#NEXUS [MacClade 4.08 registered to Jean Burns, Washington University in St. Louis] BEGIN DATA; DIMENSIONS NTAX=20 NCHAR=461; FORMAT DATATYPE=DNA MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Commelina_purpurea CCCCTTTTTNNNNNGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGCCGCCTCCGAAACGCACGTAACTTTTTGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTTNNGCGTCCCCCACGNCGCTGNACGATTGACCTTTAGGTCCATCGTGGATTTTCGGGNNCCCNAAAATAGGCCGTTTCGGACCGTTACGGGCACCTTTTCCGTTATCGGTNNNCTCCCCGCCGCGCCGGAGCCGCCACCGCCACCGCCACCGCCACCGCCACCGNNNNNNNNCCACTGGAGGAGNNGAATGCCCCGCTTTTNCGTTATCGGNNNNNNNNNNTCCNTTGCGCCGTAGNNCGCATCGNNNNNACGGTTTCAGCTTCGAGCACTATCGCGGTCGCACGCGCCGAGAGCACAGANTTTATGCATTTTGAGGCGTTGGGACTTNCGGG [461] Commelina_fluviatilis CCCCTTTTTNNNNNGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACGCCGCCTCCGAAACGCACGTAACTTTATGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGTCCCCCACGNCGCTGNAAGAATGACCTTTAGGTCCATCGTGGATTTTCGGGNNCCCNAAAATAGGCCGTTTCGGACCGTTACGGGCACCTTTTTCGTTGTCGGTNNNCTCCCCGCCGAGCCATAGCCGCCGCCGCCACCGCCACCGCCTCCGTCACCGNNNNNNNNCCACCGAAGGAGNNGAATTCTTCCCTTTTNCGAAGTGGGGCCCGCTAGACCCNTTTCTCCGTAGNNCGCATCGNNNNNACGGTTTCAGCTTCGAGCACTATCACGATCGTACGCACCGAGAGCACAAANTTTATGCATTCTGAGGCGTTGGGACTTNCGGG [461] Commelina_virginica CCCCCTTTTTGTTCGGCTCGCNNNNNNNNNNNNNNNNNNNGTTGTNNNAATCACCGAGACGGAAACGTACCTAACTTTTTGCTCGGGCGCCGGANACGGGGCGTGCGACCCCAATTCGGAGAGCTCGTCNNGCGGGCCCCACCNCCTTGCACGATTGACCGTTAGGTCGATCGTGGCGTTCCGGGNNGCCCGAAATTGGCCGTTTCGCACAACTTCGGGCACCTTTTTGCTTCGCGGCGCNCCGCTTTTACCGCCGACGGCGTCGGAACCGGCGGCNNNNNNNCGGCCGCCGGCCATCGACCGTCGGAATCGGTAGAGGCGTCGCTATNNNGGCGCGGGGCCCGCTTGCTCCNACGTGCCGCGGNNNNCGGCGNNNNNNNNNNNNNAGGTNCGAGCGCCGCCGCGTTCGNNNNGAACGAGAGCACTGANNNNNTACATTTTGAGGCGTTGCGACTTNCGGG [461] Commelina_diffusa CCCTCTTTTNNNNNGCCGCGTNNNNNNNNNNNNNNNNNNNGCTGCNNNACTCGCCGCCGCCGAAACGTGCGTAACTTTTCGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCAACGNCGCTGCGCGATTGACCTCTAGGTCCATCGTGGCGTTTTCGGNNGCTTGAAATTGGTCGTTTCGGACCGTTACGCACACATTTTTCGTTCTCAGTNNNCTCCCCNNNNNGTCNNNNNNNNNNNNNNNNCCGGAGCCGCCACCGCCACCGNNNNNNNNCCTCCTGAGAAGGNAAAGGCGTCGGTTTCNTGACGTGGGGCCCGCTAGATCCNCCGCGCCGCAGNNCGTAGCGNNNNNGNGGATANAGCTGCGAGCACTGTCGCTTCCGCACGGATCTAGAGCGCAAANTATATCCGTTACGAGGCGTTGGTCCTTNCGGG [461] Commelina_coelestis CCCCTTTTTNNNNNGTCCCGTNNNNNNNNNNNNNNNNNNNGTTGCNNNACTAACCGCCGCCAAAACGTACGTAACTTTTTGATAGGGCGTCGGANACGGGGCGTGCGACAAATAAGCTGCGAGCACNNTNNATCGCATTCGTANCGGATCGAGAGCNACAAATATATGTATTCTGATGCGTTGGGNNGCTNNNNNNNNNTCGTGTGCGATCANTACCAGCGCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN [461] Commelina_diffusa_1 CCCTCTTTTNNNNNGCCGCGTNNNNNNNNNNNNNNNNNNNGCTGCNNNACTCGCCGCCGCCGAAACGTGCGTAACTTTTCGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCAACGNCGCAGCACGATTGACCTTTAGGTCCATCGTGGCGTTTTCGGNNGCTCAAAATTGGCCGTTTCGGACCGTTACGCGCACATTTTTCGTTCTCAGTNNNCTCCCCNNNNNGTCNNNNNNNNNNNNNNNNCCGGAGCCGCCACCGCCACCGNNNNNNNNCCTCCTGAGAAGGNAAAGGCGTCGGTTTCNTGACGTGGGGCCCGCTAGATCCNCCGCGCCGCAGNNCGTAGCGNNNNNGCGGATANAGCTGCGAGCACTGTCGCTTCCGCACGGATCTAGAGCGCAAANTATATCCGTTACGAGGCGTTGGTCCTTNCGGG [461] Commelina_africana_var._villosior_1 CCCCTTTTTNNNNNGCCACGCNNNNNNNNNNNNNNNNNNNGTTGCNNNGCTCGCCGCAGTCGAAACGTACGCAACTTTTTGCTCGAGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCAGCACGATTGACCTTTAGATCCATCGTGGCGTTTTTGGNNGCCCAAAATAGGTCGTTTCGGACCGTTTCGCGCACCTTTTTCGTTCTCAGTNNNCTCCCCAAAATGCCGGAGCCGGANNNNNNGCCGGAGCCGGAGCCGCCACCGNNNNNNNNCCGTCGGAGAAGNNGAAGCCGTCACTTTTNTGACGTGGGGCCCGTTTGATCCNCCGCGCCGTAGNNCGTAGCGNNNNNGAGAATANAGACTCGAGCACTTTCGCGGCCGTGCGGATCGAGAGCACAAAATATATGCATTCTTAGGCATTGGGACTTNCGGG [461] Commelina_communis_1 CCCCTTTTTNNNNNGCCNNNNNNNNNTTATNNNNNNNNNNGCTGCNNNACTCGCTGCAGCCGAAACATTCGTAGCTTTTCGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCGCAACGNTGTTGCACGATTGACCTTTAGGTCGATCGTGGTGTTTTCGGNNGCCCGAAATTGGTCGTTTCGCACCATTACGGGCACCTTTTTCGTTCTCGGCNNNCTCGCCGTCACGCCGNNNNNNNNNNNNNNNNNNGAGCCGNNNNNNCCACCGNNNNNNNNCCACCNNNNNNGNNGAAGGCGTCGCTTTTTCGAAGTGGGACCCGCTATGTCCNTCGCGCCGTAGNNCGTAGCGNNNNNTCGAATANAGCTGCGAGCACTACCACATTCCTACCGATCGAGAGCACAAANTATATGCATTCCGAGGAGTTGGGACTTNCGGG [461] Commelina_diffusa_6 CCCTCTTTTNNNNNGCCGCGTNNNNNNNNNNNNNNNNNNNGCTGCNNNACTCGCCGCCGCCGAAACGTGCGTAACTTTTCGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCAACGNCGCTGCGCGATTGACCTCTAGGTCCATCGTGGCGTTTTCGGNNGCTTGAAATTGGTCGTTTCGGACCGTTACGCACACATTTTTCGTTCTCAGTNNNCTCCCCNNNNNGTCNNNNNNNNNNNNNNNNCCGGAGCCGCCACCGCCACCGNNNNNNNNCCTCCTGAGAAGGNAAAGGCGTCGGTTTCNTGACGTGGGGCCCGCTAGATCCNCCGCGCCGCAGNNCGTAGCGNNNNNGNGGATANAGCTGCGAGCACTGTCGCTTCCGCACGGATCTAGAGCGCAAANTATATCCGTTACGAGGCGTTGGTCCTTNCGGG [461] Commelina_sp. CCCCTTTTTNNNNNCCCGCTTNNNNNNNNNNNNNNNNNNNGTTCCNNNACTCGCAGTCGCCGAAACGTACGCAACTTTTTGCTCGGGCATCAGANACGGGGCGTGCGACCCCAATTCAGAAACCTCGTCNNGCGGCCCCCACGNCACTGCACGATTGACCTTTAGGTCCATCGTGGCATTTTCGGNNGCCCTAAATAGGTCGTTTCGGACCGTTACGTGCACCTTTTTTGTTCTCGGTNNNCTCCCTGTCACGCCNNNNNNNNNNNNNNNNNNGGAGCAGGAGCCGGAGCCGNNNNNNNNCCGCCGACACCGNNGAAAGGGTCGCATTTCNGAAGTGGGACCCGCTAGATCCNCCGCGCTGTAGGCTGTAGCGTAGCAGCAAATANGGCCGTGAGCATTATCGCATTCGTACGGACCGAGAGCACAAANTATATGCACTCCGAGGCATTGGGGCTTTCGGG [461] Commelina_congesta CCCCTTTTTTGTTCGGTTCGCNNNNNNNNNNNNNNNNNNNATTGTNNNGATCACCGAGACGGGAACGTACCTAACTTTTTGCTCGTTAGCCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGCCNNGCGGGCCCCACGNCCGTGCACGATTGACCGTTAGGTCCATCGTGGCGTTTTCGGNNGCCCGAAACCGGCCGTTTCGGACGACTTCGGGCACCGTTTTGCTTCGGGGCGCNCCGGTTTTTCCGCCGCCGTCGTCGTAACCGTCCGCNNNNNNNCGGCCGNNNNNNNNNNNNNNTCGCAACCGGTAGAGCCGTCGCTATNNNGACGTGGGGCCCGCTTGATCCNACGTGCCGCGGNNNNCAGCANNNNNNNNNNNNNAGGTNCGAGCGCCGCCGCGTTCGNNNNAAACGAGAGCACAAANNNNNTAAATTTCGAGGCGTTGGGACTTNTGGG [461] Commelina_welwitschii CCCCTTTTTNNNNNGCCGCGCNNNNNNNNNNNNNNNNNNNGTTGCNNNGCACACCGCCTCNGAAACGCACGTAACTTTTTGCTCGGGCGTCGGANACGGGGCGTGCGACCCTAATTCGGAAAGCTCGTCNNGCGTCCCCCACGNCGATGCACGATTGACCTTTAGGTCGATCGTGGCATTTCGGGNNCCCCAGAAAAGGCCGTTTCGGACCGTTACGGGCACCTTTTTCGTTATCGGTNNNCTCCCCGTCACGCCGTAGACGGAGCCTCCACCGCCACCGCCACCGCCACCGNNNNNNNNCCACCGTAGGAGNNGAAGGCATCGCTTTTNCAAAGTGGGCCCCGCTAGACCCNTTGCGCCGCAGNNCGTAGCGNNNNNGCGGNNNNNNNNNNNNNCGCTATCGCAATCGTACGCACCGAGAGCACAGANTATATGCATTTCGAGGCATTAGGCCTTNCGGG [461] Commelina_diffusa_2 CCCCTTTATNNNNNGCCGCGCNNNNNNNNNNNNNNNNNNNGCTGCNNNACTCGCCGCCGCCGAAACGTGCGTAACTTTTCGCTCGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCAACGNCGCTGCACGATTGACCTTTAGGTCCATCGTGGCGTTTTCGGNNGCCCGAAATTGGCCGTTTCGGACCGTTACGTGCATATTTTTCGTTCCCGATNNNCTCCCCNNNNNGTCGCNNNNNNNNNNNNNGCCGGAGCCGCCACCGCCACCGNNNNNNNNCTTCCCGAGAAGNNAAAGGCGTCGGTTTCNTGACGTGGGGCCCGCTAGATCCNCCGCGCCGCAGNNCGTAGCGNNNNNGCGGATANAGCTGCGAGCACTGTCGCTTCCGCACGGATCTAGAGCGCAAANTATATGCGTTACGAGGCGTTGGTCCTTNCGGG [461] Commelina_dianthifolia CCCCTTTTTNNNNNGCCGAGTNNNNNNNNNNNNNNNNNNNGTTGCNNNGCTCACCATCGCAGAAACGTACGCAACTTTTTGCTCGTGCATCGGANACGGAGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCTGCACGATTAACCTTTAGGTCGATCGTGGCATTTTCGGNNGCCCCAAATAGGTCATTTCGGACCGTTACGTGCACCTTTTTCGTTCTCGGTNNNCTGCCTGTCACGTCNNNNNNNNNNNNNNNNNNGGAGCCGGAGCCGGAGCCGNNNNNNNNNNNNNGAGAANGNNGAAAGCGTCATTTTTTTGAAGTGGGGCTCGTTAGATCCNCCGTGCAATAGNNTGTNNNNNNNNNNNNNNTANAGCTGCGAGCACTATCGCGTTCGTACGGATCGAGAGCACAAANTATATGCATTCTGAGGCGTTGGGGCTTNCGGG [461] Commelina_capitata CCCCTTTTTNNNNNGGCGCGCNNNNNNNNNNNNNNNNNNNGTTGTNNNGGTCACTACGGCGGAAGCGTACTTAACTTCTAGCTCGGGTGTCGGANACGGGGCGTGAGGCCCCAATTCGGAAAGCTCGACNNGCGGGCCCCTGGNTGCTGCACGATTGACCCTTAGGTCGATCGTGGCATTTTCGGNNACCCTAAATCGGCCGTTTCGCACGACTTCGGAAACCNTTTTGGGCCGTGGCGGATTTTTTTTAGCGCCGACGCCACCGGAAAAGGAGAAAGGGGAACGGAGAACGGAGAACGGAGACCGGAATCGGTGAAGACGTCGCTGTNNNGGCGTGGGGCCCGCTCGCTCCNACGGGTCGTGGNNNNCGGCGNNNNNNNNNNNNNAGGTNTGAGCACTGTCGGGTTCGNNNNGAACGAGAGAACAAANNNNNTACGATCCGAGGCGTTGGGACTTNTGGG [461] Commelina_africana_var._villosior_2 CCCCTTTTTNNNNNGCCACGCNNNNNNNNNNNNNNNNNNNGTTACNNNGCTCGCCGCAGTCGAAACGTACGCAACTTTTTGCTCGAGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCAGCACGATTGACCTTTAGGTCCATCGTGGCGTTTTCGGNNGCCCAAAATAGGTCGTTTCGGACCGTTTCGCGCACCTTTTTCGTTCTCAGTNNNCTCCCCAAAATGCCGGAGCCGAANNNNNNGCCGGAGCCGGAGCCGCCACCGNNNNNNNNCCGTCGGAGAAGNNGAAGCCGTCCCTTTCNTGATGTAGGGCCCGTTAGATCCNCCGCGCCGTAGNNCGTAGTGNNNNNGGGAATANAGACTCGAGCAATTTCGCGGTCGTGCGGATCGAGAGCACAAATTATATGCATTCTGAGGCATTGGGACTTNCGGG [461] Commelina_communis_2 CCCCTTTTTNNNNNGCCGCGCTGCTCTTATTCTCTCGTTCGTTGTNNNACACGCCGCAGCNAGAACGCTCGTAACTCTTAGCACGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCTACACGATTGACCGCTAGGTCGATCGTGGCATTTTCGGNNGCCCCAAATAGGTCGTTTCGGACCGTTACGGGCACCTTTTTCGTTCTCGGTNNNCTCCCCGTCACACCGCANNNNNNNNNNNNGACGGAGCCGNNNNNNCCACCGNNNNNNNNCCACCGCCACCGNNGAAGGCGTCGCTTTTNCGAAGTGGGACCCGCTATGTCCNTCGCGCCGTAGNNCGTAGCGNNNNNTCGAATANAGCTGCGAGCACTACCGCATTCCTACCGATCGAGAGCACAAANTATATGCATTCCGAGGAGTTGGGACTTNCGGG [461] Commelina_communis_4 CCCCTTTTTNNNNNGCCGCGCTGCTCTTATTCGCTTGTTCGTTGTNNNACTCGCTGCAGCNAGAACATTCGTAACTCTTAGCACGGGCGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCTACACGATTGACCGCTAGGTCGATCGTGGCATTTTCGGNNGCCCCAAATAGGTCGTTTCGGACCGTTACCGGCACCTTTTTCGTTCCCGGTNNNCTCCCCGTCACGCCGTANNNNNNNNNNNNGACGGAGCCGNNNNNNCCACCGNNNNNNNNCCACCGGAGAAGNNGAAAGCCGGGCTTTTNTGACGTGGGACCCGCTAGATCAATTAGGCGGTAGNNCATAGCGNNNNNTCGAATANGGCTACGAGCACTACAGCATTCCTGCCGATCGAGACCACAAANTGTATGCATTCCGAGGCGTTGGGTCTTNCGGG [461] Commelina_communis_3 CCCCTTTTTNNNNNACCGCACTGCTTTTATTCGCTCGTTTGTTGTTGCATCCACCGCCGCNGGAACGTACGTAACTTTTGGCACGGGTGTCGGANACGGGGCGTGCGACCCCAATTCGGAAAGCTCGTCNNGCGGCCCCCACGNCGCTGCACGATTGACCGTTAGGTCCATCGTGGCATTTTTCGNNGCCCCAAATAGGTCATTTCGGACCGTTACGAGCCCCTTTTTCGTTCTCGGTNNNCTCCCCGTCACGCCGCANNNNNNNNNNNNGACGGAGCCGTCACCGCCACCGNNNNNNNNCCACCGGAGAAGNNGAAGGCGTCGCTTTTNCGAAGTGGGACCCGCTAGATCCNCCGCGCCATAGNNCATAGCGNNNNNTCGAATANAGCTGCGAGCACTACCGTATTCCTACCGATCGAGAGCACAAANTATATGCGTTCTGAGGCGTTAGGACTTNTGGG [461] Commelina_schliebenii CCCCTCTCTTTTTCTTCGGATTTTTTTTTCNNNNNNNNNNGTCGTCGGGCCTACGACGCCCGCTCCGTATGCTTAGTCTGCACCGGGCGAAAAATACGAGCCGCNTGATCTCNGTTCTGGGAGCAAATTCGGTGGCGGCGATATCGAAATCCCCTCGGGTTGCACCTCCCTGGTGTTAGAGTGCGTCGCTGCATTCGGATCCTTTATAAGAATTTAACGCGCTTATGCTGATGGGTGCGATCATACCAGCACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN [461] ; END; BEGIN PAUP; delete Commelina_schliebenii; END; BEGIN TREES; [! >Data file = Commelina2_5S_Fig3 >Heuristic search settings: > Optimality criterion = likelihood > Likelihood settings: > User-specified substitution rate matrix = > - 2.798300 6.049300 2.234300 > 2.798300 - 1.438300 4.052200 > 6.049300 1.438300 - 1.000000 > 2.234300 4.052200 1.000000 - > Assumed nucleotide frequencies (set by user): > A=0.18460 C=0.28670 G=0.28010 T=0.24860 > Among-site rate variation: > Assumed proportion of invariable sites = none > Distribution of rates at variable sites = gamma (discrete approximation) > Shape parameter (alpha) = 2.0204 > Number of rate categories = 4 > Representation of average rate for each category = mean > These settings correspond to the GTR+G model > Number of distinct data patterns under this model = 298 > Molecular clock not enforced > Starting branch lengths obtained using Rogers-Swofford approximation method > Trees with approximate likelihoods 5% or further from the target score are rejected > without additional iteration > Branch-length optimization = one-dimensional Newton-Raphson with pass limit=20, > delta=1e-06 > -ln L (unconstrained) = unavailable due to missing-data and/or ambiguities > Starting tree(s) obtained via stepwise addition > Addition sequence: random > Number of replicates = 1 > Starting seed = 1728156839 > Number of trees held at each step during stepwise addition = 1 > Branch-swapping algorithm: tree-bisection-reconnection (TBR) > Steepest descent option not in effect > Initial 'MaxTrees' setting = 100 > Branches collapsed (creating polytomies) if branch length is less than or equal to 1e-08 > 'MulTrees' option in effect > Topological constraints not enforced > Trees are unrooted > >Heuristic search completed > Total number of rearrangements tried = 1769 > Score of best tree(s) found = 3069.83553 > Number of trees retained = 1 > Time used = 55.53 sec ] TRANSLATE 1 Commelina_purpurea, 2 Commelina_fluviatilis, 3 Commelina_virginica, 4 Commelina_diffusa, 5 Commelina_coelestis, 6 Commelina_diffusa_1, 7 Commelina_africana_var._villosior_1, 8 Commelina_communis_1, 9 Commelina_diffusa_6, 10 Commelina_sp., 11 Commelina_congesta, 12 Commelina_welwitschii, 13 Commelina_diffusa_2, 14 Commelina_dianthifolia, 15 Commelina_capitata, 16 Commelina_africana_var._villosior_2, 17 Commelina_communis_2, 18 Commelina_communis_4, 19 Commelina_communis_3, 20 Commelina_schliebenii ; TREE PAUP_1 = [&R] (1,2,(((((((3,11),15),(7,16)),(10,14)),(((4,9),6),13)),(8,((17,18),19))),12)); END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1-461; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; END; BEGIN MacClade; Version 4.0 87; LastModified -1011026627; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '0' '24' Geneva '9' '100' '1' all; EditorPosition '46' '6' '963' '1611'; TreeWindowPosition '46' '6' '981' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '399' 000; ListWindow Taxa closed Geneva '9' '50' '10' '257' '360' 100000000; ListWindow Trees closed Geneva '9' '50' '25' '129' '379' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ChartWindowPosition '52' '30' '968' '1620'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data; OtherSymbols &/ 00 ?-; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '2'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '851' '46' '115' '165'; TreeToolsPosition '866' '9' '126' '138'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' (normal) 0010; NexusOptions '0' '0' '50' 001011001; TipLabel '1'; TreeFont Geneva '9' (normal); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '83' '115' '13' '45' '116' '148' '13' '45' '149' '181' '13' '45' '182' '214' '13' '45' '221' '77' '0' '0' '480' '614' '492' '35' '534' '35' '534' '367' '24' '35' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '8' '8' '0' '2' 0100110000000000010100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 00; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END;