcacgtgtggagtggtgattggtttttttggctggcgggctccatgctggtgcatcgaacCGcACGCTGAtAAACCTCTTCaGTGTTTGCTCCAAGTGCTATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TAAATCATTTGTTTCCGCCAGACATCCTT-CCGGG--TGTTCGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACTAAAACAAGGCGTTGATGGTCAGGTGTACGGTCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGAGGGAATGGACGTTGATTCGTCGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGaCCTTCTTcTTCAAAGGAGAtgGCTCATGcgtgccggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttgtctcgtaaacacaaaagTACtgtACGTGCTTTTTTgAAgAGatTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCAAGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAACTGAAATTGAAATTATATCGAAACGAA-----TGGGGG-ATAAGATAAAAAAATTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTtGGGGAGGGgTttttcttttttt-------aacaaggaaattatctactccatc Atriplex_leucoclada TCGAAACCTGCCCAgcAGAGCGaCCAgAGAACGTGTTTaTCATGAacGGGGTCGGGGTGAAAGCCCCTTCCTCAAgCCGGGGAATCgCTTCGCcTCGGCGGGGCGTCCTCCCCGGCACAATAACGAACCCCGGCgCGGTCTGCGCCAAGgAACATGAATACAAGCGTGCCcTTCCTCAATCGGTTC--GCCGGTYGTGGACGTGGCaCCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATgAAgAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCgAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCCCaCC--ACCCCGTGTGG---ATG-GGGAGGAgGATGATGGCCTCCCATGCCTCaCCGGGCGTGGATGGCCTAAATAAGGAgCCCCCGGTTACgAAgTgCCgCGgCRATTGGTGGAATACAAGGCCTAgCCTAgGATGAAgCGgTAgTCgCGCACATCGTAgCTcTTGAgGACTCgCAgGACCCTT-ACTT-GTcTgCCCCA-AGGGgCGGCAAAaCCGTTgCgaCCCCaG?????????????ggtga?????????TTGGCtGGcggGCTCCAtGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAgGTAAGGTTTTCTGTGTTTCATTCCTACYGACGGTATTGTTCCCC----TAAATCATTCGTTTCCGCCAGATATCCTT-CCGGG--TGTTCGGTGGACCATTGTAGCTGGATCCGTCCTCCAACCTCGACGACSAAAACAAGGCGTTGATGGTCAGGTGTACGGCTTCTAGTTGAGCCCCGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCGATTYGGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGCACGAGTTGACCCTCTCCCTCAAAAgAGATGGcTCATGCgTGCcGGtgTCGA????????????????????????????tCTTGTgctagaactttgtCTCGtAAACaCAAAAGTACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TCGGGG-ATAAGATAAAAAA-TTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAaGCACGGTTTGGGGAGGGgTTTTtCTTTTttt-------aacaaggaaattatctactcc??? Atriplex_amnicola TCGAAACCTGCCCAGCAGAGCGACCWGAGAACGTGTTTATCATGAACGGGGTTGGGGCGAAAGCCCCTTCCTCAGGCcGGGGAATCGCTTCGCCTCGGCGGGGCGTCCTCCCCGGCACAATAACAAACCCCGGCGCGGTCTGCGCCAAGGAACATGAATACAAGCGTGCCCTTCTGCAACCGGTTC--RTCGGtCGTGGACGTGGCACCAAGTCGTGTATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGACGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCYCCCCCACC--ACCTAGTGTGG---ATG-GGGAGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTATGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAgGATGAAACTGTAATCGCGCACATTGTATCTGTTGAGGACTCGCAGGACCCTT-ACTT-GTTTGCCCCT-AGGGGCGGCAAAACCGTTGCGACCCCAG?cacgtgtg-agtggtgattggtttttttgGCTggcgggctcCAtGCTTGtGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAASTSCGATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTTC----TAAATCATTTGTTTCCGCCAAATATCCTT-CCAGG--TGTTCGGYGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGRCGACGAAAACAAGGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCTGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAGAGATGGCTCAAGCGtGCCggtgtcgaacgaggagtgctacctggttgatcctgctcttgtgctagaactttGTCTcGTaaacacaaaagtactgtaCGTGCTTTTTTGAaGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACaGAGGaCGAAAAAGTTCtTTCTTTGATCTTACCaAGGGATTCTTCTATCtCaCGGGGATTTTATAGAAGGCGCaTTTGGTATTTGGATATTATTTGTATCCaTAATTTGTCCaATGATGAATGATTGATTATGAGACtGTCTAAATGAAATTGAAATTCtATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TTCa---TTCaTTTTTCTACTGAAATTTTTATGCaGTAAGGGTTGAATTCaTTGAGTATTCAACtTTGTTTGAGCtCCCtAGGAGGGGAACTAAGTTTGAAATGTATACaTAGGGAAAGCCGTGTGCaATGAAAAATGCaAGCaCGGTTTGGGGAGGGGTTTttCTTTTTttttttt--aacaaggaaattatctactccatc Atriplex_suberecta2_HF9 TCGAAaCCTgCcCAgcAGAGCGaCcAgAGAACGTgTTTaTCATGAACGGGGTAGGGGTGaAAgCCCCTTCCTCGAGCGGGGGAaTCgCTACGCcTCGGcGGGGcGTCcTCCCcAGCACAATAaCGAACCCCGGCGCGGTCTGCGCcAAGGAACATCAATACAAGTGTgCCCTTCCGCAACCGGTTC--GCCGGTCGCGGGCGTGGCACCAAGTCGTATACAACATTAAACGaCTCTCGGCAACGGATATCTCGGCTCTCGCATCGATgAAgAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTAGGTCGAGGGCACGCCTGCCTGGGCGTCaCGCATCGCGTCTCCCCCC-aCC--aCCATGTGTGG---AAG-GGGCAGAGGATGATGGCCTCCCACGCCTCaCCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTgCCGCGGCAATTGGTGGAATACAAGGCCTAGCCTAgGACGAAACGGTAGCCGTGCACATCGTAgCTgTTGAgGACTCGCAgGACCCTTT-CTT-GTTTGCCCCT-AgGGGCGGCAAAACCGTTgCGACCCCAG?cacgtg??gagtggtgattggtttttttgGCtggcgggctccatGCTTgTGCATCGAACcGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TCAATCATTTGTTTCCGCCAGATATCCTT-CCGGG--TGTTCGGTGGACCATTGTGGCTGGATCCGTCCCCCAACCTCGACGATGAAGACAAGGCGTTGATGGTCAGGTGTACGG-CTCTAGTTGTGCCCCGGGATGCAGAATGTTGACAGGGGATGGACGTTCCTTCGTCGCATGCCCAATTTGGCGTTCT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAGAgATGGATCaTGCGtGCcGGtgTCGAACGAGGAGTGCTACCTGGTT????????tcttgtGCtagaaCtttgtctcgtaaACaCAAAAgTaCtGTACGtGCTTTTTTGAAGaGaTTAGGTTCaGAATTTTTAGAAGAATTcTTTaCaGaGGacGAAAAAGTTcTTTcTTTGATcTTaCCaAGGGaTTcTTcTaTcTCaCGGGGaTTTTaTAGAAGGcgCaTTTGGtATTTGGaTATTATTTGtATCCaTAATTTgTCCaATGATGAATGATTGaTTaTGaGaCtGTcTAAAtGAAATTGAAATTcTATCGAAACGAA-----TGGGGG-aTAAGATAAAAAA-TTCa---TTCaTTTTTcTACTGAAAtTTTTaTGCaGTAAGAGTTGAATTCaTTGaGTaTTCAACTTTGTTTGAGCtCCCtAGGaGGGGAACTAAGTTTGAAAtGTATACATAGGGAAAGCCGTGTGCaATGAAAAAtGCaAGCaCGGTTTGGGGaGGGGTTTTtCTTTTTTTTTTttttaACAaGGAaatTatctactcc??? Atriplex_suberecta1_JeGr8 TCGAAACCTGCCCAgCAGAGCGACCAGAGAACGTGTTTATCATgAACgGGGTAGGGGTGAAAGCCCCTTCCTcGAgCGGGGGAATCGcTACGCCTCGGCGGGGCGTCCTCCCCAGCACAATAACGAACCCCGGCGCGGTcTGCGCCAAGGAACATCAATACAAGTGTGCCCTTCCGCAACCGGTTc--GCCGGTcGCGGGcGTGGCaCCAAGTcGTATACAACATTAAACGACTcTCGGCAACGGATATcTCGGCTcTcGCATCGATgAAgAACGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCgAAgCCATTAGGTcGAGGGCACGCCTGCCTGGGCGTCACGCATcGCGTcTCCCCCC-aCC--aCCATGTGTGG---AAg-GGGCGGAGGATgATGGCCTCCCACGCCTCACCGGGCGTGGATGGCCTAAATAAgGAgCCCCCGGTTACGAAgTGCCGCGGCAATTGGTGGAATACAAGGCCTAgCCTAgGACGAAACGGTAgCCGTGCACATcGTAgCTgTTgAGGACTCGCAgGACCcTTT-cTT-GtTTGCCCcT-AgGGGCAgCAAAaCCGTTGCGaCCCcAg?cacgtgtg-agtggtgattggtttTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAGGTAAGGTTTTCTGTATTTCATTCCTACTGACGGTATTGTTTTCC----TCAATCATTTGTTTCCGCCAGATATCCTT-CCGGG--TGTTCGGTGGACCATTGTGGCTGGATCCGTCCCCCAACCTCGACGATgAAgACAAGGCGTTGATGGTCAGGTGTACGG-CTCTAGTTGTGCCCCGGGATGCAgAATGTTGACAGGGGATGGACGTTCCTTCGTCGCATGCCCAATTTGGCGTTCT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAGAGAtGGCTCATGCGTGCCGGTGTCGAAcGAGGAGTgctacctggttgatcctgctcttgtgctagaactttgtctcgtaAACaCAAAAgTACtGTACGtGCTTTTTTGAAGaGaTTAGGTTcAGAATTTTTAGAAGAATTcTTTAGaGaGGaCGAAAAAGTTcTTTcTTTGATcTTACCaAGGGaTTcTTcTaTcTCaCGGGGaTTTTATAGAAGGcgCaTTTGGtATTTGGATATTATTTGtATCCatAATTTGTCCaATGATGAATGATTGATTaTGaGaCtGTcTAAATGAAATTGAAATTcTATCGAAACGAA-----TGGGGG-aTAAGATAAAAAA-TTCa---TTCaTTTTTcTACTGAAAtTTTTaTGCaGTAAGAGTTGAATTCaTTGaGTATTCAACTTTGTTTGAGCtCCCTAGGaGGGGAACTAAGTTTGAAAtGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCaCGGTTTGGGGAGGGGTTTTtCTTTTTTtttttTTTaACAaGGaaATTatctactcc??? Atriplex_cinerea TcGAAACCTGCCCAGCAGAgCGACCAGAGAACGTGTTTaTCATGAACGGGGTCGGGGCGAAAGCCCCTTCCTCA?GCCGGAGAATCGcTTcGCCTcGGCGGGGCGTcTTcCCCGGCACAATAAcGAACCCCGGCGCGGTcTGCGCCAAGGAACATGAAtACAAGCGTGCCCTTcTGCAACCGATTc--GTcGGTcGTGGATGTGGCACCAAGTCGTGTATAACATTAAACGACTCTcGGCAAcGGATATcTcGGCTCTCGCATCGATgAAgAAcGTAgCGAAATGCGATaCTTGGTGTgAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAgTTGcgCCCgAAGCCTTTAgGACGAgGGCACGCCTGCCTGGGCGTCACGCATCGCGTcTCCCCCCCaCC--aCCTCGTGTGG---ATG-GGgAAgAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTGAATAAGGAGCCCTcGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGATGAAACTGTAACCGCGCACATTGTAgCTGTCGAGGACTCGCAGGACCcTT-AcTT-GTTTGCCCcT-aGGGGcGGcaAAACCgTTGCgaCcccag????????????tggtgattggttttTTTGGCTGGCGGGCTCCAtGCTTGTGCATCGAACCGCACGCTGATAAACCTTTTCAGTGTTTGCTCCAACTGCGATAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTTC----TAAATCATTTGTTTCCGCCAAATATCCTT-CCGGG--TGTTCGGCGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACGAAAACAAGGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCTGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATTCAGCGTTTA-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAGAGATGGcTCAAGCGTGCCGGTgtCKAACgAGgagtgctacctggt-ga???????????????agaactTTGTCtcGTAAaCACAAAAGTACTGTACGTGCTTTTTTGAAGaGATTAGGTTCAGAATTTTTAGAAGAATTcTTTACaGaGGaCGAAAAAGTTcTTTcTTTGATcTTACCaAGGGaTTcTTcTaTCTCaCGGGGaTTTTATAGAAGGCGCaTTTGGTATTTGGATATTATTTGTATCCaTAATTTGTCCaATGATGAATGATTGATTaTGaGACtGTcTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TTCa---TTCaTTTTTcTACTGAAATTTTTATGCaGTAAGGGTTGAATTCaTTGaGTATTCAACTTTGTTTGAGCtCCCTAGGAGGGGAACTAAGTTTGAAAtGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCaCGGTTTGGGGAGGGGTTTTtCTTTTTTTTtttTt-AACAaGGAaattatctactcc??? Atriplex_rusbyi TcGAAaCCTgCCcAGcaGAGCGaCCAgaGAaCGTGTTTaTCATgAAcGGGGTcTGGgCGaAAgCCCCTTcCTCAAgCCgGGGAATCgCTTcgCCTCGGCGGTGcgTCcTcCCCGGcaCAATaacgaACCCCGGCgCgGTCtGCGCcAAGGAACATGAATACAAGCGTGCCcTTCCgCAACAggTTC--GCCTGTTGTGgAcGTgGCACCRAGTCGTATATAACATTAAaCGaCTCTCGGCAACGGATATCtCGGcTCTCGCATCgATgAAGAaCGTAGCGAAATGCGATaCTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCgCCCGAAGCCTTTAGGTCGAGGGcACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCCTGTGTGG---ATG-GGGAgGAgGATGATGgCCTCCCATGCCTCaCCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGcCTAGCCTAgGATgaAACGGTAATCGCGCACATTGTAgCTCTTGAgGACTCGCAgGaCCCTT-ACtT-GTTTgcCCTT-AgGGGCGGCAAAaCCGTTgCGaCCCCAG??????????????????????TTTTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATRAGCCTTGGGCGAGGTAAAGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TAAATCATTTGTTTCCgCCAGATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCAACGCCGAATRCAAGRCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCCGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTTGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTYCGCGTACGAGTTGACCCYCTCCCTCAAAAgAGATGGcTCaTGCGtGCcGGTgTCRAaCgAGGAGTGCTACCTGGTT????????tcttgtgctagaactttgtctcgtaAACACAAAAGTaCTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTCGAAGAATTCTTTACAGAKGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TGMA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGGTTttTCTTTTTtt-------aACAaGgAaaTTatctactccatc Atriplex_patagonica TCGAAACCTGCCCAgCAGAgCGACCAGAGAACGTGTTTATCATGAACGGGGTCTGGGCGAAAGCCCCTTCCTCAAGCCGGGGAATCGCTTCGCCTCGGCGGTGCGTCCTCCCCGGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGAATACAAGCGTGCCCTTCCGCAACAGGTTC--GCCTGTTGTGGACGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATgAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCCTGTGTGG---ATG-GGGAGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAgGATGAAACGGTAATCGCGCACATTGTAgCTgTTGAGGACTCGCARGACCCTT-ACTT-GTTTGCCCTT-ARGGGCGGCAAAACCGTTgCGACCCCAG?????????????????????????TTTTGGCTGGcGGgCTCcAtGCTTGTGCATCGAACcGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAGGTAAAGTTTTCTGTGTTTCATTCCTACTGACGGTATTGTTTTCC----TAAATCATTTGTTTCCGCCAGATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCAACGCCGAATACAAGGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCCGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTTGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAgAgATGGcTCaTGCGTGCcGgTGTCgAaCGAGGAGTGCTACCTGGTT????????tcttgtgctagaACTTtGTCtCgtaAACACAAAAATACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTCGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTTCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTCTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGgTTTttCTTTTTtt-------aACAaGGAaattatcTactcc??? Atriplex_peruviana tCGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGTCTGGGCGAAAGCCCGTTCCTCAAGCTAGGGAATCGCTCCGCCTCGGCGGGGCGTCCTCCCCGGCACAATAACGAACCCCGGCGCGGTCTGCgCCAAGGAACATGAAWACaAGCGTGCCCTTCCGCGATCGGTTT--GCCGGTCAAGGACGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCCCGTGTGG---ATG-GGGAGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGATGAAACGGTAATCGCGCACATCGTAGCTGTTGAGGACTCGCAgGACCCTT-ACTT-GTTTGCCCTT-AGGGGCGGCAAAACCGTtGCGaCCCCAG??????????????gtgattggtttttttggCaGGCgggctccaTGcttGTGcATcGAACCGCACGCtGATAAACcTCTtCAGTGTTTGCTCCAAGTGcGATAAgCCTTGGGcGAGGTAAAGTTTTctGTGTTTCATTCcTACtGAtGGtATtGTTTTCc----TAAAtCATTtGTATCCgCCAGATAtCCTT-CCGGG--TGTTtGGTGGaCCATTGTAGCtGGATCCGTCCCCCAACCTCGAcgaCAAATACAAGGCGTtGAtgGTYAGGTGTaCGGCCTCTAGTTGTgCCCcGGGATGCAGAATGTtGAGAGGGAATGGACGAtCATTcGTCgCATgCCCAATTCAGCGTTTt-aCGCtaaGcAcggACgACttYcGCGcacGAGttGAcCcTctC???????????????????????????????????????????????????????????????tcttgtgctagaactttgtctcgtaaaCAcaaaAGTaCTGTaCGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCGCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA-TTCA---TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTAAGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTtgGGGAGGGgttTTTCTTTtttt-------aacaaggaaattatctactccatc Atriplex_seren_seren TcGAAACCTGCCCAGcAGAGCGACCAGAGAACGTGTTTATcATGAACGGGGTcTGAGCGAAAGCTCATTcCTCAAGcTAgGGAGTTGcTTcGCCTcGGCGGGGCGTCCTCCCCGGCATAATAAcGAACCCCGGCGCGGTcTGcGCCAAGGAACATGAAtACAAGcGTGCCCTTCCGCGATCGGTTc--GCCGGTCAAGGAcGTGGCaCCAAGTcGTATATAACATTAAACGACTcTcGGCAAcGGATATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATCGAGTcTTTgAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCC--aCC--aCCCCGTGTGG---GTG-GGGAGGAgGATgATGGCCTCCCATGCCTcACCGGGcGTGGATGGCCTAAATAAgGAGCCCCCGGTTACgAAgTGCCGCGGCGATTGGTGGAATACAAGGCCTAgCCTGGGATGAAACGGTAATcGCGCACATcGTAgCTcTTGAGGACTCGCAgGACCCTT-ACTT-GTTTGCCCTT-AgGGGCGGCAAAACCGTTGCGACCCCAG??????????????????????????TTTGGCTGgCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGTGCGATAAGCCTTGGGCGAGGTAAAGTTTTCTGTGTTTCATTCCTACTGATGGtATTGTTTTCC----TAAATCATTCGTATCCGCCAGATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTTGACGACGAATACAACGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGCACGAGTTGACCCTCTCCCTTAAAGGAGATGGcTCATGCGTGCCGGTgtCgAaCga????????????????????????tcttgtgctagaactttGGCTCGTaaACACAAAAGTACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGAATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA--------TTCATTTTTCTACTGAAATTTTTATGCAGTAAAGGTTGAATTCATTGAGTATTCAACTTTGTTTCAGCTCCCTAGGAGGGGAACTACGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAaGCACGGTTTGGGgAGGGGTTTttCTttttTT-------aACAaGGAaaTTatctactcc??? Atriplex_phyllostegia1_H84 TCGAAACCTGCCCAGCAGagCGACCAGAGAACGTGTTTATAATGAACGGGGTCTGGGCGAAAGCCCCTTCCTCAAGCTAGGGAATCGCTTCGCCTCGGCAGGGCGTCCTCCCCGGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGAATACAAGCGTGCCCTTCCGCGACCGGTTC--GCCGGTTGTGGGCGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCTCGTGTGG---ATG-GGGAGGAGGATGATGGCCTCCCATGCCTCACCGGGCGTGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGATGAAACGGTAATCGCGCACATCGTAGCTCTTGAGGACTCGCAGGACCCTT-ACTT-GTTTGCCCTT-AGGGGCGGCAAAACCGTTGCgACCCCAGtcacgtgtggagtggtgattggtttttttggctggcgggctccaTGcttGTGcATcGAACCGCACGCTGAtAAACGTCTTCAGTGTTtGCTCCAAGtGTGGTAAGCCTtGRGCGAGGTAAGGTTTTCTGtGTTTCATTCCTACTAACGGTATtGTTTTCC----TAAATCATTTTTTTTCGCCAGATATCCTT-CCGGG--TTTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACGAGTACAAGGCGTTGATTGTCAGGTGTACGGCCTC-AGTTGTGCCCCGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATtCGGCGTTTT-ACGCtAAGCACGGACGACtTCCGTGCACGAGTTGACCtTCtCCCtCaAAGgAGATGGctCaTgCGtgccggtgtcgaacaaggagtgctacctg??????????????tgtgctagaactttgtctcgtaaacacaaaAGtactGTACGtGCTtttttGaAGAGAttaGGTtCAGAAtTtttaGAAGAAtTCTtTaCAGAGGACGAAAaAGTtCTttCTTtGATCTtacCaAGGGAtTCTTCTATCTCACGGGGAtTCTATAGAAGGCGCATttGGTAtTtGGATatTattTGtaTccaTAatttgtccaaTgAtgaATgaTtgAtTatgAgactgtCtAaatGaaattGAAAttCtaTCgaaacgaa-----TGGGGG-AGAAGATaaAaaA--------ttcAtttttCTACTGaaaTtTTTatgcagtaaGGGTTGAATTTATTGAGTATTCAACTTTGTTTGAGCTCCCtAGTAGGGGAACTACGTTTGAAATGtAtACATAGGGaaAGCCGTGTGCaATGAAAAATGCaAGCACGGTTTGGGgAGGGGTTTTtCtTTtttt-------aacaaggaaattatctactcc??? Atriplex_phyllostegia2_992 TCGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATAATGAACGGGGTCTGGGCGAAAGCCCCTTCCTCAAGCTAGGGAATCGCTTCGCCTCGGCGGGGTGTCCTCCCCGGCACAATAACGAACCCCGGCGCGGTCTGCGCCAAGGAACATGAATACAAGCGTGCCCTTCCGCGACCGGTTC--GCCGGTTGTGGGCGTGGCACCAAGTCGTATATAACATTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTAGGTCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCTCCCCCC-ACC--ACCTCGTGTGG---ATG-GGGAGGAGGATGATGGCCTCCCATGCCTCACCGGGCATGGATGGCCTAAATAAGGAGCCCCCGGTTACGAAGTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGATGAAACGGTAATCGCGCACATCGTAGCTCTTGAGGACTCGCAGGACCCTT-ACTT-GTTTGCCCTT-AGGGGCGGCAAAACCGTTGCgACCCCaGtcacgtgtggagtggtgattggtttttttGgCtGGCgGGctccatgcttgtGcAtcGAAcCGCACGCTGAtAAACGTCTTcAGTGtTTGCTCCAAGTGTGGTAAGCCTTGGGCGAGGTAAGGTTTTCTGTGTTTCATTCCTACTAACGGTATTGTTTTCC----TAAATCATTTCTTTTCGCCAGATATCCTT-CCGGG--TTTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACGAGTACAAGGCGTTGATTGTCAGGTGTACGGCCTC-AGTTGTGCCCCGGGATGCAGAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATTCGGCGTTTT-ACGCTAAGCACGGACGACTTCCGTGCACGAGTTGACCtTCtCCCtCaAAGgAGATGGcTcaTGCGtGCCggtgtcgaacaaggagtgctacctg???????????TCtTGTgCTAGAACTTTGTCTCGTAAACACAAAAGTACTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-AGAAGATAAAAAA--------TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTTATTGAGTATTCAACTTTGTTTGAGCTCCCTAGTAGGGGAACTACGTTTGAAATGTATACATAGGGAAAGCCGTGTGCaatGAAAAATGCaagcACggtttggggaggggtttt?ctttt?????????????????????????????????? Atriplex_watsonii TcGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATcATTAACGGGGCCTGGGCGAAAGCCCGTTCCTCAAgcTAgGGcATCGcTTcGCCTcGGCGGGGCGTCCTCCCCAGCACAATAAcGAACCCCGGCGCGGTcTGcGCCAAGGAACATGAAtACAAGCGTGCCCTTcTGCGACCGGTTT--GCCGGTCAAGGAcGTGGCACCAAGTcGTATATAACATTAAACGACTcTcGGCAAcGGATATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTgTGAATTGCAgAATcCCGTGAACCATcGAGTcTTTgAACGCAAGTTGCGCCCgAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCC-aCC--aCCCCGTGTGG---ATG-GGGAGGAGGATgATGGCCTcCCATGCCTcACCGGGcGTGGATGGCCTAAATAAgGAGCCCCCGGTTACgAAgTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAgGATgAAACGGTAATcGCGCACGTTGTAGCTcTTGAGGACTCGCTGGACCCTT-ACTT-GTTTGCCCTT-AGGGGCGGCAAAACCGTTgCGACCCCAG?cacgtgtg-agtggtgattggtttTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAGTGTTTGCTCCAAGAGCGATAAGCCTTGGGCGAGGTAAAGTTTTCTGTGTTTCATTCCTACTGATGGTATTGCTTTCC----TAAATCATTTGTATCCGCCAGATATCCTT-CCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCTCCAACCTCGACGACgAATACAAGGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATTCAGCGTTTT-ACGCTAAGCACGGACGACTTTCGCGCACGAGTTGACCCTCTCCCTCAAAGGAGATGGCTCATGCGtgCCGGTGTCGAACGAGgAgtgctacctggttgatcctgctcttgtgctagAACTTtGTCtCgtaaACACAAAAGTaCTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATGTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACGGTCTAAATGAAATTGAAATTCTATCGAAACGAG-----TGGGGG-ATAAGATAAAAAA--------TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAACTCCCTAGGAGGGGAACTACGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGgTTTttCTTTTTtt-------aACAaGGaaATtatctactccatc Atriplex_lentiformis2_520 TcGAAACCTGCCCAGCAGAGCGACCAGAGAACGTGTTTATCATGAACGGGGTCGGGGCGAAAGCCCCTTCCTCAAGCCGGGGAATCAcTTCGCCTcGGCGGGGcGTCCTCCCCGGCACAATAAcGAACCCCGGcGCGGTcTGcGCCAAGGAACATGAAtACAAGCGTGCCCTTCCGCAACCGGTTc--GCCGGTcGCGGACGTGGCaCCAAGTcGTATATAACATTAAACGACTcTcGGCAAcGGATATcTcGGCTcTcGcATCGATgAAgAAcGTAgCGAAATGCGATACTTGGTGTGAATTGCAgAATCCCGTGAACCATcGAGTcTTTgAACGCAAGTTGCGCCCGAAGCCTTTAGGTcGAGGGCACGCCTGCCTGGGcGTCACGCATcGcGTcTCCCCCC-aCC--aCCCCATGTGG---ATG-GGGAGGAGGATgATGGCCTCCCATGCCTcACCGGGcGtGGATGGCCTAAATAAGGAGCCCCCGGTTAcgAAgTGCCGCGGCGATTGGTGGAATACAAGGCCTAGCCTAGGATGAAACGGTAATcGcGCACATcGTAgCTcTTGAGGACTCGCAgGACCCTT-ACTT-GTTTGCCCTT-AGGGGCGGcATAACCGTTGCGACCCCAG?cacgtgtg-agtggtgattggtttTTTTGGCTGGCGGGCTCCATGCTTGTGCATCGAACCGCACGCTGATAAACCTCTTCAATGTTTGCTCCAAGTGCGGTAAGCCTTGGGCGAGGTAAAGTTTTCTGTGTTTCATTCCTAYCGATGGTATTGTTTTCC----TAAATCATTTGTTTCCGCCAAATATCCTTTCCGGG--TGTTTGGTGGACCATTGTAGCTGGATCCGTCCCCCAACCTCGACGACgAATACAAGGCGTTGATGGTCAGGTGTACGGCCTCTAGTTGTGCCCCGGGATGCAgAATGTTGAGAGGGAATGGACGTTCATTCGTCGCATGCCCAATCCAGCGTTTT-ACGCTAAGCACGGACGACTTCCGCGTACGAGTTGACCCTCTCCCTCAAAAGAGAtGGCTCATGCGTGCCGGTgTCGAAcGAGGAGtgctacctggttgatcctgctcttgtgctagaactttGtCtcgtaaACACAAAAGTaCTGTACGTGCTTTTTTGAAGAGATTAGGTTCAGAATTTTTAGAAGAATTCTTTACAGAGGACGAAAAAGTTCTTTCTTTGATCTTACCAAGGGATTCTTCTATCTCACGGGGATTCTATAGAAGGCGCATTTGGTATTTGGATATTATTTGTATCCATAATTTGTCCAATGATGAATGATTGATTATGAGACTGTCTAAATGAAATTGAAATTCTATCGAAACGAA-----TGGGGG-ATAAGATAAAAAA--------TTCATTTTTCTACTGAAATTTTTATGCAGTAAGGGTTGAATTCATTGAGTATTCAACTTTGTTTGAGCTCCCTAGGAGGGGAACTACGTTTGAAATGTATACATAGGGAAAGCCGTGTGCAATGAAAAATGCAaGCACGGTTTGGGGAGGGgTTTTtCTTtttTT-------AACaAGGaaattatctactcc??? ; END; BEGIN LABELS; CHARGROUPLABEL ITS; CHARGROUPLABEL ETS; CHARGROUPLABEL Default; CHARGROUPLABEL trnK; END; BEGIN SETS; CHARSET ITS = 1 - 634; CHARSET ETS = 635 - 1096; CHARSET trnK = 1097 - 1588; CHARSET ambiguous = 106 - 113 184 - 188 404 - 405 422 - 429 542 - 548 589 - 591 604 - 607 789 - 802 828 - 830 989 - 990 1545 - 1564; CHARSET full_combo = 1 - 1588; CHARSET ITS_ETS = 1 - 1096; TAXSET full_combo = 1 - 34; TAXSET ITS_ETS = 1 - 34; TAXSET ITS = 1 - 34; TAXSET ETS = 1 - 34; TAXSET 3trnK = 1 - 34; TAXSET ident_ITS = 13 18 23; TAXSET ident_ETS = 9 18 23 28; TAXSET ident_3trnK = 6 8 - 9 15 23 31; CHARPARTITION ITS_ETS = ITS : 1 - 634, ETS : 635 - 1096, Default : 1097 - 1588; CHARPARTITION ITS_trnK = ITS : 1 - 634, Default : 635 - 1096, trnK : 1097 - 1588; CHARPARTITION ETS_trnK = Default : 1 - 634, ETS : 635 - 1096, trnK : 1097 - 1588; CHARPARTITION ITS_ETS_trnK = ITS : 1 - 634, ETS : 635 - 1096, trnK : 1097 - 1588; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1588; END; BEGIN TREES; Title 'ZachariasAmAtripliceaeTrees_Treebase'; LINK Taxa = Taxa; TRANSLATE 1 Chenopodium_album, 2 Chenopodium_murale, 3 Atriplex_pleiantha, 4 Atriplex_suckleyi2_H95_UC, 5 Atriplex_covillei1_811, 6 Atriplex_covillei2_953, 7 Holmbergia_tweedii1_H89, 8 Holmbergia_tweedii2_H17, 9 Grayia_spinosa1_566, 10 Grayia_spinosa2_1019, 11 Zuckia_brandegeei_brandegeei_H38, 12 Zuckia_brandegeei_arizonica2_H78_9115, 13 Zuckia_brandegeei_plummeri, 14 Atriplex_californica3_1025, 15 Atriplex_joaquiniana2_306, 16 Atriplex_joaquiniana1_BE12, 17 Atriplex_hortensis1_667, 18 Atriplex_prostrata2_309, 19 Atriplex_prostrata1_204, 20 Atriplex_rosea, 21 Atriplex_patula, 22 Atriplex_leucoclada, 23 Atriplex_amnicola, 24 Atriplex_suberecta2_HF9, 25 Atriplex_suberecta1_JeGr8, 26 Atriplex_cinerea, 27 Atriplex_rusbyi, 28 Atriplex_patagonica, 29 Atriplex_peruviana, 30 Atriplex_seren_seren, 31 Atriplex_phyllostegia1_H84, 32 Atriplex_phyllostegia2_992, 33 Atriplex_watsonii, 34 Atriplex_lentiformis2_520; TREE 'MP_ITS_ETS_1' = (1,2,((3,(((4,(5,6)),(((9,10),(11,(12,13))),(14,(15,16)))),(7,8))),(((17,21),((20,(24,25)),(22,((23,26),(((27,28),(((29,30),33),(31,32))),34))))),(18,19))))[% ] [%unrooted = on ]; TREE 'MP_ITS_ETS_2' = (1,2,((3,(((4,(5,6)),((((9,10),11),(12,13)),(14,(15,16)))),(7,8))),(((17,21),((20,(24,25)),(22,((23,26),(((27,28),(((29,30),33),(31,32))),34))))),(18,19))))[% ] [%unrooted = on ]; TREE 'MP_trnK_1' = (1,2,(((3,(((5,6),(9,10,13),11,12),14,(15,16))),(4,7,8)),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_2' = (1,2,(((3,(((5,6),(9,10,13),11,12),(14,(15,16)))),(4,7,8)),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_3' = (1,2,(((3,(4,7,8)),((5,6),(9,10,13),11,12,(14,(15,16)))),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_4' = (1,2,((3,(4,7,8),((5,6),(9,10,13),11,12,(14,(15,16)))),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_5' = (1,2,((((3,4),7,8),((5,6),(9,10,13),11,12,(14,(15,16)))),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_6' = (1,2,(((3,(4,(7,8))),((5,6),(9,10,13),11,12,(14,(15,16)))),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_7' = (1,2,(((3,4),((5,6),(9,10,13),11,12,(14,(15,16))),(7,8)),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'MP_trnK_8' = (1,2,((((3,4),(7,8)),((5,6),(9,10,13),11,12,(14,(15,16)))),((17,18,19,21),(20,23,(24,25),26),22,(27,28),29,(30,(31,32),33,34))))[% ] [%unrooted = on ]; TREE 'ML_ITS_ETS_trnK' = (1,2,((3,((4,(7,8)),((5,6),((((9,10),11),(12,13)),(14,(15,16)))))),(((17,21),((20,(24,25)),(22,((23,26),((27,28),((((29,30),33),(31,32)),34)))))),(18,19))))[% ] [%unrooted = on ]; TREE 'MP_ITS_ETS_trnK_1' = (1,2,(3,((7,8),((4[%selected = on ],(5,6)),((14,(15,16)),((12,13),(11,(9,10))))))),((18,19),((17,21),((20,(24,25)),(22,((23,26),(34,((27,28),((31,32),(33,(29,30)))))))))))[% ] [%unrooted = on ] [%unrooted = on ] [% setBetweenBits = selected ]; TREE 'MP_ITS_ETS_trnK_2' = (1,2,(3,((7,8),((4[%selected = on ],(5,6)),((14,(15,16)),((12,13),(11,(9,10))))))),((18,19),((17,21),((20,(24,25)),(22,((23,26),((27,28),(34,((31,32),(33,(29,30)))))))))))[% ] [%unrooted = on ] [%unrooted = on ] [% setBetweenBits = selected ]; TREE 'MP_ITS_ETS_trnK_3' = (1,2,(3,((7,8),((4,(5,6)),((14,(15,16)),((11,(12,13)),(9,10)))))),((18,19),((17,21),((20,(24,25)),(22,((23,26),(34,((27,28),((31,32),(33,(29,30)))))))))))[% ] [%unrooted = on ] [%unrooted = on ] [% setBetweenBits = selected ]; TREE 'MP_ITS_ETS_trnK_4' = (1,2,(3,((7,8),((4,(5,6)),((14,(15,16)),((11,(12,13)),(9,10)))))),((18,19),((17,21),((20,(24,25)),(22,((23,26),((27,28),(34,((31,32),(33,(29,30)))))))))))[% ] [%unrooted = on ] [%unrooted = on ] [% setBetweenBits = selected ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1588; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1588; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1270667377458; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4505730143812145228; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2330450196561098080; checksumv 0 2 1420383621 null numChars 1588 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 1168687.0 NumFiles 1 NumMatrices 1; endTell; getWindow; tell It; suppress; setResourcesState false false 328; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1032 1096; setLocation 722 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4505730143812145228 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4505730143812145228; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 227; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 704 1029; setLocation 722 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4505730143812145228 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1440.1270666998701.6872051461469592367; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 704 1029; setLocation 722 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientRight; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2330450196561098080 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 232; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 704 1029; setLocation 722 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;